Multiple sequence alignment - TraesCS2D01G375500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G375500 chr2D 100.000 2579 0 0 1 2579 480130108 480132686 0.000000e+00 4763
1 TraesCS2D01G375500 chr2D 89.516 248 26 0 2332 2579 480160181 480160428 5.360000e-82 315
2 TraesCS2D01G375500 chr2D 91.892 148 8 1 1108 1251 190368489 190368636 1.210000e-48 204
3 TraesCS2D01G375500 chr2D 83.721 215 33 2 1227 1440 480131286 480131499 4.350000e-48 202
4 TraesCS2D01G375500 chr2D 83.721 215 33 2 1179 1392 480131334 480131547 4.350000e-48 202
5 TraesCS2D01G375500 chr2D 87.261 157 18 2 2009 2163 399968760 399968916 7.330000e-41 178
6 TraesCS2D01G375500 chr2D 82.609 207 30 2 1108 1308 625154871 625154665 7.330000e-41 178
7 TraesCS2D01G375500 chr2D 88.393 112 8 2 1872 1979 147229978 147229868 2.080000e-26 130
8 TraesCS2D01G375500 chr2B 88.945 1393 95 32 520 1886 562976940 562978299 0.000000e+00 1664
9 TraesCS2D01G375500 chr2B 95.417 240 11 0 2340 2579 562978705 562978944 1.450000e-102 383
10 TraesCS2D01G375500 chr2B 89.130 230 25 0 2350 2579 563024941 563025170 1.170000e-73 287
11 TraesCS2D01G375500 chr2B 85.167 209 31 0 1178 1386 562977633 562977841 5.590000e-52 215
12 TraesCS2D01G375500 chr2B 87.500 176 22 0 1265 1440 562977624 562977799 1.210000e-48 204
13 TraesCS2D01G375500 chr2B 95.789 95 3 1 1885 1979 732865161 732865254 4.440000e-33 152
14 TraesCS2D01G375500 chr2A 90.909 847 57 10 552 1386 622455880 622456718 0.000000e+00 1120
15 TraesCS2D01G375500 chr2A 84.081 691 73 15 1227 1883 622456511 622457198 1.300000e-177 632
16 TraesCS2D01G375500 chr2A 91.223 319 24 4 2264 2579 622457263 622457580 5.100000e-117 431
17 TraesCS2D01G375500 chr2A 80.804 547 63 13 48 553 622455127 622455672 8.650000e-105 390
18 TraesCS2D01G375500 chr2A 89.516 248 26 0 2332 2579 622693907 622694154 5.360000e-82 315
19 TraesCS2D01G375500 chr2A 85.714 161 17 3 2010 2167 79316158 79316001 5.710000e-37 165
20 TraesCS2D01G375500 chr2A 85.030 167 17 6 2006 2168 747617527 747617365 2.050000e-36 163
21 TraesCS2D01G375500 chr2A 95.699 93 3 1 1888 1979 424544451 424544359 5.750000e-32 148
22 TraesCS2D01G375500 chr2A 90.991 111 6 4 1876 1982 424544345 424544455 2.070000e-31 147
23 TraesCS2D01G375500 chr2A 92.632 95 6 1 1888 1981 455350301 455350207 4.480000e-28 135
24 TraesCS2D01G375500 chr6D 85.366 205 26 1 1108 1308 86025605 86025809 2.600000e-50 209
25 TraesCS2D01G375500 chr5B 81.933 238 39 4 1169 1404 546813893 546814128 5.630000e-47 198
26 TraesCS2D01G375500 chr5B 93.388 121 5 3 2190 2308 281433786 281433905 2.640000e-40 176
27 TraesCS2D01G375500 chr5B 94.017 117 6 1 2189 2305 493017648 493017763 2.640000e-40 176
28 TraesCS2D01G375500 chrUn 96.429 112 3 1 2187 2298 218382244 218382134 1.580000e-42 183
29 TraesCS2D01G375500 chrUn 96.429 112 3 1 2187 2298 218399792 218399682 1.580000e-42 183
30 TraesCS2D01G375500 chrUn 86.709 158 15 4 2011 2165 96471030 96471184 1.230000e-38 171
31 TraesCS2D01G375500 chrUn 94.595 111 5 1 2187 2297 352766986 352766877 1.230000e-38 171
32 TraesCS2D01G375500 chr1B 95.652 115 3 2 2190 2303 359907346 359907233 1.580000e-42 183
33 TraesCS2D01G375500 chr1B 94.118 119 6 1 2190 2308 624663025 624662908 2.040000e-41 180
34 TraesCS2D01G375500 chr1D 95.575 113 4 1 2188 2300 279934340 279934451 2.040000e-41 180
35 TraesCS2D01G375500 chr1D 87.261 157 14 4 2010 2163 246650134 246649981 9.490000e-40 174
36 TraesCS2D01G375500 chr5A 92.683 123 6 3 2190 2311 69844894 69844774 9.490000e-40 174
37 TraesCS2D01G375500 chr5A 94.565 92 3 2 1888 1979 229490744 229490655 9.620000e-30 141
38 TraesCS2D01G375500 chr5A 93.478 92 4 1 1888 1979 229490655 229490744 4.480000e-28 135
39 TraesCS2D01G375500 chr5A 75.472 265 42 10 1306 1569 606700319 606700561 9.760000e-20 108
40 TraesCS2D01G375500 chr7A 86.709 158 14 5 2011 2165 94784866 94784713 4.410000e-38 169
41 TraesCS2D01G375500 chr7A 82.659 173 28 2 11 182 652924256 652924085 4.440000e-33 152
42 TraesCS2D01G375500 chr4A 86.335 161 15 5 2011 2167 460230801 460230644 4.410000e-38 169
43 TraesCS2D01G375500 chr3B 85.625 160 16 5 2011 2167 245935613 245935458 7.390000e-36 161
44 TraesCS2D01G375500 chr7B 85.185 162 14 6 2007 2163 437670384 437670540 9.550000e-35 158
45 TraesCS2D01G375500 chr3D 83.237 173 27 2 11 182 596827534 596827363 9.550000e-35 158
46 TraesCS2D01G375500 chr3A 94.737 95 4 1 1887 1980 38429454 38429360 2.070000e-31 147
47 TraesCS2D01G375500 chr4B 92.473 93 6 1 1888 1979 615554490 615554398 5.790000e-27 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G375500 chr2D 480130108 480132686 2578 False 1722.333333 4763 89.147333 1 2579 3 chr2D.!!$F4 2578
1 TraesCS2D01G375500 chr2B 562976940 562978944 2004 False 616.500000 1664 89.257250 520 2579 4 chr2B.!!$F3 2059
2 TraesCS2D01G375500 chr2A 622455127 622457580 2453 False 643.250000 1120 86.754250 48 2579 4 chr2A.!!$F3 2531

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
43 44 0.035152 TCCCATGCTCACACATCACC 60.035 55.0 0.0 0.0 0.0 4.02 F
229 230 0.042581 TGGAGGAGATGTACTGGGCA 59.957 55.0 0.0 0.0 0.0 5.36 F
231 232 0.105778 GAGGAGATGTACTGGGCAGC 59.894 60.0 0.0 0.0 0.0 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1255 1529 0.461961 GTTAGCTGCGGGAGAGTGAT 59.538 55.000 0.00 0.00 0.00 3.06 R
1572 1894 0.811616 CTCTGGTTCGTGCCTATGCC 60.812 60.000 0.40 0.00 36.33 4.40 R
1895 2254 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.534721 AAGCAACTAACCTCTCCGC 57.465 52.632 0.00 0.00 0.00 5.54
19 20 0.036294 AAGCAACTAACCTCTCCGCC 60.036 55.000 0.00 0.00 0.00 6.13
20 21 1.810030 GCAACTAACCTCTCCGCCG 60.810 63.158 0.00 0.00 0.00 6.46
21 22 1.153628 CAACTAACCTCTCCGCCGG 60.154 63.158 0.00 0.00 0.00 6.13
22 23 3.015312 AACTAACCTCTCCGCCGGC 62.015 63.158 19.07 19.07 0.00 6.13
23 24 3.148279 CTAACCTCTCCGCCGGCT 61.148 66.667 26.68 5.16 0.00 5.52
24 25 2.682494 TAACCTCTCCGCCGGCTT 60.682 61.111 26.68 12.64 0.00 4.35
25 26 2.630592 CTAACCTCTCCGCCGGCTTC 62.631 65.000 26.68 0.00 0.00 3.86
34 35 4.802051 GCCGGCTTCCCATGCTCA 62.802 66.667 22.15 0.00 0.00 4.26
35 36 2.825836 CCGGCTTCCCATGCTCAC 60.826 66.667 0.00 0.00 0.00 3.51
36 37 2.046023 CGGCTTCCCATGCTCACA 60.046 61.111 0.00 0.00 0.00 3.58
37 38 2.401766 CGGCTTCCCATGCTCACAC 61.402 63.158 0.00 0.00 0.00 3.82
38 39 1.303561 GGCTTCCCATGCTCACACA 60.304 57.895 0.00 0.00 0.00 3.72
39 40 0.682209 GGCTTCCCATGCTCACACAT 60.682 55.000 0.00 0.00 0.00 3.21
40 41 0.737219 GCTTCCCATGCTCACACATC 59.263 55.000 0.00 0.00 0.00 3.06
41 42 1.951895 GCTTCCCATGCTCACACATCA 60.952 52.381 0.00 0.00 0.00 3.07
42 43 1.741706 CTTCCCATGCTCACACATCAC 59.258 52.381 0.00 0.00 0.00 3.06
43 44 0.035152 TCCCATGCTCACACATCACC 60.035 55.000 0.00 0.00 0.00 4.02
44 45 0.322726 CCCATGCTCACACATCACCA 60.323 55.000 0.00 0.00 0.00 4.17
45 46 1.683938 CCCATGCTCACACATCACCAT 60.684 52.381 0.00 0.00 0.00 3.55
46 47 1.674441 CCATGCTCACACATCACCATC 59.326 52.381 0.00 0.00 0.00 3.51
47 48 2.361789 CATGCTCACACATCACCATCA 58.638 47.619 0.00 0.00 0.00 3.07
48 49 1.812235 TGCTCACACATCACCATCAC 58.188 50.000 0.00 0.00 0.00 3.06
49 50 1.089920 GCTCACACATCACCATCACC 58.910 55.000 0.00 0.00 0.00 4.02
62 63 0.798776 CATCACCTCTTCGCCAACAC 59.201 55.000 0.00 0.00 0.00 3.32
90 91 7.182206 ACAGTAGTTTGGGTCCTTGATTATAGT 59.818 37.037 0.00 0.00 0.00 2.12
118 119 7.228308 GGGATCTAGACCAATCAAAGAAATGAG 59.772 40.741 11.82 0.00 31.76 2.90
165 166 3.054166 CGAACCGGAAAAACAAAATCCC 58.946 45.455 9.46 0.00 0.00 3.85
171 172 4.824537 CCGGAAAAACAAAATCCCCAAATT 59.175 37.500 0.00 0.00 0.00 1.82
172 173 5.278218 CCGGAAAAACAAAATCCCCAAATTG 60.278 40.000 0.00 0.00 0.00 2.32
183 184 4.750833 TCCCCAAATTGAAACCCTAGAA 57.249 40.909 0.00 0.00 0.00 2.10
192 193 3.674997 TGAAACCCTAGAATGCACTGAC 58.325 45.455 0.00 0.00 0.00 3.51
193 194 2.789409 AACCCTAGAATGCACTGACC 57.211 50.000 0.00 0.00 0.00 4.02
196 197 2.026822 ACCCTAGAATGCACTGACCTTG 60.027 50.000 0.00 0.00 0.00 3.61
202 203 0.952497 ATGCACTGACCTTGACAGCG 60.952 55.000 0.00 0.00 38.74 5.18
228 229 0.755686 CTGGAGGAGATGTACTGGGC 59.244 60.000 0.00 0.00 0.00 5.36
229 230 0.042581 TGGAGGAGATGTACTGGGCA 59.957 55.000 0.00 0.00 0.00 5.36
231 232 0.105778 GAGGAGATGTACTGGGCAGC 59.894 60.000 0.00 0.00 0.00 5.25
237 238 0.686441 ATGTACTGGGCAGCCGAGTA 60.686 55.000 27.71 27.71 40.70 2.59
254 255 1.962822 TACTCGCTGGTGTCGTCGT 60.963 57.895 0.00 0.00 0.00 4.34
261 262 1.601162 GCTGGTGTCGTCGTTGTTCTA 60.601 52.381 0.00 0.00 0.00 2.10
262 263 2.049228 CTGGTGTCGTCGTTGTTCTAC 58.951 52.381 0.00 0.00 0.00 2.59
263 264 1.404748 TGGTGTCGTCGTTGTTCTACA 59.595 47.619 0.00 0.00 0.00 2.74
275 276 0.802494 GTTCTACAACACCATGGCGG 59.198 55.000 13.04 7.11 42.50 6.13
277 278 2.360600 TACAACACCATGGCGGCC 60.361 61.111 13.04 13.32 39.03 6.13
328 329 2.747446 ACGAGAACAGAGAAGAGAGAGC 59.253 50.000 0.00 0.00 0.00 4.09
330 331 1.472480 AGAACAGAGAAGAGAGAGCGC 59.528 52.381 0.00 0.00 0.00 5.92
332 333 1.586042 CAGAGAAGAGAGAGCGCGC 60.586 63.158 26.66 26.66 0.00 6.86
334 335 4.845705 AGAAGAGAGAGCGCGCGC 62.846 66.667 45.10 45.10 42.33 6.86
354 355 1.869754 CGCGAGAGAGAGAGAGAGAGG 60.870 61.905 0.00 0.00 0.00 3.69
355 356 1.541233 GCGAGAGAGAGAGAGAGAGGG 60.541 61.905 0.00 0.00 0.00 4.30
387 415 2.595386 GTCATTTTGACCAACCGATGC 58.405 47.619 0.00 0.00 41.37 3.91
391 419 0.958091 TTTGACCAACCGATGCCAAG 59.042 50.000 0.00 0.00 0.00 3.61
411 439 2.904866 GCACCGTCAACCAAGCCA 60.905 61.111 0.00 0.00 0.00 4.75
421 449 1.468520 CAACCAAGCCATTAGTCCACG 59.531 52.381 0.00 0.00 0.00 4.94
462 511 5.086058 CGGTGATTTTTCAACGGATTACTG 58.914 41.667 5.55 0.00 45.97 2.74
471 520 3.446161 TCAACGGATTACTGACTAGGTGG 59.554 47.826 0.00 0.00 0.00 4.61
473 522 4.240881 ACGGATTACTGACTAGGTGGTA 57.759 45.455 0.00 0.00 0.00 3.25
485 534 3.587506 ACTAGGTGGTATTCTGCAAACCT 59.412 43.478 8.23 0.00 40.95 3.50
489 538 3.343617 GTGGTATTCTGCAAACCTAGCA 58.656 45.455 8.23 0.00 40.19 3.49
490 539 3.947834 GTGGTATTCTGCAAACCTAGCAT 59.052 43.478 8.23 0.00 41.82 3.79
495 544 7.141363 GGTATTCTGCAAACCTAGCATAAATG 58.859 38.462 0.00 0.00 41.82 2.32
497 546 5.565592 TCTGCAAACCTAGCATAAATGTG 57.434 39.130 0.00 0.00 41.82 3.21
504 553 7.576856 GCAAACCTAGCATAAATGTGGTAGTTT 60.577 37.037 13.10 10.85 44.60 2.66
506 555 8.417273 AACCTAGCATAAATGTGGTAGTTTTT 57.583 30.769 13.10 3.76 44.60 1.94
537 586 2.582052 TCGGTTCAAGGCAATGAAAGT 58.418 42.857 7.23 0.00 40.76 2.66
553 602 7.876936 AATGAAAGTGTCAGCTCATTGATAT 57.123 32.000 4.08 0.00 40.43 1.63
605 863 1.973812 GGAAGCTGTTGGAGGTGCC 60.974 63.158 0.00 0.00 40.94 5.01
750 1012 2.672714 GACATTGAGTCACAGTGCGTA 58.327 47.619 0.00 0.00 46.77 4.42
799 1066 3.403624 TGGCCTGACCATCAGTCC 58.596 61.111 3.32 2.13 46.36 3.85
800 1067 3.403624 GGCCTGACCATCAGTCCA 58.596 61.111 0.00 0.00 41.86 4.02
801 1068 0.915872 TGGCCTGACCATCAGTCCAT 60.916 55.000 3.32 0.00 46.37 3.41
802 1069 0.179034 GGCCTGACCATCAGTCCATC 60.179 60.000 0.00 0.00 41.86 3.51
803 1070 0.543277 GCCTGACCATCAGTCCATCA 59.457 55.000 5.18 0.00 45.68 3.07
808 1075 2.577563 TGACCATCAGTCCATCACCAAT 59.422 45.455 0.00 0.00 45.68 3.16
821 1088 4.281688 CCATCACCAATTCCAAACAGAACT 59.718 41.667 0.00 0.00 0.00 3.01
868 1135 1.354368 CCACCAACCTAATCACACCCT 59.646 52.381 0.00 0.00 0.00 4.34
870 1137 2.062636 ACCAACCTAATCACACCCTGT 58.937 47.619 0.00 0.00 0.00 4.00
873 1140 3.081804 CAACCTAATCACACCCTGTTCC 58.918 50.000 0.00 0.00 0.00 3.62
875 1142 1.633432 CCTAATCACACCCTGTTCCCA 59.367 52.381 0.00 0.00 0.00 4.37
885 1152 1.325355 CCTGTTCCCATGATCATGCC 58.675 55.000 27.24 15.45 37.49 4.40
903 1177 3.433343 TGCCATCCTGCATAAATATGGG 58.567 45.455 12.20 0.00 38.02 4.00
906 1180 4.665451 CCATCCTGCATAAATATGGGTGA 58.335 43.478 0.90 0.00 34.66 4.02
909 1183 4.469657 TCCTGCATAAATATGGGTGAACC 58.530 43.478 2.82 0.00 40.81 3.62
953 1227 1.093159 GCTGAGAACCAATCCTGCAG 58.907 55.000 6.78 6.78 0.00 4.41
1066 1340 0.975556 TCTCCTTAGCGCCCACATGA 60.976 55.000 2.29 0.00 0.00 3.07
1272 1546 1.448119 CGATCACTCTCCCGCAGCTA 61.448 60.000 0.00 0.00 0.00 3.32
1314 1588 4.457496 CCTGCGATCACCGTGCCT 62.457 66.667 0.00 0.00 41.15 4.75
1316 1590 3.647649 CTGCGATCACCGTGCCTCA 62.648 63.158 0.00 0.00 41.15 3.86
1317 1591 2.887568 GCGATCACCGTGCCTCAG 60.888 66.667 0.00 0.00 41.15 3.35
1318 1592 2.202797 CGATCACCGTGCCTCAGG 60.203 66.667 0.00 0.00 0.00 3.86
1319 1593 2.982130 GATCACCGTGCCTCAGGT 59.018 61.111 0.00 0.00 42.34 4.00
1320 1594 1.153549 GATCACCGTGCCTCAGGTC 60.154 63.158 0.00 0.00 39.00 3.85
1321 1595 1.888436 GATCACCGTGCCTCAGGTCA 61.888 60.000 0.00 0.00 39.00 4.02
1322 1596 2.172483 ATCACCGTGCCTCAGGTCAC 62.172 60.000 7.92 7.92 39.00 3.67
1323 1597 2.524394 ACCGTGCCTCAGGTCACT 60.524 61.111 14.13 0.00 35.50 3.41
1324 1598 2.140792 ACCGTGCCTCAGGTCACTT 61.141 57.895 14.13 1.58 35.50 3.16
1325 1599 1.071471 CCGTGCCTCAGGTCACTTT 59.929 57.895 14.13 0.00 31.19 2.66
1326 1600 1.230635 CCGTGCCTCAGGTCACTTTG 61.231 60.000 14.13 2.14 31.19 2.77
1327 1601 1.845809 CGTGCCTCAGGTCACTTTGC 61.846 60.000 14.13 0.00 31.19 3.68
1328 1602 1.228245 TGCCTCAGGTCACTTTGCC 60.228 57.895 0.00 0.00 0.00 4.52
1329 1603 2.328099 GCCTCAGGTCACTTTGCCG 61.328 63.158 0.00 0.00 0.00 5.69
1330 1604 2.328099 CCTCAGGTCACTTTGCCGC 61.328 63.158 0.00 0.00 0.00 6.53
1331 1605 2.281484 TCAGGTCACTTTGCCGCC 60.281 61.111 0.00 0.00 0.00 6.13
1332 1606 3.365265 CAGGTCACTTTGCCGCCC 61.365 66.667 0.00 0.00 0.00 6.13
1333 1607 3.884774 AGGTCACTTTGCCGCCCA 61.885 61.111 0.00 0.00 0.00 5.36
1334 1608 2.676471 GGTCACTTTGCCGCCCAT 60.676 61.111 0.00 0.00 0.00 4.00
1335 1609 2.568090 GTCACTTTGCCGCCCATG 59.432 61.111 0.00 0.00 0.00 3.66
1336 1610 3.372730 TCACTTTGCCGCCCATGC 61.373 61.111 0.00 0.00 0.00 4.06
1337 1611 4.440127 CACTTTGCCGCCCATGCC 62.440 66.667 0.00 0.00 0.00 4.40
1505 1827 0.253820 ATCTCCATCCCCAAGGTGGT 60.254 55.000 0.00 0.00 35.17 4.16
1522 1844 0.886490 GGTATTGCCTCCGATGCCTG 60.886 60.000 0.00 0.00 35.40 4.85
1524 1846 1.981951 TATTGCCTCCGATGCCTGCA 61.982 55.000 0.00 0.00 0.00 4.41
1525 1847 2.635787 ATTGCCTCCGATGCCTGCAT 62.636 55.000 3.90 3.90 39.69 3.96
1571 1893 2.282462 CCTTGCGCCACCTCCTTT 60.282 61.111 4.18 0.00 0.00 3.11
1572 1894 2.629656 CCTTGCGCCACCTCCTTTG 61.630 63.158 4.18 0.00 0.00 2.77
1596 1918 2.280797 GCACGAACCAGAGCACCA 60.281 61.111 0.00 0.00 0.00 4.17
1613 1935 1.051812 CCAGGAGCGGGAATCTACAT 58.948 55.000 0.00 0.00 0.00 2.29
1615 1937 2.158755 CCAGGAGCGGGAATCTACATTT 60.159 50.000 0.00 0.00 0.00 2.32
1617 1939 2.104963 AGGAGCGGGAATCTACATTTCC 59.895 50.000 0.00 0.00 41.64 3.13
1627 1967 7.713507 CGGGAATCTACATTTCCATGTTTACTA 59.286 37.037 4.96 0.00 41.16 1.82
1637 1977 7.461182 TTTCCATGTTTACTAGACCATTTGG 57.539 36.000 0.00 0.00 42.17 3.28
1656 1996 1.614413 GGTTTTGGCCATTCACCGTTA 59.386 47.619 6.09 0.00 0.00 3.18
1661 2001 1.654023 GGCCATTCACCGTTAGCCAC 61.654 60.000 0.00 0.00 40.20 5.01
1674 2014 4.696402 CCGTTAGCCACCTTGTTTACATTA 59.304 41.667 0.00 0.00 0.00 1.90
1677 2017 6.128117 CGTTAGCCACCTTGTTTACATTATGT 60.128 38.462 2.58 2.58 0.00 2.29
1700 2058 5.977129 GTGGTTCCTATTTTCTTTGTGTGTG 59.023 40.000 0.00 0.00 0.00 3.82
1718 2076 6.262720 TGTGTGTGTGTGTAGTATGTAGTACA 59.737 38.462 5.24 5.24 39.18 2.90
1719 2077 6.800408 GTGTGTGTGTGTAGTATGTAGTACAG 59.200 42.308 9.25 0.00 41.35 2.74
1743 2101 1.818555 GGCTTGTCAATGGCCATCC 59.181 57.895 21.08 10.36 44.69 3.51
1763 2121 7.310052 GCCATCCCTTTTTCTTTCTCTTTGTAT 60.310 37.037 0.00 0.00 0.00 2.29
1825 2184 8.830580 ACATTTATGTCAGACATACTGTTATGC 58.169 33.333 20.98 0.00 45.86 3.14
1827 2186 8.785329 TTTATGTCAGACATACTGTTATGCAA 57.215 30.769 20.98 8.25 45.86 4.08
1831 2190 8.196802 TGTCAGACATACTGTTATGCAATTAC 57.803 34.615 0.00 0.00 45.86 1.89
1838 2197 7.336679 ACATACTGTTATGCAATTACTGAGCAA 59.663 33.333 0.00 0.00 42.15 3.91
1841 2200 8.279970 ACTGTTATGCAATTACTGAGCAATAA 57.720 30.769 0.00 0.00 42.15 1.40
1842 2201 8.906867 ACTGTTATGCAATTACTGAGCAATAAT 58.093 29.630 0.00 0.00 42.15 1.28
1843 2202 9.740239 CTGTTATGCAATTACTGAGCAATAATT 57.260 29.630 0.00 0.00 42.15 1.40
1846 2205 6.435430 TGCAATTACTGAGCAATAATTCGT 57.565 33.333 0.00 0.00 34.97 3.85
1854 2213 3.688673 TGAGCAATAATTCGTCATGTGCA 59.311 39.130 0.00 0.00 32.98 4.57
1855 2214 4.336153 TGAGCAATAATTCGTCATGTGCAT 59.664 37.500 0.00 0.00 32.98 3.96
1876 2235 5.105997 GCATTCTAACTCCAACAAATCTGCT 60.106 40.000 0.00 0.00 0.00 4.24
1886 2245 4.980434 CCAACAAATCTGCTTTCTGACAAG 59.020 41.667 0.00 0.00 0.00 3.16
1889 2248 6.305693 ACAAATCTGCTTTCTGACAAGTAC 57.694 37.500 0.00 0.00 0.00 2.73
1890 2249 6.058183 ACAAATCTGCTTTCTGACAAGTACT 58.942 36.000 0.00 0.00 0.00 2.73
1892 2251 4.258702 TCTGCTTTCTGACAAGTACTCC 57.741 45.455 0.00 0.00 0.00 3.85
1893 2252 3.006967 TCTGCTTTCTGACAAGTACTCCC 59.993 47.826 0.00 0.00 0.00 4.30
1895 2254 3.006967 TGCTTTCTGACAAGTACTCCCTC 59.993 47.826 0.00 0.00 0.00 4.30
1896 2255 3.617775 GCTTTCTGACAAGTACTCCCTCC 60.618 52.174 0.00 0.00 0.00 4.30
1897 2256 1.835494 TCTGACAAGTACTCCCTCCG 58.165 55.000 0.00 0.00 0.00 4.63
1898 2257 1.075050 TCTGACAAGTACTCCCTCCGT 59.925 52.381 0.00 0.00 0.00 4.69
1899 2258 1.893801 CTGACAAGTACTCCCTCCGTT 59.106 52.381 0.00 0.00 0.00 4.44
1901 2260 0.886563 ACAAGTACTCCCTCCGTTCG 59.113 55.000 0.00 0.00 0.00 3.95
1907 2266 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
1908 2267 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1911 2270 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
1913 2272 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
1914 2273 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
1915 2274 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
1917 2276 2.222508 CGTTCGGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
1918 2277 2.991190 GTTCGGAATTACTTGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
1919 2278 3.306917 TCGGAATTACTTGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
1922 2281 5.412640 TCGGAATTACTTGTCGCAGAAATA 58.587 37.500 0.00 0.00 39.69 1.40
1923 2282 5.518847 TCGGAATTACTTGTCGCAGAAATAG 59.481 40.000 0.00 0.00 39.69 1.73
1924 2283 5.518847 CGGAATTACTTGTCGCAGAAATAGA 59.481 40.000 0.00 0.00 39.69 1.98
1926 2285 7.348201 GGAATTACTTGTCGCAGAAATAGATG 58.652 38.462 0.00 0.00 39.69 2.90
1927 2286 7.011482 GGAATTACTTGTCGCAGAAATAGATGT 59.989 37.037 0.00 0.00 39.69 3.06
1928 2287 8.942338 AATTACTTGTCGCAGAAATAGATGTA 57.058 30.769 0.00 0.00 39.69 2.29
1930 2289 8.575565 TTACTTGTCGCAGAAATAGATGTATC 57.424 34.615 0.00 0.00 39.69 2.24
1933 2292 8.079203 ACTTGTCGCAGAAATAGATGTATCTAG 58.921 37.037 7.57 0.00 39.84 2.43
1934 2293 7.745620 TGTCGCAGAAATAGATGTATCTAGA 57.254 36.000 7.57 0.00 39.84 2.43
1936 2295 7.228706 TGTCGCAGAAATAGATGTATCTAGACA 59.771 37.037 0.00 9.57 39.84 3.41
1937 2296 8.240682 GTCGCAGAAATAGATGTATCTAGACAT 58.759 37.037 0.00 0.00 39.84 3.06
1938 2297 9.449719 TCGCAGAAATAGATGTATCTAGACATA 57.550 33.333 0.00 0.00 42.20 2.29
1951 2310 8.090831 TGTATCTAGACATACATCCATTTCTGC 58.909 37.037 0.00 0.00 34.85 4.26
1952 2311 5.532557 TCTAGACATACATCCATTTCTGCG 58.467 41.667 0.00 0.00 0.00 5.18
1953 2312 4.406648 AGACATACATCCATTTCTGCGA 57.593 40.909 0.00 0.00 0.00 5.10
1954 2313 4.122776 AGACATACATCCATTTCTGCGAC 58.877 43.478 0.00 0.00 0.00 5.19
1955 2314 3.871006 GACATACATCCATTTCTGCGACA 59.129 43.478 0.00 0.00 0.00 4.35
1956 2315 4.260985 ACATACATCCATTTCTGCGACAA 58.739 39.130 0.00 0.00 0.00 3.18
1957 2316 4.333649 ACATACATCCATTTCTGCGACAAG 59.666 41.667 0.00 0.00 0.00 3.16
1958 2317 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
1959 2318 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
1961 2320 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
1962 2321 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
1963 2322 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
1964 2323 4.394920 TCCATTTCTGCGACAAGTAATTCC 59.605 41.667 0.00 0.00 0.00 3.01
1965 2324 4.334443 CATTTCTGCGACAAGTAATTCCG 58.666 43.478 0.00 0.00 0.00 4.30
1966 2325 3.306917 TTCTGCGACAAGTAATTCCGA 57.693 42.857 0.00 0.00 0.00 4.55
1967 2326 3.306917 TCTGCGACAAGTAATTCCGAA 57.693 42.857 0.00 0.00 0.00 4.30
1968 2327 2.991190 TCTGCGACAAGTAATTCCGAAC 59.009 45.455 0.00 0.00 0.00 3.95
1971 2330 2.991190 GCGACAAGTAATTCCGAACTGA 59.009 45.455 0.00 0.00 0.00 3.41
1972 2331 3.060895 GCGACAAGTAATTCCGAACTGAG 59.939 47.826 0.00 0.00 0.00 3.35
1976 2552 4.184629 CAAGTAATTCCGAACTGAGGGAG 58.815 47.826 0.00 0.00 33.01 4.30
1980 2556 6.371278 AGTAATTCCGAACTGAGGGAGTATA 58.629 40.000 0.00 0.00 33.09 1.47
1981 2557 6.837568 AGTAATTCCGAACTGAGGGAGTATAA 59.162 38.462 0.00 0.00 33.09 0.98
1982 2558 5.793030 ATTCCGAACTGAGGGAGTATAAG 57.207 43.478 0.00 0.00 33.09 1.73
1990 2566 4.777896 ACTGAGGGAGTATAAGTTTGAGCA 59.222 41.667 0.00 0.00 30.86 4.26
1991 2567 5.248477 ACTGAGGGAGTATAAGTTTGAGCAA 59.752 40.000 0.00 0.00 30.86 3.91
1993 2569 6.349300 TGAGGGAGTATAAGTTTGAGCAATC 58.651 40.000 0.00 0.00 0.00 2.67
1996 2572 6.599638 AGGGAGTATAAGTTTGAGCAATCAAC 59.400 38.462 0.00 0.00 0.00 3.18
2012 2588 5.455525 GCAATCAACAGTTGAACACAAGTAC 59.544 40.000 19.92 0.00 43.95 2.73
2013 2589 6.677920 GCAATCAACAGTTGAACACAAGTACT 60.678 38.462 19.92 0.00 43.95 2.73
2014 2590 7.250569 CAATCAACAGTTGAACACAAGTACTT 58.749 34.615 19.92 1.12 43.95 2.24
2015 2591 6.417191 TCAACAGTTGAACACAAGTACTTC 57.583 37.500 13.90 0.00 36.59 3.01
2016 2592 5.353123 TCAACAGTTGAACACAAGTACTTCC 59.647 40.000 13.90 0.00 36.59 3.46
2017 2593 5.099042 ACAGTTGAACACAAGTACTTCCT 57.901 39.130 4.77 0.00 0.00 3.36
2019 2595 4.511826 CAGTTGAACACAAGTACTTCCTCC 59.488 45.833 4.77 0.00 0.00 4.30
2020 2596 3.380479 TGAACACAAGTACTTCCTCCG 57.620 47.619 4.77 0.00 0.00 4.63
2021 2597 2.696707 TGAACACAAGTACTTCCTCCGT 59.303 45.455 4.77 0.00 0.00 4.69
2022 2598 3.133362 TGAACACAAGTACTTCCTCCGTT 59.867 43.478 4.77 4.92 0.00 4.44
2023 2599 3.382048 ACACAAGTACTTCCTCCGTTC 57.618 47.619 4.77 0.00 0.00 3.95
2024 2600 2.696707 ACACAAGTACTTCCTCCGTTCA 59.303 45.455 4.77 0.00 0.00 3.18
2025 2601 3.323979 ACACAAGTACTTCCTCCGTTCAT 59.676 43.478 4.77 0.00 0.00 2.57
2026 2602 4.525487 ACACAAGTACTTCCTCCGTTCATA 59.475 41.667 4.77 0.00 0.00 2.15
2027 2603 5.011329 ACACAAGTACTTCCTCCGTTCATAA 59.989 40.000 4.77 0.00 0.00 1.90
2028 2604 5.929992 CACAAGTACTTCCTCCGTTCATAAA 59.070 40.000 4.77 0.00 0.00 1.40
2029 2605 5.930569 ACAAGTACTTCCTCCGTTCATAAAC 59.069 40.000 4.77 0.00 0.00 2.01
2030 2606 5.733620 AGTACTTCCTCCGTTCATAAACA 57.266 39.130 0.00 0.00 34.93 2.83
2031 2607 6.295719 AGTACTTCCTCCGTTCATAAACAT 57.704 37.500 0.00 0.00 34.93 2.71
2032 2608 7.414222 AGTACTTCCTCCGTTCATAAACATA 57.586 36.000 0.00 0.00 34.93 2.29
2033 2609 7.844009 AGTACTTCCTCCGTTCATAAACATAA 58.156 34.615 0.00 0.00 34.93 1.90
2034 2610 7.980099 AGTACTTCCTCCGTTCATAAACATAAG 59.020 37.037 0.00 0.00 34.93 1.73
2035 2611 6.942976 ACTTCCTCCGTTCATAAACATAAGA 58.057 36.000 0.00 0.00 34.93 2.10
2036 2612 7.565680 ACTTCCTCCGTTCATAAACATAAGAT 58.434 34.615 0.00 0.00 34.93 2.40
2037 2613 7.495934 ACTTCCTCCGTTCATAAACATAAGATG 59.504 37.037 0.00 0.00 34.93 2.90
2065 2641 9.958180 TTTTGAGATTTCAATATGGACTACAGA 57.042 29.630 0.00 0.00 42.60 3.41
2066 2642 8.948631 TTGAGATTTCAATATGGACTACAGAC 57.051 34.615 0.00 0.00 38.37 3.51
2067 2643 8.078060 TGAGATTTCAATATGGACTACAGACA 57.922 34.615 0.00 0.00 0.00 3.41
2068 2644 8.200120 TGAGATTTCAATATGGACTACAGACAG 58.800 37.037 0.00 0.00 0.00 3.51
2069 2645 7.504403 AGATTTCAATATGGACTACAGACAGG 58.496 38.462 0.00 0.00 0.00 4.00
2070 2646 4.672587 TCAATATGGACTACAGACAGGC 57.327 45.455 0.00 0.00 0.00 4.85
2071 2647 4.290093 TCAATATGGACTACAGACAGGCT 58.710 43.478 0.00 0.00 0.00 4.58
2083 2659 3.051081 AGACAGGCTGAAATGAGTGAC 57.949 47.619 23.66 0.00 0.00 3.67
2084 2660 2.079925 GACAGGCTGAAATGAGTGACC 58.920 52.381 23.66 0.00 0.00 4.02
2085 2661 1.421268 ACAGGCTGAAATGAGTGACCA 59.579 47.619 23.66 0.00 0.00 4.02
2086 2662 2.158623 ACAGGCTGAAATGAGTGACCAA 60.159 45.455 23.66 0.00 0.00 3.67
2087 2663 2.886523 CAGGCTGAAATGAGTGACCAAA 59.113 45.455 9.42 0.00 0.00 3.28
2088 2664 2.887152 AGGCTGAAATGAGTGACCAAAC 59.113 45.455 0.00 0.00 0.00 2.93
2089 2665 2.622942 GGCTGAAATGAGTGACCAAACA 59.377 45.455 0.00 0.00 0.00 2.83
2090 2666 3.550842 GGCTGAAATGAGTGACCAAACAC 60.551 47.826 0.00 0.00 40.60 3.32
2091 2667 3.066621 GCTGAAATGAGTGACCAAACACA 59.933 43.478 0.00 0.00 42.45 3.72
2092 2668 4.601019 CTGAAATGAGTGACCAAACACAC 58.399 43.478 0.00 0.00 42.45 3.82
2094 2670 5.432645 TGAAATGAGTGACCAAACACACTA 58.567 37.500 0.00 0.00 45.54 2.74
2095 2671 5.883115 TGAAATGAGTGACCAAACACACTAA 59.117 36.000 0.00 0.00 45.54 2.24
2096 2672 6.375736 TGAAATGAGTGACCAAACACACTAAA 59.624 34.615 0.00 0.00 45.54 1.85
2097 2673 6.767524 AATGAGTGACCAAACACACTAAAA 57.232 33.333 0.00 0.00 45.54 1.52
2098 2674 5.554822 TGAGTGACCAAACACACTAAAAC 57.445 39.130 0.00 0.00 45.54 2.43
2099 2675 4.093703 TGAGTGACCAAACACACTAAAACG 59.906 41.667 0.00 0.00 45.54 3.60
2100 2676 4.004982 AGTGACCAAACACACTAAAACGT 58.995 39.130 0.00 0.00 44.06 3.99
2101 2677 4.092816 GTGACCAAACACACTAAAACGTG 58.907 43.478 0.00 0.00 40.11 4.49
2103 2679 4.142859 TGACCAAACACACTAAAACGTGTC 60.143 41.667 0.00 0.00 45.74 3.67
2104 2680 4.004982 ACCAAACACACTAAAACGTGTCT 58.995 39.130 0.00 0.00 45.74 3.41
2105 2681 5.177326 ACCAAACACACTAAAACGTGTCTA 58.823 37.500 0.00 0.00 45.74 2.59
2106 2682 5.818857 ACCAAACACACTAAAACGTGTCTAT 59.181 36.000 0.00 0.00 45.74 1.98
2107 2683 6.985645 ACCAAACACACTAAAACGTGTCTATA 59.014 34.615 0.00 0.00 45.74 1.31
2108 2684 7.658575 ACCAAACACACTAAAACGTGTCTATAT 59.341 33.333 0.00 0.00 45.74 0.86
2109 2685 9.142515 CCAAACACACTAAAACGTGTCTATATA 57.857 33.333 0.00 0.00 45.74 0.86
2110 2686 9.947897 CAAACACACTAAAACGTGTCTATATAC 57.052 33.333 0.00 0.00 45.74 1.47
2111 2687 9.695526 AAACACACTAAAACGTGTCTATATACA 57.304 29.630 0.00 0.00 45.74 2.29
2112 2688 9.865321 AACACACTAAAACGTGTCTATATACAT 57.135 29.630 0.00 0.00 45.74 2.29
2113 2689 9.512435 ACACACTAAAACGTGTCTATATACATC 57.488 33.333 0.00 0.00 45.74 3.06
2114 2690 8.965172 CACACTAAAACGTGTCTATATACATCC 58.035 37.037 0.00 0.00 45.74 3.51
2115 2691 8.689061 ACACTAAAACGTGTCTATATACATCCA 58.311 33.333 0.00 0.00 44.32 3.41
2116 2692 9.524106 CACTAAAACGTGTCTATATACATCCAA 57.476 33.333 0.00 0.00 0.00 3.53
2117 2693 9.525409 ACTAAAACGTGTCTATATACATCCAAC 57.475 33.333 0.00 0.00 0.00 3.77
2118 2694 9.745880 CTAAAACGTGTCTATATACATCCAACT 57.254 33.333 0.00 0.00 0.00 3.16
2119 2695 8.644318 AAAACGTGTCTATATACATCCAACTC 57.356 34.615 0.00 0.00 0.00 3.01
2120 2696 6.954487 ACGTGTCTATATACATCCAACTCA 57.046 37.500 0.00 0.00 0.00 3.41
2121 2697 6.971602 ACGTGTCTATATACATCCAACTCAG 58.028 40.000 0.00 0.00 0.00 3.35
2122 2698 6.771267 ACGTGTCTATATACATCCAACTCAGA 59.229 38.462 0.00 0.00 0.00 3.27
2123 2699 7.284716 ACGTGTCTATATACATCCAACTCAGAA 59.715 37.037 0.00 0.00 0.00 3.02
2124 2700 8.135529 CGTGTCTATATACATCCAACTCAGAAA 58.864 37.037 0.00 0.00 0.00 2.52
2125 2701 9.817809 GTGTCTATATACATCCAACTCAGAAAA 57.182 33.333 0.00 0.00 0.00 2.29
2175 2751 6.458232 ACAAAGGAGTACATAGCTAGACTG 57.542 41.667 9.75 1.39 0.00 3.51
2189 2767 4.469227 AGCTAGACTGGACATCTTTGACAT 59.531 41.667 0.00 0.00 0.00 3.06
2190 2768 5.658634 AGCTAGACTGGACATCTTTGACATA 59.341 40.000 0.00 0.00 0.00 2.29
2191 2769 5.751028 GCTAGACTGGACATCTTTGACATAC 59.249 44.000 0.00 0.00 0.00 2.39
2192 2770 6.406400 GCTAGACTGGACATCTTTGACATACT 60.406 42.308 0.00 0.00 0.00 2.12
2193 2771 7.201830 GCTAGACTGGACATCTTTGACATACTA 60.202 40.741 0.00 0.00 0.00 1.82
2194 2772 6.868622 AGACTGGACATCTTTGACATACTAC 58.131 40.000 0.00 0.00 0.00 2.73
2195 2773 5.978814 ACTGGACATCTTTGACATACTACC 58.021 41.667 0.00 0.00 0.00 3.18
2196 2774 5.721960 ACTGGACATCTTTGACATACTACCT 59.278 40.000 0.00 0.00 0.00 3.08
2197 2775 6.127310 ACTGGACATCTTTGACATACTACCTC 60.127 42.308 0.00 0.00 0.00 3.85
2198 2776 5.128827 TGGACATCTTTGACATACTACCTCC 59.871 44.000 0.00 0.00 0.00 4.30
2199 2777 5.263968 ACATCTTTGACATACTACCTCCG 57.736 43.478 0.00 0.00 0.00 4.63
2200 2778 4.710375 ACATCTTTGACATACTACCTCCGT 59.290 41.667 0.00 0.00 0.00 4.69
2201 2779 5.187186 ACATCTTTGACATACTACCTCCGTT 59.813 40.000 0.00 0.00 0.00 4.44
2202 2780 5.320549 TCTTTGACATACTACCTCCGTTC 57.679 43.478 0.00 0.00 0.00 3.95
2203 2781 4.159135 TCTTTGACATACTACCTCCGTTCC 59.841 45.833 0.00 0.00 0.00 3.62
2204 2782 3.090210 TGACATACTACCTCCGTTCCA 57.910 47.619 0.00 0.00 0.00 3.53
2205 2783 3.433343 TGACATACTACCTCCGTTCCAA 58.567 45.455 0.00 0.00 0.00 3.53
2206 2784 3.833650 TGACATACTACCTCCGTTCCAAA 59.166 43.478 0.00 0.00 0.00 3.28
2207 2785 4.468510 TGACATACTACCTCCGTTCCAAAT 59.531 41.667 0.00 0.00 0.00 2.32
2208 2786 5.046159 TGACATACTACCTCCGTTCCAAATT 60.046 40.000 0.00 0.00 0.00 1.82
2209 2787 6.154877 TGACATACTACCTCCGTTCCAAATTA 59.845 38.462 0.00 0.00 0.00 1.40
2210 2788 6.343703 ACATACTACCTCCGTTCCAAATTAC 58.656 40.000 0.00 0.00 0.00 1.89
2211 2789 6.155737 ACATACTACCTCCGTTCCAAATTACT 59.844 38.462 0.00 0.00 0.00 2.24
2212 2790 5.082251 ACTACCTCCGTTCCAAATTACTC 57.918 43.478 0.00 0.00 0.00 2.59
2213 2791 4.776308 ACTACCTCCGTTCCAAATTACTCT 59.224 41.667 0.00 0.00 0.00 3.24
2214 2792 3.939066 ACCTCCGTTCCAAATTACTCTG 58.061 45.455 0.00 0.00 0.00 3.35
2215 2793 3.326880 ACCTCCGTTCCAAATTACTCTGT 59.673 43.478 0.00 0.00 0.00 3.41
2216 2794 3.933332 CCTCCGTTCCAAATTACTCTGTC 59.067 47.826 0.00 0.00 0.00 3.51
2217 2795 3.581755 TCCGTTCCAAATTACTCTGTCG 58.418 45.455 0.00 0.00 0.00 4.35
2218 2796 2.093783 CCGTTCCAAATTACTCTGTCGC 59.906 50.000 0.00 0.00 0.00 5.19
2219 2797 2.993899 CGTTCCAAATTACTCTGTCGCT 59.006 45.455 0.00 0.00 0.00 4.93
2220 2798 3.181530 CGTTCCAAATTACTCTGTCGCTG 60.182 47.826 0.00 0.00 0.00 5.18
2221 2799 3.953712 TCCAAATTACTCTGTCGCTGA 57.046 42.857 0.00 0.00 0.00 4.26
2222 2800 4.265904 TCCAAATTACTCTGTCGCTGAA 57.734 40.909 0.00 0.00 0.00 3.02
2223 2801 4.637276 TCCAAATTACTCTGTCGCTGAAA 58.363 39.130 0.00 0.00 0.00 2.69
2224 2802 5.245531 TCCAAATTACTCTGTCGCTGAAAT 58.754 37.500 0.00 0.00 0.00 2.17
2225 2803 5.122239 TCCAAATTACTCTGTCGCTGAAATG 59.878 40.000 0.00 0.00 0.00 2.32
2226 2804 5.327091 CAAATTACTCTGTCGCTGAAATGG 58.673 41.667 0.00 0.00 0.00 3.16
2227 2805 3.953712 TTACTCTGTCGCTGAAATGGA 57.046 42.857 0.00 0.00 0.00 3.41
2228 2806 4.471904 TTACTCTGTCGCTGAAATGGAT 57.528 40.909 0.00 0.00 0.00 3.41
2229 2807 2.625737 ACTCTGTCGCTGAAATGGATG 58.374 47.619 0.00 0.00 0.00 3.51
2230 2808 2.027745 ACTCTGTCGCTGAAATGGATGT 60.028 45.455 0.00 0.00 0.00 3.06
2231 2809 3.195610 ACTCTGTCGCTGAAATGGATGTA 59.804 43.478 0.00 0.00 0.00 2.29
2232 2810 4.141846 ACTCTGTCGCTGAAATGGATGTAT 60.142 41.667 0.00 0.00 0.00 2.29
2233 2811 4.371786 TCTGTCGCTGAAATGGATGTATC 58.628 43.478 0.00 0.00 0.00 2.24
2234 2812 4.100035 TCTGTCGCTGAAATGGATGTATCT 59.900 41.667 0.00 0.00 0.00 1.98
2235 2813 5.301805 TCTGTCGCTGAAATGGATGTATCTA 59.698 40.000 0.00 0.00 0.00 1.98
2236 2814 5.532557 TGTCGCTGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 0.00 2.43
2237 2815 5.301805 TGTCGCTGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 0.00 2.43
2238 2816 6.183360 TGTCGCTGAAATGGATGTATCTAGAA 60.183 38.462 0.00 0.00 0.00 2.10
2239 2817 6.144724 GTCGCTGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 0.00 3.01
2240 2818 6.040955 TCGCTGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
2241 2819 7.230712 TCGCTGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
2242 2820 7.867909 CGCTGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
2243 2821 9.547753 GCTGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
2269 2847 5.955488 ACATCTAGATACATCCATACGTGC 58.045 41.667 4.54 0.00 0.00 5.34
2270 2848 4.680171 TCTAGATACATCCATACGTGCG 57.320 45.455 0.00 0.00 0.00 5.34
2271 2849 4.320870 TCTAGATACATCCATACGTGCGA 58.679 43.478 0.00 0.00 0.00 5.10
2272 2850 3.284323 AGATACATCCATACGTGCGAC 57.716 47.619 0.00 0.00 0.00 5.19
2273 2851 2.621526 AGATACATCCATACGTGCGACA 59.378 45.455 0.00 0.00 0.00 4.35
2274 2852 2.943449 TACATCCATACGTGCGACAA 57.057 45.000 0.00 0.00 0.00 3.18
2275 2853 1.640428 ACATCCATACGTGCGACAAG 58.360 50.000 0.00 0.00 0.00 3.16
2276 2854 1.067142 ACATCCATACGTGCGACAAGT 60.067 47.619 0.00 0.00 0.00 3.16
2277 2855 2.164827 ACATCCATACGTGCGACAAGTA 59.835 45.455 0.00 7.72 33.49 2.24
2278 2856 3.183754 CATCCATACGTGCGACAAGTAA 58.816 45.455 0.00 0.00 32.82 2.24
2279 2857 3.513680 TCCATACGTGCGACAAGTAAT 57.486 42.857 0.00 0.00 32.82 1.89
2280 2858 3.852286 TCCATACGTGCGACAAGTAATT 58.148 40.909 0.00 0.00 32.82 1.40
2281 2859 3.861113 TCCATACGTGCGACAAGTAATTC 59.139 43.478 0.00 0.00 32.82 2.17
2282 2860 3.301579 CCATACGTGCGACAAGTAATTCG 60.302 47.826 0.00 0.00 32.82 3.34
2283 2861 1.065358 ACGTGCGACAAGTAATTCGG 58.935 50.000 0.00 0.00 35.73 4.30
2284 2862 1.336148 ACGTGCGACAAGTAATTCGGA 60.336 47.619 0.00 0.00 35.73 4.55
2285 2863 1.722464 CGTGCGACAAGTAATTCGGAA 59.278 47.619 0.00 0.00 37.32 4.30
2286 2864 2.471749 CGTGCGACAAGTAATTCGGAAC 60.472 50.000 0.00 0.00 37.32 3.62
2323 2901 8.567104 CATTTATACATTCAAATCGTCCATCCA 58.433 33.333 0.00 0.00 0.00 3.41
2335 2913 2.614057 CGTCCATCCAAAGAGCATTACC 59.386 50.000 0.00 0.00 0.00 2.85
2338 2916 2.016318 CATCCAAAGAGCATTACCGCA 58.984 47.619 0.00 0.00 0.00 5.69
2353 2931 1.505807 CGCAAATGCACGGATCCAA 59.494 52.632 13.41 0.00 42.21 3.53
2359 2937 1.453155 ATGCACGGATCCAACTTCAC 58.547 50.000 13.41 0.00 0.00 3.18
2363 2941 3.071479 GCACGGATCCAACTTCACTTTA 58.929 45.455 13.41 0.00 0.00 1.85
2366 2944 3.751698 ACGGATCCAACTTCACTTTAAGC 59.248 43.478 13.41 0.00 0.00 3.09
2367 2945 3.751175 CGGATCCAACTTCACTTTAAGCA 59.249 43.478 13.41 0.00 0.00 3.91
2496 3074 6.455646 CCGAACCGACTTTCTCATTTCTAATG 60.456 42.308 0.00 0.00 0.00 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.597461 GGCGGAGAGGTTAGTTGCT 59.403 57.895 0.00 0.00 0.00 3.91
2 3 1.810030 CGGCGGAGAGGTTAGTTGC 60.810 63.158 0.00 0.00 0.00 4.17
3 4 1.153628 CCGGCGGAGAGGTTAGTTG 60.154 63.158 24.41 0.00 0.00 3.16
4 5 3.015312 GCCGGCGGAGAGGTTAGTT 62.015 63.158 33.44 0.00 0.00 2.24
5 6 3.459063 GCCGGCGGAGAGGTTAGT 61.459 66.667 33.44 0.00 0.00 2.24
6 7 2.630592 GAAGCCGGCGGAGAGGTTAG 62.631 65.000 33.44 0.00 0.00 2.34
7 8 2.682494 AAGCCGGCGGAGAGGTTA 60.682 61.111 33.44 0.00 0.00 2.85
8 9 4.083862 GAAGCCGGCGGAGAGGTT 62.084 66.667 33.44 14.51 0.00 3.50
17 18 4.802051 TGAGCATGGGAAGCCGGC 62.802 66.667 21.89 21.89 0.00 6.13
18 19 2.825836 GTGAGCATGGGAAGCCGG 60.826 66.667 0.00 0.00 0.00 6.13
19 20 2.046023 TGTGAGCATGGGAAGCCG 60.046 61.111 0.00 0.00 0.00 5.52
20 21 0.682209 ATGTGTGAGCATGGGAAGCC 60.682 55.000 0.00 0.00 0.00 4.35
21 22 0.737219 GATGTGTGAGCATGGGAAGC 59.263 55.000 0.00 0.00 0.00 3.86
22 23 1.741706 GTGATGTGTGAGCATGGGAAG 59.258 52.381 0.00 0.00 0.00 3.46
23 24 1.614051 GGTGATGTGTGAGCATGGGAA 60.614 52.381 0.00 0.00 0.00 3.97
24 25 0.035152 GGTGATGTGTGAGCATGGGA 60.035 55.000 0.00 0.00 0.00 4.37
25 26 0.322726 TGGTGATGTGTGAGCATGGG 60.323 55.000 0.00 0.00 0.00 4.00
26 27 1.674441 GATGGTGATGTGTGAGCATGG 59.326 52.381 0.00 0.00 29.72 3.66
27 28 2.096980 GTGATGGTGATGTGTGAGCATG 59.903 50.000 0.00 0.00 29.72 4.06
28 29 2.362736 GTGATGGTGATGTGTGAGCAT 58.637 47.619 0.00 0.00 32.28 3.79
29 30 1.611410 GGTGATGGTGATGTGTGAGCA 60.611 52.381 0.00 0.00 0.00 4.26
30 31 1.089920 GGTGATGGTGATGTGTGAGC 58.910 55.000 0.00 0.00 0.00 4.26
31 32 2.235650 AGAGGTGATGGTGATGTGTGAG 59.764 50.000 0.00 0.00 0.00 3.51
32 33 2.259917 AGAGGTGATGGTGATGTGTGA 58.740 47.619 0.00 0.00 0.00 3.58
33 34 2.775911 AGAGGTGATGGTGATGTGTG 57.224 50.000 0.00 0.00 0.00 3.82
34 35 2.354103 CGAAGAGGTGATGGTGATGTGT 60.354 50.000 0.00 0.00 0.00 3.72
35 36 2.274437 CGAAGAGGTGATGGTGATGTG 58.726 52.381 0.00 0.00 0.00 3.21
36 37 1.406069 GCGAAGAGGTGATGGTGATGT 60.406 52.381 0.00 0.00 0.00 3.06
37 38 1.293924 GCGAAGAGGTGATGGTGATG 58.706 55.000 0.00 0.00 0.00 3.07
38 39 0.179000 GGCGAAGAGGTGATGGTGAT 59.821 55.000 0.00 0.00 0.00 3.06
39 40 1.191489 TGGCGAAGAGGTGATGGTGA 61.191 55.000 0.00 0.00 0.00 4.02
40 41 0.321564 TTGGCGAAGAGGTGATGGTG 60.322 55.000 0.00 0.00 0.00 4.17
41 42 0.321653 GTTGGCGAAGAGGTGATGGT 60.322 55.000 0.00 0.00 0.00 3.55
42 43 0.321564 TGTTGGCGAAGAGGTGATGG 60.322 55.000 0.00 0.00 0.00 3.51
43 44 0.798776 GTGTTGGCGAAGAGGTGATG 59.201 55.000 0.00 0.00 0.00 3.07
44 45 0.321653 GGTGTTGGCGAAGAGGTGAT 60.322 55.000 0.00 0.00 0.00 3.06
45 46 1.070786 GGTGTTGGCGAAGAGGTGA 59.929 57.895 0.00 0.00 0.00 4.02
46 47 1.227823 TGGTGTTGGCGAAGAGGTG 60.228 57.895 0.00 0.00 0.00 4.00
47 48 1.227853 GTGGTGTTGGCGAAGAGGT 60.228 57.895 0.00 0.00 0.00 3.85
48 49 1.227823 TGTGGTGTTGGCGAAGAGG 60.228 57.895 0.00 0.00 0.00 3.69
49 50 0.532862 ACTGTGGTGTTGGCGAAGAG 60.533 55.000 0.00 0.00 0.00 2.85
62 63 2.105821 TCAAGGACCCAAACTACTGTGG 59.894 50.000 0.00 0.00 34.44 4.17
90 91 6.387192 TTCTTTGATTGGTCTAGATCCCAA 57.613 37.500 15.17 15.17 44.40 4.12
149 150 5.529060 TCAATTTGGGGATTTTGTTTTTCCG 59.471 36.000 0.00 0.00 0.00 4.30
165 166 5.047092 AGTGCATTCTAGGGTTTCAATTTGG 60.047 40.000 0.00 0.00 0.00 3.28
171 172 3.559171 GGTCAGTGCATTCTAGGGTTTCA 60.559 47.826 0.00 0.00 0.00 2.69
172 173 3.010420 GGTCAGTGCATTCTAGGGTTTC 58.990 50.000 0.00 0.00 0.00 2.78
183 184 0.952497 CGCTGTCAAGGTCAGTGCAT 60.952 55.000 0.00 0.00 36.79 3.96
202 203 1.040339 ACATCTCCTCCAGCGACTCC 61.040 60.000 0.00 0.00 0.00 3.85
210 211 0.042581 TGCCCAGTACATCTCCTCCA 59.957 55.000 0.00 0.00 0.00 3.86
237 238 2.842256 AACGACGACACCAGCGAGT 61.842 57.895 0.00 0.00 0.00 4.18
242 243 2.049228 GTAGAACAACGACGACACCAG 58.951 52.381 0.00 0.00 0.00 4.00
244 245 2.124011 TGTAGAACAACGACGACACC 57.876 50.000 0.00 0.00 0.00 4.16
254 255 1.876799 CGCCATGGTGTTGTAGAACAA 59.123 47.619 17.59 0.00 43.77 2.83
284 285 0.613260 TATCGCTGACCAGGTTGCTT 59.387 50.000 14.26 6.54 0.00 3.91
290 291 1.299468 GTCGCTATCGCTGACCAGG 60.299 63.158 0.00 0.00 35.29 4.45
293 294 1.369448 CTCGTCGCTATCGCTGACC 60.369 63.158 8.02 0.00 36.80 4.02
306 307 3.181510 GCTCTCTCTTCTCTGTTCTCGTC 60.182 52.174 0.00 0.00 0.00 4.20
309 310 2.477863 GCGCTCTCTCTTCTCTGTTCTC 60.478 54.545 0.00 0.00 0.00 2.87
310 311 1.472480 GCGCTCTCTCTTCTCTGTTCT 59.528 52.381 0.00 0.00 0.00 3.01
311 312 1.793714 CGCGCTCTCTCTTCTCTGTTC 60.794 57.143 5.56 0.00 0.00 3.18
312 313 0.170116 CGCGCTCTCTCTTCTCTGTT 59.830 55.000 5.56 0.00 0.00 3.16
313 314 1.800032 CGCGCTCTCTCTTCTCTGT 59.200 57.895 5.56 0.00 0.00 3.41
314 315 1.586042 GCGCGCTCTCTCTTCTCTG 60.586 63.158 26.67 0.00 0.00 3.35
315 316 2.798009 GCGCGCTCTCTCTTCTCT 59.202 61.111 26.67 0.00 0.00 3.10
316 317 2.650602 CGCGCGCTCTCTCTTCTC 60.651 66.667 30.48 0.00 0.00 2.87
317 318 4.845705 GCGCGCGCTCTCTCTTCT 62.846 66.667 44.38 0.00 38.26 2.85
330 331 4.936248 CTCTCTCTCTCGCGCGCG 62.936 72.222 44.84 44.84 41.35 6.86
332 333 1.821241 CTCTCTCTCTCTCTCGCGCG 61.821 65.000 26.76 26.76 0.00 6.86
334 335 1.491670 CTCTCTCTCTCTCTCTCGCG 58.508 60.000 0.00 0.00 0.00 5.87
336 337 1.070758 CCCCTCTCTCTCTCTCTCTCG 59.929 61.905 0.00 0.00 0.00 4.04
359 387 1.500396 GTCAAAATGACCCGGTCGC 59.500 57.895 13.02 0.00 41.37 5.19
370 398 1.626686 TGGCATCGGTTGGTCAAAAT 58.373 45.000 0.00 0.00 0.00 1.82
387 415 4.025401 GTTGACGGTGCCGCTTGG 62.025 66.667 10.87 0.00 44.19 3.61
391 419 4.025401 CTTGGTTGACGGTGCCGC 62.025 66.667 10.87 4.47 44.19 6.53
395 423 1.468520 CTAATGGCTTGGTTGACGGTG 59.531 52.381 0.00 0.00 0.00 4.94
396 424 1.073284 ACTAATGGCTTGGTTGACGGT 59.927 47.619 0.00 0.00 0.00 4.83
402 430 1.073284 ACGTGGACTAATGGCTTGGTT 59.927 47.619 0.00 0.00 0.00 3.67
403 431 0.690762 ACGTGGACTAATGGCTTGGT 59.309 50.000 0.00 0.00 0.00 3.67
411 439 7.811713 GTCTAGAAAACACTTACGTGGACTAAT 59.188 37.037 0.00 0.00 45.50 1.73
421 449 5.284079 TCACCGTGTCTAGAAAACACTTAC 58.716 41.667 10.46 0.00 43.83 2.34
432 460 4.377022 CCGTTGAAAAATCACCGTGTCTAG 60.377 45.833 0.00 0.00 0.00 2.43
434 462 2.289547 CCGTTGAAAAATCACCGTGTCT 59.710 45.455 0.00 0.00 0.00 3.41
435 463 2.288458 TCCGTTGAAAAATCACCGTGTC 59.712 45.455 0.00 0.00 0.00 3.67
437 465 3.552604 ATCCGTTGAAAAATCACCGTG 57.447 42.857 0.00 0.00 0.00 4.94
462 511 3.939592 GGTTTGCAGAATACCACCTAGTC 59.060 47.826 4.96 0.00 32.12 2.59
471 520 7.645340 CACATTTATGCTAGGTTTGCAGAATAC 59.355 37.037 0.00 0.00 44.04 1.89
473 522 6.406177 CCACATTTATGCTAGGTTTGCAGAAT 60.406 38.462 0.00 0.00 44.04 2.40
504 553 5.235401 GCCTTGAACCGAATTAAAAGCAAAA 59.765 36.000 0.00 0.00 0.00 2.44
506 555 4.202161 TGCCTTGAACCGAATTAAAAGCAA 60.202 37.500 0.00 0.00 0.00 3.91
516 565 2.955660 ACTTTCATTGCCTTGAACCGAA 59.044 40.909 0.00 0.00 35.42 4.30
518 567 2.034558 ACACTTTCATTGCCTTGAACCG 59.965 45.455 0.00 0.00 35.42 4.44
537 586 9.399797 AGTATTTTTCATATCAATGAGCTGACA 57.600 29.630 0.00 0.00 42.97 3.58
750 1012 2.102588 GAGGTGGTATTGGCGTAGTGAT 59.897 50.000 0.00 0.00 0.00 3.06
759 1021 3.931907 TTGATGAGGAGGTGGTATTGG 57.068 47.619 0.00 0.00 0.00 3.16
796 1063 3.826157 TCTGTTTGGAATTGGTGATGGAC 59.174 43.478 0.00 0.00 0.00 4.02
797 1064 4.111255 TCTGTTTGGAATTGGTGATGGA 57.889 40.909 0.00 0.00 0.00 3.41
798 1065 4.281688 AGTTCTGTTTGGAATTGGTGATGG 59.718 41.667 0.00 0.00 0.00 3.51
799 1066 5.009911 TCAGTTCTGTTTGGAATTGGTGATG 59.990 40.000 0.00 0.00 34.91 3.07
800 1067 5.139727 TCAGTTCTGTTTGGAATTGGTGAT 58.860 37.500 0.00 0.00 34.91 3.06
801 1068 4.531854 TCAGTTCTGTTTGGAATTGGTGA 58.468 39.130 0.00 0.00 34.91 4.02
802 1069 4.916983 TCAGTTCTGTTTGGAATTGGTG 57.083 40.909 0.00 0.00 34.91 4.17
803 1070 4.956075 ACTTCAGTTCTGTTTGGAATTGGT 59.044 37.500 0.00 0.00 34.91 3.67
808 1075 2.612212 GCGACTTCAGTTCTGTTTGGAA 59.388 45.455 0.00 0.00 0.00 3.53
821 1088 3.436704 CCAGATTAAGCAAAGCGACTTCA 59.563 43.478 0.00 0.00 0.00 3.02
870 1137 1.784593 AGGATGGCATGATCATGGGAA 59.215 47.619 31.62 4.88 39.16 3.97
873 1140 0.888619 GCAGGATGGCATGATCATGG 59.111 55.000 31.62 17.01 35.21 3.66
885 1152 5.047802 GGTTCACCCATATTTATGCAGGATG 60.048 44.000 0.00 0.00 40.87 3.51
909 1183 2.040544 GGTGCAGACAACCGGGATG 61.041 63.158 6.32 7.25 0.00 3.51
953 1227 3.055094 TCTCAGATTTCTGGGTAACTGGC 60.055 47.826 7.31 0.00 44.67 4.85
1251 1525 3.781770 CTGCGGGAGAGTGATCGCC 62.782 68.421 1.76 0.00 46.51 5.54
1255 1529 0.461961 GTTAGCTGCGGGAGAGTGAT 59.538 55.000 0.00 0.00 0.00 3.06
1299 1573 3.647649 CTGAGGCACGGTGATCGCA 62.648 63.158 13.29 9.82 43.89 5.10
1314 1588 2.281484 GGCGGCAAAGTGACCTGA 60.281 61.111 3.07 0.00 0.00 3.86
1316 1590 3.210012 ATGGGCGGCAAAGTGACCT 62.210 57.895 12.47 0.00 0.00 3.85
1317 1591 2.676471 ATGGGCGGCAAAGTGACC 60.676 61.111 12.47 0.00 0.00 4.02
1318 1592 2.568090 CATGGGCGGCAAAGTGAC 59.432 61.111 12.47 0.00 0.00 3.67
1319 1593 3.372730 GCATGGGCGGCAAAGTGA 61.373 61.111 12.47 0.00 0.00 3.41
1320 1594 4.440127 GGCATGGGCGGCAAAGTG 62.440 66.667 12.47 4.53 42.47 3.16
1351 1625 2.668550 GACCTTGGGCACGGTGAC 60.669 66.667 13.29 9.38 32.62 3.67
1352 1626 3.164977 TGACCTTGGGCACGGTGA 61.165 61.111 13.29 0.00 32.62 4.02
1353 1627 2.978010 GTGACCTTGGGCACGGTG 60.978 66.667 10.15 3.15 32.62 4.94
1354 1628 4.619227 CGTGACCTTGGGCACGGT 62.619 66.667 33.26 0.00 43.66 4.83
1357 1631 3.030652 CAACGTGACCTTGGGCAC 58.969 61.111 15.33 15.33 0.00 5.01
1358 1632 2.904866 GCAACGTGACCTTGGGCA 60.905 61.111 0.00 0.00 0.00 5.36
1359 1633 3.670377 GGCAACGTGACCTTGGGC 61.670 66.667 0.00 0.00 0.00 5.36
1407 1681 2.112297 GGCAACGTGACCTTGGGA 59.888 61.111 0.00 0.00 0.00 4.37
1437 1759 1.010125 CACCTTCGGCACAACAACG 60.010 57.895 0.00 0.00 0.00 4.10
1505 1827 1.227943 GCAGGCATCGGAGGCAATA 60.228 57.895 17.05 0.00 36.37 1.90
1522 1844 0.951558 ACGTTCACAGTGGGAAATGC 59.048 50.000 9.99 0.00 0.00 3.56
1524 1846 0.951558 GCACGTTCACAGTGGGAAAT 59.048 50.000 9.99 0.00 39.80 2.17
1525 1847 1.098712 GGCACGTTCACAGTGGGAAA 61.099 55.000 9.99 0.00 39.80 3.13
1571 1893 1.078497 CTGGTTCGTGCCTATGCCA 60.078 57.895 0.40 0.00 36.33 4.92
1572 1894 0.811616 CTCTGGTTCGTGCCTATGCC 60.812 60.000 0.40 0.00 36.33 4.40
1596 1918 2.104963 GGAAATGTAGATTCCCGCTCCT 59.895 50.000 0.00 0.00 40.41 3.69
1613 1935 7.461182 CCAAATGGTCTAGTAAACATGGAAA 57.539 36.000 0.00 0.00 0.00 3.13
1630 1970 2.813172 GTGAATGGCCAAAACCAAATGG 59.187 45.455 10.96 0.00 44.65 3.16
1637 1977 2.924880 GCTAACGGTGAATGGCCAAAAC 60.925 50.000 10.96 8.54 0.00 2.43
1649 1989 1.314730 AAACAAGGTGGCTAACGGTG 58.685 50.000 0.00 0.00 0.00 4.94
1656 1996 4.462483 CCACATAATGTAAACAAGGTGGCT 59.538 41.667 5.88 0.00 38.22 4.75
1661 2001 6.834168 AGGAACCACATAATGTAAACAAGG 57.166 37.500 0.00 0.00 0.00 3.61
1674 2014 6.323739 ACACACAAAGAAAATAGGAACCACAT 59.676 34.615 0.00 0.00 0.00 3.21
1677 2017 5.654650 ACACACACAAAGAAAATAGGAACCA 59.345 36.000 0.00 0.00 0.00 3.67
1690 2030 5.984233 ACATACTACACACACACACAAAG 57.016 39.130 0.00 0.00 0.00 2.77
1694 2034 6.671190 TGTACTACATACTACACACACACAC 58.329 40.000 0.00 0.00 34.56 3.82
1718 2076 3.555966 GGCCATTGACAAGCCTAATACT 58.444 45.455 10.45 0.00 43.62 2.12
1719 2077 3.990318 GGCCATTGACAAGCCTAATAC 57.010 47.619 10.45 0.00 43.62 1.89
1825 2184 8.124823 ACATGACGAATTATTGCTCAGTAATTG 58.875 33.333 12.91 9.03 34.65 2.32
1827 2186 7.633621 CACATGACGAATTATTGCTCAGTAAT 58.366 34.615 0.00 0.00 0.00 1.89
1831 2190 4.201841 TGCACATGACGAATTATTGCTCAG 60.202 41.667 0.00 0.00 0.00 3.35
1838 2197 7.041780 GGAGTTAGAATGCACATGACGAATTAT 60.042 37.037 0.00 0.00 0.00 1.28
1841 2200 4.572389 GGAGTTAGAATGCACATGACGAAT 59.428 41.667 0.00 0.00 0.00 3.34
1842 2201 3.932710 GGAGTTAGAATGCACATGACGAA 59.067 43.478 0.00 0.00 0.00 3.85
1843 2202 3.056179 TGGAGTTAGAATGCACATGACGA 60.056 43.478 0.00 0.00 0.00 4.20
1846 2205 4.650734 TGTTGGAGTTAGAATGCACATGA 58.349 39.130 0.00 0.00 0.00 3.07
1854 2213 7.449704 AGAAAGCAGATTTGTTGGAGTTAGAAT 59.550 33.333 0.00 0.00 0.00 2.40
1855 2214 6.772716 AGAAAGCAGATTTGTTGGAGTTAGAA 59.227 34.615 0.00 0.00 0.00 2.10
1876 2235 2.561419 CGGAGGGAGTACTTGTCAGAAA 59.439 50.000 0.00 0.00 0.00 2.52
1886 2245 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73
1889 2248 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
1890 2249 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
1892 2251 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
1893 2252 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
1895 2254 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
1896 2255 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
1897 2256 2.991190 TCTGCGACAAGTAATTCCGAAC 59.009 45.455 0.00 0.00 0.00 3.95
1898 2257 3.306917 TCTGCGACAAGTAATTCCGAA 57.693 42.857 0.00 0.00 0.00 4.30
1899 2258 3.306917 TTCTGCGACAAGTAATTCCGA 57.693 42.857 0.00 0.00 0.00 4.55
1901 2260 6.903883 TCTATTTCTGCGACAAGTAATTCC 57.096 37.500 0.00 0.00 0.00 3.01
1907 2266 6.810911 AGATACATCTATTTCTGCGACAAGT 58.189 36.000 0.00 0.00 34.85 3.16
1908 2267 8.293157 TCTAGATACATCTATTTCTGCGACAAG 58.707 37.037 0.00 0.00 38.60 3.16
1911 2270 7.585867 TGTCTAGATACATCTATTTCTGCGAC 58.414 38.462 0.00 3.44 38.60 5.19
1913 2272 9.497030 GTATGTCTAGATACATCTATTTCTGCG 57.503 37.037 0.00 0.00 40.52 5.18
1926 2285 7.274468 CGCAGAAATGGATGTATGTCTAGATAC 59.726 40.741 0.00 0.00 0.00 2.24
1927 2286 7.176690 TCGCAGAAATGGATGTATGTCTAGATA 59.823 37.037 0.00 0.00 0.00 1.98
1928 2287 6.015095 TCGCAGAAATGGATGTATGTCTAGAT 60.015 38.462 0.00 0.00 0.00 1.98
1930 2289 5.403766 GTCGCAGAAATGGATGTATGTCTAG 59.596 44.000 0.00 0.00 39.69 2.43
1933 2292 3.871006 TGTCGCAGAAATGGATGTATGTC 59.129 43.478 0.00 0.00 39.69 3.06
1934 2293 3.872696 TGTCGCAGAAATGGATGTATGT 58.127 40.909 0.00 0.00 39.69 2.29
1936 2295 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
1937 2296 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
1938 2297 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
1941 2300 4.394920 GGAATTACTTGTCGCAGAAATGGA 59.605 41.667 0.00 0.00 39.69 3.41
1942 2301 4.662145 GGAATTACTTGTCGCAGAAATGG 58.338 43.478 0.00 0.00 39.69 3.16
1943 2302 4.092821 TCGGAATTACTTGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
1944 2303 4.250464 TCGGAATTACTTGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
1945 2304 3.655486 TCGGAATTACTTGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
1946 2305 3.306917 TCGGAATTACTTGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
1949 2308 2.734606 CAGTTCGGAATTACTTGTCGCA 59.265 45.455 0.00 0.00 0.00 5.10
1950 2309 2.991190 TCAGTTCGGAATTACTTGTCGC 59.009 45.455 0.00 0.00 0.00 5.19
1951 2310 3.612860 CCTCAGTTCGGAATTACTTGTCG 59.387 47.826 0.00 0.00 0.00 4.35
1952 2311 3.933332 CCCTCAGTTCGGAATTACTTGTC 59.067 47.826 0.00 0.00 0.00 3.18
1953 2312 3.581332 TCCCTCAGTTCGGAATTACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
1954 2313 4.184629 CTCCCTCAGTTCGGAATTACTTG 58.815 47.826 0.00 0.00 0.00 3.16
1955 2314 3.838903 ACTCCCTCAGTTCGGAATTACTT 59.161 43.478 0.00 0.00 26.56 2.24
1956 2315 3.442076 ACTCCCTCAGTTCGGAATTACT 58.558 45.455 0.00 0.00 26.56 2.24
1957 2316 3.889520 ACTCCCTCAGTTCGGAATTAC 57.110 47.619 0.00 0.00 26.56 1.89
1958 2317 6.837568 ACTTATACTCCCTCAGTTCGGAATTA 59.162 38.462 0.00 0.00 36.43 1.40
1959 2318 5.661759 ACTTATACTCCCTCAGTTCGGAATT 59.338 40.000 0.00 0.00 36.43 2.17
1961 2320 4.607239 ACTTATACTCCCTCAGTTCGGAA 58.393 43.478 0.00 0.00 36.43 4.30
1962 2321 4.246712 ACTTATACTCCCTCAGTTCGGA 57.753 45.455 0.00 0.00 36.43 4.55
1963 2322 5.105473 TCAAACTTATACTCCCTCAGTTCGG 60.105 44.000 0.00 0.00 36.43 4.30
1964 2323 5.962433 TCAAACTTATACTCCCTCAGTTCG 58.038 41.667 0.00 0.00 36.43 3.95
1965 2324 5.813157 GCTCAAACTTATACTCCCTCAGTTC 59.187 44.000 0.00 0.00 36.43 3.01
1966 2325 5.248477 TGCTCAAACTTATACTCCCTCAGTT 59.752 40.000 0.00 0.00 36.43 3.16
1967 2326 4.777896 TGCTCAAACTTATACTCCCTCAGT 59.222 41.667 0.00 0.00 39.41 3.41
1968 2327 5.344743 TGCTCAAACTTATACTCCCTCAG 57.655 43.478 0.00 0.00 0.00 3.35
1971 2330 6.313519 TGATTGCTCAAACTTATACTCCCT 57.686 37.500 0.00 0.00 0.00 4.20
1972 2331 6.374333 TGTTGATTGCTCAAACTTATACTCCC 59.626 38.462 0.00 0.00 42.85 4.30
1976 2552 8.289618 TCAACTGTTGATTGCTCAAACTTATAC 58.710 33.333 18.69 0.00 42.85 1.47
1980 2556 5.581126 TCAACTGTTGATTGCTCAAACTT 57.419 34.783 18.69 0.00 42.85 2.66
1981 2557 5.105797 TGTTCAACTGTTGATTGCTCAAACT 60.106 36.000 22.60 0.00 42.85 2.66
1982 2558 5.004726 GTGTTCAACTGTTGATTGCTCAAAC 59.995 40.000 22.60 15.28 42.85 2.93
1990 2566 7.391148 AAGTACTTGTGTTCAACTGTTGATT 57.609 32.000 22.60 8.20 39.84 2.57
1991 2567 6.038271 GGAAGTACTTGTGTTCAACTGTTGAT 59.962 38.462 22.60 9.51 39.84 2.57
1993 2569 5.354234 AGGAAGTACTTGTGTTCAACTGTTG 59.646 40.000 14.14 14.24 0.00 3.33
1996 2572 4.511826 GGAGGAAGTACTTGTGTTCAACTG 59.488 45.833 14.14 0.00 0.00 3.16
2012 2588 7.495934 ACATCTTATGTTTATGAACGGAGGAAG 59.504 37.037 0.00 0.00 41.63 3.46
2013 2589 7.335627 ACATCTTATGTTTATGAACGGAGGAA 58.664 34.615 0.00 0.00 41.63 3.36
2014 2590 6.884832 ACATCTTATGTTTATGAACGGAGGA 58.115 36.000 0.00 0.00 41.63 3.71
2039 2615 9.958180 TCTGTAGTCCATATTGAAATCTCAAAA 57.042 29.630 0.00 0.00 44.64 2.44
2040 2616 9.383519 GTCTGTAGTCCATATTGAAATCTCAAA 57.616 33.333 0.00 0.00 44.64 2.69
2041 2617 8.539544 TGTCTGTAGTCCATATTGAAATCTCAA 58.460 33.333 0.00 0.00 45.53 3.02
2042 2618 8.078060 TGTCTGTAGTCCATATTGAAATCTCA 57.922 34.615 0.00 0.00 0.00 3.27
2043 2619 7.655328 CCTGTCTGTAGTCCATATTGAAATCTC 59.345 40.741 0.00 0.00 0.00 2.75
2044 2620 7.504403 CCTGTCTGTAGTCCATATTGAAATCT 58.496 38.462 0.00 0.00 0.00 2.40
2045 2621 6.203723 GCCTGTCTGTAGTCCATATTGAAATC 59.796 42.308 0.00 0.00 0.00 2.17
2046 2622 6.058183 GCCTGTCTGTAGTCCATATTGAAAT 58.942 40.000 0.00 0.00 0.00 2.17
2047 2623 5.189736 AGCCTGTCTGTAGTCCATATTGAAA 59.810 40.000 0.00 0.00 0.00 2.69
2048 2624 4.716784 AGCCTGTCTGTAGTCCATATTGAA 59.283 41.667 0.00 0.00 0.00 2.69
2049 2625 4.100035 CAGCCTGTCTGTAGTCCATATTGA 59.900 45.833 0.00 0.00 38.02 2.57
2050 2626 4.100035 TCAGCCTGTCTGTAGTCCATATTG 59.900 45.833 0.00 0.00 43.32 1.90
2051 2627 4.290093 TCAGCCTGTCTGTAGTCCATATT 58.710 43.478 0.00 0.00 43.32 1.28
2052 2628 3.916035 TCAGCCTGTCTGTAGTCCATAT 58.084 45.455 0.00 0.00 43.32 1.78
2053 2629 3.382083 TCAGCCTGTCTGTAGTCCATA 57.618 47.619 0.00 0.00 43.32 2.74
2054 2630 2.238084 TCAGCCTGTCTGTAGTCCAT 57.762 50.000 0.00 0.00 43.32 3.41
2055 2631 2.009681 TTCAGCCTGTCTGTAGTCCA 57.990 50.000 0.00 0.00 43.32 4.02
2056 2632 3.055819 TCATTTCAGCCTGTCTGTAGTCC 60.056 47.826 0.00 0.00 43.32 3.85
2057 2633 4.180057 CTCATTTCAGCCTGTCTGTAGTC 58.820 47.826 0.00 0.00 43.32 2.59
2058 2634 3.580458 ACTCATTTCAGCCTGTCTGTAGT 59.420 43.478 0.00 0.00 43.32 2.73
2059 2635 3.931468 CACTCATTTCAGCCTGTCTGTAG 59.069 47.826 0.00 0.00 43.32 2.74
2060 2636 3.578282 TCACTCATTTCAGCCTGTCTGTA 59.422 43.478 0.00 0.00 43.32 2.74
2061 2637 2.369860 TCACTCATTTCAGCCTGTCTGT 59.630 45.455 0.00 0.00 43.32 3.41
2062 2638 2.740981 GTCACTCATTTCAGCCTGTCTG 59.259 50.000 0.00 0.00 44.21 3.51
2063 2639 2.289945 GGTCACTCATTTCAGCCTGTCT 60.290 50.000 0.00 0.00 0.00 3.41
2064 2640 2.079925 GGTCACTCATTTCAGCCTGTC 58.920 52.381 0.00 0.00 0.00 3.51
2065 2641 1.421268 TGGTCACTCATTTCAGCCTGT 59.579 47.619 0.00 0.00 0.00 4.00
2066 2642 2.189594 TGGTCACTCATTTCAGCCTG 57.810 50.000 0.00 0.00 0.00 4.85
2067 2643 2.887152 GTTTGGTCACTCATTTCAGCCT 59.113 45.455 0.00 0.00 0.00 4.58
2068 2644 2.622942 TGTTTGGTCACTCATTTCAGCC 59.377 45.455 0.00 0.00 0.00 4.85
2069 2645 3.066621 TGTGTTTGGTCACTCATTTCAGC 59.933 43.478 0.00 0.00 38.90 4.26
2070 2646 4.336433 AGTGTGTTTGGTCACTCATTTCAG 59.664 41.667 0.00 0.00 40.28 3.02
2071 2647 4.269183 AGTGTGTTTGGTCACTCATTTCA 58.731 39.130 0.00 0.00 40.28 2.69
2072 2648 4.900635 AGTGTGTTTGGTCACTCATTTC 57.099 40.909 0.00 0.00 40.28 2.17
2073 2649 6.767524 TTTAGTGTGTTTGGTCACTCATTT 57.232 33.333 1.08 0.00 42.77 2.32
2074 2650 6.560711 GTTTTAGTGTGTTTGGTCACTCATT 58.439 36.000 1.08 0.00 42.77 2.57
2075 2651 5.220777 CGTTTTAGTGTGTTTGGTCACTCAT 60.221 40.000 1.08 0.00 42.77 2.90
2076 2652 4.093703 CGTTTTAGTGTGTTTGGTCACTCA 59.906 41.667 1.08 0.00 42.77 3.41
2077 2653 4.093850 ACGTTTTAGTGTGTTTGGTCACTC 59.906 41.667 1.08 0.00 42.77 3.51
2078 2654 4.004982 ACGTTTTAGTGTGTTTGGTCACT 58.995 39.130 0.00 0.00 45.21 3.41
2079 2655 4.092816 CACGTTTTAGTGTGTTTGGTCAC 58.907 43.478 0.00 0.00 37.35 3.67
2080 2656 4.343811 CACGTTTTAGTGTGTTTGGTCA 57.656 40.909 0.00 0.00 37.35 4.02
2090 2666 9.524106 TTGGATGTATATAGACACGTTTTAGTG 57.476 33.333 1.52 0.00 46.83 2.74
2091 2667 9.525409 GTTGGATGTATATAGACACGTTTTAGT 57.475 33.333 1.52 0.00 30.52 2.24
2092 2668 9.745880 AGTTGGATGTATATAGACACGTTTTAG 57.254 33.333 1.52 0.00 30.52 1.85
2093 2669 9.740239 GAGTTGGATGTATATAGACACGTTTTA 57.260 33.333 1.52 0.00 30.52 1.52
2094 2670 8.255206 TGAGTTGGATGTATATAGACACGTTTT 58.745 33.333 1.52 0.00 30.52 2.43
2095 2671 7.778083 TGAGTTGGATGTATATAGACACGTTT 58.222 34.615 1.52 0.00 30.52 3.60
2096 2672 7.284716 TCTGAGTTGGATGTATATAGACACGTT 59.715 37.037 1.52 0.00 30.52 3.99
2097 2673 6.771267 TCTGAGTTGGATGTATATAGACACGT 59.229 38.462 1.52 0.00 30.52 4.49
2098 2674 7.203255 TCTGAGTTGGATGTATATAGACACG 57.797 40.000 1.52 0.00 30.52 4.49
2099 2675 9.817809 TTTTCTGAGTTGGATGTATATAGACAC 57.182 33.333 1.52 0.00 30.52 3.67
2134 2710 9.971922 CTCCTTTGTTCACAAATAAGATTTTCT 57.028 29.630 5.59 0.00 43.92 2.52
2135 2711 9.750125 ACTCCTTTGTTCACAAATAAGATTTTC 57.250 29.630 15.73 0.00 43.92 2.29
2138 2714 9.349713 TGTACTCCTTTGTTCACAAATAAGATT 57.650 29.630 15.73 7.64 43.92 2.40
2139 2715 8.918202 TGTACTCCTTTGTTCACAAATAAGAT 57.082 30.769 15.73 7.33 43.92 2.40
2140 2716 8.918202 ATGTACTCCTTTGTTCACAAATAAGA 57.082 30.769 15.73 9.12 43.92 2.10
2142 2718 8.726988 GCTATGTACTCCTTTGTTCACAAATAA 58.273 33.333 5.59 0.00 43.92 1.40
2143 2719 8.100791 AGCTATGTACTCCTTTGTTCACAAATA 58.899 33.333 5.59 0.00 43.92 1.40
2144 2720 6.942576 AGCTATGTACTCCTTTGTTCACAAAT 59.057 34.615 5.59 0.00 43.92 2.32
2145 2721 6.296026 AGCTATGTACTCCTTTGTTCACAAA 58.704 36.000 5.05 5.05 42.90 2.83
2146 2722 5.865085 AGCTATGTACTCCTTTGTTCACAA 58.135 37.500 0.00 0.00 0.00 3.33
2147 2723 5.483685 AGCTATGTACTCCTTTGTTCACA 57.516 39.130 0.00 0.00 0.00 3.58
2148 2724 6.752815 GTCTAGCTATGTACTCCTTTGTTCAC 59.247 42.308 0.00 0.00 0.00 3.18
2149 2725 6.663953 AGTCTAGCTATGTACTCCTTTGTTCA 59.336 38.462 0.00 0.00 0.00 3.18
2150 2726 6.975772 CAGTCTAGCTATGTACTCCTTTGTTC 59.024 42.308 0.00 0.00 0.00 3.18
2151 2727 6.127310 CCAGTCTAGCTATGTACTCCTTTGTT 60.127 42.308 0.00 0.00 0.00 2.83
2152 2728 5.361285 CCAGTCTAGCTATGTACTCCTTTGT 59.639 44.000 0.00 0.00 0.00 2.83
2153 2729 5.594725 TCCAGTCTAGCTATGTACTCCTTTG 59.405 44.000 0.00 0.00 0.00 2.77
2154 2730 5.595133 GTCCAGTCTAGCTATGTACTCCTTT 59.405 44.000 0.00 0.00 0.00 3.11
2155 2731 5.134661 GTCCAGTCTAGCTATGTACTCCTT 58.865 45.833 0.00 0.00 0.00 3.36
2156 2732 4.166337 TGTCCAGTCTAGCTATGTACTCCT 59.834 45.833 0.00 0.00 0.00 3.69
2157 2733 4.462133 TGTCCAGTCTAGCTATGTACTCC 58.538 47.826 0.00 0.00 0.00 3.85
2158 2734 6.001460 AGATGTCCAGTCTAGCTATGTACTC 58.999 44.000 0.00 0.00 0.00 2.59
2159 2735 5.947663 AGATGTCCAGTCTAGCTATGTACT 58.052 41.667 0.00 0.00 0.00 2.73
2165 2741 5.016831 TGTCAAAGATGTCCAGTCTAGCTA 58.983 41.667 0.00 0.00 0.00 3.32
2167 2743 4.193826 TGTCAAAGATGTCCAGTCTAGC 57.806 45.455 0.00 0.00 0.00 3.42
2175 2751 5.602628 GGAGGTAGTATGTCAAAGATGTCC 58.397 45.833 0.00 0.00 0.00 4.02
2189 2767 5.954150 AGAGTAATTTGGAACGGAGGTAGTA 59.046 40.000 0.00 0.00 0.00 1.82
2190 2768 4.776308 AGAGTAATTTGGAACGGAGGTAGT 59.224 41.667 0.00 0.00 0.00 2.73
2191 2769 5.109903 CAGAGTAATTTGGAACGGAGGTAG 58.890 45.833 0.00 0.00 0.00 3.18
2192 2770 4.529377 ACAGAGTAATTTGGAACGGAGGTA 59.471 41.667 0.00 0.00 0.00 3.08
2193 2771 3.326880 ACAGAGTAATTTGGAACGGAGGT 59.673 43.478 0.00 0.00 0.00 3.85
2194 2772 3.933332 GACAGAGTAATTTGGAACGGAGG 59.067 47.826 0.00 0.00 0.00 4.30
2195 2773 3.612860 CGACAGAGTAATTTGGAACGGAG 59.387 47.826 0.00 0.00 0.00 4.63
2196 2774 3.581755 CGACAGAGTAATTTGGAACGGA 58.418 45.455 0.00 0.00 0.00 4.69
2197 2775 2.093783 GCGACAGAGTAATTTGGAACGG 59.906 50.000 0.00 0.00 0.00 4.44
2198 2776 2.993899 AGCGACAGAGTAATTTGGAACG 59.006 45.455 0.00 0.00 0.00 3.95
2199 2777 3.994392 TCAGCGACAGAGTAATTTGGAAC 59.006 43.478 0.00 0.00 0.00 3.62
2200 2778 4.265904 TCAGCGACAGAGTAATTTGGAA 57.734 40.909 0.00 0.00 0.00 3.53
2201 2779 3.953712 TCAGCGACAGAGTAATTTGGA 57.046 42.857 0.00 0.00 0.00 3.53
2202 2780 5.327091 CATTTCAGCGACAGAGTAATTTGG 58.673 41.667 0.00 0.00 0.00 3.28
2203 2781 5.122239 TCCATTTCAGCGACAGAGTAATTTG 59.878 40.000 0.00 0.00 0.00 2.32
2204 2782 5.245531 TCCATTTCAGCGACAGAGTAATTT 58.754 37.500 0.00 0.00 0.00 1.82
2205 2783 4.832248 TCCATTTCAGCGACAGAGTAATT 58.168 39.130 0.00 0.00 0.00 1.40
2206 2784 4.471904 TCCATTTCAGCGACAGAGTAAT 57.528 40.909 0.00 0.00 0.00 1.89
2207 2785 3.953712 TCCATTTCAGCGACAGAGTAA 57.046 42.857 0.00 0.00 0.00 2.24
2208 2786 3.195610 ACATCCATTTCAGCGACAGAGTA 59.804 43.478 0.00 0.00 0.00 2.59
2209 2787 2.027745 ACATCCATTTCAGCGACAGAGT 60.028 45.455 0.00 0.00 0.00 3.24
2210 2788 2.625737 ACATCCATTTCAGCGACAGAG 58.374 47.619 0.00 0.00 0.00 3.35
2211 2789 2.768253 ACATCCATTTCAGCGACAGA 57.232 45.000 0.00 0.00 0.00 3.41
2212 2790 4.375272 AGATACATCCATTTCAGCGACAG 58.625 43.478 0.00 0.00 0.00 3.51
2213 2791 4.406648 AGATACATCCATTTCAGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
2214 2792 5.773575 TCTAGATACATCCATTTCAGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
2215 2793 6.040955 AGTTCTAGATACATCCATTTCAGCGA 59.959 38.462 0.00 0.00 0.00 4.93
2216 2794 6.219473 AGTTCTAGATACATCCATTTCAGCG 58.781 40.000 0.00 0.00 0.00 5.18
2217 2795 9.547753 TTTAGTTCTAGATACATCCATTTCAGC 57.452 33.333 0.00 0.00 0.00 4.26
2243 2821 8.191446 GCACGTATGGATGTATCTAGATGTATT 58.809 37.037 15.79 0.00 29.44 1.89
2244 2822 7.467403 CGCACGTATGGATGTATCTAGATGTAT 60.467 40.741 15.79 9.11 29.44 2.29
2245 2823 6.183360 CGCACGTATGGATGTATCTAGATGTA 60.183 42.308 15.79 4.44 29.44 2.29
2246 2824 5.392057 CGCACGTATGGATGTATCTAGATGT 60.392 44.000 15.79 1.25 30.36 3.06
2247 2825 5.030936 CGCACGTATGGATGTATCTAGATG 58.969 45.833 15.79 0.00 0.00 2.90
2248 2826 4.941873 TCGCACGTATGGATGTATCTAGAT 59.058 41.667 10.73 10.73 0.00 1.98
2249 2827 4.153655 GTCGCACGTATGGATGTATCTAGA 59.846 45.833 0.00 0.00 0.00 2.43
2250 2828 4.083484 TGTCGCACGTATGGATGTATCTAG 60.083 45.833 0.00 0.00 0.00 2.43
2251 2829 3.816523 TGTCGCACGTATGGATGTATCTA 59.183 43.478 0.00 0.00 0.00 1.98
2252 2830 2.621526 TGTCGCACGTATGGATGTATCT 59.378 45.455 0.00 0.00 0.00 1.98
2253 2831 3.007979 TGTCGCACGTATGGATGTATC 57.992 47.619 0.00 0.00 0.00 2.24
2254 2832 3.181479 ACTTGTCGCACGTATGGATGTAT 60.181 43.478 0.00 0.00 0.00 2.29
2255 2833 2.164827 ACTTGTCGCACGTATGGATGTA 59.835 45.455 0.00 0.00 0.00 2.29
2256 2834 1.067142 ACTTGTCGCACGTATGGATGT 60.067 47.619 0.00 0.00 0.00 3.06
2257 2835 1.640428 ACTTGTCGCACGTATGGATG 58.360 50.000 0.00 0.00 0.00 3.51
2258 2836 3.513680 TTACTTGTCGCACGTATGGAT 57.486 42.857 0.00 0.00 0.00 3.41
2259 2837 3.513680 ATTACTTGTCGCACGTATGGA 57.486 42.857 0.00 0.00 0.00 3.41
2260 2838 3.301579 CGAATTACTTGTCGCACGTATGG 60.302 47.826 0.00 0.00 0.00 2.74
2261 2839 3.301579 CCGAATTACTTGTCGCACGTATG 60.302 47.826 0.00 0.00 35.93 2.39
2262 2840 2.855963 CCGAATTACTTGTCGCACGTAT 59.144 45.455 0.00 0.00 35.93 3.06
2263 2841 2.095314 TCCGAATTACTTGTCGCACGTA 60.095 45.455 0.00 0.00 35.93 3.57
2264 2842 1.065358 CCGAATTACTTGTCGCACGT 58.935 50.000 0.00 0.00 35.93 4.49
2265 2843 1.342555 TCCGAATTACTTGTCGCACG 58.657 50.000 0.00 0.00 35.93 5.34
2266 2844 2.471749 CGTTCCGAATTACTTGTCGCAC 60.472 50.000 0.00 0.00 35.93 5.34
2267 2845 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
2268 2846 1.723003 ACGTTCCGAATTACTTGTCGC 59.277 47.619 0.00 0.00 35.93 5.19
2269 2847 3.422603 CCAACGTTCCGAATTACTTGTCG 60.423 47.826 0.00 0.00 37.01 4.35
2270 2848 3.120442 CCCAACGTTCCGAATTACTTGTC 60.120 47.826 0.00 0.00 0.00 3.18
2271 2849 2.809696 CCCAACGTTCCGAATTACTTGT 59.190 45.455 0.00 0.00 0.00 3.16
2272 2850 3.068560 TCCCAACGTTCCGAATTACTTG 58.931 45.455 0.00 0.00 0.00 3.16
2273 2851 3.244318 ACTCCCAACGTTCCGAATTACTT 60.244 43.478 0.00 0.00 0.00 2.24
2274 2852 2.301009 ACTCCCAACGTTCCGAATTACT 59.699 45.455 0.00 0.00 0.00 2.24
2275 2853 2.691927 ACTCCCAACGTTCCGAATTAC 58.308 47.619 0.00 0.00 0.00 1.89
2276 2854 3.257873 TGTACTCCCAACGTTCCGAATTA 59.742 43.478 0.00 0.00 0.00 1.40
2277 2855 2.037511 TGTACTCCCAACGTTCCGAATT 59.962 45.455 0.00 0.00 0.00 2.17
2278 2856 1.619827 TGTACTCCCAACGTTCCGAAT 59.380 47.619 0.00 0.00 0.00 3.34
2279 2857 1.039068 TGTACTCCCAACGTTCCGAA 58.961 50.000 0.00 0.00 0.00 4.30
2280 2858 1.259609 ATGTACTCCCAACGTTCCGA 58.740 50.000 0.00 0.00 0.00 4.55
2281 2859 2.088950 AATGTACTCCCAACGTTCCG 57.911 50.000 0.00 0.00 0.00 4.30
2282 2860 6.108015 TGTATAAATGTACTCCCAACGTTCC 58.892 40.000 0.00 0.00 0.00 3.62
2283 2861 7.781548 ATGTATAAATGTACTCCCAACGTTC 57.218 36.000 0.00 0.00 0.00 3.95
2284 2862 7.825270 TGAATGTATAAATGTACTCCCAACGTT 59.175 33.333 0.00 0.00 0.00 3.99
2285 2863 7.332557 TGAATGTATAAATGTACTCCCAACGT 58.667 34.615 0.00 0.00 0.00 3.99
2286 2864 7.780008 TGAATGTATAAATGTACTCCCAACG 57.220 36.000 0.00 0.00 0.00 4.10
2289 2867 9.051679 CGATTTGAATGTATAAATGTACTCCCA 57.948 33.333 0.00 0.00 0.00 4.37
2290 2868 9.052759 ACGATTTGAATGTATAAATGTACTCCC 57.947 33.333 0.00 0.00 0.00 4.30
2293 2871 9.607988 TGGACGATTTGAATGTATAAATGTACT 57.392 29.630 0.00 0.00 0.00 2.73
2320 2898 2.192664 TTGCGGTAATGCTCTTTGGA 57.807 45.000 0.00 0.00 35.36 3.53
2321 2899 3.181397 CATTTGCGGTAATGCTCTTTGG 58.819 45.455 0.00 0.00 35.36 3.28
2335 2913 0.798009 GTTGGATCCGTGCATTTGCG 60.798 55.000 7.39 0.00 45.83 4.85
2338 2916 2.228822 GTGAAGTTGGATCCGTGCATTT 59.771 45.455 7.39 0.00 0.00 2.32
2347 2925 6.374578 GTTCTGCTTAAAGTGAAGTTGGATC 58.625 40.000 0.00 0.00 0.00 3.36
2348 2926 5.049405 CGTTCTGCTTAAAGTGAAGTTGGAT 60.049 40.000 0.00 0.00 0.00 3.41
2353 2931 2.548480 GGCGTTCTGCTTAAAGTGAAGT 59.452 45.455 0.00 0.00 45.43 3.01
2359 2937 1.808411 TCTGGGCGTTCTGCTTAAAG 58.192 50.000 0.00 0.00 45.43 1.85
2363 2941 0.108585 TCTTTCTGGGCGTTCTGCTT 59.891 50.000 0.00 0.00 45.43 3.91
2366 2944 2.972625 TGTATCTTTCTGGGCGTTCTG 58.027 47.619 0.00 0.00 0.00 3.02
2367 2945 3.914426 ATGTATCTTTCTGGGCGTTCT 57.086 42.857 0.00 0.00 0.00 3.01
2496 3074 1.003223 GGCGTTATGTTTGGTATCGGC 60.003 52.381 0.00 0.00 34.33 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.