>input_sequence_35827
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------ATGGCAACAATTGAGAT
GGAGGACTTCTCTGGCCAGCAGCTCTGGGTTTTCATCATACTGATGATATTGGGAGGAGAAGTGTTCACTTCTATGGTAG
GGCTGCACTTCAAAAATGCTCGGGCCAACACTGAGGATGCTCTCCAGACAAGATTGGCTTTCATAAGCAGGGACATCGAA
TCCTCTGATGATTTCAACAACAGCAGTCAGAATTATATGGAAGGCATCCAGTCAGAGGAAACCATGCCGCACAATCAGGT
ACAGGAAAGCAAAGGGATGAATCATAAATCTCGCAATATTTTGGCTCATGTAGTAGCAGGCTATTTCATAGCAGCAATAG
TTTGCAGCTCTCTTGTCATCACCATCTTCCTTTGGATTGATTCCTATGCAAGGCATCTACTGAAGAGTAAACATATCAAA
ATGTGGACATTCTCAATCTTCACAGCAGTATCATCATTTGCAAACTGCGGCTTCACTCCGTTAAATGATAGCATGGCAAT
TTTCAAACATAACCCGACTTTCCTTCTTCTAGTTACCCCACAGATTCTTGTAGGCAACACTTTGTTTGCACCACTGTTGA
GGTTAAGCATATGGACCTTGGGAAAGGTGAGCAGCAGAGAAGAGTACGCTTACATCCTTCAGCACCCAAAGGAGATTGGA
TACAGGCATTTGCAACCTTATAAGAATTCTGTCAAATTGGTTCTGACTGGAGTGATGCTAATTTTGCTGCAAGCGATGCT
TATTTGCTATTTCGAATGGGATTCGAAGTCCTTGGAGGGAATGGGATGGTTCCAGAAATTGATAGGCTCGCTGTTCCAGA
GTGCCGATTCAAGACACGCTGGTGAAACTGTCATTAACATCTCGACCCTTTCTCCACCGATTATGGTGATATTTGCACTT
GCCATGTGAGTATCCCTTAATAATTTACTTAAGTTCAATAGCATACTTAGGTTAGCTCTTACTGATAGCACGTATTACCT
GGAGCAATATGACTATCTGAACCTTTA--TTTAGTTATTTTGCATGACTTTCTGAACAATGACAATAACA----------
--------------------AAACAGCATAAATCTGAACCAAGATCAAATCTGTACCTTAATTATGGTCTGAAGTGGACA
AGAGCTATTACTGAGAAAATAAGGCAAAACTAGTTATCATAGCTTGCAACATACCAGTCTTACATTCTCGCAAGGGTTTG
AAAGATAATAACACATTAGCAGCTGAACATGCCTTATTCTACTAGACCAAAATAACAAAAAAAATCGGGAAATTCAAAGA
TCTTTACGTTTCATTGCATTGAAGAGAAGGGATAGTACAATCCTCCTAGGAGGCTGGGGTTACAAAGATCAAACCAAAAT
AAGAAATTGTTCACTCAAAACTGATGACACACCTAGGCTGAAATCAAAACAACTATACAGAGCTCAGCAAAGATAGAAAT
ATAGTTCATTTCAGAGCAACAGGTTCAGGAAAACCAAGAAGTTCAAAATGACAACCAAATTTCAACACCAGGATATAATA
GTGCCGATGGAGAAAGAAGTTTTTTCTAGAACAAGTGCCGCTGTGTTACCTCTGTATCTTCCTTTTGTGGTAATAACAGA
TCATGGGCTTATTTGCAGGTACCTTCCTTCTGGTACTTCAATCCTCGCTACATATGGTGATATCCGAAGTTTAGCAGATA
AAAAGGAAAATCCGAATGGCAGAGCAACGTGGAAGAAGTTTGCCATGACCAAGCGTACTTGTTTAGTAATATTCACAGTT
TTGGCATGTATAACTGAGAGGAAGTCAATGACTGCCGATCCACTCAATTTCAGCATCTTCAGCGTGGTATTCGAAGTGAT
CAGGCAAGTTGACATCCTTATGCGCAATTTCCTGTAGAAATAA----------------TAGATGGATAAATATGAA---
CTAGCAGCATAAGAAAAGGTTGAGCTAATCTTGCCATCGG--------GGCTTATGAACACCGAGTGTGCTGGTTCAAAA
ACAATA----ATGCACATTTCTCTTTTTGCAGCGCGTACGGCAATGTAGGATACTCGCTCGGCTACATCTGCGACAAGTT
ACTGAAGCCTGATTCCGCGTGCAGAGACGCCTCGTACGGGTTCGTCGGCAGGTGGAGCGACAAAGGGAGACTGATCGTCA
TCCTGGTGATGTTCCTCGGGAGGTTCAAGGCGTACACCCTCAAAGGGAAGAAAACCCTGAATGTGCATCCATGTAGAAGT
GGAACACCACATCAGAGGCCAGAGGTGGCTGGAAATTAG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>chr2D_1_TraesCS2D01G428500
TCCACTTATCCCAACCCGCACTAATAATTGAAACTATAACCAAGAGAATGCAAATGTTGCAACGCAACTTCACAATCGGC
ATTTATTTCAGTCATTGCAGTCGTGTCTCCTCCGAGGAGCATTACAGAACACTAGATAGATCATATTGCAGTAGCGCGTT
TACAGGGTAGTGAATTTCAGCATCACAATACACTAGTGAATACAGCTAGAAAAGTAGTGCCAAACCAAAATAATGCAACT
TTACTTTGCAGGATCAAGTGTAAAATAATAACTGAACATAAAATCAGTGCGAAGATAAAGTGCTGAAATTAAATCAACAA
TATCCTCAGATCCAAAAATTGTTGAATGAAGGATGATAATTGCCCAAAATCGTTTCAATCGGGTCATAAAGTAGTTGAAT
GTTTTAATAATAGAGGCACATGCGTGTCCATGCATCAATTGTACCTGTGACCGGGCCCTTGTGGACACAATCAGCATCAT
GATTGTACAGGTGGACACACTTGTCTTACTCCACCCTACATATTGAGCACCAGAACTTGATCGTGTTGGGCAATGCTTGC
AGGTGGGAATACTTAACCCATAAGACACCATGAAAA-CACAGCTTCCAGTTGCCAGGTCCAGCACTTCCATGTCTGAACT
CAAAAGCCCACAAACCTCGATGCATCGATTCAGCTCAGCTCTAGTTATCCTGCAGAATCTGCCATCGCGTACAGCCATGA
AGGCTGAAGCTCCCATTATTCAGTTTGGAAGCGCTTAGAGTCACCAAGGAGATGGTGAAGCATTTCCATGAGTTTGTGTC
CAGAAGGCTCGGTTCCCTCTCCAAGTGTACAGCAGATTTATTCAGACGCTCTTACTTGTTTCTGGTATTCAAAAGCAATC
CTTTGGTAGTCCAGCA----------------------TTTGCTGGTTTCCTTGCTCTGAAGAACCTCGCGCCACTGAAT
AAGCCATCTCCAAGGAACTTGGATCTGATATTCACCTCTGTGTCCACAGTGACGGTGTCAAGCATGGCAACAATTGAGAT
GGAGGACTTCTCTGGCCAGCAGCTCTGGGTTTTCATCATACTGATGATATTGGGAGGAGAAGTGTTCACTTCTATGGTAG
GGCTGCACTTCAAAAATGCTCGGGCCAACACTGAGGATGCTCTCCAGACAAGATTGGCTTTCATAAGCAGGGACATCGAA
TCCTCTGATGATTTCAACAACAGCAGTCAGAATTATATGGAAGGCATCCAGTCAGAGGAAACCATGCCGCACAATCAGGT
ACAGGAAAGCAAAGGGATGAATCATAAATCTCGCAATATTTTGGCTCATGTAGTAGCAGGCTATTTCATAGCAGCAATAG
TTTGCAGCTCTCTTGTCATCACCATCTTCCTTTGGATTGATTCCTATGCAAGGCATCTACTGAAGAGTAAACATATCAAA
ATGTGGACATTCTCAATCTTCACAGCAGTATCATCATTTGCAAACTGCGGCTTCACTCCGTTAAATGATAGCATGGCAAT
TTTCAAACATAACCCGACTTTCCTTCTTCTAGTTACCCCACAGATTCTTGTAGGCAACACTTTGTTTGCACCACTGTTGA
GGTTAAGCATATGGACCTTGGGAAAGGTGAGCAGCAGAGAAGAGTACGCTTACATCCTTCAGCACCCAAAGGAGATTGGA
TACAGGCATTTGCAACCTTATAAGAATTCTGTCAAATTGGTTCTGACTGGAGTGATGCTAATTTTGCTGCAAGCGATGCT
TATTTGCTATTTCGAATGGGATTCGAAGTCCTTGGAGGGAATGGGATGGTTCCAGAAATTGATAGGCTCGCTGTTCCAGA
GTGCCGATTCAAGACACGCTGGTGAAACTGTCATTAACATCTCGACCCTTTCTCCACCGATTATGGTGATATTTGCACTT
GCCATGTGAGTATCCCTTAATAATTTACTTAAGTTCAATAGCATACTTAGGTTAGCTCTTACTGATAGCACGTATTACCT
GGAGCAATATGACTATCTGAACCTTTA--TTTAGTTATTTTGCATGACTTTCTGAACAATGACAATAACA----------
--------------------AAACAGCATAAATCTGAACCAAGATCAAATCTGTACCTTAATTATGGTCTGAAGTGGACA
AGAGCTATTACTGAGAAAATAAGGCAAAACTAGTTATCATAGCTTGCAACATACCAGTCTTACATTCTCGCAAGGGTTTG
AAAGATAATAACACATTAGCAGCTGAACATGCCTTATTCTACTAGACCAAAATAACAAAAAAAATCGGGAAATTCAAAGA
TCTTTACGTTTCATTGCATTGAAGAGAAGGGATAGTACAATCCTCCTAGGAGGCTGGGGTTACAAAGATCAAACCAAAAT
AAGAAATTGTTCACTCAAAACTGATGACACACCTAGGCTGAAATCAAAACAACTATACAGAGCTCAGCAAAGATAGAAAT
ATAGTTCATTTCAGAGCAACAGGTTCAGGAAAACCAAGAAGTTCAAAATGACAACCAAATTTCAACACCAGGATATAATA
GTGCCGATGGAGAAAGAAGTTTTTTCTAGAACAAGTGCCGCTGTGTTACCTCTGTATCTTCCTTTTGTGGTAATAACAGA
TCATGGGCTTATTTGCAGGTACCTTCCTTCTGGTACTTCAATCCTCGCTACATATGGTGATATCCGAAGTTTAGCAGATA
AAAAGGAAAATCCGAATGGCAGAGCAACGTGGAAGAAGTTTGCCATGACCAAGCGTACTTGTTTAGTAATATTCACAGTT
TTGGCATGTATAACTGAGAGGAAGTCAATGACTGCCGATCCACTCAATTTCAGCATCTTCAGCGTGGTATTCGAAGTGAT
CAGGCAAGTTGACATCCTTATGCGCAATTTCCTGTAGAAATAA----------------TAGATGGATAAATATGAA---
CTAGCAGCATAAGAAAAGGTTGAGCTAATCTTGCCATCGG--------GGCTTATGAACACCGAGTGTGCTGGTTCAAAA
ACAATA----ATGCACATTTCTCTTTTTGCAGCGCGTACGGCAATGTAGGATACTCGCTCGGCTACATCTGCGACAAGTT
ACTGAAGCCTGATTCCGCGTGCAGAGACGCCTCGTACGGGTTCGTCGGCAGGTGGAGCGACAAAGGGAGACTGATCGTCA
TCCTGGTGATGTTCCTCGGGAGGTTCAAGGCGTACACCCTCAAAGGGAAGAAAACCCTGAATGTGCATCCATGTAGAAGT
GGAACACCACATCAGAGGCCAGAGGTGGCTGGAAATTAGGAACCTGCATAAGATGGACCCTGAGCGTGTAGATCGGCTTA
AGTGGCACCGCGTTGGGCGTGATCAAAGGAGAATGTATTATAGCAACCCTAAAAGACCAGGGATGCTCATAGCATTAGCT
GTAATGTTGTAAGCTCGTCACCCTGGATATGGATGGGATGGGACGGGATGCGAAGCAGAGGAGACGGCCCCTTCGGCGAG
GGAGACCGAGCCCCCGCGCCTCCCAGGTGCTTTCCGGCTCCACGGACATCCGGCTTCCGCAGTTCCGTCGCCGGGGCTTT
TTTCAGTTTTGAGGGTTGCAAGAAACGGAGGCCGGTCTATTCTGTCTGGGCTTGTTCATATATGGCCCAACCGTGTATTA
GGCTAGGGATCATGCTGATGAGAAAACCTATAGCCGGTTCTATAGAAACATGCGAGCTGCCTGGGATCCGGCACAGGAAG
CAAAGTTCAGGCCTCTGGAGTACAATCTGTACACCATTCAATTCTCGTGCTTGGGGGATTGGGAGAGAGTCATGCAGGGT
GGGCCATGGCATTTCCGGGGCGACGCCGTGATCATAAGGAC-TATGACGGGGTGACAAAACCATCCACAATCAGGCTTGA
CACCATAGAAATATGGATCCAAATTCATGACGTTCCCGATTTGTACGCTCATCTAGTCCCACAGCTAGCTGCCAAGGTGG
GTGAAGTTTTGTTCACCGAGCCCTAGTCCCAAGACTTCACGGGAAACTTCTTTCGTGTTTGGGTTAGAATCAATGTGACA
AAATCCTTTGAAAAATGCGGTGTCTATGATCCGAGATGGTGCACGCCAGATCTATAAAGTAAAGTATGAGAAACTACCGG
ATTGATGCGCCGTTTGTAGCATGTTGGGGCACCTTTTCAAGGGACATGGAAACGGGGAGGCGTGAGTACAACTTCCATTT
CCACGTGGGTGGCCATTGAGATGTGATCGAAGTACTCGAGGACACAGGGAGGCGTGCATGGTCGTCGGCTGATTCAGCCT
>chr2B_1
TCCACTTATCCCAACCCGCACTAATAATTGAAACTACAA-CAAGAGAATGCAAATGTTGCAACGCAACTTCACAATCGGC
ATTTATTTTAGTCATTGCAGTCGTGTCTCCTCCGTGGAGCATTACAGAACACTAGATAGATCATTTTGCAGTAACGCGTT
TACAGGGTAGTGAATTTCAGCATCACAATACACTAGTGAATACAGCTAGAAAAGTAGTGCCAAACCAGAATGATGCAACT
TTACTTTGCAGGATCAAGTATAAAATAATAACTGAACATAAAATCAGTGCGAAGATAAAGTGCTAAAATTAAATCAACAA
TATCCTCAGATCCAAAAATTGTTGAATGAAGGACGATAATTGCCCAAAATCCTTTCAATCGGGACATAAAGTAGTTGGGT
ATTTTAATAATAGAGGCACATGCTTGTCCATGCATCAATTGTACCTGTGACCAGGCCCTTGTAGACACAATCAGCATCAT
GATTGTACAGGTGGACACACTTGTCTTACTCCACCCTACATATTGAGCACCAGAACTTAATCGTGTTGGGCAATGCTTGT
AGGTGGGAATACTTAACACAGAAGACACCATGAAAAACACAGCTTCCAGTTGCCAGGTCCAGCACTTTCATGTCTGAAA-
-------CCACAAACCTTGATGCATCGATTCAGCTCAGCTCTAGTTTTCCTGCAGAATCTGCCATCGCATACAGCCA---
----TGAAGCTCCCATTATTCAGTTTGGAAGCGCTTAGAATCACGAAGGAGATGGTGAAGCATTTCCATGAGTTTGTGTC
CACAAGGCTCGGTTCCCTCTCCAAGTGTACAGCAGATCTGTTCAGACGCTCTTACTTGTTTCTGGTATTCAAAAGCAATC
CTTTGGTAGTCCAGCTTATTTACCTCATGTCAATATCTTTTGCTGGTTTCCTTGCTCTGAAGAACCTCGCACCACTGAAT
AAGCCATCTCCAAGGAACTTGGATCTGATATTCACCTCTGTGTCCACAGTGACGGTGTCAAGCATGGCAACAATTGAGAT
GGAGGACTTCTCTGGCCAGCAGCTCTGGGTTTTCATCATACTGATGATATTGGGAGGAGAAGTGTTCACTTCTATGGTAG
GGCTGCACTTCAAAAATGCTCGGGCAAACACTGAGGGTGCTCTCCAGACAAGATTGGCTTTCATAAGCAGGGACATCGAA
TCCTCTGATGATTTCAACAACAGCAGTCAGAATTATATGGAAGGCATCCAGCCAGAGGAAACCATGCCACACAACCAGGT
ACAGGAAAGCAAAGGGATGAATCATAAATCTCGCAATATTTTGGCTCATGTAGTAGCAGGCTATTTCATAGCCGCAATAG
TTTGCAGCTCTGTAGTCATTACCATCTTCCTATGGATTGACTCCGATGCAAGGCATCTACTGAAGAGTAAGCATATCAAA
ATGTGGACATTCTCAATCTTCACAGCAGTATCATCATTTGCAAACTGTGGCTTCACTCCGTTAAATGATAGCATGGCAAT
TTTCAAAAATAACCCGACTTTCCTTCTTCTAGTTACCCCACAGATTCTTGTAGGCAACACTTTGTTTGCGCCACTGTTGA
GGTTAAGCATATGGACCTTGGGAAAGCTGAGCAGCAGAGAAGAGTACGCCTACATCCTTCAGCACCCAAAGGAGATTGGA
TACAGGCATTTGCAACCTCATAAGAATTCTGTCCAATTGGTTCTGACTGGGGTGATGCTAATTTTGCTGCAAGCGATGCT
TATTTGTTATTTTGAATGGGATTCGAAATCCTTGGAGGGAATGGGATGGTTCCAGAAATTGATAGGCTCTCTGTTCCAGA
GTGCCAATTCAAGACACGCTGGTGAAACTGTCATTGACATCTCGACCCTTTCTCCACCGATTATGGTGATATTTGCACTT
GTCATGTGAGTATCCCTA---AATTTACTTAAGTTCATTAGCATACTTAGCTTAGCTCTTATTGATAGCACATATTACCT
GGAGCAATATGACTGTCTGAACCTTTATTTTTAGTTATTTTGCATGACTTTCTGAACATTGATAGTTGCACAGACTAAAT
TACGTGTGTATTTTAATAACAAAAAGCATAAATAGTTCCAATATTAAATA-TGTACCTCAATTATGGTATGGAGTGGACA
ATGGCTATTACCGAGAAAATAAGGCAAAACTAGTTATCATAGCTTGCAACATACCAATCTTACATTCTCGCAAGGGTTTG
AAAGATAATAACACATTAGCAGCTGAACACGTCTTATTCTACTAGACCAAACTAAGA-----------------------
--------------------------------------------------------------------------------
---AAATCGTTCACTC-AAACAGATGGCACACCTAGACTGAAATCAAAACTACTAGACAGATCTTAGCAAAGATAGAAAT
ATAGTTCATTTCAGAGCAACAGGTTCAGGAAAACCAAGAAGGTCAAAATGACAACCAAATTTCAACACCAGGATATAATA
TAGCCCATGGAGAAAGAAGTTTTTTCTAGAACAAGTGCCGCTGTGT---------ATCTTCCTTTTGTGGTAATAACAGA
TCATGGGCTTATTTGCAGGTACCTTCCTTCTGGTACTTCAATCCTTGCTACATGTGGTGATAACCGAAGCTTAGCGGATA
AAAAGGAAAATCCGAATGGCAGAGCAACGTGGAAGAAGTTTGCCATGACCAAGCGTACTTGTTTAGTAATAATCACGATT
TTGGCATGTATAACTGAGAGGAAGTCAATGACTGCCGATCCACTCAATTTCAGCATCTTCAGCGTAATATTCGAAGTGAT
GAGGCAAGTTGGCATCCCTATACACAATTTCATGTCCATGTTAGAAATAATAATACTCCTAGATGGCTAAAAATATGAAG
CTAGCAGCATAAGAAAAGGTTGAGCTAAAGCTTGTTGCAGACTATCATGGCTCATGAGCATCGAGCGTGTTGGTTCAAAA
ACAATATATAATGCACATTTCTCTTTTTGCAGCGCATACGGCAATGTAGGGTACTCGCTCGGCTACAGCTGTGACAAGTT
ACTGAGGCCTGATTCCGCGTGCAGAGACGCCTCGTACGGGTTCGTCGGCAGATGGAGCGACAAAGGGAGACTGATCATCA
TCCTGGTGATGTTCCTCGGAAGGTTCAAGGCGTACACCCTCAGAGGGAAGAAAACCCTGAATGTGCATCCATGTAGAAGG
ACAGCACCGCATCAGAGGCCAGAGGTGGCTGGAAATTAGGAGCCTGCATAAGATGGACCCTGAGCGTGTAGATCGGCTCG
AATGGCACCGCTTTGGGCGTGACCAAAGGAGAATGTATTATAGCAACCCTAAACGACCAGAGATGTTCATAGCGTTAGCT
GTAATGTTGTAAGATCTTCACCCTGGATA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>chr1D_3619
AACCAAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------GCTGGTTTTTTAAGAACATGAGATCAGCTTGGGATCTAGCGCAGGAGG
CGAACTTCAAGCCTCTGGAGGATAATCTATATACCATCCAATTCTCGTGCTTGGGGGATTGGGAGAGAGTTATCCATGAT
GGACCATGGCACTTTAGGGGAGATGTTGTCATCATCAAACCTTATGATGGGATCACAAAGCCGTCCACAGTTCGGCTAGA
CACCATTGAAATCTGGGCACAAATTCATGATGTACCACAGTTATACGCACATCTGGTGCCATCACTTGGAGCTAAGATTG
GAGAGGTGTTGTTCACGAAGCCACAATCACAAGACTTCAAGGGTAATTTCTATCGCGTTTGGGTGAGGATCAATGTCGCC
AAA-CCTCTCAAGAAAGCCGTATCCATGATTCGTAATGGAAAGAGGCAGATATACAAAGTTAGATACAAGAAGGTGCCGG
ATTGGTGTGCGGTTTGTGGTTTGCTTGGTCACCAATTCAAGGAGCATGGCAATGGG------------------------
--------------------------------------------------------------------------------
>SNPs
------------------------------------S--S----------------------------------------
--------S-------------------------S-----------------------------S--------S------
-------------------------------------------------------------------S---S--------
-------------------S--------------------------------------------S---------------
---------------------------------S-----------------S-----------S-------------SS-
S----------------------S----------------------------S---------S-----------------
----------------------------------------------------------S--------------------S
-----------------S--S----------------------------------------------S----------SS
SSSSSSS----------S----------------------------S---------------------S--------SSS
SSSS-----------------------------------S----S-----------------------------------
--S----------------------------------S-S----------------------------------------
---------------S------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S----------S-------------------------------------------
---------------------------------------------------S----------------S-----S-----
------------------------------------------------------------------------S-------
-----------S-S-----S-----------S--------S---S-------------------------S---------
-----------------------------------------------S--------------------------------
-------S-------------------------------------------------------------S----------
--------------------------S----------------------S------------------------------
------------------S--------------S----------------S-----------------------------
------S-----S--------------S-----------------------------------------S----------
-----S-----------------------------S--------------------------------------------
-S---------------SSSS----------------S------------S----------S---------S--------
--------------S-------------------------------------------S---S-S-SS------------
-----------------------S---------SSSSS-S-SSS-S--SSS-------S---------S--S--------
-SS--------S--------------------------------------------S-----------------------
-----------------------------S-S-------------------S---S-SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS----S--------S----S----S---------S-------------S----S-----S--S---------------
-----------------------------------------S--------------------------------------
SS---S----------------------------------------SSSSSSSSS-------------------------
---------------------------------------------S-------S--------S------S-----S----
-----------------------------------------------------------------------S----SS--
-----------------------------------------------------------------SS-------------
S----------S-----S---S-S-------S---SS-SS-S------------------------S----S--SSS---
----------------------------SSS-SSSSS-S-------------S----S--S----S---S----------
-----------------------------------S--------------S----------------S---S--------
-----S---------------------------------------------S------------------------S---
-------------------S----------------------S------------------------------------S
SS-S----S--------------------------------S------------------------------------SS
-S---------S----------S------------------------------S------S----S-------S------
-------------S--S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S----S-S--SS------S--S-S--S-------SS--S-----S-
-S--S----S----------S-S-----S--S-----S--------------------------------S--S--S-S-
--S--------S--SS----S--S-SS--S-----S-SSS-------S---S-S-----S--S------S-SS----S--
------S-----S---SSS-----------S--S--SS-S--S-----S-----S--S---SSS--S-SS--S---S-S-
-S--S--S--------SS----SS-S--S----------S---S--S----S---S--------S--S--------SS-S
---S---S-S--S--S--S--S--S-----S--SS----SSSSS-S-----S--S-----S-SS--SS----SS-S----
----S--S--S------S-SS--S-S--S----SS-------SS-----S--S---SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_765
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TGGAAGCGCTTAGAGTCACC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>reverse_2364
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TCCTAGGAGGCTGGGGTTAC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>forward_1269
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------AGTCAGAGGAAACCATGCCG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>reverse_3280
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
GGAACACCACATCAGAGGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>forward_2383
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TCCTAGGAGGCTGGGGTTAC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>reverse_3861
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------CGACGCCGTGATCATAAGGA----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
