Multiple sequence alignment - TraesCS2D01G419900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G419900 chr2D 100.000 2804 0 0 1 2804 533988650 533985847 0.000000e+00 5179
1 TraesCS2D01G419900 chr2D 76.562 320 48 16 1861 2180 534154911 534154619 1.740000e-32 150
2 TraesCS2D01G419900 chr2B 86.472 1715 174 29 839 2508 634179707 634178006 0.000000e+00 1829
3 TraesCS2D01G419900 chr2B 89.802 706 56 11 2 699 634180804 634180107 0.000000e+00 891
4 TraesCS2D01G419900 chr2B 91.026 156 13 1 2626 2780 672623705 672623550 2.830000e-50 209
5 TraesCS2D01G419900 chr2B 84.733 131 10 6 2502 2623 634177963 634177834 3.790000e-24 122
6 TraesCS2D01G419900 chr7D 95.732 164 5 2 2626 2788 614242879 614242717 2.140000e-66 263
7 TraesCS2D01G419900 chr7B 93.333 165 9 2 2614 2777 389983866 389984029 2.790000e-60 243
8 TraesCS2D01G419900 chr7B 91.195 159 7 4 2615 2772 681571442 681571290 2.830000e-50 209
9 TraesCS2D01G419900 chr3D 92.308 169 12 1 2624 2791 614662645 614662477 3.610000e-59 239
10 TraesCS2D01G419900 chr3D 92.157 153 8 3 2625 2777 12766090 12766238 2.190000e-51 213
11 TraesCS2D01G419900 chr6D 92.053 151 11 1 2623 2773 37604264 37604413 7.870000e-51 211
12 TraesCS2D01G419900 chr6D 89.143 175 10 4 2626 2796 85543863 85543694 2.830000e-50 209
13 TraesCS2D01G419900 chr6B 89.634 164 13 4 2634 2794 662801466 662801628 3.660000e-49 206


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G419900 chr2D 533985847 533988650 2803 True 5179.000000 5179 100.000000 1 2804 1 chr2D.!!$R1 2803
1 TraesCS2D01G419900 chr2B 634177834 634180804 2970 True 947.333333 1829 87.002333 2 2623 3 chr2B.!!$R2 2621

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
238 243 0.036010 GCAGCCAGTATGACAGGTGT 60.036 55.0 0.0 0.0 39.69 4.16 F
1027 1307 0.026803 GCTGAAGCATAAGCCGTTCG 59.973 55.0 0.0 0.0 43.56 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1403 1683 0.107312 CACCATGAAGAGAGGGCAGG 60.107 60.0 0.0 0.0 0.00 4.85 R
2247 2538 0.108585 GGTGCTCTTCCCTGAACACA 59.891 55.0 0.0 0.0 35.46 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.161001 GGATCAGCTGGATGGAATGTTTTT 59.839 41.667 15.13 0.00 36.00 1.94
30 31 2.997986 CAGCTGGATGGAATGTTTTTGC 59.002 45.455 5.57 0.00 0.00 3.68
31 32 2.901839 AGCTGGATGGAATGTTTTTGCT 59.098 40.909 0.00 0.00 0.00 3.91
35 36 4.804108 TGGATGGAATGTTTTTGCTAACG 58.196 39.130 0.00 0.00 0.00 3.18
88 93 1.588674 ACAGTGATTTTTGCCGACGA 58.411 45.000 0.00 0.00 0.00 4.20
89 94 1.263217 ACAGTGATTTTTGCCGACGAC 59.737 47.619 0.00 0.00 0.00 4.34
119 124 1.574702 CGACTCCGTTGGCCTTTTCC 61.575 60.000 3.32 0.00 0.00 3.13
233 238 0.036105 CACCTGCAGCCAGTATGACA 60.036 55.000 8.66 0.00 39.69 3.58
238 243 0.036010 GCAGCCAGTATGACAGGTGT 60.036 55.000 0.00 0.00 39.69 4.16
279 284 3.694058 CTGAGGATGGCGGCAGCTT 62.694 63.158 26.78 20.47 44.37 3.74
312 317 0.388294 GTATAGAAAGGACCGCCGCT 59.612 55.000 0.00 0.00 39.96 5.52
331 336 5.601662 CCGCTCAGTGAGGAAAAATATCTA 58.398 41.667 21.54 0.00 37.90 1.98
333 338 5.176590 CGCTCAGTGAGGAAAAATATCTAGC 59.823 44.000 21.54 1.93 0.00 3.42
349 354 1.967066 CTAGCTTCATCTCATCCGGGT 59.033 52.381 0.00 0.00 0.00 5.28
350 355 0.755686 AGCTTCATCTCATCCGGGTC 59.244 55.000 0.00 0.00 0.00 4.46
384 389 2.364647 GGATAAGGTTCGTGGTAGGGAG 59.635 54.545 0.00 0.00 0.00 4.30
400 405 1.545706 GGAGGAAGCAAGAGACGGGT 61.546 60.000 0.00 0.00 0.00 5.28
444 449 4.519437 TGCTCGGAGCCGCATCAG 62.519 66.667 26.00 0.00 41.51 2.90
445 450 4.212913 GCTCGGAGCCGCATCAGA 62.213 66.667 19.20 0.00 39.59 3.27
461 466 1.845205 AGAAGCCAGCCAGGTGAGT 60.845 57.895 0.00 0.00 40.61 3.41
476 481 0.456221 TGAGTTTCTCTCGGATCCGC 59.544 55.000 29.62 13.27 45.46 5.54
504 509 0.251916 TCTACCGCAGTGGGAAATGG 59.748 55.000 9.09 0.00 44.64 3.16
509 514 1.315257 CGCAGTGGGAAATGGAAGGG 61.315 60.000 0.00 0.00 0.00 3.95
515 520 4.286808 CAGTGGGAAATGGAAGGGAAAAAT 59.713 41.667 0.00 0.00 0.00 1.82
516 521 4.286808 AGTGGGAAATGGAAGGGAAAAATG 59.713 41.667 0.00 0.00 0.00 2.32
517 522 3.008923 TGGGAAATGGAAGGGAAAAATGC 59.991 43.478 0.00 0.00 0.00 3.56
518 523 3.264193 GGGAAATGGAAGGGAAAAATGCT 59.736 43.478 0.00 0.00 0.00 3.79
519 524 4.469586 GGGAAATGGAAGGGAAAAATGCTA 59.530 41.667 0.00 0.00 0.00 3.49
520 525 5.419542 GGAAATGGAAGGGAAAAATGCTAC 58.580 41.667 0.00 0.00 0.00 3.58
521 526 5.187772 GGAAATGGAAGGGAAAAATGCTACT 59.812 40.000 0.00 0.00 0.00 2.57
523 528 6.775594 AATGGAAGGGAAAAATGCTACTAC 57.224 37.500 0.00 0.00 0.00 2.73
524 529 5.249780 TGGAAGGGAAAAATGCTACTACA 57.750 39.130 0.00 0.00 0.00 2.74
545 550 7.934120 ACTACATAGAAAAGAGCTTGACAAGTT 59.066 33.333 16.39 10.73 0.00 2.66
546 551 6.963796 ACATAGAAAAGAGCTTGACAAGTTG 58.036 36.000 16.39 0.00 0.00 3.16
555 560 6.721318 AGAGCTTGACAAGTTGGGATATAAA 58.279 36.000 16.39 0.00 0.00 1.40
559 564 6.151144 GCTTGACAAGTTGGGATATAAACTGT 59.849 38.462 16.39 0.00 36.75 3.55
562 567 5.183228 ACAAGTTGGGATATAAACTGTCGG 58.817 41.667 7.96 0.00 36.75 4.79
563 568 4.417426 AGTTGGGATATAAACTGTCGGG 57.583 45.455 0.00 0.00 35.34 5.14
599 604 4.921515 GGAAAGTTTTACCTTCCAAATCGC 59.078 41.667 2.99 0.00 0.00 4.58
607 612 4.015872 ACCTTCCAAATCGCTGTAAAGA 57.984 40.909 0.00 0.00 0.00 2.52
611 616 5.584649 CCTTCCAAATCGCTGTAAAGATGTA 59.415 40.000 0.00 0.00 0.00 2.29
612 617 6.238211 CCTTCCAAATCGCTGTAAAGATGTAG 60.238 42.308 0.00 0.00 0.00 2.74
616 621 6.961554 CCAAATCGCTGTAAAGATGTAGAAAC 59.038 38.462 0.00 0.00 0.00 2.78
624 629 7.556733 TGTAAAGATGTAGAAACGTGGTTTT 57.443 32.000 0.00 0.00 35.77 2.43
626 631 9.275398 TGTAAAGATGTAGAAACGTGGTTTTAT 57.725 29.630 0.00 0.00 35.77 1.40
647 654 8.426881 TTTATACGATTCCATTCGATGTGAAA 57.573 30.769 0.31 0.00 41.62 2.69
649 656 5.818136 ACGATTCCATTCGATGTGAAATT 57.182 34.783 0.31 0.00 41.62 1.82
692 699 1.366111 CCTTGTGGGTTCGTATGGCG 61.366 60.000 0.00 0.00 43.01 5.69
695 702 1.079681 GTGGGTTCGTATGGCGTGA 60.080 57.895 0.00 0.00 42.13 4.35
699 706 1.741145 GGGTTCGTATGGCGTGAAAAT 59.259 47.619 0.00 0.00 42.13 1.82
700 707 2.162809 GGGTTCGTATGGCGTGAAAATT 59.837 45.455 0.00 0.00 42.13 1.82
701 708 3.168193 GGTTCGTATGGCGTGAAAATTG 58.832 45.455 0.00 0.00 42.13 2.32
702 709 2.535934 TCGTATGGCGTGAAAATTGC 57.464 45.000 0.00 0.00 42.13 3.56
727 759 4.156455 AGTTGCTACTGTTATGGATGGG 57.844 45.455 0.00 0.00 31.99 4.00
741 773 1.340600 GGATGGGGAATGTCACGGAAA 60.341 52.381 0.00 0.00 0.00 3.13
743 775 0.037590 TGGGGAATGTCACGGAAAGG 59.962 55.000 0.00 0.00 0.00 3.11
746 778 1.165270 GGAATGTCACGGAAAGGTGG 58.835 55.000 0.00 0.00 38.46 4.61
758 790 4.517832 ACGGAAAGGTGGTAGATTTGTTTC 59.482 41.667 0.00 0.00 0.00 2.78
763 795 7.094762 GGAAAGGTGGTAGATTTGTTTCTAGTG 60.095 40.741 0.00 0.00 0.00 2.74
772 804 6.276847 AGATTTGTTTCTAGTGGCGATCTAG 58.723 40.000 0.00 5.30 36.99 2.43
773 805 3.438297 TGTTTCTAGTGGCGATCTAGC 57.562 47.619 0.00 0.00 36.00 3.42
774 806 3.024547 TGTTTCTAGTGGCGATCTAGCT 58.975 45.455 0.00 0.00 36.00 3.32
775 807 3.447586 TGTTTCTAGTGGCGATCTAGCTT 59.552 43.478 0.00 0.00 36.00 3.74
785 1065 3.553917 GGCGATCTAGCTTCAGAAGAAAC 59.446 47.826 14.86 0.00 37.29 2.78
791 1071 3.194005 AGCTTCAGAAGAAACGGAACA 57.806 42.857 14.86 0.00 32.35 3.18
796 1076 5.748630 GCTTCAGAAGAAACGGAACAAAAAT 59.251 36.000 14.86 0.00 32.35 1.82
801 1081 7.281324 TCAGAAGAAACGGAACAAAAATGTCTA 59.719 33.333 0.00 0.00 0.00 2.59
810 1090 6.089417 CGGAACAAAAATGTCTAGAAAATGCC 59.911 38.462 0.00 0.00 0.00 4.40
815 1095 4.591321 AATGTCTAGAAAATGCCAGGGA 57.409 40.909 0.00 0.00 0.00 4.20
823 1103 0.618393 AAATGCCAGGGAATGTGGGG 60.618 55.000 0.00 0.00 35.39 4.96
825 1105 1.517538 ATGCCAGGGAATGTGGGGAA 61.518 55.000 0.00 0.00 35.39 3.97
826 1106 1.380380 GCCAGGGAATGTGGGGAAG 60.380 63.158 0.00 0.00 35.39 3.46
827 1107 1.380380 CCAGGGAATGTGGGGAAGC 60.380 63.158 0.00 0.00 0.00 3.86
828 1108 1.380380 CAGGGAATGTGGGGAAGCC 60.380 63.158 0.00 0.00 0.00 4.35
829 1109 1.856873 AGGGAATGTGGGGAAGCCA 60.857 57.895 0.00 0.00 0.00 4.75
830 1110 1.380380 GGGAATGTGGGGAAGCCAG 60.380 63.158 0.00 0.00 0.00 4.85
831 1111 2.054453 GGAATGTGGGGAAGCCAGC 61.054 63.158 0.00 0.00 0.00 4.85
832 1112 2.037847 AATGTGGGGAAGCCAGCC 59.962 61.111 0.00 0.00 0.00 4.85
833 1113 2.505364 GAATGTGGGGAAGCCAGCCT 62.505 60.000 0.00 0.00 0.00 4.58
834 1114 1.214305 AATGTGGGGAAGCCAGCCTA 61.214 55.000 0.00 0.00 0.00 3.93
835 1115 1.214305 ATGTGGGGAAGCCAGCCTAA 61.214 55.000 0.00 0.00 0.00 2.69
836 1116 1.214305 TGTGGGGAAGCCAGCCTAAT 61.214 55.000 0.00 0.00 0.00 1.73
837 1117 0.843984 GTGGGGAAGCCAGCCTAATA 59.156 55.000 0.00 0.00 0.00 0.98
851 1131 8.103935 AGCCAGCCTAATATATTTCTTAAGGTC 58.896 37.037 2.68 1.48 0.00 3.85
852 1132 7.337184 GCCAGCCTAATATATTTCTTAAGGTCC 59.663 40.741 2.68 0.00 0.00 4.46
862 1142 1.906574 TCTTAAGGTCCAAGATGCGGT 59.093 47.619 1.85 0.00 0.00 5.68
871 1151 4.024048 GGTCCAAGATGCGGTGTAATAATG 60.024 45.833 0.00 0.00 0.00 1.90
876 1156 3.561310 AGATGCGGTGTAATAATGTGCAG 59.439 43.478 0.00 0.00 33.99 4.41
878 1158 2.675844 TGCGGTGTAATAATGTGCAGTC 59.324 45.455 0.00 0.00 0.00 3.51
886 1166 8.342634 GGTGTAATAATGTGCAGTCGATATTTT 58.657 33.333 0.00 0.00 0.00 1.82
888 1168 9.929722 TGTAATAATGTGCAGTCGATATTTTTC 57.070 29.630 0.00 0.00 0.00 2.29
898 1178 6.564873 GCAGTCGATATTTTTCTACAGGATGC 60.565 42.308 0.00 0.00 42.53 3.91
902 1182 6.998074 TCGATATTTTTCTACAGGATGCCATT 59.002 34.615 0.00 0.00 42.53 3.16
907 1187 1.770658 TCTACAGGATGCCATTCCCAG 59.229 52.381 0.00 0.00 42.53 4.45
908 1188 1.770658 CTACAGGATGCCATTCCCAGA 59.229 52.381 0.00 0.00 42.53 3.86
916 1196 4.643784 GGATGCCATTCCCAGATGAATATC 59.356 45.833 0.00 0.00 33.27 1.63
917 1197 5.507637 GATGCCATTCCCAGATGAATATCT 58.492 41.667 0.00 0.00 44.45 1.98
930 1210 6.226052 AGATGAATATCTGCTATTTCGCACA 58.774 36.000 0.00 0.00 42.04 4.57
932 1212 4.212004 TGAATATCTGCTATTTCGCACAGC 59.788 41.667 0.00 0.00 35.74 4.40
940 1220 0.883833 ATTTCGCACAGCAGGAAAGG 59.116 50.000 0.00 0.00 33.63 3.11
943 1223 0.465460 TCGCACAGCAGGAAAGGTTT 60.465 50.000 0.00 0.00 0.00 3.27
946 1226 0.675633 CACAGCAGGAAAGGTTTGGG 59.324 55.000 0.00 0.00 0.00 4.12
949 1229 2.250924 CAGCAGGAAAGGTTTGGGATT 58.749 47.619 0.00 0.00 0.00 3.01
991 1271 1.205417 GTCCTGATTGCCCATTTGTGG 59.795 52.381 0.00 0.00 0.00 4.17
993 1273 1.624813 CCTGATTGCCCATTTGTGGTT 59.375 47.619 0.00 0.00 0.00 3.67
994 1274 2.038820 CCTGATTGCCCATTTGTGGTTT 59.961 45.455 0.00 0.00 0.00 3.27
996 1276 2.224475 TGATTGCCCATTTGTGGTTTGG 60.224 45.455 0.00 0.00 0.00 3.28
998 1278 1.302431 GCCCATTTGTGGTTTGGCC 60.302 57.895 0.00 0.00 32.74 5.36
1003 1283 0.607620 ATTTGTGGTTTGGCCGATGG 59.392 50.000 0.00 0.00 41.21 3.51
1015 1295 2.178890 CCGATGGCAGAGCTGAAGC 61.179 63.158 0.85 0.00 42.49 3.86
1023 1303 0.935898 CAGAGCTGAAGCATAAGCCG 59.064 55.000 4.90 0.00 45.16 5.52
1027 1307 0.026803 GCTGAAGCATAAGCCGTTCG 59.973 55.000 0.00 0.00 43.56 3.95
1038 1318 2.549282 CCGTTCGAACAAGTGCGG 59.451 61.111 26.71 17.31 0.00 5.69
1040 1320 2.127758 GTTCGAACAAGTGCGGCG 60.128 61.111 23.12 0.51 0.00 6.46
1054 1334 2.243957 CGGCGCGCCATAATGAAGA 61.244 57.895 45.26 0.00 35.37 2.87
1057 1337 1.400242 GGCGCGCCATAATGAAGATTC 60.400 52.381 43.55 12.11 35.81 2.52
1060 1340 3.186409 GCGCGCCATAATGAAGATTCTTA 59.814 43.478 23.24 0.00 0.00 2.10
1078 1358 6.689178 TTCTTAAATTGAATGAAGCAACGC 57.311 33.333 0.00 0.00 0.00 4.84
1080 1360 6.389091 TCTTAAATTGAATGAAGCAACGCAT 58.611 32.000 0.00 0.00 0.00 4.73
1083 1363 3.639716 TTGAATGAAGCAACGCATGAA 57.360 38.095 0.00 0.00 0.00 2.57
1088 1368 1.946081 TGAAGCAACGCATGAACTCAA 59.054 42.857 0.00 0.00 0.00 3.02
1095 1375 3.581024 ACGCATGAACTCAATTTGCAT 57.419 38.095 0.00 0.00 30.97 3.96
1099 1379 4.239304 GCATGAACTCAATTTGCATCACA 58.761 39.130 0.00 0.00 31.65 3.58
1102 1382 6.128391 GCATGAACTCAATTTGCATCACATTT 60.128 34.615 0.00 0.00 31.65 2.32
1118 1398 3.547746 ACATTTTGTGTGTAAGGACGGT 58.452 40.909 0.00 0.00 40.28 4.83
1122 1402 0.393820 TGTGTGTAAGGACGGTTCCC 59.606 55.000 0.00 0.00 44.10 3.97
1123 1403 0.683412 GTGTGTAAGGACGGTTCCCT 59.317 55.000 0.00 0.00 44.10 4.20
1124 1404 0.971386 TGTGTAAGGACGGTTCCCTC 59.029 55.000 0.00 0.00 44.10 4.30
1125 1405 0.108945 GTGTAAGGACGGTTCCCTCG 60.109 60.000 0.00 0.00 44.10 4.63
1126 1406 1.252904 TGTAAGGACGGTTCCCTCGG 61.253 60.000 0.00 0.00 44.10 4.63
1129 1409 4.452733 GGACGGTTCCCTCGGCTG 62.453 72.222 0.00 0.00 35.57 4.85
1134 1414 4.475135 GTTCCCTCGGCTGCTCCC 62.475 72.222 0.00 0.00 0.00 4.30
1136 1416 3.311511 TTCCCTCGGCTGCTCCCTA 62.312 63.158 0.00 0.00 0.00 3.53
1138 1418 3.541713 CCTCGGCTGCTCCCTACC 61.542 72.222 0.00 0.00 0.00 3.18
1143 1423 1.153086 GGCTGCTCCCTACCATGTG 60.153 63.158 0.00 0.00 0.00 3.21
1146 1426 0.179062 CTGCTCCCTACCATGTGCTC 60.179 60.000 0.00 0.00 0.00 4.26
1148 1428 0.462759 GCTCCCTACCATGTGCTCAC 60.463 60.000 0.00 0.00 0.00 3.51
1150 1430 0.904649 TCCCTACCATGTGCTCACTG 59.095 55.000 1.47 0.00 0.00 3.66
1152 1432 1.406069 CCCTACCATGTGCTCACTGAC 60.406 57.143 1.47 0.00 0.00 3.51
1155 1435 2.574006 ACCATGTGCTCACTGACATT 57.426 45.000 1.47 0.00 30.14 2.71
1166 1446 2.972713 TCACTGACATTATAGGGGAGGC 59.027 50.000 0.00 0.00 0.00 4.70
1167 1447 1.971357 ACTGACATTATAGGGGAGGCG 59.029 52.381 0.00 0.00 0.00 5.52
1170 1450 2.249139 GACATTATAGGGGAGGCGTCT 58.751 52.381 6.34 0.00 0.00 4.18
1175 1455 0.104934 ATAGGGGAGGCGTCTTGGAT 60.105 55.000 6.34 0.00 0.00 3.41
1177 1457 2.190578 GGGAGGCGTCTTGGATGG 59.809 66.667 6.34 0.00 0.00 3.51
1183 1463 0.532115 GGCGTCTTGGATGGCATTTT 59.468 50.000 0.00 0.00 42.56 1.82
1185 1465 1.994779 GCGTCTTGGATGGCATTTTTG 59.005 47.619 0.00 0.00 0.00 2.44
1188 1468 4.305769 CGTCTTGGATGGCATTTTTGAAA 58.694 39.130 0.00 0.00 0.00 2.69
1191 1471 5.178067 GTCTTGGATGGCATTTTTGAAAGTG 59.822 40.000 0.00 0.00 0.00 3.16
1192 1472 4.686191 TGGATGGCATTTTTGAAAGTGT 57.314 36.364 0.00 0.00 0.00 3.55
1195 1475 4.448732 GGATGGCATTTTTGAAAGTGTCAC 59.551 41.667 8.16 0.00 41.84 3.67
1196 1476 4.734398 TGGCATTTTTGAAAGTGTCACT 57.266 36.364 0.00 0.00 35.69 3.41
1199 1479 4.202151 GGCATTTTTGAAAGTGTCACTCCT 60.202 41.667 5.82 0.00 35.39 3.69
1201 1481 5.460091 GCATTTTTGAAAGTGTCACTCCTTC 59.540 40.000 5.82 8.11 35.39 3.46
1203 1483 6.582677 TTTTTGAAAGTGTCACTCCTTCAA 57.417 33.333 21.20 21.20 34.78 2.69
1209 1489 2.431057 AGTGTCACTCCTTCAAGTTCGT 59.569 45.455 0.00 0.00 0.00 3.85
1224 1504 2.609459 AGTTCGTGCTTTCAGACTGTTG 59.391 45.455 1.59 0.00 0.00 3.33
1228 1508 0.183492 TGCTTTCAGACTGTTGGCCT 59.817 50.000 3.32 0.00 0.00 5.19
1230 1510 0.595095 CTTTCAGACTGTTGGCCTGC 59.405 55.000 3.32 0.00 0.00 4.85
1235 1515 1.968540 GACTGTTGGCCTGCTGGAC 60.969 63.158 14.77 11.92 43.36 4.02
1236 1516 2.674380 CTGTTGGCCTGCTGGACC 60.674 66.667 13.75 13.72 42.00 4.46
1247 1527 1.532868 CTGCTGGACCGTCAAGAAAAG 59.467 52.381 7.15 0.00 0.00 2.27
1248 1528 0.875059 GCTGGACCGTCAAGAAAAGG 59.125 55.000 7.15 0.00 0.00 3.11
1249 1529 1.523758 CTGGACCGTCAAGAAAAGGG 58.476 55.000 0.00 0.00 0.00 3.95
1250 1530 1.071699 CTGGACCGTCAAGAAAAGGGA 59.928 52.381 0.00 0.00 0.00 4.20
1255 1535 2.224305 ACCGTCAAGAAAAGGGACTCTG 60.224 50.000 0.00 0.00 38.49 3.35
1256 1536 2.224305 CCGTCAAGAAAAGGGACTCTGT 60.224 50.000 0.00 0.00 38.49 3.41
1260 1540 3.458118 TCAAGAAAAGGGACTCTGTTCCA 59.542 43.478 1.25 0.00 39.93 3.53
1267 1547 2.042162 AGGGACTCTGTTCCAAATGCAT 59.958 45.455 0.00 0.00 37.40 3.96
1288 1568 5.388111 CATCTGACAGCAATAACACAACAG 58.612 41.667 0.00 0.00 0.00 3.16
1300 1580 2.550978 ACACAACAGTTCCAGACGAAG 58.449 47.619 0.00 0.00 0.00 3.79
1301 1581 1.867233 CACAACAGTTCCAGACGAAGG 59.133 52.381 0.00 0.00 0.00 3.46
1302 1582 1.760613 ACAACAGTTCCAGACGAAGGA 59.239 47.619 0.00 0.00 0.00 3.36
1303 1583 2.368875 ACAACAGTTCCAGACGAAGGAT 59.631 45.455 0.00 0.00 34.56 3.24
1365 1645 0.451783 GACCATGCACCATCGAAACC 59.548 55.000 0.00 0.00 0.00 3.27
1369 1649 2.019249 CATGCACCATCGAAACCTCAT 58.981 47.619 0.00 0.00 0.00 2.90
1376 1656 1.369091 ATCGAAACCTCATGGCGCAC 61.369 55.000 10.83 0.00 36.63 5.34
1385 1665 4.778143 ATGGCGCACCGAAGACCC 62.778 66.667 10.83 0.00 39.70 4.46
1389 1669 3.691342 CGCACCGAAGACCCAGGA 61.691 66.667 0.00 0.00 0.00 3.86
1403 1683 0.036294 CCAGGACGAAGGTTCTTCCC 60.036 60.000 10.77 1.20 44.29 3.97
1432 1712 4.899502 TCTCTTCATGGTGAGTTTCCTTC 58.100 43.478 13.03 0.00 0.00 3.46
1435 1715 1.974957 TCATGGTGAGTTTCCTTCGGA 59.025 47.619 0.00 0.00 0.00 4.55
1451 1731 5.092781 CCTTCGGAAAATTGTTTATCACGG 58.907 41.667 0.00 0.00 0.00 4.94
1472 1755 5.109210 CGGTTGTATCATTACTGCTCTGAA 58.891 41.667 0.00 0.00 0.00 3.02
1473 1756 5.005779 CGGTTGTATCATTACTGCTCTGAAC 59.994 44.000 0.00 0.00 0.00 3.18
1474 1757 5.005779 GGTTGTATCATTACTGCTCTGAACG 59.994 44.000 0.00 0.00 0.00 3.95
1475 1758 5.324784 TGTATCATTACTGCTCTGAACGT 57.675 39.130 0.00 0.00 0.00 3.99
1495 1778 5.791398 CGTACAATCTCTGCATTAGTACG 57.209 43.478 14.98 14.98 44.41 3.67
1545 1828 3.914984 TTCGGGAGAAGACTGCAAG 57.085 52.632 0.00 0.00 45.39 4.01
1576 1859 2.230660 GGTTGGACAAGAAGTTCCCTG 58.769 52.381 0.00 0.05 0.00 4.45
1631 1914 0.250513 GACGTTGAATCCCTCCAGCT 59.749 55.000 0.00 0.00 0.00 4.24
1697 1980 1.066858 TCAGAGCAAAAGAGCTACCGG 60.067 52.381 0.00 0.00 46.75 5.28
1777 2060 0.657368 CTGTCGCAACCGAAGCAAAC 60.657 55.000 0.00 0.00 46.34 2.93
1793 2076 1.065854 CAAACCTCCTAGAGTGGCCAG 60.066 57.143 5.11 0.00 31.89 4.85
1864 2147 5.949354 CCACCCTAGTTTCATTTGTAATGGA 59.051 40.000 0.00 0.00 0.00 3.41
1890 2173 5.537188 TCTTATGTCCATTTTGTTGCAACC 58.463 37.500 26.14 9.01 0.00 3.77
1894 2177 1.127701 CCATTTTGTTGCAACCGTCG 58.872 50.000 26.14 10.99 0.00 5.12
1895 2178 1.535015 CCATTTTGTTGCAACCGTCGT 60.535 47.619 26.14 6.46 0.00 4.34
1906 2189 0.603569 AACCGTCGTGCTCTGAGAAT 59.396 50.000 9.28 0.00 0.00 2.40
1908 2191 0.109086 CCGTCGTGCTCTGAGAATGT 60.109 55.000 9.28 0.00 0.00 2.71
1914 2197 3.947834 TCGTGCTCTGAGAATGTGATCTA 59.052 43.478 9.28 0.00 0.00 1.98
1942 2226 9.482627 GATCTAGGTAGTTTTATGATCTGTTGG 57.517 37.037 0.00 0.00 0.00 3.77
1947 2231 9.975218 AGGTAGTTTTATGATCTGTTGGTTATT 57.025 29.630 0.00 0.00 0.00 1.40
1965 2249 5.910723 GGTTATTGTTGAACAATTCGTCGTT 59.089 36.000 26.27 5.42 45.80 3.85
1974 2258 4.822036 ACAATTCGTCGTTGGATTTCAA 57.178 36.364 0.00 0.00 0.00 2.69
2039 2323 6.071616 TGTCCCCTGTTTAAATAGTTTGCATC 60.072 38.462 10.61 0.00 0.00 3.91
2043 2327 7.151308 CCCTGTTTAAATAGTTTGCATCAACA 58.849 34.615 10.61 0.00 0.00 3.33
2044 2328 7.818930 CCCTGTTTAAATAGTTTGCATCAACAT 59.181 33.333 10.61 0.00 0.00 2.71
2045 2329 9.853555 CCTGTTTAAATAGTTTGCATCAACATA 57.146 29.630 10.61 0.00 0.00 2.29
2065 2349 8.404765 CAACATATTATCTTGCCACAACATACA 58.595 33.333 0.00 0.00 0.00 2.29
2071 2355 3.505680 TCTTGCCACAACATACATTGGTC 59.494 43.478 0.00 0.00 33.63 4.02
2079 2363 4.464951 ACAACATACATTGGTCCGACTCTA 59.535 41.667 0.00 0.00 33.63 2.43
2095 2379 4.976731 CGACTCTAATGTCTAATCCAACCG 59.023 45.833 0.00 0.00 35.00 4.44
2126 2410 0.250234 TGAATCCTTCCAGACTGGCG 59.750 55.000 17.33 9.86 37.47 5.69
2138 2422 2.354510 CAGACTGGCGAAAAAGTGTTGA 59.645 45.455 0.00 0.00 0.00 3.18
2188 2473 5.464168 GCATGAGTGTGCAGTAAGAAAATT 58.536 37.500 0.00 0.00 44.43 1.82
2247 2538 2.555325 TCACGGTGTTGTTCTCTACGAT 59.445 45.455 8.17 0.00 0.00 3.73
2258 2549 3.081710 TCTCTACGATGTGTTCAGGGA 57.918 47.619 0.00 0.00 0.00 4.20
2261 2552 3.427573 TCTACGATGTGTTCAGGGAAGA 58.572 45.455 0.00 0.00 0.00 2.87
2307 2623 9.584008 AGAGATTGTATCTACGGTAAGGATTAA 57.416 33.333 0.00 0.00 40.38 1.40
2316 2632 7.293073 TCTACGGTAAGGATTAATACCAGTCT 58.707 38.462 6.06 0.00 41.37 3.24
2317 2633 8.439971 TCTACGGTAAGGATTAATACCAGTCTA 58.560 37.037 6.06 0.00 41.37 2.59
2318 2634 7.521871 ACGGTAAGGATTAATACCAGTCTAG 57.478 40.000 6.06 0.00 41.37 2.43
2319 2635 6.492772 ACGGTAAGGATTAATACCAGTCTAGG 59.507 42.308 6.06 0.00 41.37 3.02
2320 2636 6.492772 CGGTAAGGATTAATACCAGTCTAGGT 59.507 42.308 6.06 0.00 41.37 3.08
2321 2637 7.309073 CGGTAAGGATTAATACCAGTCTAGGTC 60.309 44.444 6.06 0.00 41.37 3.85
2322 2638 7.729431 GGTAAGGATTAATACCAGTCTAGGTCT 59.271 40.741 0.00 0.00 41.05 3.85
2323 2639 7.842887 AAGGATTAATACCAGTCTAGGTCTC 57.157 40.000 0.00 0.00 42.06 3.36
2324 2640 7.169287 AGGATTAATACCAGTCTAGGTCTCT 57.831 40.000 0.00 0.00 42.06 3.10
2360 2676 2.042162 AGTCCCTAGGAAACCACTACGA 59.958 50.000 11.48 0.00 31.38 3.43
2361 2677 2.165234 GTCCCTAGGAAACCACTACGAC 59.835 54.545 11.48 0.77 31.38 4.34
2362 2678 2.042162 TCCCTAGGAAACCACTACGACT 59.958 50.000 11.48 0.00 0.00 4.18
2363 2679 2.165845 CCCTAGGAAACCACTACGACTG 59.834 54.545 11.48 0.00 0.00 3.51
2364 2680 3.087031 CCTAGGAAACCACTACGACTGA 58.913 50.000 1.05 0.00 0.00 3.41
2365 2681 3.700038 CCTAGGAAACCACTACGACTGAT 59.300 47.826 1.05 0.00 0.00 2.90
2366 2682 4.159879 CCTAGGAAACCACTACGACTGATT 59.840 45.833 1.05 0.00 0.00 2.57
2367 2683 3.926616 AGGAAACCACTACGACTGATTG 58.073 45.455 0.00 0.00 0.00 2.67
2371 2697 2.526432 ACCACTACGACTGATTGGACT 58.474 47.619 0.00 0.00 0.00 3.85
2376 2702 2.631418 ACGACTGATTGGACTACACG 57.369 50.000 0.00 0.00 0.00 4.49
2377 2703 1.269166 CGACTGATTGGACTACACGC 58.731 55.000 0.00 0.00 0.00 5.34
2382 2708 4.072131 ACTGATTGGACTACACGCAAAAT 58.928 39.130 0.00 0.00 0.00 1.82
2388 2714 3.071479 GGACTACACGCAAAATCTCCAA 58.929 45.455 0.00 0.00 0.00 3.53
2395 2721 5.540911 ACACGCAAAATCTCCAAATGAAAT 58.459 33.333 0.00 0.00 0.00 2.17
2443 2772 2.094659 CCGTAGGCTTGTGACGCTG 61.095 63.158 0.00 0.00 46.14 5.18
2454 2783 1.153765 TGACGCTGGAGCAGAATCG 60.154 57.895 0.00 0.00 42.21 3.34
2456 2785 3.624300 CGCTGGAGCAGAATCGCG 61.624 66.667 0.00 0.00 42.21 5.87
2466 2795 2.279784 GAATCGCGGAGAGGCTGG 60.280 66.667 6.13 0.00 0.00 4.85
2482 2811 3.851128 GGCGGGACAGGTCTAGCC 61.851 72.222 17.65 17.65 41.65 3.93
2493 2822 0.460459 GGTCTAGCCGTTGAGGAAGC 60.460 60.000 0.00 0.00 45.00 3.86
2501 2830 1.372997 GTTGAGGAAGCGCTCGTCA 60.373 57.895 12.06 17.93 45.05 4.35
2503 2832 1.806461 TTGAGGAAGCGCTCGTCAGT 61.806 55.000 12.06 0.00 46.66 3.41
2508 2837 1.469251 GGAAGCGCTCGTCAGTGAATA 60.469 52.381 12.06 0.00 30.94 1.75
2509 2838 1.584308 GAAGCGCTCGTCAGTGAATAC 59.416 52.381 12.06 0.00 30.94 1.89
2510 2839 0.526211 AGCGCTCGTCAGTGAATACA 59.474 50.000 2.64 0.00 30.94 2.29
2511 2840 0.917259 GCGCTCGTCAGTGAATACAG 59.083 55.000 0.00 0.00 30.94 2.74
2512 2841 0.917259 CGCTCGTCAGTGAATACAGC 59.083 55.000 0.00 0.00 30.94 4.40
2513 2842 1.732405 CGCTCGTCAGTGAATACAGCA 60.732 52.381 0.00 0.00 30.94 4.41
2514 2843 2.337583 GCTCGTCAGTGAATACAGCAA 58.662 47.619 0.00 0.00 0.00 3.91
2515 2844 2.092838 GCTCGTCAGTGAATACAGCAAC 59.907 50.000 0.00 0.00 0.00 4.17
2516 2845 3.317150 CTCGTCAGTGAATACAGCAACA 58.683 45.455 0.00 0.00 0.00 3.33
2517 2846 3.925379 TCGTCAGTGAATACAGCAACAT 58.075 40.909 0.00 0.00 0.00 2.71
2518 2847 3.926527 TCGTCAGTGAATACAGCAACATC 59.073 43.478 0.00 0.00 0.00 3.06
2519 2848 3.062639 CGTCAGTGAATACAGCAACATCC 59.937 47.826 0.00 0.00 0.00 3.51
2520 2849 4.002982 GTCAGTGAATACAGCAACATCCA 58.997 43.478 0.00 0.00 0.00 3.41
2521 2850 4.455533 GTCAGTGAATACAGCAACATCCAA 59.544 41.667 0.00 0.00 0.00 3.53
2523 2852 4.216042 CAGTGAATACAGCAACATCCAACA 59.784 41.667 0.00 0.00 0.00 3.33
2524 2853 4.826733 AGTGAATACAGCAACATCCAACAA 59.173 37.500 0.00 0.00 0.00 2.83
2526 2855 4.826733 TGAATACAGCAACATCCAACAACT 59.173 37.500 0.00 0.00 0.00 3.16
2527 2856 6.000840 TGAATACAGCAACATCCAACAACTA 58.999 36.000 0.00 0.00 0.00 2.24
2528 2857 6.149308 TGAATACAGCAACATCCAACAACTAG 59.851 38.462 0.00 0.00 0.00 2.57
2533 2913 3.191371 GCAACATCCAACAACTAGAAGGG 59.809 47.826 0.00 0.00 0.00 3.95
2569 2949 7.811236 AGTGCATGTTTGTTTCTTGAATATCAG 59.189 33.333 0.00 0.00 0.00 2.90
2574 2954 5.963176 TTGTTTCTTGAATATCAGCAGCA 57.037 34.783 0.00 0.00 0.00 4.41
2576 2956 5.702865 TGTTTCTTGAATATCAGCAGCAAC 58.297 37.500 0.00 0.00 0.00 4.17
2580 2962 7.812690 TTCTTGAATATCAGCAGCAACATAT 57.187 32.000 0.00 0.00 0.00 1.78
2591 2973 6.146673 TCAGCAGCAACATATATTCATCTTCG 59.853 38.462 0.00 0.00 0.00 3.79
2592 2974 5.994054 AGCAGCAACATATATTCATCTTCGT 59.006 36.000 0.00 0.00 0.00 3.85
2598 2980 9.929722 GCAACATATATTCATCTTCGTTAACAA 57.070 29.630 6.39 0.00 0.00 2.83
2628 3013 5.741388 TTGCAAACAAAAACACAAACACT 57.259 30.435 0.00 0.00 31.21 3.55
2629 3014 5.741388 TGCAAACAAAAACACAAACACTT 57.259 30.435 0.00 0.00 0.00 3.16
2630 3015 5.742446 TGCAAACAAAAACACAAACACTTC 58.258 33.333 0.00 0.00 0.00 3.01
2631 3016 5.525378 TGCAAACAAAAACACAAACACTTCT 59.475 32.000 0.00 0.00 0.00 2.85
2632 3017 6.037610 TGCAAACAAAAACACAAACACTTCTT 59.962 30.769 0.00 0.00 0.00 2.52
2633 3018 6.573357 GCAAACAAAAACACAAACACTTCTTC 59.427 34.615 0.00 0.00 0.00 2.87
2634 3019 7.518211 GCAAACAAAAACACAAACACTTCTTCT 60.518 33.333 0.00 0.00 0.00 2.85
2635 3020 8.334632 CAAACAAAAACACAAACACTTCTTCTT 58.665 29.630 0.00 0.00 0.00 2.52
2636 3021 7.637709 ACAAAAACACAAACACTTCTTCTTC 57.362 32.000 0.00 0.00 0.00 2.87
2637 3022 6.362283 ACAAAAACACAAACACTTCTTCTTCG 59.638 34.615 0.00 0.00 0.00 3.79
2638 3023 4.616181 AACACAAACACTTCTTCTTCGG 57.384 40.909 0.00 0.00 0.00 4.30
2639 3024 3.606687 ACACAAACACTTCTTCTTCGGT 58.393 40.909 0.00 0.00 0.00 4.69
2640 3025 4.761975 ACACAAACACTTCTTCTTCGGTA 58.238 39.130 0.00 0.00 0.00 4.02
2641 3026 4.569564 ACACAAACACTTCTTCTTCGGTAC 59.430 41.667 0.00 0.00 0.00 3.34
2642 3027 4.569162 CACAAACACTTCTTCTTCGGTACA 59.431 41.667 0.00 0.00 0.00 2.90
2643 3028 5.064198 CACAAACACTTCTTCTTCGGTACAA 59.936 40.000 0.00 0.00 0.00 2.41
2644 3029 5.064325 ACAAACACTTCTTCTTCGGTACAAC 59.936 40.000 0.00 0.00 0.00 3.32
2645 3030 3.725490 ACACTTCTTCTTCGGTACAACC 58.275 45.455 0.00 0.00 34.05 3.77
2646 3031 3.064931 CACTTCTTCTTCGGTACAACCC 58.935 50.000 0.00 0.00 33.75 4.11
2647 3032 2.970640 ACTTCTTCTTCGGTACAACCCT 59.029 45.455 0.00 0.00 33.75 4.34
2648 3033 3.006644 ACTTCTTCTTCGGTACAACCCTC 59.993 47.826 0.00 0.00 33.75 4.30
2649 3034 2.885616 TCTTCTTCGGTACAACCCTCT 58.114 47.619 0.00 0.00 33.75 3.69
2650 3035 4.038271 TCTTCTTCGGTACAACCCTCTA 57.962 45.455 0.00 0.00 33.75 2.43
2651 3036 4.410099 TCTTCTTCGGTACAACCCTCTAA 58.590 43.478 0.00 0.00 33.75 2.10
2652 3037 4.834496 TCTTCTTCGGTACAACCCTCTAAA 59.166 41.667 0.00 0.00 33.75 1.85
2653 3038 5.482878 TCTTCTTCGGTACAACCCTCTAAAT 59.517 40.000 0.00 0.00 33.75 1.40
2654 3039 6.664816 TCTTCTTCGGTACAACCCTCTAAATA 59.335 38.462 0.00 0.00 33.75 1.40
2655 3040 6.212888 TCTTCGGTACAACCCTCTAAATAC 57.787 41.667 0.00 0.00 33.75 1.89
2656 3041 5.716228 TCTTCGGTACAACCCTCTAAATACA 59.284 40.000 0.00 0.00 33.75 2.29
2657 3042 5.999205 TCGGTACAACCCTCTAAATACAA 57.001 39.130 0.00 0.00 33.75 2.41
2658 3043 5.723295 TCGGTACAACCCTCTAAATACAAC 58.277 41.667 0.00 0.00 33.75 3.32
2659 3044 5.245751 TCGGTACAACCCTCTAAATACAACA 59.754 40.000 0.00 0.00 33.75 3.33
2660 3045 5.933463 CGGTACAACCCTCTAAATACAACAA 59.067 40.000 0.00 0.00 33.75 2.83
2661 3046 6.128472 CGGTACAACCCTCTAAATACAACAAC 60.128 42.308 0.00 0.00 33.75 3.32
2662 3047 5.934935 ACAACCCTCTAAATACAACAACG 57.065 39.130 0.00 0.00 0.00 4.10
2663 3048 4.758165 ACAACCCTCTAAATACAACAACGG 59.242 41.667 0.00 0.00 0.00 4.44
2664 3049 3.340928 ACCCTCTAAATACAACAACGGC 58.659 45.455 0.00 0.00 0.00 5.68
2665 3050 3.008704 ACCCTCTAAATACAACAACGGCT 59.991 43.478 0.00 0.00 0.00 5.52
2666 3051 3.374058 CCCTCTAAATACAACAACGGCTG 59.626 47.826 0.00 0.00 0.00 4.85
2667 3052 4.250464 CCTCTAAATACAACAACGGCTGA 58.750 43.478 0.00 0.00 0.00 4.26
2668 3053 4.330074 CCTCTAAATACAACAACGGCTGAG 59.670 45.833 0.00 0.00 0.00 3.35
2669 3054 5.142061 TCTAAATACAACAACGGCTGAGA 57.858 39.130 0.00 0.00 0.00 3.27
2670 3055 5.730550 TCTAAATACAACAACGGCTGAGAT 58.269 37.500 0.00 0.00 0.00 2.75
2671 3056 4.946784 AAATACAACAACGGCTGAGATC 57.053 40.909 0.00 0.00 0.00 2.75
2672 3057 1.990799 TACAACAACGGCTGAGATCG 58.009 50.000 0.00 0.00 0.00 3.69
2673 3058 1.291877 ACAACAACGGCTGAGATCGC 61.292 55.000 0.00 0.00 0.00 4.58
2674 3059 1.016130 CAACAACGGCTGAGATCGCT 61.016 55.000 0.00 0.00 0.00 4.93
2675 3060 0.737715 AACAACGGCTGAGATCGCTC 60.738 55.000 0.00 0.00 41.67 5.03
2676 3061 1.880340 CAACGGCTGAGATCGCTCC 60.880 63.158 0.00 0.00 40.55 4.70
2677 3062 3.417275 AACGGCTGAGATCGCTCCG 62.417 63.158 21.65 21.65 40.55 4.63
2678 3063 3.893763 CGGCTGAGATCGCTCCGT 61.894 66.667 17.48 0.00 40.55 4.69
2679 3064 2.543802 CGGCTGAGATCGCTCCGTA 61.544 63.158 17.48 0.00 40.55 4.02
2680 3065 1.008309 GGCTGAGATCGCTCCGTAC 60.008 63.158 0.00 0.00 40.55 3.67
2681 3066 1.008309 GCTGAGATCGCTCCGTACC 60.008 63.158 0.00 0.00 40.55 3.34
2682 3067 1.655329 CTGAGATCGCTCCGTACCC 59.345 63.158 0.00 0.00 40.55 3.69
2683 3068 1.797211 CTGAGATCGCTCCGTACCCC 61.797 65.000 0.00 0.00 40.55 4.95
2684 3069 1.528776 GAGATCGCTCCGTACCCCT 60.529 63.158 0.00 0.00 35.01 4.79
2685 3070 1.076192 AGATCGCTCCGTACCCCTT 60.076 57.895 0.00 0.00 0.00 3.95
2686 3071 1.108132 AGATCGCTCCGTACCCCTTC 61.108 60.000 0.00 0.00 0.00 3.46
2687 3072 1.380785 ATCGCTCCGTACCCCTTCA 60.381 57.895 0.00 0.00 0.00 3.02
2688 3073 0.759436 ATCGCTCCGTACCCCTTCAT 60.759 55.000 0.00 0.00 0.00 2.57
2689 3074 0.974010 TCGCTCCGTACCCCTTCATT 60.974 55.000 0.00 0.00 0.00 2.57
2690 3075 0.748450 CGCTCCGTACCCCTTCATTA 59.252 55.000 0.00 0.00 0.00 1.90
2691 3076 1.137479 CGCTCCGTACCCCTTCATTAA 59.863 52.381 0.00 0.00 0.00 1.40
2692 3077 2.419021 CGCTCCGTACCCCTTCATTAAA 60.419 50.000 0.00 0.00 0.00 1.52
2693 3078 3.613030 GCTCCGTACCCCTTCATTAAAA 58.387 45.455 0.00 0.00 0.00 1.52
2694 3079 4.011698 GCTCCGTACCCCTTCATTAAAAA 58.988 43.478 0.00 0.00 0.00 1.94
2695 3080 4.095932 GCTCCGTACCCCTTCATTAAAAAG 59.904 45.833 0.00 0.00 0.00 2.27
2696 3081 4.591929 TCCGTACCCCTTCATTAAAAAGG 58.408 43.478 11.36 11.36 42.52 3.11
2697 3082 4.289148 TCCGTACCCCTTCATTAAAAAGGA 59.711 41.667 17.43 0.50 45.15 3.36
2698 3083 5.044698 TCCGTACCCCTTCATTAAAAAGGAT 60.045 40.000 17.43 10.07 45.15 3.24
2699 3084 6.158344 TCCGTACCCCTTCATTAAAAAGGATA 59.842 38.462 17.43 9.34 45.15 2.59
2700 3085 6.485648 CCGTACCCCTTCATTAAAAAGGATAG 59.514 42.308 17.43 10.36 45.15 2.08
2701 3086 6.485648 CGTACCCCTTCATTAAAAAGGATAGG 59.514 42.308 17.43 13.39 45.15 2.57
2702 3087 6.668133 ACCCCTTCATTAAAAAGGATAGGA 57.332 37.500 17.43 0.00 45.15 2.94
2703 3088 7.239080 ACCCCTTCATTAAAAAGGATAGGAT 57.761 36.000 17.43 3.87 45.15 3.24
2704 3089 7.298374 ACCCCTTCATTAAAAAGGATAGGATC 58.702 38.462 17.43 0.00 45.15 3.36
2705 3090 6.431234 CCCCTTCATTAAAAAGGATAGGATCG 59.569 42.308 17.43 3.09 45.15 3.69
2706 3091 6.998673 CCCTTCATTAAAAAGGATAGGATCGT 59.001 38.462 17.43 0.00 45.15 3.73
2707 3092 7.173390 CCCTTCATTAAAAAGGATAGGATCGTC 59.827 40.741 17.43 0.00 45.15 4.20
2708 3093 7.173390 CCTTCATTAAAAAGGATAGGATCGTCC 59.827 40.741 12.53 0.00 45.15 4.79
2709 3094 6.531021 TCATTAAAAAGGATAGGATCGTCCC 58.469 40.000 6.76 3.46 37.19 4.46
2710 3095 5.961398 TTAAAAAGGATAGGATCGTCCCA 57.039 39.130 6.76 0.00 37.19 4.37
2711 3096 6.509523 TTAAAAAGGATAGGATCGTCCCAT 57.490 37.500 6.76 0.00 37.19 4.00
2712 3097 4.625607 AAAAGGATAGGATCGTCCCATC 57.374 45.455 6.76 4.65 37.19 3.51
2713 3098 3.260269 AAGGATAGGATCGTCCCATCA 57.740 47.619 12.01 0.00 37.19 3.07
2714 3099 2.530701 AGGATAGGATCGTCCCATCAC 58.469 52.381 12.01 4.84 37.19 3.06
2715 3100 2.158310 AGGATAGGATCGTCCCATCACA 60.158 50.000 12.01 0.00 37.19 3.58
2716 3101 2.834549 GGATAGGATCGTCCCATCACAT 59.165 50.000 12.01 0.00 37.19 3.21
2717 3102 4.023980 GGATAGGATCGTCCCATCACATA 58.976 47.826 12.01 0.00 37.19 2.29
2718 3103 4.466370 GGATAGGATCGTCCCATCACATAA 59.534 45.833 12.01 0.00 37.19 1.90
2719 3104 5.046591 GGATAGGATCGTCCCATCACATAAA 60.047 44.000 12.01 0.00 37.19 1.40
2720 3105 4.771114 AGGATCGTCCCATCACATAAAA 57.229 40.909 1.06 0.00 37.19 1.52
2721 3106 5.110814 AGGATCGTCCCATCACATAAAAA 57.889 39.130 1.06 0.00 37.19 1.94
2722 3107 5.126067 AGGATCGTCCCATCACATAAAAAG 58.874 41.667 1.06 0.00 37.19 2.27
2723 3108 4.261197 GGATCGTCCCATCACATAAAAAGC 60.261 45.833 0.00 0.00 0.00 3.51
2724 3109 3.013921 TCGTCCCATCACATAAAAAGCC 58.986 45.455 0.00 0.00 0.00 4.35
2725 3110 2.099098 CGTCCCATCACATAAAAAGCCC 59.901 50.000 0.00 0.00 0.00 5.19
2726 3111 2.430694 GTCCCATCACATAAAAAGCCCC 59.569 50.000 0.00 0.00 0.00 5.80
2727 3112 1.762370 CCCATCACATAAAAAGCCCCC 59.238 52.381 0.00 0.00 0.00 5.40
2728 3113 1.408702 CCATCACATAAAAAGCCCCCG 59.591 52.381 0.00 0.00 0.00 5.73
2729 3114 1.111277 ATCACATAAAAAGCCCCCGC 58.889 50.000 0.00 0.00 0.00 6.13
2730 3115 0.968393 TCACATAAAAAGCCCCCGCC 60.968 55.000 0.00 0.00 34.57 6.13
2731 3116 1.684391 ACATAAAAAGCCCCCGCCC 60.684 57.895 0.00 0.00 34.57 6.13
2732 3117 2.441348 ATAAAAAGCCCCCGCCCG 60.441 61.111 0.00 0.00 34.57 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.860802 TTCCATCCAGCTGATCCTTTTA 57.139 40.909 17.39 0.00 0.00 1.52
4 5 2.133520 ACATTCCATCCAGCTGATCCT 58.866 47.619 17.39 0.00 0.00 3.24
6 7 4.996788 AAAACATTCCATCCAGCTGATC 57.003 40.909 17.39 0.00 0.00 2.92
7 8 4.622220 GCAAAAACATTCCATCCAGCTGAT 60.622 41.667 17.39 3.92 0.00 2.90
8 9 3.306225 GCAAAAACATTCCATCCAGCTGA 60.306 43.478 17.39 1.21 0.00 4.26
16 17 7.546778 AAAAACGTTAGCAAAAACATTCCAT 57.453 28.000 0.00 0.00 0.00 3.41
44 45 7.959658 TCTGATCCATGAACCAAACAATATT 57.040 32.000 0.00 0.00 0.00 1.28
54 59 3.942829 TCACTGTTCTGATCCATGAACC 58.057 45.455 15.79 4.55 41.10 3.62
63 68 3.820467 TCGGCAAAAATCACTGTTCTGAT 59.180 39.130 0.00 0.00 31.84 2.90
88 93 2.355481 GAGTCGTTTGCCGTCCGT 60.355 61.111 0.00 0.00 37.94 4.69
89 94 3.110178 GGAGTCGTTTGCCGTCCG 61.110 66.667 0.00 0.00 37.94 4.79
100 105 1.574702 GGAAAAGGCCAACGGAGTCG 61.575 60.000 5.01 0.00 45.00 4.18
261 266 3.694058 AAGCTGCCGCCATCCTCAG 62.694 63.158 0.00 0.00 36.60 3.35
312 317 7.851228 TGAAGCTAGATATTTTTCCTCACTGA 58.149 34.615 0.00 0.00 0.00 3.41
331 336 0.755686 GACCCGGATGAGATGAAGCT 59.244 55.000 0.73 0.00 0.00 3.74
333 338 2.988010 TTGACCCGGATGAGATGAAG 57.012 50.000 0.73 0.00 0.00 3.02
349 354 5.505181 ACCTTATCCAGCTTCTCTTTTGA 57.495 39.130 0.00 0.00 0.00 2.69
350 355 5.163814 CGAACCTTATCCAGCTTCTCTTTTG 60.164 44.000 0.00 0.00 0.00 2.44
374 379 1.208293 CTCTTGCTTCCTCCCTACCAC 59.792 57.143 0.00 0.00 0.00 4.16
384 389 0.321996 AGAACCCGTCTCTTGCTTCC 59.678 55.000 0.00 0.00 0.00 3.46
438 443 2.119655 CCTGGCTGGCTTCTGATGC 61.120 63.158 6.97 6.97 0.00 3.91
444 449 0.538287 AAACTCACCTGGCTGGCTTC 60.538 55.000 10.71 0.00 40.22 3.86
445 450 0.538287 GAAACTCACCTGGCTGGCTT 60.538 55.000 10.71 0.00 40.22 4.35
461 466 1.141881 GCAGCGGATCCGAGAGAAA 59.858 57.895 37.64 0.00 42.83 2.52
504 509 8.732746 TTCTATGTAGTAGCATTTTTCCCTTC 57.267 34.615 0.00 0.00 0.00 3.46
509 514 9.709600 GCTCTTTTCTATGTAGTAGCATTTTTC 57.290 33.333 0.00 0.00 0.00 2.29
515 520 7.036220 GTCAAGCTCTTTTCTATGTAGTAGCA 58.964 38.462 0.00 0.00 0.00 3.49
516 521 7.036220 TGTCAAGCTCTTTTCTATGTAGTAGC 58.964 38.462 0.00 0.00 0.00 3.58
517 522 8.988064 TTGTCAAGCTCTTTTCTATGTAGTAG 57.012 34.615 0.00 0.00 0.00 2.57
518 523 8.585881 ACTTGTCAAGCTCTTTTCTATGTAGTA 58.414 33.333 12.66 0.00 0.00 1.82
519 524 7.445945 ACTTGTCAAGCTCTTTTCTATGTAGT 58.554 34.615 12.66 0.00 0.00 2.73
520 525 7.897575 ACTTGTCAAGCTCTTTTCTATGTAG 57.102 36.000 12.66 0.00 0.00 2.74
521 526 7.173218 CCAACTTGTCAAGCTCTTTTCTATGTA 59.827 37.037 12.66 0.00 0.00 2.29
523 528 6.376978 CCAACTTGTCAAGCTCTTTTCTATG 58.623 40.000 12.66 0.00 0.00 2.23
524 529 5.474876 CCCAACTTGTCAAGCTCTTTTCTAT 59.525 40.000 12.66 0.00 0.00 1.98
545 550 2.104111 CTGCCCGACAGTTTATATCCCA 59.896 50.000 0.00 0.00 41.86 4.37
546 551 2.767505 CTGCCCGACAGTTTATATCCC 58.232 52.381 0.00 0.00 41.86 3.85
559 564 3.214253 CAGATCTGCTCTGCCCGA 58.786 61.111 10.38 0.00 44.73 5.14
578 583 5.068591 ACAGCGATTTGGAAGGTAAAACTTT 59.931 36.000 0.00 0.00 0.00 2.66
579 584 4.583073 ACAGCGATTTGGAAGGTAAAACTT 59.417 37.500 0.00 0.00 0.00 2.66
580 585 4.142038 ACAGCGATTTGGAAGGTAAAACT 58.858 39.130 0.00 0.00 0.00 2.66
581 586 4.499037 ACAGCGATTTGGAAGGTAAAAC 57.501 40.909 0.00 0.00 0.00 2.43
582 587 6.487331 TCTTTACAGCGATTTGGAAGGTAAAA 59.513 34.615 0.00 0.00 31.34 1.52
583 588 5.998981 TCTTTACAGCGATTTGGAAGGTAAA 59.001 36.000 0.00 0.00 0.00 2.01
584 589 5.553123 TCTTTACAGCGATTTGGAAGGTAA 58.447 37.500 0.00 0.00 0.00 2.85
585 590 5.155278 TCTTTACAGCGATTTGGAAGGTA 57.845 39.130 0.00 0.00 0.00 3.08
586 591 4.015872 TCTTTACAGCGATTTGGAAGGT 57.984 40.909 0.00 0.00 0.00 3.50
587 592 4.396166 ACATCTTTACAGCGATTTGGAAGG 59.604 41.667 0.00 0.00 0.00 3.46
599 604 6.780706 AACCACGTTTCTACATCTTTACAG 57.219 37.500 0.00 0.00 0.00 2.74
607 612 8.483307 AATCGTATAAAACCACGTTTCTACAT 57.517 30.769 0.00 0.00 39.18 2.29
611 616 5.933463 TGGAATCGTATAAAACCACGTTTCT 59.067 36.000 14.06 0.00 42.36 2.52
612 617 6.168164 TGGAATCGTATAAAACCACGTTTC 57.832 37.500 8.61 8.61 42.16 2.78
616 621 5.232626 TCGAATGGAATCGTATAAAACCACG 59.767 40.000 0.00 0.00 43.19 4.94
624 629 8.495148 CAATTTCACATCGAATGGAATCGTATA 58.505 33.333 6.95 0.00 43.19 1.47
626 631 6.315144 ACAATTTCACATCGAATGGAATCGTA 59.685 34.615 6.95 0.00 43.19 3.43
685 692 3.485947 TCTGCAATTTTCACGCCATAC 57.514 42.857 0.00 0.00 0.00 2.39
690 697 3.758521 CAACTTCTGCAATTTTCACGC 57.241 42.857 0.00 0.00 0.00 5.34
702 709 5.295292 CCATCCATAACAGTAGCAACTTCTG 59.705 44.000 0.31 0.31 35.49 3.02
718 750 1.419762 CCGTGACATTCCCCATCCATA 59.580 52.381 0.00 0.00 0.00 2.74
727 759 1.165270 CCACCTTTCCGTGACATTCC 58.835 55.000 0.00 0.00 35.68 3.01
741 773 5.803470 GCCACTAGAAACAAATCTACCACCT 60.803 44.000 0.00 0.00 0.00 4.00
743 775 4.092968 CGCCACTAGAAACAAATCTACCAC 59.907 45.833 0.00 0.00 0.00 4.16
746 778 6.043411 AGATCGCCACTAGAAACAAATCTAC 58.957 40.000 0.00 0.00 0.00 2.59
758 790 2.881513 TCTGAAGCTAGATCGCCACTAG 59.118 50.000 0.00 0.00 39.92 2.57
763 795 3.444703 TTCTTCTGAAGCTAGATCGCC 57.555 47.619 12.54 0.00 0.00 5.54
772 804 3.963383 TTGTTCCGTTTCTTCTGAAGC 57.037 42.857 12.54 0.00 33.28 3.86
773 805 6.751888 ACATTTTTGTTCCGTTTCTTCTGAAG 59.248 34.615 11.18 11.18 33.28 3.02
774 806 6.626302 ACATTTTTGTTCCGTTTCTTCTGAA 58.374 32.000 0.00 0.00 0.00 3.02
775 807 6.094881 AGACATTTTTGTTCCGTTTCTTCTGA 59.905 34.615 0.00 0.00 0.00 3.27
785 1065 6.089417 GGCATTTTCTAGACATTTTTGTTCCG 59.911 38.462 0.00 0.00 0.00 4.30
791 1071 5.779771 TCCCTGGCATTTTCTAGACATTTTT 59.220 36.000 0.00 0.00 0.00 1.94
796 1076 4.263905 ACATTCCCTGGCATTTTCTAGACA 60.264 41.667 0.00 0.00 0.00 3.41
801 1081 2.181975 CCACATTCCCTGGCATTTTCT 58.818 47.619 0.00 0.00 0.00 2.52
810 1090 1.380380 GGCTTCCCCACATTCCCTG 60.380 63.158 0.00 0.00 0.00 4.45
815 1095 1.214305 TAGGCTGGCTTCCCCACATT 61.214 55.000 9.68 0.00 39.18 2.71
823 1103 8.951243 CCTTAAGAAATATATTAGGCTGGCTTC 58.049 37.037 9.68 0.00 0.00 3.86
825 1105 7.990055 ACCTTAAGAAATATATTAGGCTGGCT 58.010 34.615 9.28 9.28 0.00 4.75
826 1106 7.337184 GGACCTTAAGAAATATATTAGGCTGGC 59.663 40.741 3.36 0.00 0.00 4.85
827 1107 8.383175 TGGACCTTAAGAAATATATTAGGCTGG 58.617 37.037 3.36 6.50 0.00 4.85
828 1108 9.793259 TTGGACCTTAAGAAATATATTAGGCTG 57.207 33.333 3.36 0.00 0.00 4.85
834 1114 9.003658 CGCATCTTGGACCTTAAGAAATATATT 57.996 33.333 3.36 0.00 37.67 1.28
835 1115 7.607991 CCGCATCTTGGACCTTAAGAAATATAT 59.392 37.037 3.36 0.00 37.67 0.86
836 1116 6.934645 CCGCATCTTGGACCTTAAGAAATATA 59.065 38.462 3.36 0.00 37.67 0.86
837 1117 5.765182 CCGCATCTTGGACCTTAAGAAATAT 59.235 40.000 3.36 0.00 37.67 1.28
851 1131 4.789481 GCACATTATTACACCGCATCTTGG 60.789 45.833 0.00 0.00 0.00 3.61
852 1132 4.201901 TGCACATTATTACACCGCATCTTG 60.202 41.667 0.00 0.00 0.00 3.02
862 1142 9.929722 GAAAAATATCGACTGCACATTATTACA 57.070 29.630 0.00 0.00 0.00 2.41
871 1151 5.810587 TCCTGTAGAAAAATATCGACTGCAC 59.189 40.000 0.00 0.00 0.00 4.57
876 1156 5.758296 TGGCATCCTGTAGAAAAATATCGAC 59.242 40.000 0.00 0.00 0.00 4.20
878 1158 6.808008 ATGGCATCCTGTAGAAAAATATCG 57.192 37.500 0.00 0.00 0.00 2.92
886 1166 2.173356 CTGGGAATGGCATCCTGTAGAA 59.827 50.000 0.00 0.00 39.57 2.10
888 1168 1.770658 TCTGGGAATGGCATCCTGTAG 59.229 52.381 0.00 5.14 39.57 2.74
890 1170 1.133575 CATCTGGGAATGGCATCCTGT 60.134 52.381 0.00 0.00 39.57 4.00
907 1187 9.155865 TGCTGTGCGAAATAGCAGATATTCATC 62.156 40.741 5.98 0.00 46.88 2.92
908 1188 7.458375 TGCTGTGCGAAATAGCAGATATTCAT 61.458 38.462 5.98 0.00 46.88 2.57
928 1208 0.555769 TCCCAAACCTTTCCTGCTGT 59.444 50.000 0.00 0.00 0.00 4.40
930 1210 2.158325 TCAATCCCAAACCTTTCCTGCT 60.158 45.455 0.00 0.00 0.00 4.24
932 1212 2.562738 GGTCAATCCCAAACCTTTCCTG 59.437 50.000 0.00 0.00 0.00 3.86
960 1240 4.072131 GGCAATCAGGACTCAGTTTTACA 58.928 43.478 0.00 0.00 0.00 2.41
967 1247 2.426024 CAAATGGGCAATCAGGACTCAG 59.574 50.000 0.00 0.00 0.00 3.35
998 1278 0.814410 ATGCTTCAGCTCTGCCATCG 60.814 55.000 0.00 0.00 42.66 3.84
1003 1283 0.662085 GGCTTATGCTTCAGCTCTGC 59.338 55.000 5.83 0.04 42.66 4.26
1011 1291 1.730064 TGTTCGAACGGCTTATGCTTC 59.270 47.619 22.48 0.00 39.59 3.86
1015 1295 2.724839 GCACTTGTTCGAACGGCTTATG 60.725 50.000 22.48 14.85 0.00 1.90
1023 1303 2.127758 CGCCGCACTTGTTCGAAC 60.128 61.111 21.42 21.42 0.00 3.95
1038 1318 1.532868 AGAATCTTCATTATGGCGCGC 59.467 47.619 25.94 25.94 0.00 6.86
1040 1320 7.862372 TCAATTTAAGAATCTTCATTATGGCGC 59.138 33.333 0.00 0.00 0.00 6.53
1054 1334 6.867816 TGCGTTGCTTCATTCAATTTAAGAAT 59.132 30.769 0.00 0.00 36.19 2.40
1057 1337 6.308524 TCATGCGTTGCTTCATTCAATTTAAG 59.691 34.615 0.00 0.00 0.00 1.85
1060 1340 4.558178 TCATGCGTTGCTTCATTCAATTT 58.442 34.783 0.00 0.00 0.00 1.82
1078 1358 6.961359 AATGTGATGCAAATTGAGTTCATG 57.039 33.333 0.00 0.00 0.00 3.07
1080 1360 6.762187 ACAAAATGTGATGCAAATTGAGTTCA 59.238 30.769 0.00 0.00 33.59 3.18
1099 1379 3.566742 GGAACCGTCCTTACACACAAAAT 59.433 43.478 0.00 0.00 41.24 1.82
1102 1382 1.202675 GGGAACCGTCCTTACACACAA 60.203 52.381 0.00 0.00 44.28 3.33
1118 1398 3.311511 TAGGGAGCAGCCGAGGGAA 62.312 63.158 0.00 0.00 37.63 3.97
1122 1402 2.136878 ATGGTAGGGAGCAGCCGAG 61.137 63.158 0.00 0.00 36.28 4.63
1123 1403 2.041922 ATGGTAGGGAGCAGCCGA 60.042 61.111 0.00 0.00 36.28 5.54
1124 1404 2.109799 CATGGTAGGGAGCAGCCG 59.890 66.667 0.00 0.00 36.28 5.52
1125 1405 1.153086 CACATGGTAGGGAGCAGCC 60.153 63.158 0.00 0.00 36.28 4.85
1126 1406 1.821332 GCACATGGTAGGGAGCAGC 60.821 63.158 0.00 0.00 36.28 5.25
1129 1409 0.462759 GTGAGCACATGGTAGGGAGC 60.463 60.000 0.00 0.00 0.00 4.70
1134 1414 2.749280 TGTCAGTGAGCACATGGTAG 57.251 50.000 3.19 0.00 0.00 3.18
1136 1416 2.574006 AATGTCAGTGAGCACATGGT 57.426 45.000 3.19 0.00 33.38 3.55
1138 1418 4.753610 CCCTATAATGTCAGTGAGCACATG 59.246 45.833 3.19 0.00 33.38 3.21
1143 1423 3.007398 CCTCCCCTATAATGTCAGTGAGC 59.993 52.174 0.00 0.00 0.00 4.26
1146 1426 2.289072 CGCCTCCCCTATAATGTCAGTG 60.289 54.545 0.00 0.00 0.00 3.66
1148 1428 1.971357 ACGCCTCCCCTATAATGTCAG 59.029 52.381 0.00 0.00 0.00 3.51
1150 1430 2.249139 AGACGCCTCCCCTATAATGTC 58.751 52.381 0.00 0.00 0.00 3.06
1152 1432 2.289694 CCAAGACGCCTCCCCTATAATG 60.290 54.545 0.00 0.00 0.00 1.90
1155 1435 0.559205 TCCAAGACGCCTCCCCTATA 59.441 55.000 0.00 0.00 0.00 1.31
1166 1446 3.574284 TCAAAAATGCCATCCAAGACG 57.426 42.857 0.00 0.00 0.00 4.18
1167 1447 5.178067 CACTTTCAAAAATGCCATCCAAGAC 59.822 40.000 0.00 0.00 0.00 3.01
1170 1450 5.033589 ACACTTTCAAAAATGCCATCCAA 57.966 34.783 0.00 0.00 0.00 3.53
1175 1455 4.441356 GGAGTGACACTTTCAAAAATGCCA 60.441 41.667 10.01 0.00 35.39 4.92
1177 1457 4.936891 AGGAGTGACACTTTCAAAAATGC 58.063 39.130 10.01 0.00 35.39 3.56
1183 1463 4.843728 ACTTGAAGGAGTGACACTTTCAA 58.156 39.130 24.10 24.10 35.39 2.69
1185 1465 4.025647 CGAACTTGAAGGAGTGACACTTTC 60.026 45.833 10.01 10.93 0.00 2.62
1188 1468 2.431057 ACGAACTTGAAGGAGTGACACT 59.569 45.455 8.12 8.12 0.00 3.55
1191 1471 1.527311 GCACGAACTTGAAGGAGTGAC 59.473 52.381 16.82 7.78 0.00 3.67
1192 1472 1.412710 AGCACGAACTTGAAGGAGTGA 59.587 47.619 16.82 0.00 0.00 3.41
1195 1475 2.872245 TGAAAGCACGAACTTGAAGGAG 59.128 45.455 0.00 0.00 0.00 3.69
1196 1476 2.872245 CTGAAAGCACGAACTTGAAGGA 59.128 45.455 0.00 0.00 0.00 3.36
1199 1479 3.309682 CAGTCTGAAAGCACGAACTTGAA 59.690 43.478 0.00 0.00 0.00 2.69
1201 1481 2.609459 ACAGTCTGAAAGCACGAACTTG 59.391 45.455 6.91 0.00 0.00 3.16
1203 1483 2.604046 ACAGTCTGAAAGCACGAACT 57.396 45.000 6.91 0.00 0.00 3.01
1209 1489 0.183492 AGGCCAACAGTCTGAAAGCA 59.817 50.000 5.01 0.00 0.00 3.91
1224 1504 4.329545 TTGACGGTCCAGCAGGCC 62.330 66.667 5.55 0.00 33.74 5.19
1228 1508 1.593196 CTTTTCTTGACGGTCCAGCA 58.407 50.000 5.55 0.00 0.00 4.41
1230 1510 1.071699 TCCCTTTTCTTGACGGTCCAG 59.928 52.381 5.55 4.15 0.00 3.86
1235 1515 2.224305 ACAGAGTCCCTTTTCTTGACGG 60.224 50.000 0.00 0.00 34.24 4.79
1236 1516 3.113260 ACAGAGTCCCTTTTCTTGACG 57.887 47.619 0.00 0.00 34.24 4.35
1247 1527 1.909700 TGCATTTGGAACAGAGTCCC 58.090 50.000 0.00 0.00 42.39 4.46
1248 1528 3.128242 CAGATGCATTTGGAACAGAGTCC 59.872 47.826 9.34 0.00 42.39 3.85
1249 1529 4.005650 TCAGATGCATTTGGAACAGAGTC 58.994 43.478 16.51 0.00 42.39 3.36
1250 1530 3.755378 GTCAGATGCATTTGGAACAGAGT 59.245 43.478 16.51 0.00 42.39 3.24
1255 1535 2.229543 TGCTGTCAGATGCATTTGGAAC 59.770 45.455 16.51 9.30 33.94 3.62
1256 1536 2.516906 TGCTGTCAGATGCATTTGGAA 58.483 42.857 16.51 5.22 33.94 3.53
1260 1540 5.047872 TGTGTTATTGCTGTCAGATGCATTT 60.048 36.000 3.32 0.00 39.07 2.32
1267 1547 4.450976 ACTGTTGTGTTATTGCTGTCAGA 58.549 39.130 3.32 0.00 0.00 3.27
1288 1568 4.991687 GGATTCATATCCTTCGTCTGGAAC 59.008 45.833 0.00 0.00 45.88 3.62
1300 1580 4.446371 GTCCCATCATCGGATTCATATCC 58.554 47.826 0.00 0.00 45.89 2.59
1301 1581 4.163078 AGGTCCCATCATCGGATTCATATC 59.837 45.833 0.00 0.00 0.00 1.63
1302 1582 4.080695 CAGGTCCCATCATCGGATTCATAT 60.081 45.833 0.00 0.00 0.00 1.78
1303 1583 3.261643 CAGGTCCCATCATCGGATTCATA 59.738 47.826 0.00 0.00 0.00 2.15
1365 1645 2.125552 TCTTCGGTGCGCCATGAG 60.126 61.111 18.18 10.46 34.09 2.90
1376 1656 1.215647 CTTCGTCCTGGGTCTTCGG 59.784 63.158 0.00 0.00 0.00 4.30
1389 1669 1.375326 GCAGGGGAAGAACCTTCGT 59.625 57.895 0.00 0.00 35.78 3.85
1403 1683 0.107312 CACCATGAAGAGAGGGCAGG 60.107 60.000 0.00 0.00 0.00 4.85
1432 1712 5.216648 ACAACCGTGATAAACAATTTTCCG 58.783 37.500 0.00 0.00 0.00 4.30
1435 1715 9.921637 AATGATACAACCGTGATAAACAATTTT 57.078 25.926 0.00 0.00 0.00 1.82
1439 1719 8.661257 CAGTAATGATACAACCGTGATAAACAA 58.339 33.333 0.00 0.00 34.29 2.83
1451 1731 5.577164 ACGTTCAGAGCAGTAATGATACAAC 59.423 40.000 0.00 0.00 34.29 3.32
1472 1755 5.271625 CGTACTAATGCAGAGATTGTACGT 58.728 41.667 19.82 0.00 43.42 3.57
1473 1756 5.791398 CGTACTAATGCAGAGATTGTACG 57.209 43.478 17.02 17.02 43.10 3.67
1474 1757 5.686397 GGACGTACTAATGCAGAGATTGTAC 59.314 44.000 5.45 6.01 0.00 2.90
1475 1758 5.358725 TGGACGTACTAATGCAGAGATTGTA 59.641 40.000 0.00 0.00 0.00 2.41
1495 1778 8.669946 TTAAAAAGGGAAATTTCATTGTGGAC 57.330 30.769 19.49 0.00 0.00 4.02
1545 1828 3.068024 TCTTGTCCAACCATTTGCTGAAC 59.932 43.478 0.00 0.00 0.00 3.18
1552 1835 3.641436 GGGAACTTCTTGTCCAACCATTT 59.359 43.478 0.00 0.00 0.00 2.32
1576 1859 6.384224 TGTTGATGACTTTGATTGCATTCTC 58.616 36.000 9.81 0.38 0.00 2.87
1631 1914 4.152223 CACACTTCATGTTATCGACTTGCA 59.848 41.667 0.00 0.00 40.64 4.08
1697 1980 2.095364 CCATCACTTGCAACAGCTTCTC 60.095 50.000 0.00 0.00 0.00 2.87
1750 2033 2.639286 GTTGCGACAGGCCAAGTG 59.361 61.111 5.01 0.00 42.61 3.16
1758 2041 0.657368 GTTTGCTTCGGTTGCGACAG 60.657 55.000 6.39 1.43 0.00 3.51
1760 2043 1.370051 GGTTTGCTTCGGTTGCGAC 60.370 57.895 0.00 0.00 0.00 5.19
1777 2060 1.764054 CCCTGGCCACTCTAGGAGG 60.764 68.421 0.00 0.00 45.56 4.30
1793 2076 4.141251 TGGAGGCCTAATTCTAATTGTCCC 60.141 45.833 4.42 0.00 0.00 4.46
1864 2147 4.523943 TGCAACAAAATGGACATAAGAGCT 59.476 37.500 0.00 0.00 0.00 4.09
1890 2173 0.987715 CACATTCTCAGAGCACGACG 59.012 55.000 0.00 0.00 0.00 5.12
1894 2177 5.840715 TCATAGATCACATTCTCAGAGCAC 58.159 41.667 0.00 0.00 0.00 4.40
1895 2178 6.494146 AGATCATAGATCACATTCTCAGAGCA 59.506 38.462 9.43 0.00 0.00 4.26
1932 2215 6.951062 TGTTCAACAATAACCAACAGATCA 57.049 33.333 0.00 0.00 0.00 2.92
1947 2231 2.937149 TCCAACGACGAATTGTTCAACA 59.063 40.909 0.00 0.00 29.14 3.33
1965 2249 3.333029 TCAGCGTCTCATTGAAATCCA 57.667 42.857 0.00 0.00 0.00 3.41
1974 2258 3.599730 TCAGAATGTTCAGCGTCTCAT 57.400 42.857 0.00 0.00 37.40 2.90
2039 2323 8.404765 TGTATGTTGTGGCAAGATAATATGTTG 58.595 33.333 5.85 5.85 36.68 3.33
2043 2327 8.579006 CCAATGTATGTTGTGGCAAGATAATAT 58.421 33.333 0.00 0.00 0.00 1.28
2044 2328 7.559533 ACCAATGTATGTTGTGGCAAGATAATA 59.440 33.333 0.00 0.00 34.27 0.98
2045 2329 6.380846 ACCAATGTATGTTGTGGCAAGATAAT 59.619 34.615 0.00 0.00 34.27 1.28
2046 2330 5.714333 ACCAATGTATGTTGTGGCAAGATAA 59.286 36.000 0.00 0.00 34.27 1.75
2065 2349 6.239345 GGATTAGACATTAGAGTCGGACCAAT 60.239 42.308 4.14 0.00 43.24 3.16
2071 2355 5.290386 GGTTGGATTAGACATTAGAGTCGG 58.710 45.833 0.00 0.00 43.24 4.79
2079 2363 3.009723 CAGTGCGGTTGGATTAGACATT 58.990 45.455 0.00 0.00 0.00 2.71
2095 2379 4.152607 GAAGGATTCAAGTTGACAGTGC 57.847 45.455 4.68 0.45 46.62 4.40
2126 2410 7.517321 TGCAACTTTCAAATCAACACTTTTTC 58.483 30.769 0.00 0.00 0.00 2.29
2138 2422 7.790823 ACTAAAGCATTTGCAACTTTCAAAT 57.209 28.000 14.68 0.00 42.83 2.32
2174 2459 8.443160 CGATAAAGACTGAATTTTCTTACTGCA 58.557 33.333 0.00 0.00 31.62 4.41
2183 2468 7.995488 AGGGATCATCGATAAAGACTGAATTTT 59.005 33.333 0.00 0.00 0.00 1.82
2188 2473 5.140454 TCAGGGATCATCGATAAAGACTGA 58.860 41.667 13.80 13.80 0.00 3.41
2247 2538 0.108585 GGTGCTCTTCCCTGAACACA 59.891 55.000 0.00 0.00 35.46 3.72
2258 2549 2.433446 CAGTGCAGGGGTGCTCTT 59.567 61.111 0.00 0.00 36.63 2.85
2261 2552 2.490270 GAATCCAGTGCAGGGGTGCT 62.490 60.000 4.59 0.00 35.49 4.40
2307 2623 5.852807 TGATCCTAGAGACCTAGACTGGTAT 59.147 44.000 0.00 0.00 44.00 2.73
2316 2632 6.126332 ACTGATCTTGTGATCCTAGAGACCTA 60.126 42.308 0.00 0.00 46.34 3.08
2317 2633 5.136068 TGATCTTGTGATCCTAGAGACCT 57.864 43.478 0.00 0.00 46.34 3.85
2318 2634 4.892934 ACTGATCTTGTGATCCTAGAGACC 59.107 45.833 0.00 0.00 46.34 3.85
2319 2635 5.009610 GGACTGATCTTGTGATCCTAGAGAC 59.990 48.000 0.00 0.00 46.34 3.36
2320 2636 5.136828 GGACTGATCTTGTGATCCTAGAGA 58.863 45.833 0.00 0.00 46.34 3.10
2321 2637 4.280677 GGGACTGATCTTGTGATCCTAGAG 59.719 50.000 0.00 0.00 46.34 2.43
2322 2638 4.078922 AGGGACTGATCTTGTGATCCTAGA 60.079 45.833 0.00 0.00 46.34 2.43
2323 2639 4.222336 AGGGACTGATCTTGTGATCCTAG 58.778 47.826 0.00 0.00 46.34 3.02
2324 2640 4.271807 AGGGACTGATCTTGTGATCCTA 57.728 45.455 0.00 0.00 46.34 2.94
2342 2658 2.165845 CAGTCGTAGTGGTTTCCTAGGG 59.834 54.545 9.46 0.00 0.00 3.53
2343 2659 3.087031 TCAGTCGTAGTGGTTTCCTAGG 58.913 50.000 0.82 0.82 0.00 3.02
2348 2664 3.678548 GTCCAATCAGTCGTAGTGGTTTC 59.321 47.826 0.00 0.00 0.00 2.78
2360 2676 2.831685 TTGCGTGTAGTCCAATCAGT 57.168 45.000 0.00 0.00 0.00 3.41
2361 2677 4.393062 AGATTTTGCGTGTAGTCCAATCAG 59.607 41.667 0.00 0.00 0.00 2.90
2362 2678 4.323417 AGATTTTGCGTGTAGTCCAATCA 58.677 39.130 0.00 0.00 0.00 2.57
2363 2679 4.201822 GGAGATTTTGCGTGTAGTCCAATC 60.202 45.833 0.00 0.00 0.00 2.67
2364 2680 3.689649 GGAGATTTTGCGTGTAGTCCAAT 59.310 43.478 0.00 0.00 0.00 3.16
2365 2681 3.071479 GGAGATTTTGCGTGTAGTCCAA 58.929 45.455 0.00 0.00 0.00 3.53
2366 2682 2.037902 TGGAGATTTTGCGTGTAGTCCA 59.962 45.455 0.00 0.00 0.00 4.02
2367 2683 2.695359 TGGAGATTTTGCGTGTAGTCC 58.305 47.619 0.00 0.00 0.00 3.85
2371 2697 5.697473 TTCATTTGGAGATTTTGCGTGTA 57.303 34.783 0.00 0.00 0.00 2.90
2376 2702 6.707608 GGGGATATTTCATTTGGAGATTTTGC 59.292 38.462 0.00 0.00 0.00 3.68
2377 2703 6.925165 CGGGGATATTTCATTTGGAGATTTTG 59.075 38.462 0.00 0.00 0.00 2.44
2382 2708 3.719479 TCCGGGGATATTTCATTTGGAGA 59.281 43.478 0.00 0.00 0.00 3.71
2388 2714 2.969950 TCGTCTCCGGGGATATTTCATT 59.030 45.455 7.65 0.00 33.95 2.57
2428 2757 1.591703 CTCCAGCGTCACAAGCCTA 59.408 57.895 0.00 0.00 34.64 3.93
2443 2772 1.299773 CTCTCCGCGATTCTGCTCC 60.300 63.158 8.23 0.00 0.00 4.70
2466 2795 4.208686 CGGCTAGACCTGTCCCGC 62.209 72.222 0.00 1.32 35.61 6.13
2471 2800 0.251653 TCCTCAACGGCTAGACCTGT 60.252 55.000 0.00 0.00 35.61 4.00
2475 2804 0.802607 CGCTTCCTCAACGGCTAGAC 60.803 60.000 0.00 0.00 0.00 2.59
2482 2811 2.430921 ACGAGCGCTTCCTCAACG 60.431 61.111 13.26 11.52 0.00 4.10
2493 2822 0.917259 GCTGTATTCACTGACGAGCG 59.083 55.000 0.00 0.00 0.00 5.03
2501 2830 4.397420 TGTTGGATGTTGCTGTATTCACT 58.603 39.130 0.00 0.00 0.00 3.41
2503 2832 4.826733 AGTTGTTGGATGTTGCTGTATTCA 59.173 37.500 0.00 0.00 0.00 2.57
2508 2837 4.085357 TCTAGTTGTTGGATGTTGCTGT 57.915 40.909 0.00 0.00 0.00 4.40
2509 2838 4.083110 CCTTCTAGTTGTTGGATGTTGCTG 60.083 45.833 0.00 0.00 0.00 4.41
2510 2839 4.074970 CCTTCTAGTTGTTGGATGTTGCT 58.925 43.478 0.00 0.00 0.00 3.91
2511 2840 3.191371 CCCTTCTAGTTGTTGGATGTTGC 59.809 47.826 0.00 0.00 0.00 4.17
2512 2841 4.651778 TCCCTTCTAGTTGTTGGATGTTG 58.348 43.478 0.00 0.00 0.00 3.33
2513 2842 4.993705 TCCCTTCTAGTTGTTGGATGTT 57.006 40.909 0.00 0.00 0.00 2.71
2514 2843 4.993705 TTCCCTTCTAGTTGTTGGATGT 57.006 40.909 0.00 0.00 0.00 3.06
2515 2844 6.094603 CAGATTTCCCTTCTAGTTGTTGGATG 59.905 42.308 0.00 0.00 0.00 3.51
2516 2845 6.012508 TCAGATTTCCCTTCTAGTTGTTGGAT 60.013 38.462 0.00 0.00 0.00 3.41
2517 2846 5.309543 TCAGATTTCCCTTCTAGTTGTTGGA 59.690 40.000 0.00 0.00 0.00 3.53
2518 2847 5.412904 GTCAGATTTCCCTTCTAGTTGTTGG 59.587 44.000 0.00 0.00 0.00 3.77
2519 2848 5.997746 TGTCAGATTTCCCTTCTAGTTGTTG 59.002 40.000 0.00 0.00 0.00 3.33
2520 2849 6.183361 ACTGTCAGATTTCCCTTCTAGTTGTT 60.183 38.462 6.91 0.00 0.00 2.83
2521 2850 5.308237 ACTGTCAGATTTCCCTTCTAGTTGT 59.692 40.000 6.91 0.00 0.00 3.32
2523 2852 5.799213 CACTGTCAGATTTCCCTTCTAGTT 58.201 41.667 6.91 0.00 0.00 2.24
2524 2853 4.323104 GCACTGTCAGATTTCCCTTCTAGT 60.323 45.833 6.91 0.00 0.00 2.57
2526 2855 3.582647 TGCACTGTCAGATTTCCCTTCTA 59.417 43.478 6.91 0.00 0.00 2.10
2527 2856 2.373169 TGCACTGTCAGATTTCCCTTCT 59.627 45.455 6.91 0.00 0.00 2.85
2528 2857 2.783135 TGCACTGTCAGATTTCCCTTC 58.217 47.619 6.91 0.00 0.00 3.46
2533 2913 4.863491 ACAAACATGCACTGTCAGATTTC 58.137 39.130 6.91 0.00 36.98 2.17
2569 2949 6.233430 ACGAAGATGAATATATGTTGCTGC 57.767 37.500 0.00 0.00 0.00 5.25
2598 2980 8.764524 TTGTGTTTTTGTTTGCAAATAGTACT 57.235 26.923 16.21 0.00 43.26 2.73
2619 3004 4.569162 TGTACCGAAGAAGAAGTGTTTGTG 59.431 41.667 0.00 0.00 0.00 3.33
2620 3005 4.761975 TGTACCGAAGAAGAAGTGTTTGT 58.238 39.130 0.00 0.00 0.00 2.83
2621 3006 5.499047 GTTGTACCGAAGAAGAAGTGTTTG 58.501 41.667 0.00 0.00 0.00 2.93
2622 3007 4.573607 GGTTGTACCGAAGAAGAAGTGTTT 59.426 41.667 0.00 0.00 0.00 2.83
2624 3009 3.493873 GGGTTGTACCGAAGAAGAAGTGT 60.494 47.826 0.00 0.00 39.83 3.55
2625 3010 3.064931 GGGTTGTACCGAAGAAGAAGTG 58.935 50.000 0.00 0.00 39.83 3.16
2626 3011 2.970640 AGGGTTGTACCGAAGAAGAAGT 59.029 45.455 0.00 0.00 39.83 3.01
2627 3012 3.258622 AGAGGGTTGTACCGAAGAAGAAG 59.741 47.826 0.00 0.00 39.83 2.85
2628 3013 3.236896 AGAGGGTTGTACCGAAGAAGAA 58.763 45.455 0.00 0.00 39.83 2.52
2629 3014 2.885616 AGAGGGTTGTACCGAAGAAGA 58.114 47.619 0.00 0.00 39.83 2.87
2630 3015 4.796038 TTAGAGGGTTGTACCGAAGAAG 57.204 45.455 0.00 0.00 39.83 2.85
2631 3016 5.750352 ATTTAGAGGGTTGTACCGAAGAA 57.250 39.130 0.00 0.00 39.83 2.52
2632 3017 5.716228 TGTATTTAGAGGGTTGTACCGAAGA 59.284 40.000 0.00 0.00 39.83 2.87
2633 3018 5.969423 TGTATTTAGAGGGTTGTACCGAAG 58.031 41.667 0.00 0.00 39.83 3.79
2634 3019 5.999205 TGTATTTAGAGGGTTGTACCGAA 57.001 39.130 0.00 0.00 39.83 4.30
2635 3020 5.245751 TGTTGTATTTAGAGGGTTGTACCGA 59.754 40.000 0.00 0.00 39.83 4.69
2636 3021 5.481105 TGTTGTATTTAGAGGGTTGTACCG 58.519 41.667 0.00 0.00 39.83 4.02
2637 3022 6.128472 CGTTGTTGTATTTAGAGGGTTGTACC 60.128 42.308 0.00 0.00 37.60 3.34
2638 3023 6.128472 CCGTTGTTGTATTTAGAGGGTTGTAC 60.128 42.308 0.00 0.00 0.00 2.90
2639 3024 5.933463 CCGTTGTTGTATTTAGAGGGTTGTA 59.067 40.000 0.00 0.00 0.00 2.41
2640 3025 4.758165 CCGTTGTTGTATTTAGAGGGTTGT 59.242 41.667 0.00 0.00 0.00 3.32
2641 3026 4.379082 GCCGTTGTTGTATTTAGAGGGTTG 60.379 45.833 0.00 0.00 0.00 3.77
2642 3027 3.754850 GCCGTTGTTGTATTTAGAGGGTT 59.245 43.478 0.00 0.00 0.00 4.11
2643 3028 3.008704 AGCCGTTGTTGTATTTAGAGGGT 59.991 43.478 0.00 0.00 0.00 4.34
2644 3029 3.374058 CAGCCGTTGTTGTATTTAGAGGG 59.626 47.826 0.00 0.00 0.00 4.30
2645 3030 4.250464 TCAGCCGTTGTTGTATTTAGAGG 58.750 43.478 0.00 0.00 0.00 3.69
2646 3031 5.168569 TCTCAGCCGTTGTTGTATTTAGAG 58.831 41.667 0.00 0.00 0.00 2.43
2647 3032 5.142061 TCTCAGCCGTTGTTGTATTTAGA 57.858 39.130 0.00 0.00 0.00 2.10
2648 3033 5.276395 CGATCTCAGCCGTTGTTGTATTTAG 60.276 44.000 0.00 0.00 0.00 1.85
2649 3034 4.565166 CGATCTCAGCCGTTGTTGTATTTA 59.435 41.667 0.00 0.00 0.00 1.40
2650 3035 3.370978 CGATCTCAGCCGTTGTTGTATTT 59.629 43.478 0.00 0.00 0.00 1.40
2651 3036 2.930040 CGATCTCAGCCGTTGTTGTATT 59.070 45.455 0.00 0.00 0.00 1.89
2652 3037 2.540515 CGATCTCAGCCGTTGTTGTAT 58.459 47.619 0.00 0.00 0.00 2.29
2653 3038 1.990799 CGATCTCAGCCGTTGTTGTA 58.009 50.000 0.00 0.00 0.00 2.41
2654 3039 1.291877 GCGATCTCAGCCGTTGTTGT 61.292 55.000 0.00 0.00 0.00 3.32
2655 3040 1.016130 AGCGATCTCAGCCGTTGTTG 61.016 55.000 0.00 0.00 34.64 3.33
2656 3041 0.737715 GAGCGATCTCAGCCGTTGTT 60.738 55.000 0.00 0.00 39.16 2.83
2657 3042 1.153745 GAGCGATCTCAGCCGTTGT 60.154 57.895 0.00 0.00 39.16 3.32
2658 3043 1.880340 GGAGCGATCTCAGCCGTTG 60.880 63.158 0.00 0.00 41.13 4.10
2659 3044 2.496817 GGAGCGATCTCAGCCGTT 59.503 61.111 0.00 0.00 41.13 4.44
2660 3045 3.893763 CGGAGCGATCTCAGCCGT 61.894 66.667 0.00 0.00 41.13 5.68
2661 3046 2.543802 TACGGAGCGATCTCAGCCG 61.544 63.158 13.36 13.36 41.13 5.52
2662 3047 1.008309 GTACGGAGCGATCTCAGCC 60.008 63.158 0.00 0.00 41.13 4.85
2663 3048 1.008309 GGTACGGAGCGATCTCAGC 60.008 63.158 0.00 0.00 41.13 4.26
2664 3049 1.655329 GGGTACGGAGCGATCTCAG 59.345 63.158 0.00 0.00 41.13 3.35
2665 3050 1.826921 GGGGTACGGAGCGATCTCA 60.827 63.158 0.00 0.00 41.13 3.27
2666 3051 1.108132 AAGGGGTACGGAGCGATCTC 61.108 60.000 0.00 0.00 38.62 2.75
2667 3052 1.076192 AAGGGGTACGGAGCGATCT 60.076 57.895 0.00 0.00 0.00 2.75
2668 3053 1.363080 GAAGGGGTACGGAGCGATC 59.637 63.158 0.00 0.00 0.00 3.69
2669 3054 0.759436 ATGAAGGGGTACGGAGCGAT 60.759 55.000 0.00 0.00 0.00 4.58
2670 3055 0.974010 AATGAAGGGGTACGGAGCGA 60.974 55.000 0.00 0.00 0.00 4.93
2671 3056 0.748450 TAATGAAGGGGTACGGAGCG 59.252 55.000 0.00 0.00 0.00 5.03
2672 3057 2.994186 TTAATGAAGGGGTACGGAGC 57.006 50.000 0.00 0.00 0.00 4.70
2673 3058 4.638865 CCTTTTTAATGAAGGGGTACGGAG 59.361 45.833 9.30 0.00 39.99 4.63
2674 3059 4.289148 TCCTTTTTAATGAAGGGGTACGGA 59.711 41.667 14.71 0.00 43.13 4.69
2675 3060 4.591929 TCCTTTTTAATGAAGGGGTACGG 58.408 43.478 14.71 0.00 43.13 4.02
2676 3061 6.485648 CCTATCCTTTTTAATGAAGGGGTACG 59.514 42.308 14.71 0.00 43.13 3.67
2677 3062 7.580007 TCCTATCCTTTTTAATGAAGGGGTAC 58.420 38.462 14.71 0.00 43.13 3.34
2678 3063 7.774694 TCCTATCCTTTTTAATGAAGGGGTA 57.225 36.000 14.71 9.40 43.13 3.69
2679 3064 6.668133 TCCTATCCTTTTTAATGAAGGGGT 57.332 37.500 14.71 8.94 43.13 4.95
2680 3065 6.431234 CGATCCTATCCTTTTTAATGAAGGGG 59.569 42.308 14.71 10.10 43.13 4.79
2681 3066 6.998673 ACGATCCTATCCTTTTTAATGAAGGG 59.001 38.462 14.71 1.11 43.13 3.95
2682 3067 7.173390 GGACGATCCTATCCTTTTTAATGAAGG 59.827 40.741 10.46 10.46 38.29 3.46
2683 3068 7.173390 GGGACGATCCTATCCTTTTTAATGAAG 59.827 40.741 0.00 0.00 36.57 3.02
2684 3069 6.996282 GGGACGATCCTATCCTTTTTAATGAA 59.004 38.462 0.00 0.00 36.57 2.57
2685 3070 6.100569 TGGGACGATCCTATCCTTTTTAATGA 59.899 38.462 0.00 0.00 36.57 2.57
2686 3071 6.296026 TGGGACGATCCTATCCTTTTTAATG 58.704 40.000 0.00 0.00 36.57 1.90
2687 3072 6.509523 TGGGACGATCCTATCCTTTTTAAT 57.490 37.500 0.00 0.00 36.57 1.40
2688 3073 5.961398 TGGGACGATCCTATCCTTTTTAA 57.039 39.130 0.00 0.00 36.57 1.52
2689 3074 6.110411 GATGGGACGATCCTATCCTTTTTA 57.890 41.667 15.00 0.00 45.55 1.52
2690 3075 4.974399 GATGGGACGATCCTATCCTTTTT 58.026 43.478 15.00 0.00 45.55 1.94
2691 3076 4.625607 GATGGGACGATCCTATCCTTTT 57.374 45.455 15.00 0.00 45.55 2.27
2697 3082 6.433847 TTTTATGTGATGGGACGATCCTAT 57.566 37.500 3.24 3.24 40.73 2.57
2698 3083 5.880164 TTTTATGTGATGGGACGATCCTA 57.120 39.130 0.00 0.00 36.57 2.94
2699 3084 4.771114 TTTTATGTGATGGGACGATCCT 57.229 40.909 0.00 0.00 36.57 3.24
2700 3085 4.261197 GCTTTTTATGTGATGGGACGATCC 60.261 45.833 0.00 0.00 35.23 3.36
2701 3086 4.261197 GGCTTTTTATGTGATGGGACGATC 60.261 45.833 0.00 0.00 0.00 3.69
2702 3087 3.632145 GGCTTTTTATGTGATGGGACGAT 59.368 43.478 0.00 0.00 0.00 3.73
2703 3088 3.013921 GGCTTTTTATGTGATGGGACGA 58.986 45.455 0.00 0.00 0.00 4.20
2704 3089 2.099098 GGGCTTTTTATGTGATGGGACG 59.901 50.000 0.00 0.00 0.00 4.79
2705 3090 2.430694 GGGGCTTTTTATGTGATGGGAC 59.569 50.000 0.00 0.00 0.00 4.46
2706 3091 2.625617 GGGGGCTTTTTATGTGATGGGA 60.626 50.000 0.00 0.00 0.00 4.37
2707 3092 1.762370 GGGGGCTTTTTATGTGATGGG 59.238 52.381 0.00 0.00 0.00 4.00
2708 3093 1.408702 CGGGGGCTTTTTATGTGATGG 59.591 52.381 0.00 0.00 0.00 3.51
2709 3094 1.202405 GCGGGGGCTTTTTATGTGATG 60.202 52.381 0.00 0.00 0.00 3.07
2710 3095 1.111277 GCGGGGGCTTTTTATGTGAT 58.889 50.000 0.00 0.00 0.00 3.06
2711 3096 0.968393 GGCGGGGGCTTTTTATGTGA 60.968 55.000 0.00 0.00 0.00 3.58
2712 3097 1.515487 GGCGGGGGCTTTTTATGTG 59.485 57.895 0.00 0.00 0.00 3.21
2713 3098 1.684391 GGGCGGGGGCTTTTTATGT 60.684 57.895 0.00 0.00 0.00 2.29
2714 3099 2.781158 CGGGCGGGGGCTTTTTATG 61.781 63.158 0.00 0.00 0.00 1.90
2715 3100 2.441348 CGGGCGGGGGCTTTTTAT 60.441 61.111 0.00 0.00 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.