Multiple sequence alignment - TraesCS2D01G428500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G428500 chr2D 100.000 4233 0 0 1 4233 540196932 540201164 0.000000e+00 7817
1 TraesCS2D01G428500 chr2B 94.665 2062 66 10 1 2037 645306689 645308731 0.000000e+00 3158
2 TraesCS2D01G428500 chr2B 90.269 1079 61 19 2338 3383 645308954 645310021 0.000000e+00 1371
3 TraesCS2D01G428500 chr2B 90.821 207 17 2 2039 2245 645308764 645308968 4.170000e-70 276
4 TraesCS2D01G428500 chr2B 74.900 502 105 15 3630 4121 786248451 786247961 4.290000e-50 209
5 TraesCS2D01G428500 chr2B 97.260 73 2 0 2260 2332 275303489 275303561 1.600000e-24 124
6 TraesCS2D01G428500 chr2A 88.785 214 24 0 932 1145 683632940 683633153 3.250000e-66 263
7 TraesCS2D01G428500 chr1B 76.483 489 109 6 3630 4115 421433151 421433636 1.170000e-65 261
8 TraesCS2D01G428500 chr1B 95.181 83 4 0 2250 2332 187709461 187709379 9.550000e-27 132
9 TraesCS2D01G428500 chr4B 75.869 489 112 6 3630 4115 659363325 659362840 1.180000e-60 244
10 TraesCS2D01G428500 chr4A 74.651 501 125 2 3630 4129 742307697 742307198 1.980000e-53 220
11 TraesCS2D01G428500 chr4A 98.630 73 1 0 2260 2332 566298858 566298930 3.430000e-26 130
12 TraesCS2D01G428500 chr1D 74.125 514 126 7 3619 4129 58542536 58542027 5.550000e-49 206
13 TraesCS2D01G428500 chr1D 97.183 71 2 0 2260 2330 104386181 104386111 2.070000e-23 121
14 TraesCS2D01G428500 chr7B 80.093 216 39 4 3656 3869 270190939 270190726 1.580000e-34 158
15 TraesCS2D01G428500 chr7B 98.592 71 1 0 2260 2330 107922930 107922860 4.440000e-25 126
16 TraesCS2D01G428500 chr3D 98.667 75 1 0 2260 2334 557724848 557724922 2.660000e-27 134
17 TraesCS2D01G428500 chr6B 98.630 73 1 0 2260 2332 512465978 512466050 3.430000e-26 130
18 TraesCS2D01G428500 chr7A 97.333 75 2 0 2260 2334 365107596 365107670 1.240000e-25 128
19 TraesCS2D01G428500 chr3B 98.571 70 1 0 2260 2329 491378248 491378179 1.600000e-24 124


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G428500 chr2D 540196932 540201164 4232 False 7817.000000 7817 100.000000 1 4233 1 chr2D.!!$F1 4232
1 TraesCS2D01G428500 chr2B 645306689 645310021 3332 False 1601.666667 3158 91.918333 1 3383 3 chr2B.!!$F2 3382
2 TraesCS2D01G428500 chr1D 58542027 58542536 509 True 206.000000 206 74.125000 3619 4129 1 chr1D.!!$R1 510

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
763 765 0.246635 TGGAAGCGCTTAGAGTCACC 59.753 55.0 25.11 18.21 0.00 4.02 F
1245 1269 0.036010 AGTCAGAGGAAACCATGCCG 60.036 55.0 0.00 0.00 0.00 5.69 F
2327 2383 0.031414 TCCTAGGAGGCTGGGGTTAC 60.031 60.0 7.62 0.00 34.61 2.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2308 2364 0.031414 GTAACCCCAGCCTCCTAGGA 60.031 60.0 11.98 11.98 37.67 2.94 R
3193 3280 0.036732 GCCTCTGATGTGGTGTTCCA 59.963 55.0 0.00 0.00 42.05 3.53 R
3774 3861 0.030235 TCCTTATGATCACGGCGTCG 59.970 55.0 10.85 8.42 43.02 5.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 7.201785 CCAACCCGCACTAATAATTGAAACTAT 60.202 37.037 0.00 0.00 0.00 2.12
39 40 8.833493 ACCCGCACTAATAATTGAAACTATAAC 58.167 33.333 0.00 0.00 0.00 1.89
88 89 6.454186 GCAACTTCACAATCGGCATTTATTTC 60.454 38.462 0.00 0.00 0.00 2.17
114 115 2.333417 GCAGTCGTGTCTCCTCCGA 61.333 63.158 0.00 0.00 0.00 4.55
227 228 4.277423 GCTAGAAAAGTAGTGCCAAACCAA 59.723 41.667 0.00 0.00 0.00 3.67
231 232 7.354751 AGAAAAGTAGTGCCAAACCAAAATA 57.645 32.000 0.00 0.00 0.00 1.40
259 260 5.695851 ACTTTACTTTGCAGGATCAAGTG 57.304 39.130 10.33 0.00 0.00 3.16
304 305 2.995939 TCAGTGCGAAGATAAAGTGCTG 59.004 45.455 0.00 0.00 0.00 4.41
353 354 8.599792 AGATCCAAAAATTGTTGAATGAAGGAT 58.400 29.630 10.09 2.15 33.97 3.24
371 372 5.458041 AGGATGATAATTGCCCAAAATCG 57.542 39.130 0.00 0.00 0.00 3.34
383 384 2.230266 CCCAAAATCGTTTCAATCGGGT 59.770 45.455 0.00 0.00 0.00 5.28
397 398 6.288941 TCAATCGGGTCATAAAGTAGTTGA 57.711 37.500 0.00 0.00 0.00 3.18
398 399 6.703319 TCAATCGGGTCATAAAGTAGTTGAA 58.297 36.000 0.00 0.00 0.00 2.69
400 401 7.279981 TCAATCGGGTCATAAAGTAGTTGAATG 59.720 37.037 1.20 1.20 0.00 2.67
423 424 6.724263 TGTTTTAATAATAGAGGCACATGCG 58.276 36.000 0.00 0.00 43.26 4.73
452 453 2.095853 GCATCAATTGTACCTGTGACCG 59.904 50.000 5.13 0.00 0.00 4.79
462 463 4.263572 TGTGACCGGGCCCTTGTG 62.264 66.667 22.43 8.12 0.00 3.33
538 539 5.295292 CCTACATATTGAGCACCAGAACTTG 59.705 44.000 0.00 0.00 0.00 3.16
577 578 3.359695 TGCAGGTGGGAATACTTAACC 57.640 47.619 0.00 0.00 0.00 2.85
626 628 1.228245 TTGCCAGGTCCAGCACTTC 60.228 57.895 6.12 0.00 39.10 3.01
637 639 1.808945 CCAGCACTTCCATGTCTGAAC 59.191 52.381 0.00 0.00 0.00 3.18
638 640 2.551721 CCAGCACTTCCATGTCTGAACT 60.552 50.000 0.00 0.00 0.00 3.01
639 641 2.740981 CAGCACTTCCATGTCTGAACTC 59.259 50.000 0.00 0.00 0.00 3.01
640 642 2.369860 AGCACTTCCATGTCTGAACTCA 59.630 45.455 0.00 0.00 0.00 3.41
641 643 3.141398 GCACTTCCATGTCTGAACTCAA 58.859 45.455 0.00 0.00 0.00 3.02
642 644 3.565482 GCACTTCCATGTCTGAACTCAAA 59.435 43.478 0.00 0.00 0.00 2.69
643 645 4.036734 GCACTTCCATGTCTGAACTCAAAA 59.963 41.667 0.00 0.00 0.00 2.44
644 646 5.755813 CACTTCCATGTCTGAACTCAAAAG 58.244 41.667 0.00 0.00 0.00 2.27
645 647 4.276926 ACTTCCATGTCTGAACTCAAAAGC 59.723 41.667 0.00 0.00 0.00 3.51
656 658 2.031870 ACTCAAAAGCCCACAAACCTC 58.968 47.619 0.00 0.00 0.00 3.85
685 687 4.200092 TCGATTCAGCTCAGCTCTAGTTA 58.800 43.478 0.00 0.00 36.40 2.24
716 718 2.588877 GCCATCGCGTACAGCCAT 60.589 61.111 5.77 0.00 44.76 4.40
717 719 2.885676 GCCATCGCGTACAGCCATG 61.886 63.158 5.77 0.00 42.89 3.66
718 720 1.227234 CCATCGCGTACAGCCATGA 60.227 57.895 5.77 4.41 45.52 3.07
719 721 0.809636 CCATCGCGTACAGCCATGAA 60.810 55.000 5.77 0.00 45.52 2.57
720 722 0.578683 CATCGCGTACAGCCATGAAG 59.421 55.000 5.77 0.00 45.52 3.02
721 723 0.530650 ATCGCGTACAGCCATGAAGG 60.531 55.000 5.77 0.00 44.76 3.46
758 760 2.688507 TCAGTTTGGAAGCGCTTAGAG 58.311 47.619 25.11 9.07 0.00 2.43
763 765 0.246635 TGGAAGCGCTTAGAGTCACC 59.753 55.000 25.11 18.21 0.00 4.02
801 803 4.801891 CATTTCCATGAGTTTGTGTCCAG 58.198 43.478 0.00 0.00 31.07 3.86
836 838 3.055530 CCTCTCCAAGTGTACAGCAGATT 60.056 47.826 0.00 0.00 0.00 2.40
838 840 5.337571 CCTCTCCAAGTGTACAGCAGATTTA 60.338 44.000 0.00 0.00 0.00 1.40
894 896 2.879756 GCAATCCTTTGGTAGTCCAGCA 60.880 50.000 0.00 0.00 45.22 4.41
927 951 0.667487 TTGCTCTGAAGAACCTCGCG 60.667 55.000 0.00 0.00 0.00 5.87
1122 1146 0.603065 ACTTCAAAAATGCTCGGGCC 59.397 50.000 3.94 0.00 37.74 5.80
1133 1157 2.525629 TCGGGCCAACACTGAGGA 60.526 61.111 4.39 0.00 0.00 3.71
1245 1269 0.036010 AGTCAGAGGAAACCATGCCG 60.036 55.000 0.00 0.00 0.00 5.69
1251 1275 0.899717 AGGAAACCATGCCGCACAAT 60.900 50.000 0.00 0.00 0.00 2.71
1356 1380 3.072944 AGTTTGCAGCTCTCTTGTCATC 58.927 45.455 0.00 0.00 0.00 2.92
1368 1392 4.533707 TCTCTTGTCATCACCATCTTCCTT 59.466 41.667 0.00 0.00 0.00 3.36
1377 1401 5.197224 TCACCATCTTCCTTTGGATTGAT 57.803 39.130 0.00 0.00 36.79 2.57
1381 1405 5.206587 CCATCTTCCTTTGGATTGATTCCT 58.793 41.667 0.00 0.00 45.68 3.36
1407 1431 5.178797 GCAAGGCATCTACTGAAGAGTAAA 58.821 41.667 0.00 0.00 37.74 2.01
1464 1488 4.266976 GCAGTATCATCATTTGCAAACTGC 59.733 41.667 24.60 24.60 42.40 4.40
1504 1528 6.913873 ATGATAGCATGGCAATTTTCAAAC 57.086 33.333 0.00 0.00 32.31 2.93
1566 1590 2.493675 TGTAGGCAACACTTTGTTTGCA 59.506 40.909 8.44 0.00 38.77 4.08
1603 1627 2.091665 AGCATATGGACCTTGGGAAAGG 60.092 50.000 4.56 2.93 45.46 3.11
1626 1650 0.172352 GCAGCAGAGAAGAGTACGCT 59.828 55.000 0.00 0.00 0.00 5.07
1675 1699 2.497273 GGATACAGGCATTTGCAACCTT 59.503 45.455 0.00 0.00 44.36 3.50
1690 1714 7.994425 TTGCAACCTTATAAGAATTCTGTCA 57.006 32.000 14.28 0.00 0.00 3.58
1707 1731 4.136796 CTGTCAAATTGGTTCTGACTGGA 58.863 43.478 8.31 0.00 40.14 3.86
1806 1830 3.561725 GGTTCCAGAAATTGATAGGCTCG 59.438 47.826 0.00 0.00 0.00 5.03
1822 1846 3.114616 CGCTGTTCCAGAGTGCCG 61.115 66.667 0.00 0.00 32.44 5.69
1852 1876 3.120321 ACGCTGGTGAAACTGTCATTA 57.880 42.857 0.00 0.00 38.90 1.90
1898 1922 5.626543 CGATTATGGTGATATTTGCACTTGC 59.373 40.000 0.00 0.00 42.50 4.01
1914 1938 2.578021 ACTTGCCATGTGAGTATCCCTT 59.422 45.455 0.00 0.00 0.00 3.95
1915 1939 3.780294 ACTTGCCATGTGAGTATCCCTTA 59.220 43.478 0.00 0.00 0.00 2.69
1916 1940 4.227300 ACTTGCCATGTGAGTATCCCTTAA 59.773 41.667 0.00 0.00 0.00 1.85
1917 1941 5.103940 ACTTGCCATGTGAGTATCCCTTAAT 60.104 40.000 0.00 0.00 0.00 1.40
1958 1982 9.413048 CAATAGCATACTTAGGTTAGCTCTTAC 57.587 37.037 7.05 0.00 36.36 2.34
1968 1992 4.036971 AGGTTAGCTCTTACTGATAGCACG 59.963 45.833 0.00 0.00 38.75 5.34
1991 2015 6.492429 ACGTATTACCTGGAGCAATATGACTA 59.508 38.462 18.01 0.00 0.00 2.59
2033 2059 8.196771 AGTTATTTTGCATGACTTTCTGAACAA 58.803 29.630 0.00 0.00 0.00 2.83
2037 2063 5.112220 TGCATGACTTTCTGAACAATGAC 57.888 39.130 0.00 0.00 0.00 3.06
2039 2065 5.067544 TGCATGACTTTCTGAACAATGACAA 59.932 36.000 0.00 0.00 0.00 3.18
2041 2067 7.040548 TGCATGACTTTCTGAACAATGACAATA 60.041 33.333 0.00 0.00 0.00 1.90
2042 2068 7.809331 GCATGACTTTCTGAACAATGACAATAA 59.191 33.333 0.00 0.00 0.00 1.40
2060 2116 9.409312 TGACAATAACAAAACAGCATAAATCTG 57.591 29.630 0.00 0.00 37.56 2.90
2061 2117 9.624697 GACAATAACAAAACAGCATAAATCTGA 57.375 29.630 0.00 0.00 35.61 3.27
2062 2118 9.979578 ACAATAACAAAACAGCATAAATCTGAA 57.020 25.926 0.00 0.00 35.61 3.02
2064 2120 8.986477 ATAACAAAACAGCATAAATCTGAACC 57.014 30.769 0.00 0.00 35.61 3.62
2066 2122 6.815089 ACAAAACAGCATAAATCTGAACCAA 58.185 32.000 0.00 0.00 35.61 3.67
2067 2123 6.925165 ACAAAACAGCATAAATCTGAACCAAG 59.075 34.615 0.00 0.00 35.61 3.61
2068 2124 6.899393 AAACAGCATAAATCTGAACCAAGA 57.101 33.333 0.00 0.00 35.61 3.02
2070 2126 6.690194 ACAGCATAAATCTGAACCAAGATC 57.310 37.500 0.00 0.00 35.83 2.75
2073 2129 7.177216 ACAGCATAAATCTGAACCAAGATCAAA 59.823 33.333 0.00 0.00 35.83 2.69
2074 2130 8.195436 CAGCATAAATCTGAACCAAGATCAAAT 58.805 33.333 0.00 0.00 35.83 2.32
2075 2131 8.411683 AGCATAAATCTGAACCAAGATCAAATC 58.588 33.333 0.00 0.00 35.83 2.17
2083 2139 6.542821 TGAACCAAGATCAAATCTGTACCTT 58.457 36.000 0.00 0.00 40.13 3.50
2096 2152 9.613428 CAAATCTGTACCTTAATTATGGTCTGA 57.387 33.333 22.60 20.47 37.74 3.27
2106 2162 7.066284 CCTTAATTATGGTCTGAAGTGGACAAG 59.934 40.741 8.87 0.00 35.61 3.16
2107 2163 5.762179 ATTATGGTCTGAAGTGGACAAGA 57.238 39.130 0.00 0.00 35.61 3.02
2116 2172 5.717178 TCTGAAGTGGACAAGAGCTATTACT 59.283 40.000 0.00 0.00 0.00 2.24
2161 2217 6.484643 AGTTATCATAGCTTGCAACATACCAG 59.515 38.462 0.00 0.00 0.00 4.00
2214 2270 6.764308 AATAACACATTAGCAGCTGAACAT 57.236 33.333 20.43 1.59 0.00 2.71
2216 2272 2.163010 ACACATTAGCAGCTGAACATGC 59.837 45.455 20.43 0.47 42.87 4.06
2236 2292 7.630082 ACATGCCTTATTCTACTAGACCAAAA 58.370 34.615 0.00 0.00 0.00 2.44
2240 2296 9.609346 TGCCTTATTCTACTAGACCAAAATAAC 57.391 33.333 0.00 0.00 0.00 1.89
2271 2327 9.639601 AAAATCGGGAAATTCAAAGATCTTTAC 57.360 29.630 20.07 7.90 0.00 2.01
2272 2328 6.417191 TCGGGAAATTCAAAGATCTTTACG 57.583 37.500 20.07 9.54 0.00 3.18
2273 2329 5.935789 TCGGGAAATTCAAAGATCTTTACGT 59.064 36.000 20.07 6.49 0.00 3.57
2274 2330 6.428771 TCGGGAAATTCAAAGATCTTTACGTT 59.571 34.615 20.07 11.74 0.00 3.99
2275 2331 7.040961 TCGGGAAATTCAAAGATCTTTACGTTT 60.041 33.333 20.07 18.20 0.00 3.60
2276 2332 7.270579 CGGGAAATTCAAAGATCTTTACGTTTC 59.729 37.037 25.07 25.07 31.65 2.78
2277 2333 8.079809 GGGAAATTCAAAGATCTTTACGTTTCA 58.920 33.333 29.03 12.54 32.71 2.69
2278 2334 9.626045 GGAAATTCAAAGATCTTTACGTTTCAT 57.374 29.630 29.03 14.02 32.71 2.57
2281 2337 7.851822 TTCAAAGATCTTTACGTTTCATTGC 57.148 32.000 20.07 0.00 0.00 3.56
2282 2338 6.964908 TCAAAGATCTTTACGTTTCATTGCA 58.035 32.000 20.07 0.00 0.00 4.08
2283 2339 7.592938 TCAAAGATCTTTACGTTTCATTGCAT 58.407 30.769 20.07 0.00 0.00 3.96
2284 2340 8.081633 TCAAAGATCTTTACGTTTCATTGCATT 58.918 29.630 20.07 0.00 0.00 3.56
2285 2341 7.801547 AAGATCTTTACGTTTCATTGCATTG 57.198 32.000 0.88 2.08 0.00 2.82
2286 2342 7.144722 AGATCTTTACGTTTCATTGCATTGA 57.855 32.000 7.19 7.19 0.00 2.57
2287 2343 7.592938 AGATCTTTACGTTTCATTGCATTGAA 58.407 30.769 17.74 17.74 33.89 2.69
2288 2344 7.752239 AGATCTTTACGTTTCATTGCATTGAAG 59.248 33.333 19.96 13.89 36.97 3.02
2289 2345 6.964908 TCTTTACGTTTCATTGCATTGAAGA 58.035 32.000 19.96 11.72 36.97 2.87
2290 2346 7.077605 TCTTTACGTTTCATTGCATTGAAGAG 58.922 34.615 19.96 19.01 36.97 2.85
2291 2347 6.552859 TTACGTTTCATTGCATTGAAGAGA 57.447 33.333 19.96 7.02 36.97 3.10
2292 2348 5.437289 ACGTTTCATTGCATTGAAGAGAA 57.563 34.783 19.96 6.71 36.97 2.87
2293 2349 5.455392 ACGTTTCATTGCATTGAAGAGAAG 58.545 37.500 19.96 12.56 36.97 2.85
2294 2350 4.855388 CGTTTCATTGCATTGAAGAGAAGG 59.145 41.667 19.96 10.22 36.97 3.46
2295 2351 5.166398 GTTTCATTGCATTGAAGAGAAGGG 58.834 41.667 19.96 0.00 36.97 3.95
2296 2352 4.305539 TCATTGCATTGAAGAGAAGGGA 57.694 40.909 8.80 0.00 0.00 4.20
2297 2353 4.863548 TCATTGCATTGAAGAGAAGGGAT 58.136 39.130 8.80 0.00 0.00 3.85
2298 2354 6.005066 TCATTGCATTGAAGAGAAGGGATA 57.995 37.500 8.80 0.00 0.00 2.59
2299 2355 6.060136 TCATTGCATTGAAGAGAAGGGATAG 58.940 40.000 8.80 0.00 0.00 2.08
2300 2356 5.441718 TTGCATTGAAGAGAAGGGATAGT 57.558 39.130 0.00 0.00 0.00 2.12
2301 2357 6.560003 TTGCATTGAAGAGAAGGGATAGTA 57.440 37.500 0.00 0.00 0.00 1.82
2302 2358 5.918608 TGCATTGAAGAGAAGGGATAGTAC 58.081 41.667 0.00 0.00 0.00 2.73
2303 2359 5.425217 TGCATTGAAGAGAAGGGATAGTACA 59.575 40.000 0.00 0.00 0.00 2.90
2304 2360 6.070251 TGCATTGAAGAGAAGGGATAGTACAA 60.070 38.462 0.00 0.00 0.00 2.41
2305 2361 6.995091 GCATTGAAGAGAAGGGATAGTACAAT 59.005 38.462 0.00 0.00 0.00 2.71
2306 2362 7.172361 GCATTGAAGAGAAGGGATAGTACAATC 59.828 40.741 0.00 0.00 0.00 2.67
2307 2363 6.732896 TGAAGAGAAGGGATAGTACAATCC 57.267 41.667 0.00 0.00 44.14 3.01
2308 2364 6.444704 TGAAGAGAAGGGATAGTACAATCCT 58.555 40.000 0.00 0.00 44.27 3.24
2309 2365 6.551601 TGAAGAGAAGGGATAGTACAATCCTC 59.448 42.308 0.00 0.00 44.27 3.71
2310 2366 5.399113 AGAGAAGGGATAGTACAATCCTCC 58.601 45.833 0.00 0.00 44.27 4.30
2311 2367 5.137082 AGAGAAGGGATAGTACAATCCTCCT 59.863 44.000 0.00 0.00 44.27 3.69
2312 2368 6.335850 AGAGAAGGGATAGTACAATCCTCCTA 59.664 42.308 0.00 0.00 44.27 2.94
2313 2369 6.557568 AGAAGGGATAGTACAATCCTCCTAG 58.442 44.000 0.00 0.00 44.27 3.02
2314 2370 5.278127 AGGGATAGTACAATCCTCCTAGG 57.722 47.826 0.82 0.82 44.27 3.02
2324 2380 2.699496 CTCCTAGGAGGCTGGGGT 59.301 66.667 28.68 0.00 38.51 4.95
2325 2381 1.003573 CTCCTAGGAGGCTGGGGTT 59.996 63.158 28.68 0.00 38.51 4.11
2326 2382 0.264955 CTCCTAGGAGGCTGGGGTTA 59.735 60.000 28.68 0.00 38.51 2.85
2327 2383 0.031414 TCCTAGGAGGCTGGGGTTAC 60.031 60.000 7.62 0.00 34.61 2.50
2328 2384 0.326238 CCTAGGAGGCTGGGGTTACA 60.326 60.000 1.05 0.00 0.00 2.41
2329 2385 1.580059 CTAGGAGGCTGGGGTTACAA 58.420 55.000 0.00 0.00 0.00 2.41
2330 2386 1.913419 CTAGGAGGCTGGGGTTACAAA 59.087 52.381 0.00 0.00 0.00 2.83
2331 2387 0.698818 AGGAGGCTGGGGTTACAAAG 59.301 55.000 0.00 0.00 0.00 2.77
2332 2388 0.696501 GGAGGCTGGGGTTACAAAGA 59.303 55.000 0.00 0.00 0.00 2.52
2333 2389 1.285078 GGAGGCTGGGGTTACAAAGAT 59.715 52.381 0.00 0.00 0.00 2.40
2334 2390 2.644676 GAGGCTGGGGTTACAAAGATC 58.355 52.381 0.00 0.00 0.00 2.75
2335 2391 1.992557 AGGCTGGGGTTACAAAGATCA 59.007 47.619 0.00 0.00 0.00 2.92
2336 2392 2.378547 AGGCTGGGGTTACAAAGATCAA 59.621 45.455 0.00 0.00 0.00 2.57
2337 2393 3.161866 GGCTGGGGTTACAAAGATCAAA 58.838 45.455 0.00 0.00 0.00 2.69
2338 2394 3.056821 GGCTGGGGTTACAAAGATCAAAC 60.057 47.826 0.00 0.00 0.00 2.93
2339 2395 3.056821 GCTGGGGTTACAAAGATCAAACC 60.057 47.826 0.00 0.74 40.56 3.27
2340 2396 4.148838 CTGGGGTTACAAAGATCAAACCA 58.851 43.478 12.81 0.00 42.61 3.67
2341 2397 4.547671 TGGGGTTACAAAGATCAAACCAA 58.452 39.130 12.81 0.00 42.61 3.67
2342 2398 4.962995 TGGGGTTACAAAGATCAAACCAAA 59.037 37.500 12.81 2.28 42.61 3.28
2343 2399 5.425539 TGGGGTTACAAAGATCAAACCAAAA 59.574 36.000 12.81 0.57 42.61 2.44
2344 2400 6.100424 TGGGGTTACAAAGATCAAACCAAAAT 59.900 34.615 12.81 0.00 42.61 1.82
2345 2401 7.290248 TGGGGTTACAAAGATCAAACCAAAATA 59.710 33.333 12.81 0.00 42.61 1.40
2346 2402 8.151596 GGGGTTACAAAGATCAAACCAAAATAA 58.848 33.333 12.81 0.00 42.61 1.40
2347 2403 9.203421 GGGTTACAAAGATCAAACCAAAATAAG 57.797 33.333 12.81 0.00 42.61 1.73
2361 2417 9.883142 AAACCAAAATAAGAAATTGTTCACTCA 57.117 25.926 0.00 0.00 36.09 3.41
2371 2427 7.999679 AGAAATTGTTCACTCAAAACTGATGA 58.000 30.769 0.00 0.00 36.09 2.92
2381 2437 4.641396 TCAAAACTGATGACACACCTAGG 58.359 43.478 7.41 7.41 0.00 3.02
2395 2451 4.278170 CACACCTAGGCTGAAATCAAAACA 59.722 41.667 9.30 0.00 0.00 2.83
2400 2456 6.948309 ACCTAGGCTGAAATCAAAACAACTAT 59.052 34.615 9.30 0.00 0.00 2.12
2406 2462 7.965107 GGCTGAAATCAAAACAACTATACAGAG 59.035 37.037 0.00 0.00 0.00 3.35
2409 2465 8.721478 TGAAATCAAAACAACTATACAGAGCTC 58.279 33.333 5.27 5.27 0.00 4.09
2510 2566 4.537135 ACACCAGGATATAATAGTGCCG 57.463 45.455 0.00 0.00 0.00 5.69
2551 2607 0.748005 AGAACAAGTGCCGCTGTGTT 60.748 50.000 6.60 6.60 36.92 3.32
2552 2608 0.941542 GAACAAGTGCCGCTGTGTTA 59.058 50.000 6.81 0.00 34.44 2.41
2553 2609 0.661020 AACAAGTGCCGCTGTGTTAC 59.339 50.000 5.45 0.00 32.58 2.50
2554 2610 1.164041 ACAAGTGCCGCTGTGTTACC 61.164 55.000 0.00 0.00 0.00 2.85
2555 2611 0.884704 CAAGTGCCGCTGTGTTACCT 60.885 55.000 0.00 0.00 0.00 3.08
2556 2612 0.602905 AAGTGCCGCTGTGTTACCTC 60.603 55.000 0.00 0.00 0.00 3.85
2557 2613 1.004918 GTGCCGCTGTGTTACCTCT 60.005 57.895 0.00 0.00 0.00 3.69
2558 2614 1.005037 TGCCGCTGTGTTACCTCTG 60.005 57.895 0.00 0.00 0.00 3.35
2559 2615 1.004918 GCCGCTGTGTTACCTCTGT 60.005 57.895 0.00 0.00 0.00 3.41
2630 2686 5.422214 TTCCTTCTGGTACTTCAATCCTC 57.578 43.478 0.00 0.00 34.23 3.71
2638 2694 4.891168 TGGTACTTCAATCCTCGCTACATA 59.109 41.667 0.00 0.00 0.00 2.29
2647 2703 6.381133 TCAATCCTCGCTACATATGGTGATAT 59.619 38.462 7.80 0.00 0.00 1.63
2654 2710 5.393135 CGCTACATATGGTGATATCCGAAGT 60.393 44.000 7.80 0.00 0.00 3.01
2660 2716 4.746535 TGGTGATATCCGAAGTTTAGCA 57.253 40.909 0.00 0.00 0.00 3.49
2741 2797 8.991243 AGCGTACTTGTTTAGTAATATTCACA 57.009 30.769 0.00 0.00 40.93 3.58
2742 2798 9.084164 AGCGTACTTGTTTAGTAATATTCACAG 57.916 33.333 0.00 0.00 40.93 3.66
2810 2866 3.120095 TCAATTTCAGCATCTTCAGCGTG 60.120 43.478 0.00 0.00 37.01 5.34
2811 2867 1.159285 TTTCAGCATCTTCAGCGTGG 58.841 50.000 0.00 0.00 37.01 4.94
2825 2881 2.535984 CAGCGTGGTATTCGAAGTGATC 59.464 50.000 3.35 0.00 0.00 2.92
2836 2892 2.037121 TCGAAGTGATCAGGCAAGTTGA 59.963 45.455 7.16 0.00 0.00 3.18
2842 2898 2.306805 TGATCAGGCAAGTTGACATCCT 59.693 45.455 12.25 2.53 0.00 3.24
2846 2902 4.264253 TCAGGCAAGTTGACATCCTTATG 58.736 43.478 12.25 0.00 39.17 1.90
2848 2904 2.223340 GGCAAGTTGACATCCTTATGCG 60.223 50.000 7.16 0.00 36.50 4.73
2856 2912 3.066621 TGACATCCTTATGCGCAATTTCC 59.933 43.478 17.11 0.00 36.50 3.13
2860 2916 3.879998 TCCTTATGCGCAATTTCCTGTA 58.120 40.909 17.11 0.00 0.00 2.74
2861 2917 3.876914 TCCTTATGCGCAATTTCCTGTAG 59.123 43.478 17.11 1.28 0.00 2.74
2863 2919 4.335315 CCTTATGCGCAATTTCCTGTAGAA 59.665 41.667 17.11 0.00 0.00 2.10
2914 2989 6.405176 GCAGCATAAGAAAAGGTTGAGCTAAT 60.405 38.462 0.00 0.00 0.00 1.73
2915 2990 7.192232 CAGCATAAGAAAAGGTTGAGCTAATC 58.808 38.462 0.00 0.00 0.00 1.75
2916 2991 7.066766 CAGCATAAGAAAAGGTTGAGCTAATCT 59.933 37.037 0.00 0.00 0.00 2.40
2918 2993 7.699812 GCATAAGAAAAGGTTGAGCTAATCTTG 59.300 37.037 15.12 6.59 38.78 3.02
2919 2994 5.635417 AGAAAAGGTTGAGCTAATCTTGC 57.365 39.130 0.00 0.00 38.78 4.01
2920 2995 4.460731 AGAAAAGGTTGAGCTAATCTTGCC 59.539 41.667 0.00 0.00 38.78 4.52
2921 2996 3.439857 AAGGTTGAGCTAATCTTGCCA 57.560 42.857 0.00 0.00 38.30 4.92
2922 2997 3.659183 AGGTTGAGCTAATCTTGCCAT 57.341 42.857 0.00 0.00 0.00 4.40
2924 2999 2.289002 GGTTGAGCTAATCTTGCCATCG 59.711 50.000 0.00 0.00 0.00 3.84
2938 3021 1.308998 CCATCGGGGCTTATGAACAC 58.691 55.000 0.00 0.00 0.00 3.32
2943 3026 0.252197 GGGGCTTATGAACACCGAGT 59.748 55.000 0.00 0.00 0.00 4.18
2947 3030 1.128692 GCTTATGAACACCGAGTGTGC 59.871 52.381 9.92 8.88 46.79 4.57
2989 3076 1.384409 CATTTCTCTTTTTGCAGCGCG 59.616 47.619 0.00 0.00 0.00 6.86
3004 3091 1.226745 CGCGTACGGCAATGTAGGA 60.227 57.895 18.39 0.00 43.84 2.94
3021 3108 0.882474 GGATACTCGCTCGGCTACAT 59.118 55.000 0.00 0.00 0.00 2.29
3025 3112 1.659954 CTCGCTCGGCTACATCTGC 60.660 63.158 0.00 0.00 0.00 4.26
3039 3126 3.990092 ACATCTGCGACAAGTTACTGAA 58.010 40.909 0.00 0.00 0.00 3.02
3110 3197 1.914634 CGACAAAGGGAGACTGATCG 58.085 55.000 0.00 0.00 0.00 3.69
3133 3220 1.221840 CCTGGTGATGTTCCTCGGG 59.778 63.158 0.00 0.00 0.00 5.14
3156 3243 0.759959 TTCAAGGCGTACACCCTCAA 59.240 50.000 0.00 0.00 0.00 3.02
3193 3280 4.847198 TGAATGTGCATCCATGTAGAAGT 58.153 39.130 0.00 0.00 0.00 3.01
3194 3281 4.637091 TGAATGTGCATCCATGTAGAAGTG 59.363 41.667 0.00 0.00 0.00 3.16
3195 3282 2.989909 TGTGCATCCATGTAGAAGTGG 58.010 47.619 0.00 0.00 36.82 4.00
3197 3284 3.008923 TGTGCATCCATGTAGAAGTGGAA 59.991 43.478 0.00 0.00 46.78 3.53
3235 3322 2.919602 AGAGGTGGCTGGAAATTAGGAA 59.080 45.455 0.00 0.00 0.00 3.36
3272 3359 0.101399 CTGAGCGTGTAGATCGGCTT 59.899 55.000 0.00 0.00 38.28 4.35
3273 3360 1.333931 CTGAGCGTGTAGATCGGCTTA 59.666 52.381 0.00 0.00 38.28 3.09
3275 3362 2.223502 TGAGCGTGTAGATCGGCTTAAG 60.224 50.000 0.00 0.00 38.28 1.85
3285 3372 3.799755 GGCTTAAGTGGCACCGCG 61.800 66.667 15.27 0.00 0.00 6.46
3327 3414 9.569122 GGAGAATGTATTATAGCAACCCTAAAA 57.431 33.333 0.00 0.00 0.00 1.52
3334 3421 2.586648 AGCAACCCTAAAAGACCAGG 57.413 50.000 0.00 0.00 0.00 4.45
3370 3457 6.414079 CATTAGCTGTAATGTTGTAAGCTCG 58.586 40.000 0.00 0.00 42.98 5.03
3383 3470 1.794714 AAGCTCGTCACCCTGGATAT 58.205 50.000 0.00 0.00 0.00 1.63
3384 3471 1.043816 AGCTCGTCACCCTGGATATG 58.956 55.000 0.00 0.00 0.00 1.78
3385 3472 0.034059 GCTCGTCACCCTGGATATGG 59.966 60.000 0.00 0.00 0.00 2.74
3386 3473 1.704641 CTCGTCACCCTGGATATGGA 58.295 55.000 0.00 0.00 0.00 3.41
3387 3474 2.251818 CTCGTCACCCTGGATATGGAT 58.748 52.381 0.00 0.00 0.00 3.41
3388 3475 1.970640 TCGTCACCCTGGATATGGATG 59.029 52.381 0.00 0.00 0.00 3.51
3389 3476 1.002430 CGTCACCCTGGATATGGATGG 59.998 57.143 0.00 0.00 0.00 3.51
3390 3477 1.352352 GTCACCCTGGATATGGATGGG 59.648 57.143 0.00 0.00 43.26 4.00
3391 3478 1.225431 TCACCCTGGATATGGATGGGA 59.775 52.381 3.13 0.00 40.23 4.37
3392 3479 2.157801 TCACCCTGGATATGGATGGGAT 60.158 50.000 3.13 0.00 40.23 3.85
3393 3480 2.025605 CACCCTGGATATGGATGGGATG 60.026 54.545 3.13 0.00 40.23 3.51
3394 3481 1.567649 CCCTGGATATGGATGGGATGG 59.432 57.143 0.00 0.00 40.23 3.51
3395 3482 1.567649 CCTGGATATGGATGGGATGGG 59.432 57.143 0.00 0.00 0.00 4.00
3396 3483 2.565631 CTGGATATGGATGGGATGGGA 58.434 52.381 0.00 0.00 0.00 4.37
3397 3484 2.240667 CTGGATATGGATGGGATGGGAC 59.759 54.545 0.00 0.00 0.00 4.46
3398 3485 1.210478 GGATATGGATGGGATGGGACG 59.790 57.143 0.00 0.00 0.00 4.79
3399 3486 1.210478 GATATGGATGGGATGGGACGG 59.790 57.143 0.00 0.00 0.00 4.79
3400 3487 0.840288 TATGGATGGGATGGGACGGG 60.840 60.000 0.00 0.00 0.00 5.28
3401 3488 2.447765 GGATGGGATGGGACGGGA 60.448 66.667 0.00 0.00 0.00 5.14
3402 3489 1.847968 GGATGGGATGGGACGGGAT 60.848 63.158 0.00 0.00 0.00 3.85
3403 3490 1.376466 GATGGGATGGGACGGGATG 59.624 63.158 0.00 0.00 0.00 3.51
3404 3491 2.754664 GATGGGATGGGACGGGATGC 62.755 65.000 0.00 0.00 0.00 3.91
3405 3492 4.626081 GGGATGGGACGGGATGCG 62.626 72.222 0.00 0.00 0.00 4.73
3406 3493 3.546543 GGATGGGACGGGATGCGA 61.547 66.667 0.00 0.00 0.00 5.10
3407 3494 2.504032 GATGGGACGGGATGCGAA 59.496 61.111 0.00 0.00 0.00 4.70
3408 3495 1.595382 GATGGGACGGGATGCGAAG 60.595 63.158 0.00 0.00 0.00 3.79
3421 3508 2.202676 CGAAGCAGAGGAGACGGC 60.203 66.667 0.00 0.00 0.00 5.68
3422 3509 2.185608 GAAGCAGAGGAGACGGCC 59.814 66.667 0.00 0.00 0.00 6.13
3423 3510 3.378399 GAAGCAGAGGAGACGGCCC 62.378 68.421 0.00 0.00 0.00 5.80
3426 3513 2.685380 CAGAGGAGACGGCCCCTT 60.685 66.667 0.00 0.00 31.84 3.95
3427 3514 2.364448 AGAGGAGACGGCCCCTTC 60.364 66.667 0.00 0.00 31.84 3.46
3428 3515 3.839432 GAGGAGACGGCCCCTTCG 61.839 72.222 0.00 0.00 31.84 3.79
3467 3554 2.747855 CGCCTCCCAGGTGCTTTC 60.748 66.667 0.00 0.00 39.28 2.62
3468 3555 2.361737 GCCTCCCAGGTGCTTTCC 60.362 66.667 0.00 0.00 37.80 3.13
3469 3556 2.045926 CCTCCCAGGTGCTTTCCG 60.046 66.667 0.00 0.00 0.00 4.30
3470 3557 2.045926 CTCCCAGGTGCTTTCCGG 60.046 66.667 0.00 0.00 0.00 5.14
3471 3558 4.344865 TCCCAGGTGCTTTCCGGC 62.345 66.667 0.00 0.00 0.00 6.13
3472 3559 4.351054 CCCAGGTGCTTTCCGGCT 62.351 66.667 0.00 0.00 0.00 5.52
3473 3560 2.747855 CCAGGTGCTTTCCGGCTC 60.748 66.667 0.00 0.00 0.00 4.70
3474 3561 2.747855 CAGGTGCTTTCCGGCTCC 60.748 66.667 0.00 0.00 43.67 4.70
3475 3562 3.249189 AGGTGCTTTCCGGCTCCA 61.249 61.111 0.00 0.00 45.15 3.86
3476 3563 3.056328 GGTGCTTTCCGGCTCCAC 61.056 66.667 0.00 0.86 43.07 4.02
3477 3564 3.423154 GTGCTTTCCGGCTCCACG 61.423 66.667 0.00 0.00 0.00 4.94
3494 3581 4.467084 GGACATCCGGCTTCCGCA 62.467 66.667 0.00 0.00 46.86 5.69
3495 3582 2.892425 GACATCCGGCTTCCGCAG 60.892 66.667 0.00 0.00 46.86 5.18
3496 3583 3.665675 GACATCCGGCTTCCGCAGT 62.666 63.158 0.00 0.00 46.86 4.40
3497 3584 2.436646 CATCCGGCTTCCGCAGTT 60.437 61.111 0.00 0.00 46.86 3.16
3498 3585 2.125106 ATCCGGCTTCCGCAGTTC 60.125 61.111 0.00 0.00 46.86 3.01
3499 3586 3.682292 ATCCGGCTTCCGCAGTTCC 62.682 63.158 0.00 0.00 46.86 3.62
3502 3589 3.119096 GGCTTCCGCAGTTCCGTC 61.119 66.667 0.00 0.00 38.10 4.79
3503 3590 3.479269 GCTTCCGCAGTTCCGTCG 61.479 66.667 0.00 0.00 35.78 5.12
3504 3591 3.479269 CTTCCGCAGTTCCGTCGC 61.479 66.667 0.00 0.00 0.00 5.19
3533 3620 4.543590 TTTTTCAGTTTTGAGGGTTGCA 57.456 36.364 0.00 0.00 34.15 4.08
3534 3621 4.543590 TTTTCAGTTTTGAGGGTTGCAA 57.456 36.364 0.00 0.00 34.15 4.08
3535 3622 3.799281 TTCAGTTTTGAGGGTTGCAAG 57.201 42.857 0.00 0.00 34.15 4.01
3536 3623 3.011566 TCAGTTTTGAGGGTTGCAAGA 57.988 42.857 0.00 0.00 0.00 3.02
3537 3624 3.360867 TCAGTTTTGAGGGTTGCAAGAA 58.639 40.909 0.00 0.00 0.00 2.52
3538 3625 3.766591 TCAGTTTTGAGGGTTGCAAGAAA 59.233 39.130 0.00 0.00 0.00 2.52
3539 3626 3.865164 CAGTTTTGAGGGTTGCAAGAAAC 59.135 43.478 0.00 5.07 0.00 2.78
3540 3627 2.857748 GTTTTGAGGGTTGCAAGAAACG 59.142 45.455 0.00 0.00 0.00 3.60
3541 3628 1.028905 TTGAGGGTTGCAAGAAACGG 58.971 50.000 0.00 0.00 0.00 4.44
3542 3629 0.181587 TGAGGGTTGCAAGAAACGGA 59.818 50.000 0.00 0.00 0.00 4.69
3543 3630 0.875059 GAGGGTTGCAAGAAACGGAG 59.125 55.000 0.00 0.00 0.00 4.63
3544 3631 0.537371 AGGGTTGCAAGAAACGGAGG 60.537 55.000 0.00 0.00 0.00 4.30
3545 3632 1.285950 GGTTGCAAGAAACGGAGGC 59.714 57.895 0.00 0.00 0.00 4.70
3546 3633 1.285950 GTTGCAAGAAACGGAGGCC 59.714 57.895 0.00 0.00 0.00 5.19
3556 3643 3.857764 CGGAGGCCGGTCTATTCT 58.142 61.111 9.57 0.00 44.15 2.40
3557 3644 1.364171 CGGAGGCCGGTCTATTCTG 59.636 63.158 9.57 0.00 44.15 3.02
3558 3645 1.392710 CGGAGGCCGGTCTATTCTGT 61.393 60.000 9.57 0.00 44.15 3.41
3559 3646 0.389757 GGAGGCCGGTCTATTCTGTC 59.610 60.000 9.57 0.00 0.00 3.51
3560 3647 1.404843 GAGGCCGGTCTATTCTGTCT 58.595 55.000 9.57 0.00 0.00 3.41
3561 3648 1.067821 GAGGCCGGTCTATTCTGTCTG 59.932 57.143 9.57 0.00 0.00 3.51
3562 3649 0.105039 GGCCGGTCTATTCTGTCTGG 59.895 60.000 1.90 0.00 0.00 3.86
3563 3650 0.105039 GCCGGTCTATTCTGTCTGGG 59.895 60.000 1.90 0.00 0.00 4.45
3564 3651 0.105039 CCGGTCTATTCTGTCTGGGC 59.895 60.000 0.00 0.00 0.00 5.36
3565 3652 1.115467 CGGTCTATTCTGTCTGGGCT 58.885 55.000 0.00 0.00 0.00 5.19
3566 3653 1.482593 CGGTCTATTCTGTCTGGGCTT 59.517 52.381 0.00 0.00 0.00 4.35
3567 3654 2.739932 CGGTCTATTCTGTCTGGGCTTG 60.740 54.545 0.00 0.00 0.00 4.01
3568 3655 2.237392 GGTCTATTCTGTCTGGGCTTGT 59.763 50.000 0.00 0.00 0.00 3.16
3569 3656 3.307762 GGTCTATTCTGTCTGGGCTTGTT 60.308 47.826 0.00 0.00 0.00 2.83
3570 3657 3.935828 GTCTATTCTGTCTGGGCTTGTTC 59.064 47.826 0.00 0.00 0.00 3.18
3571 3658 2.957402 ATTCTGTCTGGGCTTGTTCA 57.043 45.000 0.00 0.00 0.00 3.18
3572 3659 2.957402 TTCTGTCTGGGCTTGTTCAT 57.043 45.000 0.00 0.00 0.00 2.57
3573 3660 4.574674 ATTCTGTCTGGGCTTGTTCATA 57.425 40.909 0.00 0.00 0.00 2.15
3574 3661 4.574674 TTCTGTCTGGGCTTGTTCATAT 57.425 40.909 0.00 0.00 0.00 1.78
3575 3662 5.692115 TTCTGTCTGGGCTTGTTCATATA 57.308 39.130 0.00 0.00 0.00 0.86
3576 3663 5.894298 TCTGTCTGGGCTTGTTCATATAT 57.106 39.130 0.00 0.00 0.00 0.86
3577 3664 5.614308 TCTGTCTGGGCTTGTTCATATATG 58.386 41.667 6.36 6.36 0.00 1.78
3578 3665 4.717877 TGTCTGGGCTTGTTCATATATGG 58.282 43.478 12.78 0.00 0.00 2.74
3579 3666 3.503748 GTCTGGGCTTGTTCATATATGGC 59.496 47.826 12.78 7.51 0.00 4.40
3580 3667 2.821969 CTGGGCTTGTTCATATATGGCC 59.178 50.000 17.14 17.14 36.34 5.36
3582 3669 2.875296 GGCTTGTTCATATATGGCCCA 58.125 47.619 15.39 7.07 32.86 5.36
3583 3670 3.230134 GGCTTGTTCATATATGGCCCAA 58.770 45.455 15.39 12.64 32.86 4.12
3584 3671 3.005791 GGCTTGTTCATATATGGCCCAAC 59.994 47.826 15.39 11.54 32.86 3.77
3585 3672 3.005791 GCTTGTTCATATATGGCCCAACC 59.994 47.826 12.78 2.31 39.84 3.77
3586 3673 2.857483 TGTTCATATATGGCCCAACCG 58.143 47.619 12.78 0.00 43.94 4.44
3587 3674 2.173782 TGTTCATATATGGCCCAACCGT 59.826 45.455 12.78 0.00 43.94 4.83
3588 3675 2.552315 GTTCATATATGGCCCAACCGTG 59.448 50.000 12.78 0.00 43.94 4.94
3589 3676 1.771854 TCATATATGGCCCAACCGTGT 59.228 47.619 12.78 0.00 43.94 4.49
3590 3677 2.973406 TCATATATGGCCCAACCGTGTA 59.027 45.455 12.78 0.00 43.94 2.90
3591 3678 3.585289 TCATATATGGCCCAACCGTGTAT 59.415 43.478 12.78 0.00 41.18 2.29
3592 3679 4.042311 TCATATATGGCCCAACCGTGTATT 59.958 41.667 12.78 0.00 39.14 1.89
3593 3680 5.248705 TCATATATGGCCCAACCGTGTATTA 59.751 40.000 12.78 0.00 39.14 0.98
3594 3681 2.341846 ATGGCCCAACCGTGTATTAG 57.658 50.000 0.00 0.00 43.94 1.73
3595 3682 0.253610 TGGCCCAACCGTGTATTAGG 59.746 55.000 0.00 0.00 43.94 2.69
3596 3683 1.099295 GGCCCAACCGTGTATTAGGC 61.099 60.000 0.00 0.00 38.21 3.93
3597 3684 0.107361 GCCCAACCGTGTATTAGGCT 60.107 55.000 0.00 0.00 36.00 4.58
3598 3685 1.139455 GCCCAACCGTGTATTAGGCTA 59.861 52.381 0.00 0.00 36.00 3.93
3599 3686 2.805657 GCCCAACCGTGTATTAGGCTAG 60.806 54.545 0.00 0.00 36.00 3.42
3600 3687 2.224209 CCCAACCGTGTATTAGGCTAGG 60.224 54.545 0.00 0.00 0.00 3.02
3601 3688 2.224209 CCAACCGTGTATTAGGCTAGGG 60.224 54.545 0.00 0.00 0.00 3.53
3602 3689 2.696707 CAACCGTGTATTAGGCTAGGGA 59.303 50.000 0.00 0.00 0.00 4.20
3603 3690 3.255634 ACCGTGTATTAGGCTAGGGAT 57.744 47.619 0.00 0.00 0.00 3.85
3604 3691 3.163467 ACCGTGTATTAGGCTAGGGATC 58.837 50.000 0.00 0.00 0.00 3.36
3605 3692 3.162666 CCGTGTATTAGGCTAGGGATCA 58.837 50.000 0.00 0.00 0.00 2.92
3606 3693 3.769844 CCGTGTATTAGGCTAGGGATCAT 59.230 47.826 0.00 0.00 0.00 2.45
3607 3694 4.382040 CCGTGTATTAGGCTAGGGATCATG 60.382 50.000 0.00 0.00 0.00 3.07
3608 3695 4.508662 GTGTATTAGGCTAGGGATCATGC 58.491 47.826 0.00 0.00 0.00 4.06
3609 3696 4.223923 GTGTATTAGGCTAGGGATCATGCT 59.776 45.833 0.00 0.00 0.00 3.79
3610 3697 3.996921 ATTAGGCTAGGGATCATGCTG 57.003 47.619 0.00 0.00 0.00 4.41
3611 3698 2.702270 TAGGCTAGGGATCATGCTGA 57.298 50.000 0.00 0.00 0.00 4.26
3612 3699 2.041824 AGGCTAGGGATCATGCTGAT 57.958 50.000 0.00 0.00 40.34 2.90
3613 3700 1.629353 AGGCTAGGGATCATGCTGATG 59.371 52.381 3.76 0.00 37.20 3.07
3614 3701 1.627329 GGCTAGGGATCATGCTGATGA 59.373 52.381 3.76 0.00 42.92 2.92
3615 3702 2.354906 GGCTAGGGATCATGCTGATGAG 60.355 54.545 3.76 0.00 42.01 2.90
3616 3703 2.566279 GCTAGGGATCATGCTGATGAGA 59.434 50.000 3.76 0.00 42.01 3.27
3617 3704 3.007723 GCTAGGGATCATGCTGATGAGAA 59.992 47.826 3.76 0.00 42.01 2.87
3618 3705 4.504514 GCTAGGGATCATGCTGATGAGAAA 60.505 45.833 3.76 0.00 42.01 2.52
3619 3706 4.515028 AGGGATCATGCTGATGAGAAAA 57.485 40.909 3.76 0.00 42.01 2.29
3620 3707 4.205587 AGGGATCATGCTGATGAGAAAAC 58.794 43.478 3.76 0.00 42.01 2.43
3621 3708 3.317430 GGGATCATGCTGATGAGAAAACC 59.683 47.826 3.76 0.00 42.01 3.27
3622 3709 4.205587 GGATCATGCTGATGAGAAAACCT 58.794 43.478 3.76 0.00 42.01 3.50
3623 3710 5.371526 GGATCATGCTGATGAGAAAACCTA 58.628 41.667 3.76 0.00 42.01 3.08
3624 3711 6.002704 GGATCATGCTGATGAGAAAACCTAT 58.997 40.000 3.76 0.00 42.01 2.57
3625 3712 7.164122 GGATCATGCTGATGAGAAAACCTATA 58.836 38.462 3.76 0.00 42.01 1.31
3628 3715 4.708177 TGCTGATGAGAAAACCTATAGCC 58.292 43.478 0.00 0.00 0.00 3.93
3633 3720 4.133013 TGAGAAAACCTATAGCCGGTTC 57.867 45.455 1.90 0.00 43.66 3.62
3635 3722 4.957954 TGAGAAAACCTATAGCCGGTTCTA 59.042 41.667 1.90 0.00 43.66 2.10
3638 3725 7.039923 TGAGAAAACCTATAGCCGGTTCTATAG 60.040 40.741 20.88 20.88 43.66 1.31
3639 3726 7.008941 AGAAAACCTATAGCCGGTTCTATAGA 58.991 38.462 25.89 0.00 45.71 1.98
3646 3733 3.467803 AGCCGGTTCTATAGAAACATGC 58.532 45.455 26.19 25.19 41.66 4.06
3649 3736 3.736252 CCGGTTCTATAGAAACATGCGAG 59.264 47.826 26.19 11.42 41.66 5.03
3651 3738 4.372656 GGTTCTATAGAAACATGCGAGCT 58.627 43.478 23.00 0.00 41.25 4.09
3654 3741 1.303309 ATAGAAACATGCGAGCTGCC 58.697 50.000 0.00 0.00 45.60 4.85
3662 3749 4.925861 GCGAGCTGCCTGGGATCC 62.926 72.222 1.92 1.92 37.76 3.36
3663 3750 4.598894 CGAGCTGCCTGGGATCCG 62.599 72.222 5.45 0.00 0.00 4.18
3672 3759 2.609299 TGGGATCCGGCACAGGAA 60.609 61.111 5.45 0.00 44.50 3.36
3675 3762 2.268920 GATCCGGCACAGGAAGCA 59.731 61.111 0.00 0.00 44.50 3.91
3678 3765 0.962356 ATCCGGCACAGGAAGCAAAG 60.962 55.000 0.00 0.00 44.50 2.77
3683 3770 1.000938 GGCACAGGAAGCAAAGTTCAG 60.001 52.381 0.00 0.00 0.00 3.02
3694 3781 1.072965 CAAAGTTCAGGCCTCTGGAGT 59.927 52.381 0.00 0.00 41.23 3.85
3696 3783 1.562783 AGTTCAGGCCTCTGGAGTAC 58.437 55.000 0.00 0.00 41.23 2.73
3702 3789 2.114616 AGGCCTCTGGAGTACAATCTG 58.885 52.381 0.00 0.00 0.00 2.90
3705 3792 7.408709 CAGGCCTCTGGAGTACAATCTGTAC 62.409 52.000 0.00 8.58 43.36 2.90
3744 3831 0.326618 TGGGGGATTGGGAGAGAGTC 60.327 60.000 0.00 0.00 0.00 3.36
3747 3834 1.419387 GGGGATTGGGAGAGAGTCATG 59.581 57.143 0.00 0.00 0.00 3.07
3750 3837 2.485124 GGATTGGGAGAGAGTCATGCAG 60.485 54.545 0.00 0.00 0.00 4.41
3752 3839 0.979709 TGGGAGAGAGTCATGCAGGG 60.980 60.000 0.00 0.00 0.00 4.45
3756 3843 1.222936 GAGAGTCATGCAGGGTGGG 59.777 63.158 0.00 0.00 0.00 4.61
3765 3852 4.468769 CAGGGTGGGCCATGGCAT 62.469 66.667 36.56 12.95 42.42 4.40
3768 3855 2.734720 GGGTGGGCCATGGCATTTC 61.735 63.158 36.56 22.19 44.11 2.17
3769 3856 2.734720 GGTGGGCCATGGCATTTCC 61.735 63.158 36.56 27.58 44.11 3.13
3774 3861 3.539791 CCATGGCATTTCCGGGGC 61.540 66.667 0.00 0.00 37.80 5.80
3789 3876 2.027024 GGCGACGCCGTGATCATA 59.973 61.111 25.24 0.00 39.62 2.15
3791 3878 1.548973 GGCGACGCCGTGATCATAAG 61.549 60.000 25.24 0.00 39.62 1.73
3792 3879 1.548973 GCGACGCCGTGATCATAAGG 61.549 60.000 9.14 4.54 38.24 2.69
3793 3880 0.030235 CGACGCCGTGATCATAAGGA 59.970 55.000 16.04 0.00 0.00 3.36
3806 3894 2.963101 TCATAAGGACTATGACGGGGTG 59.037 50.000 0.00 0.00 41.27 4.61
3812 3900 2.289819 GGACTATGACGGGGTGACAAAA 60.290 50.000 0.00 0.00 0.00 2.44
3815 3903 0.183971 ATGACGGGGTGACAAAACCA 59.816 50.000 0.00 0.00 42.47 3.67
3822 3910 2.035632 GGGTGACAAAACCATCCACAA 58.964 47.619 0.00 0.00 42.47 3.33
3824 3912 3.306019 GGGTGACAAAACCATCCACAATC 60.306 47.826 0.00 0.00 42.47 2.67
3825 3913 3.320541 GGTGACAAAACCATCCACAATCA 59.679 43.478 0.00 0.00 40.22 2.57
3830 3918 2.610438 AACCATCCACAATCAGGCTT 57.390 45.000 0.00 0.00 0.00 4.35
3839 3927 3.346315 CACAATCAGGCTTGACACCATA 58.654 45.455 0.00 0.00 35.83 2.74
3845 3933 5.692115 TCAGGCTTGACACCATAGAAATA 57.308 39.130 0.00 0.00 0.00 1.40
3866 3954 7.587037 AATATGGATCCAAATTCATGACGTT 57.413 32.000 20.67 0.00 32.99 3.99
3869 3957 3.066760 GGATCCAAATTCATGACGTTCCC 59.933 47.826 6.95 0.00 0.00 3.97
3870 3958 2.080693 TCCAAATTCATGACGTTCCCG 58.919 47.619 0.00 0.00 40.83 5.14
3872 3960 2.682856 CCAAATTCATGACGTTCCCGAT 59.317 45.455 0.00 0.00 37.88 4.18
3875 3963 4.355543 AATTCATGACGTTCCCGATTTG 57.644 40.909 0.00 0.00 37.88 2.32
3881 3969 0.037975 ACGTTCCCGATTTGTACGCT 60.038 50.000 0.00 0.00 37.88 5.07
3887 3975 2.953648 TCCCGATTTGTACGCTCATCTA 59.046 45.455 0.00 0.00 0.00 1.98
3890 3978 3.975670 CCGATTTGTACGCTCATCTAGTC 59.024 47.826 0.00 0.00 0.00 2.59
3894 3982 2.022195 TGTACGCTCATCTAGTCCCAC 58.978 52.381 0.00 0.00 0.00 4.61
3895 3983 2.022195 GTACGCTCATCTAGTCCCACA 58.978 52.381 0.00 0.00 0.00 4.17
3896 3984 1.107114 ACGCTCATCTAGTCCCACAG 58.893 55.000 0.00 0.00 0.00 3.66
3899 3987 2.311463 GCTCATCTAGTCCCACAGCTA 58.689 52.381 0.00 0.00 0.00 3.32
3901 3989 2.295909 CTCATCTAGTCCCACAGCTAGC 59.704 54.545 6.62 6.62 35.80 3.42
3902 3990 2.091610 TCATCTAGTCCCACAGCTAGCT 60.092 50.000 12.68 12.68 35.80 3.32
3911 3999 3.900855 CAGCTAGCTGCCAAGGTG 58.099 61.111 30.62 14.71 44.23 4.00
3914 4002 3.081554 CTAGCTGCCAAGGTGGGT 58.918 61.111 0.00 0.00 38.19 4.51
3917 4005 1.422977 TAGCTGCCAAGGTGGGTGAA 61.423 55.000 0.00 0.00 38.19 3.18
3920 4008 0.468029 CTGCCAAGGTGGGTGAAGTT 60.468 55.000 0.00 0.00 38.19 2.66
3935 4023 1.001706 GAAGTTTTGTTCACCGAGCCC 60.002 52.381 0.00 0.00 0.00 5.19
3936 4024 0.182775 AGTTTTGTTCACCGAGCCCT 59.817 50.000 0.00 0.00 0.00 5.19
3938 4026 1.804748 GTTTTGTTCACCGAGCCCTAG 59.195 52.381 0.00 0.00 0.00 3.02
3941 4029 1.255667 TGTTCACCGAGCCCTAGTCC 61.256 60.000 0.00 0.00 0.00 3.85
3956 4044 2.055299 GTCCCAAGACTTCACGGGA 58.945 57.895 7.54 7.54 45.66 5.14
3959 4047 1.202722 TCCCAAGACTTCACGGGAAAC 60.203 52.381 8.93 0.00 44.87 2.78
3964 4052 3.840124 AGACTTCACGGGAAACTTCTT 57.160 42.857 0.00 0.00 31.35 2.52
3968 4056 2.607631 TCACGGGAAACTTCTTTCGT 57.392 45.000 0.00 0.00 37.27 3.85
3977 4065 4.381185 GGAAACTTCTTTCGTGTTTGGGTT 60.381 41.667 0.00 0.00 37.27 4.11
3980 4068 4.773013 ACTTCTTTCGTGTTTGGGTTAGA 58.227 39.130 0.00 0.00 0.00 2.10
3989 4077 5.049060 TCGTGTTTGGGTTAGAATCAATGTG 60.049 40.000 0.00 0.00 0.00 3.21
3990 4078 5.049060 CGTGTTTGGGTTAGAATCAATGTGA 60.049 40.000 0.00 0.00 0.00 3.58
3992 4080 5.830457 TGTTTGGGTTAGAATCAATGTGACA 59.170 36.000 0.00 0.00 0.00 3.58
3996 4084 7.537596 TGGGTTAGAATCAATGTGACAAAAT 57.462 32.000 0.00 0.00 0.00 1.82
4000 4088 8.306761 GGTTAGAATCAATGTGACAAAATCCTT 58.693 33.333 0.00 0.00 0.00 3.36
4002 4090 9.695526 TTAGAATCAATGTGACAAAATCCTTTG 57.304 29.630 0.00 0.00 46.26 2.77
4005 4093 8.961294 AATCAATGTGACAAAATCCTTTGAAA 57.039 26.923 4.68 0.00 44.03 2.69
4008 4096 9.393512 TCAATGTGACAAAATCCTTTGAAAAAT 57.606 25.926 4.68 0.00 44.03 1.82
4011 4099 6.128729 GTGACAAAATCCTTTGAAAAATGCG 58.871 36.000 4.68 0.00 44.03 4.73
4014 4102 5.007528 ACAAAATCCTTTGAAAAATGCGGTG 59.992 36.000 4.68 0.00 44.03 4.94
4017 4105 2.955660 TCCTTTGAAAAATGCGGTGTCT 59.044 40.909 0.00 0.00 0.00 3.41
4023 4111 5.484173 TGAAAAATGCGGTGTCTATGATC 57.516 39.130 0.00 0.00 0.00 2.92
4026 4114 1.328279 ATGCGGTGTCTATGATCCGA 58.672 50.000 14.43 4.67 44.86 4.55
4027 4115 0.668535 TGCGGTGTCTATGATCCGAG 59.331 55.000 14.43 0.00 44.86 4.63
4032 4120 2.894126 GGTGTCTATGATCCGAGATGGT 59.106 50.000 0.00 0.00 39.52 3.55
4033 4121 3.305676 GGTGTCTATGATCCGAGATGGTG 60.306 52.174 0.00 0.00 39.52 4.17
4034 4122 2.297315 TGTCTATGATCCGAGATGGTGC 59.703 50.000 0.00 0.00 39.52 5.01
4035 4123 2.297315 GTCTATGATCCGAGATGGTGCA 59.703 50.000 0.00 0.00 39.52 4.57
4036 4124 2.297315 TCTATGATCCGAGATGGTGCAC 59.703 50.000 8.80 8.80 39.52 4.57
4038 4126 2.202932 ATCCGAGATGGTGCACGC 60.203 61.111 11.45 4.50 39.52 5.34
4044 4132 1.153289 AGATGGTGCACGCCAGATC 60.153 57.895 11.45 6.99 42.47 2.75
4047 4135 0.761187 ATGGTGCACGCCAGATCTAT 59.239 50.000 11.45 0.00 42.47 1.98
4053 4141 4.500887 GGTGCACGCCAGATCTATAAAGTA 60.501 45.833 11.45 0.00 0.00 2.24
4055 4143 5.522460 GTGCACGCCAGATCTATAAAGTAAA 59.478 40.000 0.00 0.00 0.00 2.01
4056 4144 5.753438 TGCACGCCAGATCTATAAAGTAAAG 59.247 40.000 0.00 0.00 0.00 1.85
4059 4147 7.599245 GCACGCCAGATCTATAAAGTAAAGTAT 59.401 37.037 0.00 0.00 0.00 2.12
4060 4148 8.916654 CACGCCAGATCTATAAAGTAAAGTATG 58.083 37.037 0.00 0.00 0.00 2.39
4077 4165 6.540438 AAGTATGAGAAACTACCGGATTGA 57.460 37.500 9.46 0.00 0.00 2.57
4080 4168 3.531538 TGAGAAACTACCGGATTGATGC 58.468 45.455 9.46 0.00 0.00 3.91
4083 4171 0.814010 AACTACCGGATTGATGCGCC 60.814 55.000 9.46 0.00 40.45 6.53
4090 4178 0.730265 GGATTGATGCGCCGTTTGTA 59.270 50.000 4.18 0.00 0.00 2.41
4092 4180 0.098728 ATTGATGCGCCGTTTGTAGC 59.901 50.000 4.18 0.00 0.00 3.58
4093 4181 1.231296 TTGATGCGCCGTTTGTAGCA 61.231 50.000 4.18 0.00 44.13 3.49
4096 4184 1.305219 ATGCGCCGTTTGTAGCATGT 61.305 50.000 4.18 0.00 46.97 3.21
4098 4186 1.065031 GCGCCGTTTGTAGCATGTTG 61.065 55.000 0.00 0.00 0.00 3.33
4101 4189 0.525761 CCGTTTGTAGCATGTTGGGG 59.474 55.000 0.00 0.00 0.00 4.96
4125 4213 4.257267 CCTTTTCAAGGGACATGGAAAC 57.743 45.455 0.00 0.00 45.27 2.78
4129 4217 0.965363 CAAGGGACATGGAAACGGGG 60.965 60.000 0.00 0.00 0.00 5.73
4130 4218 1.137594 AAGGGACATGGAAACGGGGA 61.138 55.000 0.00 0.00 0.00 4.81
4131 4219 1.077716 GGGACATGGAAACGGGGAG 60.078 63.158 0.00 0.00 0.00 4.30
4132 4220 1.077716 GGACATGGAAACGGGGAGG 60.078 63.158 0.00 0.00 0.00 4.30
4133 4221 1.749258 GACATGGAAACGGGGAGGC 60.749 63.158 0.00 0.00 0.00 4.70
4134 4222 2.824041 CATGGAAACGGGGAGGCG 60.824 66.667 0.00 0.00 0.00 5.52
4135 4223 3.327404 ATGGAAACGGGGAGGCGT 61.327 61.111 0.00 0.00 0.00 5.68
4136 4224 3.622060 ATGGAAACGGGGAGGCGTG 62.622 63.158 0.00 0.00 0.00 5.34
4137 4225 4.011517 GGAAACGGGGAGGCGTGA 62.012 66.667 0.00 0.00 0.00 4.35
4138 4226 2.434359 GAAACGGGGAGGCGTGAG 60.434 66.667 0.00 0.00 0.00 3.51
4139 4227 3.236003 GAAACGGGGAGGCGTGAGT 62.236 63.158 0.00 0.00 0.00 3.41
4140 4228 1.880819 GAAACGGGGAGGCGTGAGTA 61.881 60.000 0.00 0.00 0.00 2.59
4141 4229 2.163601 AAACGGGGAGGCGTGAGTAC 62.164 60.000 0.00 0.00 0.00 2.73
4142 4230 3.066190 CGGGGAGGCGTGAGTACA 61.066 66.667 0.00 0.00 0.00 2.90
4143 4231 2.642254 CGGGGAGGCGTGAGTACAA 61.642 63.158 0.00 0.00 0.00 2.41
4144 4232 1.079336 GGGGAGGCGTGAGTACAAC 60.079 63.158 0.00 0.00 0.00 3.32
4145 4233 1.542187 GGGGAGGCGTGAGTACAACT 61.542 60.000 0.00 0.00 0.00 3.16
4146 4234 0.320697 GGGAGGCGTGAGTACAACTT 59.679 55.000 0.00 0.00 0.00 2.66
4147 4235 1.672145 GGGAGGCGTGAGTACAACTTC 60.672 57.143 0.00 0.00 0.00 3.01
4148 4236 1.672145 GGAGGCGTGAGTACAACTTCC 60.672 57.143 0.00 0.00 0.00 3.46
4149 4237 1.000506 GAGGCGTGAGTACAACTTCCA 59.999 52.381 0.00 0.00 0.00 3.53
4150 4238 1.623811 AGGCGTGAGTACAACTTCCAT 59.376 47.619 0.00 0.00 0.00 3.41
4151 4239 2.038557 AGGCGTGAGTACAACTTCCATT 59.961 45.455 0.00 0.00 0.00 3.16
4152 4240 2.812011 GGCGTGAGTACAACTTCCATTT 59.188 45.455 0.00 0.00 0.00 2.32
4153 4241 3.120304 GGCGTGAGTACAACTTCCATTTC 60.120 47.826 0.00 0.00 0.00 2.17
4154 4242 3.120304 GCGTGAGTACAACTTCCATTTCC 60.120 47.826 0.00 0.00 0.00 3.13
4155 4243 4.062293 CGTGAGTACAACTTCCATTTCCA 58.938 43.478 0.00 0.00 0.00 3.53
4156 4244 4.084013 CGTGAGTACAACTTCCATTTCCAC 60.084 45.833 0.00 0.00 0.00 4.02
4157 4245 4.062293 TGAGTACAACTTCCATTTCCACG 58.938 43.478 0.00 0.00 0.00 4.94
4158 4246 4.062991 GAGTACAACTTCCATTTCCACGT 58.937 43.478 0.00 0.00 0.00 4.49
4159 4247 3.813166 AGTACAACTTCCATTTCCACGTG 59.187 43.478 9.08 9.08 0.00 4.49
4160 4248 1.953686 ACAACTTCCATTTCCACGTGG 59.046 47.619 29.26 29.26 36.82 4.94
4161 4249 1.269448 CAACTTCCATTTCCACGTGGG 59.731 52.381 33.40 17.54 36.15 4.61
4162 4250 0.476771 ACTTCCATTTCCACGTGGGT 59.523 50.000 33.40 17.97 38.11 4.51
4163 4251 0.881118 CTTCCATTTCCACGTGGGTG 59.119 55.000 33.40 26.23 43.99 4.61
4171 4259 2.282110 CACGTGGGTGGCCATTGA 60.282 61.111 9.72 0.00 40.58 2.57
4172 4260 2.034066 ACGTGGGTGGCCATTGAG 59.966 61.111 9.72 2.33 0.00 3.02
4173 4261 2.350895 CGTGGGTGGCCATTGAGA 59.649 61.111 9.72 0.00 0.00 3.27
4174 4262 1.077501 CGTGGGTGGCCATTGAGAT 60.078 57.895 9.72 0.00 0.00 2.75
4175 4263 1.378882 CGTGGGTGGCCATTGAGATG 61.379 60.000 9.72 0.00 0.00 2.90
4176 4264 0.323725 GTGGGTGGCCATTGAGATGT 60.324 55.000 9.72 0.00 0.00 3.06
4177 4265 0.323633 TGGGTGGCCATTGAGATGTG 60.324 55.000 9.72 0.00 0.00 3.21
4178 4266 0.034186 GGGTGGCCATTGAGATGTGA 60.034 55.000 9.72 0.00 0.00 3.58
4179 4267 1.410648 GGGTGGCCATTGAGATGTGAT 60.411 52.381 9.72 0.00 0.00 3.06
4180 4268 1.952296 GGTGGCCATTGAGATGTGATC 59.048 52.381 9.72 0.00 0.00 2.92
4181 4269 1.600957 GTGGCCATTGAGATGTGATCG 59.399 52.381 9.72 0.00 0.00 3.69
4182 4270 1.485895 TGGCCATTGAGATGTGATCGA 59.514 47.619 0.00 0.00 0.00 3.59
4183 4271 2.093021 TGGCCATTGAGATGTGATCGAA 60.093 45.455 0.00 0.00 0.00 3.71
4184 4272 2.547211 GGCCATTGAGATGTGATCGAAG 59.453 50.000 0.00 0.00 0.00 3.79
4185 4273 3.201290 GCCATTGAGATGTGATCGAAGT 58.799 45.455 0.00 0.00 0.00 3.01
4186 4274 4.371786 GCCATTGAGATGTGATCGAAGTA 58.628 43.478 0.00 0.00 0.00 2.24
4187 4275 4.210120 GCCATTGAGATGTGATCGAAGTAC 59.790 45.833 0.00 0.00 0.00 2.73
4188 4276 5.595885 CCATTGAGATGTGATCGAAGTACT 58.404 41.667 0.00 0.00 0.00 2.73
4189 4277 5.689514 CCATTGAGATGTGATCGAAGTACTC 59.310 44.000 0.00 0.00 0.00 2.59
4200 4288 2.923605 GAAGTACTCGAGGACACAGG 57.076 55.000 29.09 0.00 0.00 4.00
4201 4289 1.473278 GAAGTACTCGAGGACACAGGG 59.527 57.143 29.09 0.00 0.00 4.45
4202 4290 0.697079 AGTACTCGAGGACACAGGGA 59.303 55.000 29.09 0.00 0.00 4.20
4203 4291 1.096416 GTACTCGAGGACACAGGGAG 58.904 60.000 23.24 0.00 0.00 4.30
4204 4292 0.034380 TACTCGAGGACACAGGGAGG 60.034 60.000 18.41 0.00 0.00 4.30
4205 4293 2.680352 TCGAGGACACAGGGAGGC 60.680 66.667 0.00 0.00 0.00 4.70
4206 4294 4.135153 CGAGGACACAGGGAGGCG 62.135 72.222 0.00 0.00 0.00 5.52
4207 4295 2.997897 GAGGACACAGGGAGGCGT 60.998 66.667 0.00 0.00 0.00 5.68
4208 4296 3.302347 GAGGACACAGGGAGGCGTG 62.302 68.421 0.00 0.00 39.10 5.34
4210 4298 4.314440 GACACAGGGAGGCGTGCA 62.314 66.667 0.00 0.00 36.57 4.57
4211 4299 3.612247 GACACAGGGAGGCGTGCAT 62.612 63.158 0.00 0.00 36.57 3.96
4212 4300 3.129502 CACAGGGAGGCGTGCATG 61.130 66.667 11.04 11.04 0.00 4.06
4213 4301 4.415150 ACAGGGAGGCGTGCATGG 62.415 66.667 16.61 0.00 28.61 3.66
4214 4302 4.415150 CAGGGAGGCGTGCATGGT 62.415 66.667 8.27 0.00 0.00 3.55
4215 4303 4.101448 AGGGAGGCGTGCATGGTC 62.101 66.667 8.27 0.00 0.00 4.02
4217 4305 4.760047 GGAGGCGTGCATGGTCGT 62.760 66.667 8.27 0.00 0.00 4.34
4218 4306 3.188786 GAGGCGTGCATGGTCGTC 61.189 66.667 8.27 0.00 0.00 4.20
4223 4311 3.490759 GTGCATGGTCGTCGGCTG 61.491 66.667 0.00 0.00 0.00 4.85
4224 4312 3.690280 TGCATGGTCGTCGGCTGA 61.690 61.111 0.00 0.00 0.00 4.26
4225 4313 2.202932 GCATGGTCGTCGGCTGAT 60.203 61.111 0.00 0.00 0.00 2.90
4226 4314 1.815421 GCATGGTCGTCGGCTGATT 60.815 57.895 0.00 0.00 0.00 2.57
4227 4315 1.766143 GCATGGTCGTCGGCTGATTC 61.766 60.000 0.00 0.00 0.00 2.52
4228 4316 0.460109 CATGGTCGTCGGCTGATTCA 60.460 55.000 0.00 0.00 0.00 2.57
4229 4317 0.179100 ATGGTCGTCGGCTGATTCAG 60.179 55.000 9.40 9.40 34.12 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 89 1.723542 GAGACACGACTGCAATGACTG 59.276 52.381 0.00 0.00 0.00 3.51
114 115 7.063593 TCTATCTAGTGTTCTGTAATGCTCCT 58.936 38.462 0.00 0.00 0.00 3.69
144 145 1.393539 CTGTAAACGCGCTACTGCAAT 59.606 47.619 5.73 0.00 39.64 3.56
153 154 0.388907 TCACTACCCTGTAAACGCGC 60.389 55.000 5.73 0.00 0.00 6.86
353 354 6.030548 TGAAACGATTTTGGGCAATTATCA 57.969 33.333 0.00 0.00 0.00 2.15
371 372 6.980051 ACTACTTTATGACCCGATTGAAAC 57.020 37.500 0.00 0.00 0.00 2.78
397 398 7.862372 CGCATGTGCCTCTATTATTAAAACATT 59.138 33.333 0.00 0.00 37.91 2.71
398 399 7.013274 ACGCATGTGCCTCTATTATTAAAACAT 59.987 33.333 6.08 0.00 37.91 2.71
400 401 6.632834 CACGCATGTGCCTCTATTATTAAAAC 59.367 38.462 6.08 0.00 39.67 2.43
423 424 3.696051 AGGTACAATTGATGCATGGACAC 59.304 43.478 13.59 0.00 29.13 3.67
452 453 2.197324 TTGTGTCCACAAGGGCCC 59.803 61.111 16.46 16.46 45.42 5.80
462 463 4.913335 AATCATGATGCTGATTGTGTCC 57.087 40.909 9.46 0.00 42.73 4.02
538 539 0.527565 AAGCATTGCCCAACACGATC 59.472 50.000 4.70 0.00 0.00 3.69
577 578 5.702865 CTGTGTTTTCATGGTGTCTTATGG 58.297 41.667 0.00 0.00 0.00 2.74
580 581 4.460263 AGCTGTGTTTTCATGGTGTCTTA 58.540 39.130 0.00 0.00 0.00 2.10
626 628 2.229784 GGGCTTTTGAGTTCAGACATGG 59.770 50.000 0.00 0.00 0.00 3.66
637 639 1.001378 CGAGGTTTGTGGGCTTTTGAG 60.001 52.381 0.00 0.00 0.00 3.02
638 640 1.028905 CGAGGTTTGTGGGCTTTTGA 58.971 50.000 0.00 0.00 0.00 2.69
639 641 1.028905 TCGAGGTTTGTGGGCTTTTG 58.971 50.000 0.00 0.00 0.00 2.44
640 642 1.613437 CATCGAGGTTTGTGGGCTTTT 59.387 47.619 0.00 0.00 0.00 2.27
641 643 1.247567 CATCGAGGTTTGTGGGCTTT 58.752 50.000 0.00 0.00 0.00 3.51
642 644 1.244019 GCATCGAGGTTTGTGGGCTT 61.244 55.000 0.00 0.00 0.00 4.35
643 645 1.675641 GCATCGAGGTTTGTGGGCT 60.676 57.895 0.00 0.00 0.00 5.19
644 646 1.315257 ATGCATCGAGGTTTGTGGGC 61.315 55.000 0.00 0.00 0.00 5.36
645 647 0.734889 GATGCATCGAGGTTTGTGGG 59.265 55.000 11.68 0.00 0.00 4.61
716 718 0.700564 AATGGGAGCTTCAGCCTTCA 59.299 50.000 0.00 0.00 43.38 3.02
717 719 2.717639 TAATGGGAGCTTCAGCCTTC 57.282 50.000 0.00 0.00 43.38 3.46
718 720 3.053395 TGAATAATGGGAGCTTCAGCCTT 60.053 43.478 0.00 0.00 43.38 4.35
719 721 2.511218 TGAATAATGGGAGCTTCAGCCT 59.489 45.455 0.00 0.00 43.38 4.58
720 722 2.883386 CTGAATAATGGGAGCTTCAGCC 59.117 50.000 0.00 0.00 43.38 4.85
721 723 3.549794 ACTGAATAATGGGAGCTTCAGC 58.450 45.455 10.23 0.00 45.36 4.26
722 724 5.163581 CCAAACTGAATAATGGGAGCTTCAG 60.164 44.000 9.04 9.04 46.35 3.02
763 765 3.129988 GGAAATGCTTCACCATCTCCTTG 59.870 47.826 0.00 0.00 31.10 3.61
836 838 7.116376 CAGAAACAAGTAAGAGCGTCTGAATAA 59.884 37.037 0.00 0.00 34.50 1.40
838 840 5.406780 CAGAAACAAGTAAGAGCGTCTGAAT 59.593 40.000 0.00 0.00 34.50 2.57
894 896 2.298163 CAGAGCAAGGAAACCAGCAAAT 59.702 45.455 0.00 0.00 30.95 2.32
927 951 2.225467 GGAGATGGCTTATTCAGTGGC 58.775 52.381 0.00 0.00 0.00 5.01
1122 1146 2.021355 GGAGAGCATCCTCAGTGTTG 57.979 55.000 0.85 0.00 45.64 3.33
1133 1157 2.683152 GCCAATCTTGTCTGGAGAGCAT 60.683 50.000 0.00 0.00 34.35 3.79
1228 1252 1.377202 GCGGCATGGTTTCCTCTGA 60.377 57.895 0.00 0.00 0.00 3.27
1245 1269 2.162408 GCTTTCCTGTACCTGATTGTGC 59.838 50.000 0.00 0.00 0.00 4.57
1251 1275 2.224769 CCCTTTGCTTTCCTGTACCTGA 60.225 50.000 0.00 0.00 0.00 3.86
1348 1372 4.157289 CCAAAGGAAGATGGTGATGACAAG 59.843 45.833 0.00 0.00 31.84 3.16
1350 1374 3.330405 TCCAAAGGAAGATGGTGATGACA 59.670 43.478 0.00 0.00 37.94 3.58
1356 1380 5.899299 GAATCAATCCAAAGGAAGATGGTG 58.101 41.667 5.48 0.00 37.94 4.17
1381 1405 5.598417 TACTCTTCAGTAGATGCCTTGCATA 59.402 40.000 0.85 0.00 40.73 3.14
1407 1431 7.943079 TGAGAATGTCCACATTTTGATATGT 57.057 32.000 6.39 0.00 45.72 2.29
1504 1528 4.833390 AGAAGAAGGAAAGTCGGGTTATG 58.167 43.478 0.00 0.00 0.00 1.90
1566 1590 3.508845 ATGCTTAACCTCAACAGTGGT 57.491 42.857 0.00 0.00 38.35 4.16
1603 1627 2.730715 CGTACTCTTCTCTGCTGCTCAC 60.731 54.545 0.00 0.00 0.00 3.51
1626 1650 3.420893 CTTTGGGTGCTGAAGGATGTAA 58.579 45.455 0.00 0.00 0.00 2.41
1690 1714 4.437682 TCACTCCAGTCAGAACCAATTT 57.562 40.909 0.00 0.00 0.00 1.82
1707 1731 4.491676 CTTGCAGCAAAATTAGCATCACT 58.508 39.130 9.65 0.00 36.80 3.41
1764 1788 1.133668 CATCCCATTCCCTCCAAGGAC 60.134 57.143 0.00 0.00 37.67 3.85
1822 1846 1.795768 TCACCAGCGTGTCTTGAATC 58.204 50.000 0.00 0.00 41.09 2.52
1852 1876 2.028020 GTGGAGAAAGGGTCGAGATGTT 60.028 50.000 0.00 0.00 0.00 2.71
1934 1958 8.798402 CAGTAAGAGCTAACCTAAGTATGCTAT 58.202 37.037 0.00 0.00 35.61 2.97
1947 1971 4.922719 ACGTGCTATCAGTAAGAGCTAAC 58.077 43.478 0.00 0.00 37.12 2.34
1958 1982 4.799678 CTCCAGGTAATACGTGCTATCAG 58.200 47.826 7.52 0.00 33.03 2.90
1968 1992 8.754080 AGATAGTCATATTGCTCCAGGTAATAC 58.246 37.037 0.00 0.00 35.83 1.89
2039 2065 8.584157 TGGTTCAGATTTATGCTGTTTTGTTAT 58.416 29.630 0.00 0.00 34.98 1.89
2041 2067 6.815089 TGGTTCAGATTTATGCTGTTTTGTT 58.185 32.000 0.00 0.00 34.98 2.83
2042 2068 6.403866 TGGTTCAGATTTATGCTGTTTTGT 57.596 33.333 0.00 0.00 34.98 2.83
2048 2104 6.688637 TGATCTTGGTTCAGATTTATGCTG 57.311 37.500 0.00 0.00 33.36 4.41
2058 2114 6.176183 AGGTACAGATTTGATCTTGGTTCAG 58.824 40.000 0.00 0.00 37.58 3.02
2059 2115 6.126863 AGGTACAGATTTGATCTTGGTTCA 57.873 37.500 0.00 0.00 37.58 3.18
2060 2116 8.561738 TTAAGGTACAGATTTGATCTTGGTTC 57.438 34.615 0.00 0.00 37.58 3.62
2061 2117 9.533831 AATTAAGGTACAGATTTGATCTTGGTT 57.466 29.630 0.00 0.00 37.58 3.67
2070 2126 9.613428 TCAGACCATAATTAAGGTACAGATTTG 57.387 33.333 12.23 3.96 38.50 2.32
2073 2129 8.993424 ACTTCAGACCATAATTAAGGTACAGAT 58.007 33.333 12.23 0.00 38.50 2.90
2074 2130 8.258007 CACTTCAGACCATAATTAAGGTACAGA 58.742 37.037 12.23 8.01 38.50 3.41
2075 2131 7.495934 CCACTTCAGACCATAATTAAGGTACAG 59.504 40.741 12.23 8.42 38.50 2.74
2083 2139 7.252612 TCTTGTCCACTTCAGACCATAATTA 57.747 36.000 0.00 0.00 33.09 1.40
2093 2149 5.809562 CAGTAATAGCTCTTGTCCACTTCAG 59.190 44.000 0.00 0.00 0.00 3.02
2096 2152 5.717178 TCTCAGTAATAGCTCTTGTCCACTT 59.283 40.000 0.00 0.00 0.00 3.16
2106 2162 8.438676 TTGCCTTATTTTCTCAGTAATAGCTC 57.561 34.615 0.00 0.00 0.00 4.09
2107 2163 8.807948 TTTGCCTTATTTTCTCAGTAATAGCT 57.192 30.769 0.00 0.00 0.00 3.32
2161 2217 2.973945 ACCCTTGCGAGAATGTAAGAC 58.026 47.619 1.22 0.00 33.96 3.01
2214 2270 9.609346 GTTATTTTGGTCTAGTAGAATAAGGCA 57.391 33.333 0.17 0.00 0.00 4.75
2245 2301 9.639601 GTAAAGATCTTTGAATTTCCCGATTTT 57.360 29.630 27.37 0.69 34.23 1.82
2246 2302 7.968405 CGTAAAGATCTTTGAATTTCCCGATTT 59.032 33.333 27.37 1.06 34.23 2.17
2247 2303 7.120726 ACGTAAAGATCTTTGAATTTCCCGATT 59.879 33.333 27.37 1.69 34.23 3.34
2248 2304 6.598064 ACGTAAAGATCTTTGAATTTCCCGAT 59.402 34.615 27.37 2.12 34.23 4.18
2249 2305 5.935789 ACGTAAAGATCTTTGAATTTCCCGA 59.064 36.000 27.37 3.64 34.23 5.14
2250 2306 6.178239 ACGTAAAGATCTTTGAATTTCCCG 57.822 37.500 27.37 17.35 34.23 5.14
2251 2307 8.079809 TGAAACGTAAAGATCTTTGAATTTCCC 58.920 33.333 28.09 17.48 32.69 3.97
2252 2308 9.626045 ATGAAACGTAAAGATCTTTGAATTTCC 57.374 29.630 28.09 19.36 32.69 3.13
2255 2311 8.915654 GCAATGAAACGTAAAGATCTTTGAATT 58.084 29.630 27.37 17.11 34.23 2.17
2256 2312 8.081633 TGCAATGAAACGTAAAGATCTTTGAAT 58.918 29.630 27.37 11.55 34.23 2.57
2257 2313 7.421599 TGCAATGAAACGTAAAGATCTTTGAA 58.578 30.769 27.37 8.65 34.23 2.69
2258 2314 6.964908 TGCAATGAAACGTAAAGATCTTTGA 58.035 32.000 27.37 11.12 34.23 2.69
2259 2315 7.801547 ATGCAATGAAACGTAAAGATCTTTG 57.198 32.000 27.37 15.76 34.23 2.77
2260 2316 8.081633 TCAATGCAATGAAACGTAAAGATCTTT 58.918 29.630 23.53 23.53 36.63 2.52
2261 2317 7.592938 TCAATGCAATGAAACGTAAAGATCTT 58.407 30.769 0.85 0.88 0.00 2.40
2262 2318 7.144722 TCAATGCAATGAAACGTAAAGATCT 57.855 32.000 0.85 0.00 0.00 2.75
2263 2319 7.750458 TCTTCAATGCAATGAAACGTAAAGATC 59.250 33.333 17.51 0.00 38.75 2.75
2264 2320 7.592938 TCTTCAATGCAATGAAACGTAAAGAT 58.407 30.769 17.51 0.00 38.75 2.40
2265 2321 6.964908 TCTTCAATGCAATGAAACGTAAAGA 58.035 32.000 17.51 7.23 38.75 2.52
2266 2322 7.077605 TCTCTTCAATGCAATGAAACGTAAAG 58.922 34.615 17.51 5.02 38.75 1.85
2267 2323 6.964908 TCTCTTCAATGCAATGAAACGTAAA 58.035 32.000 17.51 0.00 38.75 2.01
2268 2324 6.552859 TCTCTTCAATGCAATGAAACGTAA 57.447 33.333 17.51 0.64 38.75 3.18
2269 2325 6.348458 CCTTCTCTTCAATGCAATGAAACGTA 60.348 38.462 17.51 5.53 38.75 3.57
2270 2326 5.437289 TTCTCTTCAATGCAATGAAACGT 57.563 34.783 17.51 0.00 38.75 3.99
2271 2327 4.855388 CCTTCTCTTCAATGCAATGAAACG 59.145 41.667 17.51 11.39 38.75 3.60
2272 2328 5.047802 TCCCTTCTCTTCAATGCAATGAAAC 60.048 40.000 17.51 0.00 38.75 2.78
2273 2329 5.078949 TCCCTTCTCTTCAATGCAATGAAA 58.921 37.500 17.51 8.46 38.75 2.69
2274 2330 4.665451 TCCCTTCTCTTCAATGCAATGAA 58.335 39.130 16.12 16.12 37.70 2.57
2275 2331 4.305539 TCCCTTCTCTTCAATGCAATGA 57.694 40.909 0.00 0.00 0.00 2.57
2276 2332 5.826737 ACTATCCCTTCTCTTCAATGCAATG 59.173 40.000 0.00 0.00 0.00 2.82
2277 2333 6.011122 ACTATCCCTTCTCTTCAATGCAAT 57.989 37.500 0.00 0.00 0.00 3.56
2278 2334 5.441718 ACTATCCCTTCTCTTCAATGCAA 57.558 39.130 0.00 0.00 0.00 4.08
2279 2335 5.425217 TGTACTATCCCTTCTCTTCAATGCA 59.575 40.000 0.00 0.00 0.00 3.96
2280 2336 5.918608 TGTACTATCCCTTCTCTTCAATGC 58.081 41.667 0.00 0.00 0.00 3.56
2281 2337 7.659390 GGATTGTACTATCCCTTCTCTTCAATG 59.341 40.741 21.65 0.00 38.53 2.82
2282 2338 7.570607 AGGATTGTACTATCCCTTCTCTTCAAT 59.429 37.037 26.51 6.61 44.34 2.57
2283 2339 6.903534 AGGATTGTACTATCCCTTCTCTTCAA 59.096 38.462 26.51 0.00 44.34 2.69
2284 2340 6.444704 AGGATTGTACTATCCCTTCTCTTCA 58.555 40.000 26.51 0.00 44.34 3.02
2285 2341 6.014925 GGAGGATTGTACTATCCCTTCTCTTC 60.015 46.154 26.51 17.44 44.34 2.87
2286 2342 5.841783 GGAGGATTGTACTATCCCTTCTCTT 59.158 44.000 26.51 11.13 44.34 2.85
2287 2343 5.137082 AGGAGGATTGTACTATCCCTTCTCT 59.863 44.000 26.51 16.36 44.34 3.10
2288 2344 5.399113 AGGAGGATTGTACTATCCCTTCTC 58.601 45.833 26.51 18.86 44.34 2.87
2289 2345 5.426325 AGGAGGATTGTACTATCCCTTCT 57.574 43.478 26.51 19.45 44.34 2.85
2290 2346 5.717654 CCTAGGAGGATTGTACTATCCCTTC 59.282 48.000 26.51 19.71 44.34 3.46
2291 2347 5.378985 TCCTAGGAGGATTGTACTATCCCTT 59.621 44.000 26.51 18.25 44.34 3.95
2292 2348 4.926987 TCCTAGGAGGATTGTACTATCCCT 59.073 45.833 26.51 20.56 44.34 4.20
2293 2349 5.265989 CTCCTAGGAGGATTGTACTATCCC 58.734 50.000 28.68 19.15 44.81 3.85
2307 2363 0.264955 TAACCCCAGCCTCCTAGGAG 59.735 60.000 29.27 29.27 37.67 3.69
2308 2364 0.031414 GTAACCCCAGCCTCCTAGGA 60.031 60.000 11.98 11.98 37.67 2.94
2309 2365 0.326238 TGTAACCCCAGCCTCCTAGG 60.326 60.000 0.82 0.82 38.80 3.02
2310 2366 1.580059 TTGTAACCCCAGCCTCCTAG 58.420 55.000 0.00 0.00 0.00 3.02
2311 2367 1.913419 CTTTGTAACCCCAGCCTCCTA 59.087 52.381 0.00 0.00 0.00 2.94
2312 2368 0.698818 CTTTGTAACCCCAGCCTCCT 59.301 55.000 0.00 0.00 0.00 3.69
2313 2369 0.696501 TCTTTGTAACCCCAGCCTCC 59.303 55.000 0.00 0.00 0.00 4.30
2314 2370 2.026262 TGATCTTTGTAACCCCAGCCTC 60.026 50.000 0.00 0.00 0.00 4.70
2315 2371 1.992557 TGATCTTTGTAACCCCAGCCT 59.007 47.619 0.00 0.00 0.00 4.58
2316 2372 2.507407 TGATCTTTGTAACCCCAGCC 57.493 50.000 0.00 0.00 0.00 4.85
2317 2373 3.056821 GGTTTGATCTTTGTAACCCCAGC 60.057 47.826 0.00 0.00 35.17 4.85
2318 2374 4.148838 TGGTTTGATCTTTGTAACCCCAG 58.851 43.478 0.00 0.00 39.39 4.45
2319 2375 4.186077 TGGTTTGATCTTTGTAACCCCA 57.814 40.909 0.00 0.00 39.39 4.96
2320 2376 5.538849 TTTGGTTTGATCTTTGTAACCCC 57.461 39.130 0.00 0.00 39.39 4.95
2321 2377 9.203421 CTTATTTTGGTTTGATCTTTGTAACCC 57.797 33.333 0.00 0.00 39.39 4.11
2322 2378 9.974980 TCTTATTTTGGTTTGATCTTTGTAACC 57.025 29.630 0.00 0.00 40.31 2.85
2333 2389 9.883142 AGTGAACAATTTCTTATTTTGGTTTGA 57.117 25.926 0.00 0.00 32.36 2.69
2335 2391 9.883142 TGAGTGAACAATTTCTTATTTTGGTTT 57.117 25.926 0.00 0.00 32.36 3.27
2336 2392 9.883142 TTGAGTGAACAATTTCTTATTTTGGTT 57.117 25.926 0.00 0.00 32.36 3.67
2337 2393 9.883142 TTTGAGTGAACAATTTCTTATTTTGGT 57.117 25.926 0.00 0.00 32.36 3.67
2344 2400 9.734620 CATCAGTTTTGAGTGAACAATTTCTTA 57.265 29.630 0.00 0.00 36.61 2.10
2345 2401 8.469200 TCATCAGTTTTGAGTGAACAATTTCTT 58.531 29.630 0.00 0.00 36.61 2.52
2346 2402 7.917505 GTCATCAGTTTTGAGTGAACAATTTCT 59.082 33.333 0.00 0.00 36.61 2.52
2347 2403 7.701924 TGTCATCAGTTTTGAGTGAACAATTTC 59.298 33.333 0.00 0.00 36.61 2.17
2352 2408 4.940654 TGTGTCATCAGTTTTGAGTGAACA 59.059 37.500 0.00 0.00 36.61 3.18
2361 2417 3.073062 AGCCTAGGTGTGTCATCAGTTTT 59.927 43.478 11.31 0.00 0.00 2.43
2366 2422 1.937191 TCAGCCTAGGTGTGTCATCA 58.063 50.000 11.31 0.00 32.43 3.07
2371 2427 3.788227 TTGATTTCAGCCTAGGTGTGT 57.212 42.857 11.31 0.00 32.43 3.72
2381 2437 7.483059 GCTCTGTATAGTTGTTTTGATTTCAGC 59.517 37.037 0.00 0.00 0.00 4.26
2395 2451 5.667539 TCTTTGCTGAGCTCTGTATAGTT 57.332 39.130 20.24 0.00 0.00 2.24
2400 2456 5.921962 TTCTATCTTTGCTGAGCTCTGTA 57.078 39.130 20.24 14.26 0.00 2.74
2406 2462 9.265901 TGAACTATATTTCTATCTTTGCTGAGC 57.734 33.333 0.00 0.00 0.00 4.26
2466 2522 8.233190 GTGTTGAAATTTGGTTGTCATTTTGAA 58.767 29.630 0.00 0.00 0.00 2.69
2505 2561 2.100605 ACTTCTTTCTCCATCGGCAC 57.899 50.000 0.00 0.00 0.00 5.01
2506 2562 2.859165 AACTTCTTTCTCCATCGGCA 57.141 45.000 0.00 0.00 0.00 5.69
2551 2607 5.546499 ACCACAAAAGGAAGATACAGAGGTA 59.454 40.000 0.00 0.00 0.00 3.08
2552 2608 4.351111 ACCACAAAAGGAAGATACAGAGGT 59.649 41.667 0.00 0.00 0.00 3.85
2553 2609 4.911390 ACCACAAAAGGAAGATACAGAGG 58.089 43.478 0.00 0.00 0.00 3.69
2554 2610 9.667107 TTATTACCACAAAAGGAAGATACAGAG 57.333 33.333 0.00 0.00 0.00 3.35
2555 2611 9.444600 GTTATTACCACAAAAGGAAGATACAGA 57.555 33.333 0.00 0.00 0.00 3.41
2556 2612 9.226606 TGTTATTACCACAAAAGGAAGATACAG 57.773 33.333 0.00 0.00 0.00 2.74
2557 2613 9.226606 CTGTTATTACCACAAAAGGAAGATACA 57.773 33.333 0.00 0.00 0.00 2.29
2558 2614 9.444600 TCTGTTATTACCACAAAAGGAAGATAC 57.555 33.333 0.00 0.00 0.00 2.24
2630 2686 4.632538 TCGGATATCACCATATGTAGCG 57.367 45.455 4.83 0.00 0.00 4.26
2638 2694 5.070446 TCTGCTAAACTTCGGATATCACCAT 59.930 40.000 4.83 0.00 0.00 3.55
2647 2703 6.469410 TCCTTTTTATCTGCTAAACTTCGGA 58.531 36.000 0.00 0.00 0.00 4.55
2654 2710 8.343168 TCGGATTTTCCTTTTTATCTGCTAAA 57.657 30.769 0.00 0.00 33.30 1.85
2660 2716 6.154363 TGCCATTCGGATTTTCCTTTTTATCT 59.846 34.615 0.00 0.00 33.30 1.98
2736 2792 6.488344 TCAGTTATACATGCCAAAACTGTGAA 59.512 34.615 20.86 7.91 44.60 3.18
2741 2797 5.882557 CCTCTCAGTTATACATGCCAAAACT 59.117 40.000 0.00 0.00 0.00 2.66
2742 2798 5.880332 TCCTCTCAGTTATACATGCCAAAAC 59.120 40.000 0.00 0.00 0.00 2.43
2810 2866 3.179443 TGCCTGATCACTTCGAATACC 57.821 47.619 0.00 0.00 0.00 2.73
2811 2867 4.184629 ACTTGCCTGATCACTTCGAATAC 58.815 43.478 0.00 0.00 0.00 1.89
2825 2881 3.181493 GCATAAGGATGTCAACTTGCCTG 60.181 47.826 4.01 1.62 35.30 4.85
2836 2892 3.067180 CAGGAAATTGCGCATAAGGATGT 59.933 43.478 12.75 0.00 35.30 3.06
2842 2898 5.888691 TTTCTACAGGAAATTGCGCATAA 57.111 34.783 12.75 0.00 38.81 1.90
2880 2952 7.338710 ACCTTTTCTTATGCTGCTAGTTCATA 58.661 34.615 0.00 0.00 0.00 2.15
2883 2955 6.149474 TCAACCTTTTCTTATGCTGCTAGTTC 59.851 38.462 0.00 0.00 0.00 3.01
2884 2956 6.003950 TCAACCTTTTCTTATGCTGCTAGTT 58.996 36.000 0.00 0.00 0.00 2.24
2885 2957 5.560724 TCAACCTTTTCTTATGCTGCTAGT 58.439 37.500 0.00 0.00 0.00 2.57
2919 2994 1.308998 GTGTTCATAAGCCCCGATGG 58.691 55.000 0.00 0.00 37.09 3.51
2920 2995 1.308998 GGTGTTCATAAGCCCCGATG 58.691 55.000 0.00 0.00 0.00 3.84
2921 2996 0.179056 CGGTGTTCATAAGCCCCGAT 60.179 55.000 0.00 0.00 37.66 4.18
2922 2997 1.219664 CGGTGTTCATAAGCCCCGA 59.780 57.895 0.00 0.00 37.66 5.14
2924 2999 0.252197 ACTCGGTGTTCATAAGCCCC 59.748 55.000 0.00 0.00 0.00 5.80
2930 3013 1.337728 CCAGCACACTCGGTGTTCATA 60.338 52.381 6.91 0.00 45.08 2.15
2938 3021 1.021202 TTTTGAACCAGCACACTCGG 58.979 50.000 0.00 0.00 0.00 4.63
2943 3026 5.236047 GCATTATTGTTTTTGAACCAGCACA 59.764 36.000 0.00 0.00 0.00 4.57
2947 3030 6.841443 TGTGCATTATTGTTTTTGAACCAG 57.159 33.333 0.00 0.00 0.00 4.00
2989 3076 3.562505 CGAGTATCCTACATTGCCGTAC 58.437 50.000 0.00 0.00 0.00 3.67
3004 3091 1.537638 CAGATGTAGCCGAGCGAGTAT 59.462 52.381 0.00 0.00 0.00 2.12
3021 3108 2.404215 GCTTCAGTAACTTGTCGCAGA 58.596 47.619 0.00 0.00 0.00 4.26
3025 3112 3.026630 TCAGGCTTCAGTAACTTGTCG 57.973 47.619 0.00 0.00 0.00 4.35
3039 3126 4.393155 TGCACGCGGAATCAGGCT 62.393 61.111 12.47 0.00 0.00 4.58
3085 3172 0.670854 GTCTCCCTTTGTCGCTCCAC 60.671 60.000 0.00 0.00 0.00 4.02
3133 3220 0.672711 GGGTGTACGCCTTGAACCTC 60.673 60.000 24.21 1.94 0.00 3.85
3193 3280 0.036732 GCCTCTGATGTGGTGTTCCA 59.963 55.000 0.00 0.00 42.05 3.53
3194 3281 0.678048 GGCCTCTGATGTGGTGTTCC 60.678 60.000 0.00 0.00 0.00 3.62
3195 3282 0.036732 TGGCCTCTGATGTGGTGTTC 59.963 55.000 3.32 0.00 0.00 3.18
3197 3284 0.837691 TCTGGCCTCTGATGTGGTGT 60.838 55.000 3.32 0.00 0.00 4.16
3202 3289 1.270414 CCACCTCTGGCCTCTGATGT 61.270 60.000 3.32 0.17 0.00 3.06
3235 3322 1.492176 CAGGGTCCATCTTATGCAGGT 59.508 52.381 0.00 0.00 0.00 4.00
3272 3359 2.666862 CCAACGCGGTGCCACTTA 60.667 61.111 21.21 0.00 0.00 2.24
3285 3372 0.804989 CTCCTTTGATCACGCCCAAC 59.195 55.000 0.00 0.00 0.00 3.77
3296 3383 7.719633 GGGTTGCTATAATACATTCTCCTTTGA 59.280 37.037 0.00 0.00 0.00 2.69
3347 3434 6.106673 ACGAGCTTACAACATTACAGCTAAT 58.893 36.000 0.00 0.00 40.97 1.73
3367 3454 1.704641 TCCATATCCAGGGTGACGAG 58.295 55.000 0.00 0.00 0.00 4.18
3370 3457 1.352352 CCCATCCATATCCAGGGTGAC 59.648 57.143 0.00 0.00 39.72 3.67
3383 3470 2.636380 ATCCCGTCCCATCCCATCCA 62.636 60.000 0.00 0.00 0.00 3.41
3384 3471 1.847968 ATCCCGTCCCATCCCATCC 60.848 63.158 0.00 0.00 0.00 3.51
3385 3472 1.376466 CATCCCGTCCCATCCCATC 59.624 63.158 0.00 0.00 0.00 3.51
3386 3473 2.833913 GCATCCCGTCCCATCCCAT 61.834 63.158 0.00 0.00 0.00 4.00
3387 3474 3.488569 GCATCCCGTCCCATCCCA 61.489 66.667 0.00 0.00 0.00 4.37
3388 3475 4.626081 CGCATCCCGTCCCATCCC 62.626 72.222 0.00 0.00 0.00 3.85
3389 3476 2.996168 CTTCGCATCCCGTCCCATCC 62.996 65.000 0.00 0.00 38.35 3.51
3390 3477 1.595382 CTTCGCATCCCGTCCCATC 60.595 63.158 0.00 0.00 38.35 3.51
3391 3478 2.505982 CTTCGCATCCCGTCCCAT 59.494 61.111 0.00 0.00 38.35 4.00
3392 3479 4.467084 GCTTCGCATCCCGTCCCA 62.467 66.667 0.00 0.00 38.35 4.37
3393 3480 4.467084 TGCTTCGCATCCCGTCCC 62.467 66.667 0.00 0.00 38.35 4.46
3394 3481 2.892425 CTGCTTCGCATCCCGTCC 60.892 66.667 0.00 0.00 38.13 4.79
3395 3482 1.880340 CTCTGCTTCGCATCCCGTC 60.880 63.158 0.00 0.00 38.13 4.79
3396 3483 2.185350 CTCTGCTTCGCATCCCGT 59.815 61.111 0.00 0.00 38.13 5.28
3397 3484 2.587194 CCTCTGCTTCGCATCCCG 60.587 66.667 0.00 0.00 38.13 5.14
3398 3485 1.227497 CTCCTCTGCTTCGCATCCC 60.227 63.158 0.00 0.00 38.13 3.85
3399 3486 0.529555 GTCTCCTCTGCTTCGCATCC 60.530 60.000 0.00 0.00 38.13 3.51
3400 3487 0.869454 CGTCTCCTCTGCTTCGCATC 60.869 60.000 0.00 0.00 38.13 3.91
3401 3488 1.140589 CGTCTCCTCTGCTTCGCAT 59.859 57.895 0.00 0.00 38.13 4.73
3402 3489 2.568612 CGTCTCCTCTGCTTCGCA 59.431 61.111 0.00 0.00 36.92 5.10
3403 3490 2.202676 CCGTCTCCTCTGCTTCGC 60.203 66.667 0.00 0.00 0.00 4.70
3404 3491 2.202676 GCCGTCTCCTCTGCTTCG 60.203 66.667 0.00 0.00 0.00 3.79
3405 3492 2.185608 GGCCGTCTCCTCTGCTTC 59.814 66.667 0.00 0.00 0.00 3.86
3406 3493 3.394836 GGGCCGTCTCCTCTGCTT 61.395 66.667 0.00 0.00 0.00 3.91
3409 3496 2.685380 AAGGGGCCGTCTCCTCTG 60.685 66.667 0.00 0.00 36.94 3.35
3410 3497 2.364448 GAAGGGGCCGTCTCCTCT 60.364 66.667 0.00 0.00 39.01 3.69
3411 3498 3.839432 CGAAGGGGCCGTCTCCTC 61.839 72.222 0.00 0.00 32.02 3.71
3450 3537 2.747855 GAAAGCACCTGGGAGGCG 60.748 66.667 0.00 0.00 39.63 5.52
3451 3538 2.361737 GGAAAGCACCTGGGAGGC 60.362 66.667 0.00 0.00 39.63 4.70
3452 3539 2.045926 CGGAAAGCACCTGGGAGG 60.046 66.667 0.00 0.00 42.49 4.30
3453 3540 2.045926 CCGGAAAGCACCTGGGAG 60.046 66.667 0.00 0.00 0.00 4.30
3454 3541 4.344865 GCCGGAAAGCACCTGGGA 62.345 66.667 5.05 0.00 0.00 4.37
3455 3542 4.351054 AGCCGGAAAGCACCTGGG 62.351 66.667 5.05 0.00 34.23 4.45
3456 3543 2.747855 GAGCCGGAAAGCACCTGG 60.748 66.667 5.05 0.00 34.23 4.45
3457 3544 2.747855 GGAGCCGGAAAGCACCTG 60.748 66.667 5.05 0.00 40.06 4.00
3458 3545 3.249189 TGGAGCCGGAAAGCACCT 61.249 61.111 5.05 0.00 43.23 4.00
3459 3546 3.056328 GTGGAGCCGGAAAGCACC 61.056 66.667 5.05 0.00 43.14 5.01
3460 3547 3.423154 CGTGGAGCCGGAAAGCAC 61.423 66.667 5.05 0.00 34.23 4.40
3487 3574 3.479269 GCGACGGAACTGCGGAAG 61.479 66.667 0.00 0.00 0.00 3.46
3512 3599 4.543590 TGCAACCCTCAAAACTGAAAAA 57.456 36.364 0.00 0.00 0.00 1.94
3513 3600 4.221703 TCTTGCAACCCTCAAAACTGAAAA 59.778 37.500 0.00 0.00 0.00 2.29
3514 3601 3.766591 TCTTGCAACCCTCAAAACTGAAA 59.233 39.130 0.00 0.00 0.00 2.69
3515 3602 3.360867 TCTTGCAACCCTCAAAACTGAA 58.639 40.909 0.00 0.00 0.00 3.02
3516 3603 3.011566 TCTTGCAACCCTCAAAACTGA 57.988 42.857 0.00 0.00 0.00 3.41
3517 3604 3.799281 TTCTTGCAACCCTCAAAACTG 57.201 42.857 0.00 0.00 0.00 3.16
3518 3605 3.428862 CGTTTCTTGCAACCCTCAAAACT 60.429 43.478 0.00 0.00 0.00 2.66
3519 3606 2.857748 CGTTTCTTGCAACCCTCAAAAC 59.142 45.455 0.00 0.00 0.00 2.43
3520 3607 2.159170 CCGTTTCTTGCAACCCTCAAAA 60.159 45.455 0.00 0.00 0.00 2.44
3521 3608 1.407258 CCGTTTCTTGCAACCCTCAAA 59.593 47.619 0.00 0.00 0.00 2.69
3522 3609 1.028905 CCGTTTCTTGCAACCCTCAA 58.971 50.000 0.00 0.00 0.00 3.02
3523 3610 0.181587 TCCGTTTCTTGCAACCCTCA 59.818 50.000 0.00 0.00 0.00 3.86
3524 3611 0.875059 CTCCGTTTCTTGCAACCCTC 59.125 55.000 0.00 0.00 0.00 4.30
3525 3612 0.537371 CCTCCGTTTCTTGCAACCCT 60.537 55.000 0.00 0.00 0.00 4.34
3526 3613 1.956802 CCTCCGTTTCTTGCAACCC 59.043 57.895 0.00 0.00 0.00 4.11
3527 3614 1.285950 GCCTCCGTTTCTTGCAACC 59.714 57.895 0.00 0.00 0.00 3.77
3528 3615 1.285950 GGCCTCCGTTTCTTGCAAC 59.714 57.895 0.00 0.00 0.00 4.17
3529 3616 2.258013 CGGCCTCCGTTTCTTGCAA 61.258 57.895 0.00 0.00 42.73 4.08
3530 3617 2.668212 CGGCCTCCGTTTCTTGCA 60.668 61.111 0.00 0.00 42.73 4.08
3531 3618 3.431725 CCGGCCTCCGTTTCTTGC 61.432 66.667 0.00 0.00 46.80 4.01
3532 3619 2.032071 ACCGGCCTCCGTTTCTTG 59.968 61.111 0.00 0.00 46.80 3.02
3533 3620 0.901580 TAGACCGGCCTCCGTTTCTT 60.902 55.000 0.00 0.00 46.80 2.52
3534 3621 0.686769 ATAGACCGGCCTCCGTTTCT 60.687 55.000 0.00 7.91 46.80 2.52
3535 3622 0.177373 AATAGACCGGCCTCCGTTTC 59.823 55.000 0.00 0.86 46.80 2.78
3536 3623 0.177373 GAATAGACCGGCCTCCGTTT 59.823 55.000 0.00 0.00 46.80 3.60
3537 3624 0.686769 AGAATAGACCGGCCTCCGTT 60.687 55.000 0.00 0.00 46.80 4.44
3538 3625 1.076192 AGAATAGACCGGCCTCCGT 60.076 57.895 0.00 0.00 46.80 4.69
3540 3627 0.389757 GACAGAATAGACCGGCCTCC 59.610 60.000 0.00 0.00 0.00 4.30
3541 3628 1.067821 CAGACAGAATAGACCGGCCTC 59.932 57.143 0.00 0.00 0.00 4.70
3542 3629 1.115467 CAGACAGAATAGACCGGCCT 58.885 55.000 0.00 0.00 0.00 5.19
3543 3630 0.105039 CCAGACAGAATAGACCGGCC 59.895 60.000 0.00 0.00 0.00 6.13
3544 3631 0.105039 CCCAGACAGAATAGACCGGC 59.895 60.000 0.00 0.00 0.00 6.13
3545 3632 0.105039 GCCCAGACAGAATAGACCGG 59.895 60.000 0.00 0.00 0.00 5.28
3546 3633 1.115467 AGCCCAGACAGAATAGACCG 58.885 55.000 0.00 0.00 0.00 4.79
3547 3634 2.237392 ACAAGCCCAGACAGAATAGACC 59.763 50.000 0.00 0.00 0.00 3.85
3548 3635 3.618690 ACAAGCCCAGACAGAATAGAC 57.381 47.619 0.00 0.00 0.00 2.59
3549 3636 3.582647 TGAACAAGCCCAGACAGAATAGA 59.417 43.478 0.00 0.00 0.00 1.98
3550 3637 3.942829 TGAACAAGCCCAGACAGAATAG 58.057 45.455 0.00 0.00 0.00 1.73
3551 3638 4.574674 ATGAACAAGCCCAGACAGAATA 57.425 40.909 0.00 0.00 0.00 1.75
3552 3639 2.957402 TGAACAAGCCCAGACAGAAT 57.043 45.000 0.00 0.00 0.00 2.40
3553 3640 2.957402 ATGAACAAGCCCAGACAGAA 57.043 45.000 0.00 0.00 0.00 3.02
3554 3641 5.455183 CCATATATGAACAAGCCCAGACAGA 60.455 44.000 14.54 0.00 0.00 3.41
3555 3642 4.758674 CCATATATGAACAAGCCCAGACAG 59.241 45.833 14.54 0.00 0.00 3.51
3556 3643 4.717877 CCATATATGAACAAGCCCAGACA 58.282 43.478 14.54 0.00 0.00 3.41
3557 3644 3.503748 GCCATATATGAACAAGCCCAGAC 59.496 47.826 14.54 0.00 0.00 3.51
3558 3645 3.498481 GGCCATATATGAACAAGCCCAGA 60.498 47.826 14.54 0.00 32.68 3.86
3559 3646 2.821969 GGCCATATATGAACAAGCCCAG 59.178 50.000 14.54 0.00 32.68 4.45
3560 3647 2.875296 GGCCATATATGAACAAGCCCA 58.125 47.619 14.54 0.00 32.68 5.36
3562 3649 2.875296 TGGGCCATATATGAACAAGCC 58.125 47.619 14.54 16.08 38.21 4.35
3563 3650 3.005791 GGTTGGGCCATATATGAACAAGC 59.994 47.826 14.54 18.08 37.17 4.01
3564 3651 3.253188 CGGTTGGGCCATATATGAACAAG 59.747 47.826 14.54 5.19 36.97 3.16
3565 3652 3.218453 CGGTTGGGCCATATATGAACAA 58.782 45.455 14.54 12.15 36.97 2.83
3566 3653 2.173782 ACGGTTGGGCCATATATGAACA 59.826 45.455 14.54 7.02 36.97 3.18
3567 3654 2.552315 CACGGTTGGGCCATATATGAAC 59.448 50.000 14.54 9.87 36.97 3.18
3568 3655 2.173782 ACACGGTTGGGCCATATATGAA 59.826 45.455 14.54 0.00 36.97 2.57
3569 3656 1.771854 ACACGGTTGGGCCATATATGA 59.228 47.619 14.54 0.00 36.97 2.15
3570 3657 2.270352 ACACGGTTGGGCCATATATG 57.730 50.000 7.26 6.95 36.97 1.78
3571 3658 4.650972 AATACACGGTTGGGCCATATAT 57.349 40.909 7.26 0.00 36.97 0.86
3572 3659 4.020039 CCTAATACACGGTTGGGCCATATA 60.020 45.833 7.26 0.00 36.97 0.86
3573 3660 3.244770 CCTAATACACGGTTGGGCCATAT 60.245 47.826 7.26 0.00 36.97 1.78
3574 3661 2.105134 CCTAATACACGGTTGGGCCATA 59.895 50.000 7.26 0.00 36.97 2.74
3575 3662 1.133915 CCTAATACACGGTTGGGCCAT 60.134 52.381 7.26 0.00 36.97 4.40
3576 3663 0.253610 CCTAATACACGGTTGGGCCA 59.746 55.000 0.00 0.00 36.97 5.36
3577 3664 1.099295 GCCTAATACACGGTTGGGCC 61.099 60.000 0.00 0.00 44.61 5.80
3578 3665 2.400911 GCCTAATACACGGTTGGGC 58.599 57.895 0.00 0.00 44.24 5.36
3579 3666 2.224209 CCTAGCCTAATACACGGTTGGG 60.224 54.545 0.00 0.00 0.00 4.12
3580 3667 2.224209 CCCTAGCCTAATACACGGTTGG 60.224 54.545 0.00 0.00 0.00 3.77
3581 3668 2.696707 TCCCTAGCCTAATACACGGTTG 59.303 50.000 0.00 0.00 0.00 3.77
3582 3669 3.036452 TCCCTAGCCTAATACACGGTT 57.964 47.619 0.00 0.00 0.00 4.44
3583 3670 2.761786 TCCCTAGCCTAATACACGGT 57.238 50.000 0.00 0.00 0.00 4.83
3584 3671 3.162666 TGATCCCTAGCCTAATACACGG 58.837 50.000 0.00 0.00 0.00 4.94
3585 3672 4.748892 CATGATCCCTAGCCTAATACACG 58.251 47.826 0.00 0.00 0.00 4.49
3586 3673 4.223923 AGCATGATCCCTAGCCTAATACAC 59.776 45.833 0.00 0.00 0.00 2.90
3587 3674 4.223700 CAGCATGATCCCTAGCCTAATACA 59.776 45.833 0.00 0.00 39.69 2.29
3588 3675 4.467795 TCAGCATGATCCCTAGCCTAATAC 59.532 45.833 0.00 0.00 42.56 1.89
3589 3676 4.687976 TCAGCATGATCCCTAGCCTAATA 58.312 43.478 0.00 0.00 42.56 0.98
3590 3677 3.524826 TCAGCATGATCCCTAGCCTAAT 58.475 45.455 0.00 0.00 42.56 1.73
3591 3678 2.976440 TCAGCATGATCCCTAGCCTAA 58.024 47.619 0.00 0.00 42.56 2.69
3592 3679 2.702270 TCAGCATGATCCCTAGCCTA 57.298 50.000 0.00 0.00 42.56 3.93
3593 3680 3.565979 TCAGCATGATCCCTAGCCT 57.434 52.632 0.00 0.00 42.56 4.58
3604 3691 5.180868 GGCTATAGGTTTTCTCATCAGCATG 59.819 44.000 1.04 0.00 37.54 4.06
3605 3692 5.312079 GGCTATAGGTTTTCTCATCAGCAT 58.688 41.667 1.04 0.00 0.00 3.79
3606 3693 4.708177 GGCTATAGGTTTTCTCATCAGCA 58.292 43.478 1.04 0.00 0.00 4.41
3607 3694 3.743396 CGGCTATAGGTTTTCTCATCAGC 59.257 47.826 1.04 0.00 0.00 4.26
3608 3695 4.202264 ACCGGCTATAGGTTTTCTCATCAG 60.202 45.833 0.00 0.00 39.29 2.90
3609 3696 3.709653 ACCGGCTATAGGTTTTCTCATCA 59.290 43.478 0.00 0.00 39.29 3.07
3610 3697 4.338379 ACCGGCTATAGGTTTTCTCATC 57.662 45.455 0.00 0.00 39.29 2.92
3619 3706 6.073314 TGTTTCTATAGAACCGGCTATAGGT 58.927 40.000 24.49 2.94 45.30 3.08
3620 3707 6.585695 TGTTTCTATAGAACCGGCTATAGG 57.414 41.667 24.49 13.30 45.30 2.57
3621 3708 6.531948 GCATGTTTCTATAGAACCGGCTATAG 59.468 42.308 21.42 21.42 46.03 1.31
3622 3709 6.395629 GCATGTTTCTATAGAACCGGCTATA 58.604 40.000 14.85 4.97 33.37 1.31
3623 3710 5.238583 GCATGTTTCTATAGAACCGGCTAT 58.761 41.667 14.85 3.87 35.39 2.97
3624 3711 4.628074 GCATGTTTCTATAGAACCGGCTA 58.372 43.478 14.85 0.00 33.13 3.93
3625 3712 3.467803 GCATGTTTCTATAGAACCGGCT 58.532 45.455 14.85 0.00 33.13 5.52
3628 3715 3.182572 GCTCGCATGTTTCTATAGAACCG 59.817 47.826 14.85 11.93 33.13 4.44
3633 3720 2.478134 GGCAGCTCGCATGTTTCTATAG 59.522 50.000 9.78 0.00 45.17 1.31
3635 3722 1.134280 AGGCAGCTCGCATGTTTCTAT 60.134 47.619 9.78 0.00 45.17 1.98
3638 3725 3.583383 AGGCAGCTCGCATGTTTC 58.417 55.556 9.78 0.00 45.17 2.78
3646 3733 4.598894 CGGATCCCAGGCAGCTCG 62.599 72.222 6.06 0.00 0.00 5.03
3654 3741 2.599645 CTTCCTGTGCCGGATCCCAG 62.600 65.000 5.05 7.46 32.02 4.45
3662 3749 0.040067 GAACTTTGCTTCCTGTGCCG 60.040 55.000 0.00 0.00 0.00 5.69
3663 3750 1.000938 CTGAACTTTGCTTCCTGTGCC 60.001 52.381 0.00 0.00 0.00 5.01
3666 3753 1.322442 GCCTGAACTTTGCTTCCTGT 58.678 50.000 0.00 0.00 0.00 4.00
3672 3759 0.251077 CCAGAGGCCTGAACTTTGCT 60.251 55.000 12.00 0.00 43.02 3.91
3675 3762 1.439543 ACTCCAGAGGCCTGAACTTT 58.560 50.000 12.00 0.00 43.02 2.66
3678 3765 1.267121 TGTACTCCAGAGGCCTGAAC 58.733 55.000 12.00 0.00 43.02 3.18
3683 3770 1.834263 ACAGATTGTACTCCAGAGGCC 59.166 52.381 0.00 0.00 0.00 5.19
3694 3781 7.277760 CGAGAATTGAATGGTGTACAGATTGTA 59.722 37.037 0.00 0.00 0.00 2.41
3696 3783 6.092670 ACGAGAATTGAATGGTGTACAGATTG 59.907 38.462 0.00 0.00 0.00 2.67
3702 3789 3.684788 AGCACGAGAATTGAATGGTGTAC 59.315 43.478 0.00 0.00 0.00 2.90
3705 3792 3.495193 CAAGCACGAGAATTGAATGGTG 58.505 45.455 0.00 0.00 0.00 4.17
3711 3798 0.322456 CCCCCAAGCACGAGAATTGA 60.322 55.000 0.00 0.00 0.00 2.57
3744 3831 3.151710 CATGGCCCACCCTGCATG 61.152 66.667 0.00 0.00 33.59 4.06
3750 3837 2.688299 AAATGCCATGGCCCACCC 60.688 61.111 33.44 6.02 41.09 4.61
3752 3839 2.902584 GGAAATGCCATGGCCCAC 59.097 61.111 33.44 20.44 41.09 4.61
3756 3843 3.539791 CCCCGGAAATGCCATGGC 61.540 66.667 30.54 30.54 42.35 4.40
3774 3861 0.030235 TCCTTATGATCACGGCGTCG 59.970 55.000 10.85 8.42 43.02 5.12
3777 3864 3.057526 TCATAGTCCTTATGATCACGGCG 60.058 47.826 4.80 4.80 42.48 6.46
3789 3876 1.192428 GTCACCCCGTCATAGTCCTT 58.808 55.000 0.00 0.00 0.00 3.36
3791 3878 0.899720 TTGTCACCCCGTCATAGTCC 59.100 55.000 0.00 0.00 0.00 3.85
3792 3879 2.740447 GTTTTGTCACCCCGTCATAGTC 59.260 50.000 0.00 0.00 0.00 2.59
3793 3880 2.551504 GGTTTTGTCACCCCGTCATAGT 60.552 50.000 0.00 0.00 0.00 2.12
3800 3888 0.538516 TGGATGGTTTTGTCACCCCG 60.539 55.000 0.00 0.00 35.73 5.73
3804 3892 4.549458 CTGATTGTGGATGGTTTTGTCAC 58.451 43.478 0.00 0.00 0.00 3.67
3806 3894 3.614870 GCCTGATTGTGGATGGTTTTGTC 60.615 47.826 0.00 0.00 0.00 3.18
3812 3900 1.355381 TCAAGCCTGATTGTGGATGGT 59.645 47.619 0.00 0.00 0.00 3.55
3815 3903 2.440409 GTGTCAAGCCTGATTGTGGAT 58.560 47.619 0.00 0.00 33.05 3.41
3822 3910 4.574674 TTTCTATGGTGTCAAGCCTGAT 57.425 40.909 0.00 0.00 33.05 2.90
3824 3912 5.240183 CCATATTTCTATGGTGTCAAGCCTG 59.760 44.000 3.89 0.00 46.46 4.85
3825 3913 5.380043 CCATATTTCTATGGTGTCAAGCCT 58.620 41.667 3.89 0.00 46.46 4.58
3839 3927 7.503566 ACGTCATGAATTTGGATCCATATTTCT 59.496 33.333 25.47 15.78 30.05 2.52
3845 3933 4.339247 GGAACGTCATGAATTTGGATCCAT 59.661 41.667 17.06 0.00 0.00 3.41
3866 3954 1.754803 AGATGAGCGTACAAATCGGGA 59.245 47.619 0.00 0.00 0.00 5.14
3869 3957 3.975670 GGACTAGATGAGCGTACAAATCG 59.024 47.826 0.00 0.00 0.00 3.34
3870 3958 4.202121 TGGGACTAGATGAGCGTACAAATC 60.202 45.833 0.00 0.00 0.00 2.17
3872 3960 3.093814 TGGGACTAGATGAGCGTACAAA 58.906 45.455 0.00 0.00 0.00 2.83
3875 3963 2.022195 TGTGGGACTAGATGAGCGTAC 58.978 52.381 0.00 0.00 0.00 3.67
3881 3969 2.091610 AGCTAGCTGTGGGACTAGATGA 60.092 50.000 18.57 0.00 38.53 2.92
3887 3975 2.664081 GGCAGCTAGCTGTGGGACT 61.664 63.158 37.91 4.75 45.24 3.85
3890 3978 1.748122 CTTGGCAGCTAGCTGTGGG 60.748 63.158 37.91 24.04 45.24 4.61
3894 3982 1.748122 CCACCTTGGCAGCTAGCTG 60.748 63.158 35.54 35.54 46.15 4.24
3895 3983 2.673523 CCACCTTGGCAGCTAGCT 59.326 61.111 12.68 12.68 44.79 3.32
3896 3984 2.439156 CCCACCTTGGCAGCTAGC 60.439 66.667 6.62 6.62 44.65 3.42
3899 3987 2.703675 CTTCACCCACCTTGGCAGCT 62.704 60.000 0.00 0.00 35.79 4.24
3901 3989 0.468029 AACTTCACCCACCTTGGCAG 60.468 55.000 0.00 0.00 35.79 4.85
3902 3990 0.032615 AAACTTCACCCACCTTGGCA 60.033 50.000 0.00 0.00 35.79 4.92
3905 3993 3.194542 TGAACAAAACTTCACCCACCTTG 59.805 43.478 0.00 0.00 0.00 3.61
3914 4002 1.673920 GGCTCGGTGAACAAAACTTCA 59.326 47.619 0.00 0.00 0.00 3.02
3917 4005 0.182775 AGGGCTCGGTGAACAAAACT 59.817 50.000 0.00 0.00 0.00 2.66
3920 4008 1.001633 GACTAGGGCTCGGTGAACAAA 59.998 52.381 0.00 0.00 0.00 2.83
3929 4017 1.817209 GTCTTGGGACTAGGGCTCG 59.183 63.158 0.00 0.00 39.24 5.03
3938 4026 2.055299 TCCCGTGAAGTCTTGGGAC 58.945 57.895 5.27 0.00 45.66 4.46
3941 4029 2.256117 AGTTTCCCGTGAAGTCTTGG 57.744 50.000 0.00 0.00 0.00 3.61
3952 4040 3.359654 CAAACACGAAAGAAGTTTCCCG 58.640 45.455 0.00 0.00 39.22 5.14
3956 4044 4.794278 AACCCAAACACGAAAGAAGTTT 57.206 36.364 0.00 0.00 41.05 2.66
3959 4047 5.744666 TTCTAACCCAAACACGAAAGAAG 57.255 39.130 0.00 0.00 0.00 2.85
3964 4052 5.533154 ACATTGATTCTAACCCAAACACGAA 59.467 36.000 0.00 0.00 0.00 3.85
3968 4056 5.830457 TGTCACATTGATTCTAACCCAAACA 59.170 36.000 0.00 0.00 0.00 2.83
3977 4065 9.076781 TCAAAGGATTTTGTCACATTGATTCTA 57.923 29.630 0.00 0.00 43.33 2.10
3980 4068 8.961294 TTTCAAAGGATTTTGTCACATTGATT 57.039 26.923 0.00 0.00 43.33 2.57
3989 4077 5.236263 ACCGCATTTTTCAAAGGATTTTGTC 59.764 36.000 0.56 0.00 43.33 3.18
3990 4078 5.007528 CACCGCATTTTTCAAAGGATTTTGT 59.992 36.000 0.56 0.00 43.33 2.83
3992 4080 5.122519 ACACCGCATTTTTCAAAGGATTTT 58.877 33.333 0.00 0.00 35.03 1.82
3996 4084 2.955660 AGACACCGCATTTTTCAAAGGA 59.044 40.909 0.00 0.00 0.00 3.36
4000 4088 5.163663 GGATCATAGACACCGCATTTTTCAA 60.164 40.000 0.00 0.00 0.00 2.69
4002 4090 4.552767 CGGATCATAGACACCGCATTTTTC 60.553 45.833 0.00 0.00 38.98 2.29
4005 4093 2.102420 TCGGATCATAGACACCGCATTT 59.898 45.455 0.00 0.00 44.19 2.32
4008 4096 0.668535 CTCGGATCATAGACACCGCA 59.331 55.000 0.00 0.00 44.19 5.69
4011 4099 2.894126 ACCATCTCGGATCATAGACACC 59.106 50.000 0.00 0.00 38.63 4.16
4014 4102 2.297315 TGCACCATCTCGGATCATAGAC 59.703 50.000 0.00 0.00 38.63 2.59
4017 4105 1.000274 CGTGCACCATCTCGGATCATA 60.000 52.381 12.15 0.00 38.63 2.15
4023 4111 4.758251 TGGCGTGCACCATCTCGG 62.758 66.667 12.15 0.00 42.50 4.63
4026 4114 1.153289 GATCTGGCGTGCACCATCT 60.153 57.895 12.15 0.00 39.54 2.90
4027 4115 0.104855 TAGATCTGGCGTGCACCATC 59.895 55.000 12.15 5.38 39.54 3.51
4032 4120 3.819564 ACTTTATAGATCTGGCGTGCA 57.180 42.857 5.18 0.00 0.00 4.57
4033 4121 5.753921 ACTTTACTTTATAGATCTGGCGTGC 59.246 40.000 5.18 0.00 0.00 5.34
4034 4122 8.916654 CATACTTTACTTTATAGATCTGGCGTG 58.083 37.037 5.18 0.00 0.00 5.34
4035 4123 8.857098 TCATACTTTACTTTATAGATCTGGCGT 58.143 33.333 5.18 0.00 0.00 5.68
4036 4124 9.347934 CTCATACTTTACTTTATAGATCTGGCG 57.652 37.037 5.18 0.00 0.00 5.69
4047 4135 9.023962 TCCGGTAGTTTCTCATACTTTACTTTA 57.976 33.333 0.00 0.00 0.00 1.85
4053 4141 6.942976 TCAATCCGGTAGTTTCTCATACTTT 58.057 36.000 0.00 0.00 0.00 2.66
4055 4143 6.516718 CATCAATCCGGTAGTTTCTCATACT 58.483 40.000 0.00 0.00 0.00 2.12
4056 4144 5.177696 GCATCAATCCGGTAGTTTCTCATAC 59.822 44.000 0.00 0.00 0.00 2.39
4059 4147 3.531538 GCATCAATCCGGTAGTTTCTCA 58.468 45.455 0.00 0.00 0.00 3.27
4060 4148 2.540101 CGCATCAATCCGGTAGTTTCTC 59.460 50.000 0.00 0.00 0.00 2.87
4065 4153 1.227556 GGCGCATCAATCCGGTAGT 60.228 57.895 10.83 0.00 0.00 2.73
4066 4154 2.310233 CGGCGCATCAATCCGGTAG 61.310 63.158 10.83 0.00 39.52 3.18
4068 4156 3.969250 AACGGCGCATCAATCCGGT 62.969 57.895 10.83 0.00 46.78 5.28
4077 4165 1.305219 ACATGCTACAAACGGCGCAT 61.305 50.000 10.83 0.00 43.29 4.73
4080 4168 0.454285 CCAACATGCTACAAACGGCG 60.454 55.000 4.80 4.80 0.00 6.46
4083 4171 0.109319 GCCCCAACATGCTACAAACG 60.109 55.000 0.00 0.00 0.00 3.60
4090 4178 0.763986 AAAAGGTGCCCCAACATGCT 60.764 50.000 0.00 0.00 0.00 3.79
4092 4180 1.047002 TGAAAAGGTGCCCCAACATG 58.953 50.000 0.00 0.00 0.00 3.21
4093 4181 1.693606 CTTGAAAAGGTGCCCCAACAT 59.306 47.619 0.00 0.00 41.27 2.71
4106 4194 2.625790 CCGTTTCCATGTCCCTTGAAAA 59.374 45.455 0.00 0.00 0.00 2.29
4107 4195 2.235016 CCGTTTCCATGTCCCTTGAAA 58.765 47.619 0.00 0.00 0.00 2.69
4115 4203 1.749258 GCCTCCCCGTTTCCATGTC 60.749 63.158 0.00 0.00 0.00 3.06
4116 4204 2.355115 GCCTCCCCGTTTCCATGT 59.645 61.111 0.00 0.00 0.00 3.21
4122 4210 1.909781 TACTCACGCCTCCCCGTTT 60.910 57.895 0.00 0.00 39.83 3.60
4125 4213 2.642254 TTGTACTCACGCCTCCCCG 61.642 63.158 0.00 0.00 0.00 5.73
4129 4217 1.000506 TGGAAGTTGTACTCACGCCTC 59.999 52.381 0.00 0.00 0.00 4.70
4130 4218 1.045407 TGGAAGTTGTACTCACGCCT 58.955 50.000 0.00 0.00 0.00 5.52
4131 4219 2.094762 ATGGAAGTTGTACTCACGCC 57.905 50.000 0.00 0.00 0.00 5.68
4132 4220 3.120304 GGAAATGGAAGTTGTACTCACGC 60.120 47.826 0.00 0.00 0.00 5.34
4133 4221 4.062293 TGGAAATGGAAGTTGTACTCACG 58.938 43.478 0.00 0.00 0.00 4.35
4134 4222 4.084013 CGTGGAAATGGAAGTTGTACTCAC 60.084 45.833 0.00 0.00 0.00 3.51
4135 4223 4.062293 CGTGGAAATGGAAGTTGTACTCA 58.938 43.478 0.00 0.00 0.00 3.41
4136 4224 4.062991 ACGTGGAAATGGAAGTTGTACTC 58.937 43.478 0.00 0.00 0.00 2.59
4137 4225 3.813166 CACGTGGAAATGGAAGTTGTACT 59.187 43.478 7.95 0.00 0.00 2.73
4138 4226 3.058501 CCACGTGGAAATGGAAGTTGTAC 60.059 47.826 31.31 0.00 38.34 2.90
4139 4227 3.142951 CCACGTGGAAATGGAAGTTGTA 58.857 45.455 31.31 0.00 38.34 2.41
4140 4228 1.953686 CCACGTGGAAATGGAAGTTGT 59.046 47.619 31.31 0.00 38.34 3.32
4141 4229 1.269448 CCCACGTGGAAATGGAAGTTG 59.731 52.381 36.07 10.43 38.34 3.16
4142 4230 1.133606 ACCCACGTGGAAATGGAAGTT 60.134 47.619 36.07 4.55 38.34 2.66
4143 4231 0.476771 ACCCACGTGGAAATGGAAGT 59.523 50.000 36.07 18.89 38.34 3.01
4144 4232 0.881118 CACCCACGTGGAAATGGAAG 59.119 55.000 36.07 18.20 38.34 3.46
4145 4233 3.028916 CACCCACGTGGAAATGGAA 57.971 52.632 36.07 0.00 38.34 3.53
4146 4234 4.811206 CACCCACGTGGAAATGGA 57.189 55.556 36.07 0.00 38.34 3.41
4154 4242 2.282110 TCAATGGCCACCCACGTG 60.282 61.111 8.16 9.08 45.77 4.49
4155 4243 1.852157 ATCTCAATGGCCACCCACGT 61.852 55.000 8.16 0.00 45.77 4.49
4156 4244 1.077501 ATCTCAATGGCCACCCACG 60.078 57.895 8.16 0.00 45.77 4.94
4157 4245 0.323725 ACATCTCAATGGCCACCCAC 60.324 55.000 8.16 0.00 45.77 4.61
4159 4247 0.034186 TCACATCTCAATGGCCACCC 60.034 55.000 8.16 0.00 37.19 4.61
4160 4248 1.952296 GATCACATCTCAATGGCCACC 59.048 52.381 8.16 0.00 37.19 4.61
4161 4249 1.600957 CGATCACATCTCAATGGCCAC 59.399 52.381 8.16 0.00 37.19 5.01
4162 4250 1.485895 TCGATCACATCTCAATGGCCA 59.514 47.619 8.56 8.56 37.19 5.36
4163 4251 2.245159 TCGATCACATCTCAATGGCC 57.755 50.000 0.00 0.00 37.19 5.36
4164 4252 3.201290 ACTTCGATCACATCTCAATGGC 58.799 45.455 0.00 0.00 37.19 4.40
4165 4253 5.595885 AGTACTTCGATCACATCTCAATGG 58.404 41.667 0.00 0.00 37.19 3.16
4166 4254 6.746104 GAGTACTTCGATCACATCTCAATG 57.254 41.667 0.00 0.00 38.93 2.82
4181 4269 1.473278 CCCTGTGTCCTCGAGTACTTC 59.527 57.143 12.31 4.52 0.00 3.01
4182 4270 1.075050 TCCCTGTGTCCTCGAGTACTT 59.925 52.381 12.31 0.00 0.00 2.24
4183 4271 0.697079 TCCCTGTGTCCTCGAGTACT 59.303 55.000 12.31 0.00 0.00 2.73
4184 4272 1.096416 CTCCCTGTGTCCTCGAGTAC 58.904 60.000 12.31 6.42 0.00 2.73
4185 4273 0.034380 CCTCCCTGTGTCCTCGAGTA 60.034 60.000 12.31 0.00 0.00 2.59
4186 4274 1.304547 CCTCCCTGTGTCCTCGAGT 60.305 63.158 12.31 0.00 0.00 4.18
4187 4275 2.716017 GCCTCCCTGTGTCCTCGAG 61.716 68.421 5.13 5.13 0.00 4.04
4188 4276 2.680352 GCCTCCCTGTGTCCTCGA 60.680 66.667 0.00 0.00 0.00 4.04
4189 4277 4.135153 CGCCTCCCTGTGTCCTCG 62.135 72.222 0.00 0.00 0.00 4.63
4190 4278 2.997897 ACGCCTCCCTGTGTCCTC 60.998 66.667 0.00 0.00 0.00 3.71
4191 4279 3.314331 CACGCCTCCCTGTGTCCT 61.314 66.667 0.00 0.00 0.00 3.85
4193 4281 3.612247 ATGCACGCCTCCCTGTGTC 62.612 63.158 0.00 0.00 38.36 3.67
4194 4282 3.640407 ATGCACGCCTCCCTGTGT 61.640 61.111 0.00 0.00 38.36 3.72
4195 4283 3.129502 CATGCACGCCTCCCTGTG 61.130 66.667 0.00 0.00 39.10 3.66
4196 4284 4.415150 CCATGCACGCCTCCCTGT 62.415 66.667 0.00 0.00 0.00 4.00
4197 4285 4.415150 ACCATGCACGCCTCCCTG 62.415 66.667 0.00 0.00 0.00 4.45
4198 4286 4.101448 GACCATGCACGCCTCCCT 62.101 66.667 0.00 0.00 0.00 4.20
4200 4288 4.760047 ACGACCATGCACGCCTCC 62.760 66.667 9.10 0.00 0.00 4.30
4201 4289 3.188786 GACGACCATGCACGCCTC 61.189 66.667 9.10 0.00 0.00 4.70
4206 4294 3.490759 CAGCCGACGACCATGCAC 61.491 66.667 0.00 0.00 0.00 4.57
4207 4295 2.520465 AATCAGCCGACGACCATGCA 62.520 55.000 0.00 0.00 0.00 3.96
4208 4296 1.766143 GAATCAGCCGACGACCATGC 61.766 60.000 0.00 0.00 0.00 4.06
4209 4297 0.460109 TGAATCAGCCGACGACCATG 60.460 55.000 0.00 0.00 0.00 3.66
4210 4298 0.179100 CTGAATCAGCCGACGACCAT 60.179 55.000 0.00 0.00 0.00 3.55
4211 4299 1.215382 CTGAATCAGCCGACGACCA 59.785 57.895 0.00 0.00 0.00 4.02
4212 4300 4.094684 CTGAATCAGCCGACGACC 57.905 61.111 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.