Multiple sequence alignment - TraesCS2D01G365100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G365100 chr2D 100.000 2690 0 0 1 2690 470212644 470209955 0.000000e+00 4968
1 TraesCS2D01G365100 chr2A 91.082 2108 134 31 610 2690 611942139 611940059 0.000000e+00 2802
2 TraesCS2D01G365100 chr2A 92.632 190 6 2 432 614 196518149 196517961 1.590000e-67 267
3 TraesCS2D01G365100 chr2B 93.094 1868 67 25 610 2429 548952843 548950990 0.000000e+00 2678
4 TraesCS2D01G365100 chr2B 93.305 239 16 0 2452 2690 548950758 548950520 1.180000e-93 353
5 TraesCS2D01G365100 chr7A 89.011 273 28 2 2126 2397 40360809 40361080 1.190000e-88 337
6 TraesCS2D01G365100 chr7A 93.478 184 6 2 428 606 572183170 572183352 4.410000e-68 268
7 TraesCS2D01G365100 chr7A 93.407 182 7 2 433 610 701621294 701621114 5.710000e-67 265
8 TraesCS2D01G365100 chr7A 82.283 254 37 5 2444 2690 40361099 40361351 2.100000e-51 213
9 TraesCS2D01G365100 chr4A 87.912 273 31 2 2126 2397 647087663 647087934 1.200000e-83 320
10 TraesCS2D01G365100 chr4A 87.308 260 21 9 2123 2379 573358602 573358852 1.220000e-73 287
11 TraesCS2D01G365100 chr4A 85.283 265 37 2 2140 2404 647052934 647053196 3.410000e-69 272
12 TraesCS2D01G365100 chr4A 93.855 179 7 1 432 606 466937339 466937517 1.590000e-67 267
13 TraesCS2D01G365100 chr4A 84.307 274 39 4 2126 2397 647039890 647040161 5.710000e-67 265
14 TraesCS2D01G365100 chr4A 92.432 185 12 2 426 610 474756547 474756729 2.050000e-66 263
15 TraesCS2D01G365100 chr4A 83.696 276 41 4 2126 2400 646974383 646974655 9.560000e-65 257
16 TraesCS2D01G365100 chr4A 90.452 199 12 3 418 610 594179999 594180196 3.440000e-64 255
17 TraesCS2D01G365100 chr4A 81.028 253 37 5 2444 2690 647087953 647088200 9.830000e-45 191
18 TraesCS2D01G365100 chr4A 80.992 242 29 14 2444 2671 647040180 647040418 2.750000e-40 176
19 TraesCS2D01G365100 chr3A 94.086 186 9 2 426 610 674734176 674733992 5.670000e-72 281
20 TraesCS2D01G365100 chr4D 86.585 246 23 8 2123 2366 29804516 29804279 2.050000e-66 263
21 TraesCS2D01G365100 chr1A 90.909 198 12 3 419 612 495129175 495128980 7.390000e-66 261
22 TraesCS2D01G365100 chr5D 90.244 205 11 5 419 616 66765218 66765016 2.660000e-65 259
23 TraesCS2D01G365100 chr7D 84.456 193 23 3 2501 2690 40449821 40450009 1.640000e-42 183


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G365100 chr2D 470209955 470212644 2689 True 4968.0 4968 100.0000 1 2690 1 chr2D.!!$R1 2689
1 TraesCS2D01G365100 chr2A 611940059 611942139 2080 True 2802.0 2802 91.0820 610 2690 1 chr2A.!!$R2 2080
2 TraesCS2D01G365100 chr2B 548950520 548952843 2323 True 1515.5 2678 93.1995 610 2690 2 chr2B.!!$R1 2080
3 TraesCS2D01G365100 chr7A 40360809 40361351 542 False 275.0 337 85.6470 2126 2690 2 chr7A.!!$F2 564
4 TraesCS2D01G365100 chr4A 647087663 647088200 537 False 255.5 320 84.4700 2126 2690 2 chr4A.!!$F8 564
5 TraesCS2D01G365100 chr4A 647039890 647040418 528 False 220.5 265 82.6495 2126 2671 2 chr4A.!!$F7 545

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
260 261 0.105039 ATCAATCTTCGGACTCGCCC 59.895 55.0 0.0 0.0 36.13 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1695 1744 0.038159 CCTATCCAATCCGACCGAGC 60.038 60.0 0.0 0.0 0.0 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.502123 CGAGATCTCCTTCTACCTCCT 57.498 52.381 17.13 0.00 0.00 3.69
21 22 3.146066 CGAGATCTCCTTCTACCTCCTG 58.854 54.545 17.13 0.00 0.00 3.86
22 23 3.181449 CGAGATCTCCTTCTACCTCCTGA 60.181 52.174 17.13 0.00 0.00 3.86
23 24 4.687494 CGAGATCTCCTTCTACCTCCTGAA 60.687 50.000 17.13 0.00 0.00 3.02
24 25 5.205056 GAGATCTCCTTCTACCTCCTGAAA 58.795 45.833 12.00 0.00 0.00 2.69
25 26 5.594777 AGATCTCCTTCTACCTCCTGAAAA 58.405 41.667 0.00 0.00 0.00 2.29
26 27 5.660864 AGATCTCCTTCTACCTCCTGAAAAG 59.339 44.000 0.00 0.00 0.00 2.27
27 28 3.515901 TCTCCTTCTACCTCCTGAAAAGC 59.484 47.826 0.00 0.00 0.00 3.51
28 29 3.248024 TCCTTCTACCTCCTGAAAAGCA 58.752 45.455 0.00 0.00 0.00 3.91
29 30 3.846588 TCCTTCTACCTCCTGAAAAGCAT 59.153 43.478 0.00 0.00 0.00 3.79
30 31 4.080863 TCCTTCTACCTCCTGAAAAGCATC 60.081 45.833 0.00 0.00 0.00 3.91
31 32 3.526931 TCTACCTCCTGAAAAGCATCG 57.473 47.619 0.00 0.00 0.00 3.84
32 33 2.832129 TCTACCTCCTGAAAAGCATCGT 59.168 45.455 0.00 0.00 0.00 3.73
33 34 2.568623 ACCTCCTGAAAAGCATCGTT 57.431 45.000 0.00 0.00 0.00 3.85
34 35 2.427506 ACCTCCTGAAAAGCATCGTTC 58.572 47.619 0.00 0.00 0.00 3.95
35 36 2.224523 ACCTCCTGAAAAGCATCGTTCA 60.225 45.455 0.00 0.00 32.91 3.18
36 37 3.012518 CCTCCTGAAAAGCATCGTTCAT 58.987 45.455 0.00 0.00 33.45 2.57
37 38 3.064545 CCTCCTGAAAAGCATCGTTCATC 59.935 47.826 0.00 0.00 33.45 2.92
38 39 2.672874 TCCTGAAAAGCATCGTTCATCG 59.327 45.455 0.00 0.00 41.41 3.84
39 40 2.416547 CCTGAAAAGCATCGTTCATCGT 59.583 45.455 0.00 0.00 40.80 3.73
40 41 3.484229 CCTGAAAAGCATCGTTCATCGTC 60.484 47.826 0.00 0.00 40.80 4.20
41 42 3.325870 TGAAAAGCATCGTTCATCGTCT 58.674 40.909 0.00 0.00 40.80 4.18
42 43 3.745975 TGAAAAGCATCGTTCATCGTCTT 59.254 39.130 0.00 0.00 40.80 3.01
43 44 4.213270 TGAAAAGCATCGTTCATCGTCTTT 59.787 37.500 0.00 0.00 40.80 2.52
44 45 3.999229 AAGCATCGTTCATCGTCTTTC 57.001 42.857 0.00 0.00 40.80 2.62
45 46 2.271800 AGCATCGTTCATCGTCTTTCC 58.728 47.619 0.00 0.00 40.80 3.13
46 47 1.327764 GCATCGTTCATCGTCTTTCCC 59.672 52.381 0.00 0.00 40.80 3.97
47 48 2.616960 CATCGTTCATCGTCTTTCCCA 58.383 47.619 0.00 0.00 40.80 4.37
48 49 3.198068 CATCGTTCATCGTCTTTCCCAT 58.802 45.455 0.00 0.00 40.80 4.00
49 50 2.616960 TCGTTCATCGTCTTTCCCATG 58.383 47.619 0.00 0.00 40.80 3.66
50 51 2.232696 TCGTTCATCGTCTTTCCCATGA 59.767 45.455 0.00 0.00 40.80 3.07
51 52 3.118775 TCGTTCATCGTCTTTCCCATGAT 60.119 43.478 0.00 0.00 40.80 2.45
52 53 3.246226 CGTTCATCGTCTTTCCCATGATC 59.754 47.826 0.00 0.00 34.52 2.92
53 54 4.446371 GTTCATCGTCTTTCCCATGATCT 58.554 43.478 0.00 0.00 0.00 2.75
54 55 4.327982 TCATCGTCTTTCCCATGATCTC 57.672 45.455 0.00 0.00 0.00 2.75
55 56 3.706086 TCATCGTCTTTCCCATGATCTCA 59.294 43.478 0.00 0.00 0.00 3.27
56 57 4.162131 TCATCGTCTTTCCCATGATCTCAA 59.838 41.667 0.00 0.00 0.00 3.02
57 58 4.128925 TCGTCTTTCCCATGATCTCAAG 57.871 45.455 0.00 0.00 0.00 3.02
58 59 3.515502 TCGTCTTTCCCATGATCTCAAGT 59.484 43.478 0.00 0.00 0.00 3.16
59 60 4.020218 TCGTCTTTCCCATGATCTCAAGTT 60.020 41.667 0.00 0.00 0.00 2.66
60 61 4.093998 CGTCTTTCCCATGATCTCAAGTTG 59.906 45.833 0.00 0.00 0.00 3.16
61 62 5.248640 GTCTTTCCCATGATCTCAAGTTGA 58.751 41.667 5.25 5.25 0.00 3.18
62 63 5.707298 GTCTTTCCCATGATCTCAAGTTGAA 59.293 40.000 7.06 0.00 0.00 2.69
63 64 5.707298 TCTTTCCCATGATCTCAAGTTGAAC 59.293 40.000 7.06 2.65 0.00 3.18
64 65 4.916041 TCCCATGATCTCAAGTTGAACT 57.084 40.909 7.06 0.00 0.00 3.01
65 66 4.582869 TCCCATGATCTCAAGTTGAACTG 58.417 43.478 7.06 0.00 0.00 3.16
66 67 3.128242 CCCATGATCTCAAGTTGAACTGC 59.872 47.826 7.06 0.00 0.00 4.40
67 68 3.128242 CCATGATCTCAAGTTGAACTGCC 59.872 47.826 7.06 0.00 0.00 4.85
68 69 2.783135 TGATCTCAAGTTGAACTGCCC 58.217 47.619 7.06 0.00 0.00 5.36
69 70 2.106338 TGATCTCAAGTTGAACTGCCCA 59.894 45.455 7.06 0.00 0.00 5.36
70 71 1.967319 TCTCAAGTTGAACTGCCCAC 58.033 50.000 7.06 0.00 0.00 4.61
71 72 0.588252 CTCAAGTTGAACTGCCCACG 59.412 55.000 7.06 0.00 0.00 4.94
72 73 0.179234 TCAAGTTGAACTGCCCACGA 59.821 50.000 2.20 0.00 0.00 4.35
73 74 1.202758 TCAAGTTGAACTGCCCACGAT 60.203 47.619 2.20 0.00 0.00 3.73
74 75 1.197721 CAAGTTGAACTGCCCACGATC 59.802 52.381 0.00 0.00 0.00 3.69
75 76 0.670546 AGTTGAACTGCCCACGATCG 60.671 55.000 14.88 14.88 0.00 3.69
76 77 2.032634 TTGAACTGCCCACGATCGC 61.033 57.895 16.60 0.00 0.00 4.58
77 78 3.195698 GAACTGCCCACGATCGCC 61.196 66.667 16.60 1.74 0.00 5.54
97 98 3.121030 CCGAACCGCCTGCTTCTG 61.121 66.667 0.00 0.00 0.00 3.02
98 99 2.357517 CGAACCGCCTGCTTCTGT 60.358 61.111 0.00 0.00 0.00 3.41
99 100 2.383527 CGAACCGCCTGCTTCTGTC 61.384 63.158 0.00 0.00 0.00 3.51
100 101 2.357517 AACCGCCTGCTTCTGTCG 60.358 61.111 0.00 0.00 0.00 4.35
104 105 4.704833 GCCTGCTTCTGTCGCCCA 62.705 66.667 0.00 0.00 0.00 5.36
105 106 2.743928 CCTGCTTCTGTCGCCCAC 60.744 66.667 0.00 0.00 0.00 4.61
106 107 3.114616 CTGCTTCTGTCGCCCACG 61.115 66.667 0.00 0.00 42.01 4.94
107 108 4.680237 TGCTTCTGTCGCCCACGG 62.680 66.667 0.00 0.00 40.63 4.94
108 109 4.681978 GCTTCTGTCGCCCACGGT 62.682 66.667 0.00 0.00 40.63 4.83
109 110 2.432628 CTTCTGTCGCCCACGGTC 60.433 66.667 0.00 0.00 40.63 4.79
110 111 4.351938 TTCTGTCGCCCACGGTCG 62.352 66.667 0.00 0.00 40.63 4.79
127 128 2.507324 GGCGACGCTCTTGAGACC 60.507 66.667 20.77 0.00 0.00 3.85
128 129 2.876645 GCGACGCTCTTGAGACCG 60.877 66.667 13.73 0.00 0.00 4.79
129 130 2.876645 CGACGCTCTTGAGACCGC 60.877 66.667 1.30 0.00 0.00 5.68
130 131 2.507324 GACGCTCTTGAGACCGCC 60.507 66.667 1.30 0.00 0.00 6.13
131 132 2.992114 ACGCTCTTGAGACCGCCT 60.992 61.111 1.30 0.00 0.00 5.52
132 133 2.507992 CGCTCTTGAGACCGCCTG 60.508 66.667 1.30 0.00 0.00 4.85
133 134 2.125350 GCTCTTGAGACCGCCTGG 60.125 66.667 1.30 0.00 42.84 4.45
134 135 2.125350 CTCTTGAGACCGCCTGGC 60.125 66.667 9.11 9.11 39.70 4.85
135 136 3.672295 CTCTTGAGACCGCCTGGCC 62.672 68.421 14.12 0.00 39.70 5.36
158 159 4.791069 GCCCTCCCCCTACCGTCA 62.791 72.222 0.00 0.00 0.00 4.35
159 160 2.285868 CCCTCCCCCTACCGTCAT 59.714 66.667 0.00 0.00 0.00 3.06
160 161 2.140792 CCCTCCCCCTACCGTCATG 61.141 68.421 0.00 0.00 0.00 3.07
161 162 2.808206 CCTCCCCCTACCGTCATGC 61.808 68.421 0.00 0.00 0.00 4.06
162 163 1.762460 CTCCCCCTACCGTCATGCT 60.762 63.158 0.00 0.00 0.00 3.79
163 164 1.306654 TCCCCCTACCGTCATGCTT 60.307 57.895 0.00 0.00 0.00 3.91
164 165 0.912487 TCCCCCTACCGTCATGCTTT 60.912 55.000 0.00 0.00 0.00 3.51
165 166 0.463833 CCCCCTACCGTCATGCTTTC 60.464 60.000 0.00 0.00 0.00 2.62
166 167 0.463833 CCCCTACCGTCATGCTTTCC 60.464 60.000 0.00 0.00 0.00 3.13
167 168 0.810031 CCCTACCGTCATGCTTTCCG 60.810 60.000 0.00 0.00 0.00 4.30
168 169 0.108329 CCTACCGTCATGCTTTCCGT 60.108 55.000 0.00 0.00 0.00 4.69
169 170 1.278238 CTACCGTCATGCTTTCCGTC 58.722 55.000 0.00 0.00 0.00 4.79
170 171 0.457166 TACCGTCATGCTTTCCGTCG 60.457 55.000 0.00 0.00 0.00 5.12
171 172 2.395690 CGTCATGCTTTCCGTCGC 59.604 61.111 0.00 0.00 0.00 5.19
172 173 2.785258 GTCATGCTTTCCGTCGCC 59.215 61.111 0.00 0.00 0.00 5.54
173 174 2.435938 TCATGCTTTCCGTCGCCC 60.436 61.111 0.00 0.00 0.00 6.13
174 175 2.436646 CATGCTTTCCGTCGCCCT 60.437 61.111 0.00 0.00 0.00 5.19
175 176 2.125106 ATGCTTTCCGTCGCCCTC 60.125 61.111 0.00 0.00 0.00 4.30
176 177 4.735132 TGCTTTCCGTCGCCCTCG 62.735 66.667 0.00 0.00 0.00 4.63
177 178 4.430765 GCTTTCCGTCGCCCTCGA 62.431 66.667 0.00 0.00 43.28 4.04
185 186 2.275748 TCGCCCTCGACCATCTCT 59.724 61.111 0.00 0.00 40.21 3.10
186 187 1.824329 TCGCCCTCGACCATCTCTC 60.824 63.158 0.00 0.00 40.21 3.20
187 188 1.826054 CGCCCTCGACCATCTCTCT 60.826 63.158 0.00 0.00 38.10 3.10
188 189 0.535328 CGCCCTCGACCATCTCTCTA 60.535 60.000 0.00 0.00 38.10 2.43
189 190 1.693627 GCCCTCGACCATCTCTCTAA 58.306 55.000 0.00 0.00 0.00 2.10
190 191 2.032620 GCCCTCGACCATCTCTCTAAA 58.967 52.381 0.00 0.00 0.00 1.85
191 192 2.223852 GCCCTCGACCATCTCTCTAAAC 60.224 54.545 0.00 0.00 0.00 2.01
192 193 2.362717 CCCTCGACCATCTCTCTAAACC 59.637 54.545 0.00 0.00 0.00 3.27
193 194 2.033550 CCTCGACCATCTCTCTAAACCG 59.966 54.545 0.00 0.00 0.00 4.44
194 195 2.022195 TCGACCATCTCTCTAAACCGG 58.978 52.381 0.00 0.00 0.00 5.28
195 196 1.536284 CGACCATCTCTCTAAACCGGC 60.536 57.143 0.00 0.00 0.00 6.13
196 197 0.831307 ACCATCTCTCTAAACCGGCC 59.169 55.000 0.00 0.00 0.00 6.13
197 198 0.830648 CCATCTCTCTAAACCGGCCA 59.169 55.000 0.00 0.00 0.00 5.36
198 199 1.209504 CCATCTCTCTAAACCGGCCAA 59.790 52.381 0.00 0.00 0.00 4.52
199 200 2.158755 CCATCTCTCTAAACCGGCCAAT 60.159 50.000 0.00 0.00 0.00 3.16
200 201 2.981859 TCTCTCTAAACCGGCCAATC 57.018 50.000 0.00 0.00 0.00 2.67
201 202 2.184533 TCTCTCTAAACCGGCCAATCA 58.815 47.619 0.00 0.00 0.00 2.57
202 203 2.771943 TCTCTCTAAACCGGCCAATCAT 59.228 45.455 0.00 0.00 0.00 2.45
203 204 3.134458 CTCTCTAAACCGGCCAATCATC 58.866 50.000 0.00 0.00 0.00 2.92
204 205 2.771943 TCTCTAAACCGGCCAATCATCT 59.228 45.455 0.00 0.00 0.00 2.90
205 206 2.874701 CTCTAAACCGGCCAATCATCTG 59.125 50.000 0.00 0.00 0.00 2.90
206 207 2.503765 TCTAAACCGGCCAATCATCTGA 59.496 45.455 0.00 0.00 0.00 3.27
207 208 2.214376 AAACCGGCCAATCATCTGAA 57.786 45.000 0.00 0.00 0.00 3.02
208 209 2.442236 AACCGGCCAATCATCTGAAT 57.558 45.000 0.00 0.00 0.00 2.57
209 210 2.442236 ACCGGCCAATCATCTGAATT 57.558 45.000 0.00 0.00 0.00 2.17
210 211 2.738743 ACCGGCCAATCATCTGAATTT 58.261 42.857 0.00 0.00 0.00 1.82
211 212 3.099141 ACCGGCCAATCATCTGAATTTT 58.901 40.909 0.00 0.00 0.00 1.82
212 213 3.131046 ACCGGCCAATCATCTGAATTTTC 59.869 43.478 0.00 0.00 0.00 2.29
213 214 3.491447 CCGGCCAATCATCTGAATTTTCC 60.491 47.826 2.24 0.00 0.00 3.13
214 215 3.709987 GGCCAATCATCTGAATTTTCCG 58.290 45.455 0.00 0.00 0.00 4.30
215 216 3.381272 GGCCAATCATCTGAATTTTCCGA 59.619 43.478 0.00 0.00 0.00 4.55
216 217 4.354587 GCCAATCATCTGAATTTTCCGAC 58.645 43.478 0.00 0.00 0.00 4.79
217 218 4.591202 CCAATCATCTGAATTTTCCGACG 58.409 43.478 0.00 0.00 0.00 5.12
218 219 4.332543 CCAATCATCTGAATTTTCCGACGA 59.667 41.667 0.00 0.00 0.00 4.20
219 220 5.163764 CCAATCATCTGAATTTTCCGACGAA 60.164 40.000 0.00 0.00 0.00 3.85
220 221 4.921470 TCATCTGAATTTTCCGACGAAC 57.079 40.909 0.00 0.00 0.00 3.95
221 222 3.682858 TCATCTGAATTTTCCGACGAACC 59.317 43.478 0.00 0.00 0.00 3.62
222 223 3.396260 TCTGAATTTTCCGACGAACCT 57.604 42.857 0.00 0.00 0.00 3.50
223 224 3.064207 TCTGAATTTTCCGACGAACCTG 58.936 45.455 0.00 0.00 0.00 4.00
224 225 1.533731 TGAATTTTCCGACGAACCTGC 59.466 47.619 0.00 0.00 0.00 4.85
225 226 1.533731 GAATTTTCCGACGAACCTGCA 59.466 47.619 0.00 0.00 0.00 4.41
226 227 0.872388 ATTTTCCGACGAACCTGCAC 59.128 50.000 0.00 0.00 0.00 4.57
227 228 1.161563 TTTTCCGACGAACCTGCACC 61.162 55.000 0.00 0.00 0.00 5.01
228 229 2.999739 TTTCCGACGAACCTGCACCC 63.000 60.000 0.00 0.00 0.00 4.61
231 232 3.948719 GACGAACCTGCACCCCCA 61.949 66.667 0.00 0.00 0.00 4.96
232 233 4.265056 ACGAACCTGCACCCCCAC 62.265 66.667 0.00 0.00 0.00 4.61
234 235 4.678743 GAACCTGCACCCCCACCC 62.679 72.222 0.00 0.00 0.00 4.61
243 244 4.123545 CCCCCACCCCGAACCATC 62.124 72.222 0.00 0.00 0.00 3.51
244 245 3.334891 CCCCACCCCGAACCATCA 61.335 66.667 0.00 0.00 0.00 3.07
245 246 2.760477 CCCACCCCGAACCATCAA 59.240 61.111 0.00 0.00 0.00 2.57
246 247 1.306296 CCCACCCCGAACCATCAAT 59.694 57.895 0.00 0.00 0.00 2.57
247 248 0.751643 CCCACCCCGAACCATCAATC 60.752 60.000 0.00 0.00 0.00 2.67
248 249 0.255890 CCACCCCGAACCATCAATCT 59.744 55.000 0.00 0.00 0.00 2.40
249 250 1.340991 CCACCCCGAACCATCAATCTT 60.341 52.381 0.00 0.00 0.00 2.40
250 251 2.017049 CACCCCGAACCATCAATCTTC 58.983 52.381 0.00 0.00 0.00 2.87
251 252 1.299541 CCCCGAACCATCAATCTTCG 58.700 55.000 0.00 0.00 37.20 3.79
255 256 2.893637 CGAACCATCAATCTTCGGACT 58.106 47.619 0.00 0.00 34.47 3.85
256 257 2.860735 CGAACCATCAATCTTCGGACTC 59.139 50.000 0.00 0.00 34.47 3.36
257 258 2.586258 ACCATCAATCTTCGGACTCG 57.414 50.000 0.00 0.00 37.82 4.18
258 259 1.212616 CCATCAATCTTCGGACTCGC 58.787 55.000 0.00 0.00 36.13 5.03
259 260 1.212616 CATCAATCTTCGGACTCGCC 58.787 55.000 0.00 0.00 36.13 5.54
260 261 0.105039 ATCAATCTTCGGACTCGCCC 59.895 55.000 0.00 0.00 36.13 6.13
261 262 1.521681 CAATCTTCGGACTCGCCCC 60.522 63.158 0.00 0.00 36.13 5.80
262 263 2.732619 AATCTTCGGACTCGCCCCC 61.733 63.158 0.00 0.00 36.13 5.40
263 264 3.976490 ATCTTCGGACTCGCCCCCA 62.976 63.158 0.00 0.00 36.13 4.96
264 265 4.452733 CTTCGGACTCGCCCCCAC 62.453 72.222 0.00 0.00 36.13 4.61
276 277 4.256180 CCCCACCGGCTATGGCTC 62.256 72.222 0.00 0.00 38.73 4.70
277 278 4.609018 CCCACCGGCTATGGCTCG 62.609 72.222 0.00 2.95 38.73 5.03
278 279 3.849951 CCACCGGCTATGGCTCGT 61.850 66.667 0.00 0.00 38.73 4.18
279 280 2.186903 CACCGGCTATGGCTCGTT 59.813 61.111 0.00 0.00 38.73 3.85
280 281 1.449601 CACCGGCTATGGCTCGTTT 60.450 57.895 0.00 0.00 38.73 3.60
281 282 1.153429 ACCGGCTATGGCTCGTTTC 60.153 57.895 0.00 0.00 38.73 2.78
282 283 1.144057 CCGGCTATGGCTCGTTTCT 59.856 57.895 0.00 0.00 38.73 2.52
283 284 1.154205 CCGGCTATGGCTCGTTTCTG 61.154 60.000 0.00 0.00 38.73 3.02
284 285 1.154205 CGGCTATGGCTCGTTTCTGG 61.154 60.000 0.00 0.00 38.73 3.86
285 286 0.107654 GGCTATGGCTCGTTTCTGGT 60.108 55.000 0.00 0.00 38.73 4.00
286 287 1.138266 GGCTATGGCTCGTTTCTGGTA 59.862 52.381 0.00 0.00 38.73 3.25
287 288 2.474816 GCTATGGCTCGTTTCTGGTAG 58.525 52.381 0.00 0.00 35.22 3.18
288 289 2.100916 GCTATGGCTCGTTTCTGGTAGA 59.899 50.000 0.00 0.00 35.22 2.59
289 290 2.969628 ATGGCTCGTTTCTGGTAGAG 57.030 50.000 0.00 0.00 0.00 2.43
290 291 0.895530 TGGCTCGTTTCTGGTAGAGG 59.104 55.000 0.00 0.00 0.00 3.69
291 292 0.460459 GGCTCGTTTCTGGTAGAGGC 60.460 60.000 2.30 2.30 46.21 4.70
292 293 0.460459 GCTCGTTTCTGGTAGAGGCC 60.460 60.000 0.00 0.00 0.00 5.19
293 294 1.187087 CTCGTTTCTGGTAGAGGCCT 58.813 55.000 3.86 3.86 0.00 5.19
294 295 1.550976 CTCGTTTCTGGTAGAGGCCTT 59.449 52.381 6.77 0.00 0.00 4.35
295 296 1.275291 TCGTTTCTGGTAGAGGCCTTG 59.725 52.381 6.77 0.00 0.00 3.61
296 297 1.275291 CGTTTCTGGTAGAGGCCTTGA 59.725 52.381 6.77 0.00 0.00 3.02
297 298 2.701107 GTTTCTGGTAGAGGCCTTGAC 58.299 52.381 6.77 8.22 0.00 3.18
298 299 0.895530 TTCTGGTAGAGGCCTTGACG 59.104 55.000 6.77 0.00 0.00 4.35
299 300 0.970937 TCTGGTAGAGGCCTTGACGG 60.971 60.000 6.77 3.26 0.00 4.79
300 301 1.229082 TGGTAGAGGCCTTGACGGT 60.229 57.895 6.77 0.00 34.25 4.83
301 302 1.218316 GGTAGAGGCCTTGACGGTG 59.782 63.158 6.77 0.00 34.25 4.94
302 303 1.542187 GGTAGAGGCCTTGACGGTGT 61.542 60.000 6.77 0.00 34.25 4.16
303 304 0.108756 GTAGAGGCCTTGACGGTGTC 60.109 60.000 6.77 0.00 34.25 3.67
304 305 1.255667 TAGAGGCCTTGACGGTGTCC 61.256 60.000 6.77 0.00 34.25 4.02
305 306 3.607370 GAGGCCTTGACGGTGTCCC 62.607 68.421 6.77 0.00 34.25 4.46
306 307 4.717313 GGCCTTGACGGTGTCCCC 62.717 72.222 0.00 0.00 34.25 4.81
328 329 4.456253 CTCGCTACCGCACGTCGT 62.456 66.667 0.00 0.00 36.19 4.34
329 330 4.746951 TCGCTACCGCACGTCGTG 62.747 66.667 21.02 21.02 36.19 4.35
353 354 3.431725 CCAACGCCCGCTTCCTTC 61.432 66.667 0.00 0.00 0.00 3.46
354 355 2.358737 CAACGCCCGCTTCCTTCT 60.359 61.111 0.00 0.00 0.00 2.85
355 356 2.047179 AACGCCCGCTTCCTTCTC 60.047 61.111 0.00 0.00 0.00 2.87
356 357 3.607370 AACGCCCGCTTCCTTCTCC 62.607 63.158 0.00 0.00 0.00 3.71
357 358 4.082523 CGCCCGCTTCCTTCTCCA 62.083 66.667 0.00 0.00 0.00 3.86
358 359 2.436824 GCCCGCTTCCTTCTCCAC 60.437 66.667 0.00 0.00 0.00 4.02
359 360 2.269241 CCCGCTTCCTTCTCCACC 59.731 66.667 0.00 0.00 0.00 4.61
360 361 2.125512 CCGCTTCCTTCTCCACCG 60.126 66.667 0.00 0.00 0.00 4.94
361 362 2.646175 CCGCTTCCTTCTCCACCGA 61.646 63.158 0.00 0.00 0.00 4.69
362 363 1.292223 CGCTTCCTTCTCCACCGAA 59.708 57.895 0.00 0.00 0.00 4.30
363 364 0.108138 CGCTTCCTTCTCCACCGAAT 60.108 55.000 0.00 0.00 0.00 3.34
364 365 1.676014 CGCTTCCTTCTCCACCGAATT 60.676 52.381 0.00 0.00 0.00 2.17
365 366 1.740025 GCTTCCTTCTCCACCGAATTG 59.260 52.381 0.00 0.00 0.00 2.32
366 367 2.615493 GCTTCCTTCTCCACCGAATTGA 60.615 50.000 0.00 0.00 0.00 2.57
367 368 3.674997 CTTCCTTCTCCACCGAATTGAA 58.325 45.455 0.00 0.00 0.00 2.69
368 369 3.053831 TCCTTCTCCACCGAATTGAAC 57.946 47.619 0.00 0.00 0.00 3.18
369 370 1.732259 CCTTCTCCACCGAATTGAACG 59.268 52.381 0.00 0.00 0.00 3.95
375 376 3.674906 CCGAATTGAACGGCCCAA 58.325 55.556 0.00 0.00 43.74 4.12
376 377 1.960612 CCGAATTGAACGGCCCAAA 59.039 52.632 0.00 0.00 43.74 3.28
377 378 0.530288 CCGAATTGAACGGCCCAAAT 59.470 50.000 0.00 0.00 43.74 2.32
378 379 1.067213 CCGAATTGAACGGCCCAAATT 60.067 47.619 0.00 0.00 43.74 1.82
379 380 2.258755 CGAATTGAACGGCCCAAATTC 58.741 47.619 13.31 13.31 0.00 2.17
380 381 2.258755 GAATTGAACGGCCCAAATTCG 58.741 47.619 0.00 0.00 0.00 3.34
381 382 1.540267 ATTGAACGGCCCAAATTCGA 58.460 45.000 0.00 0.00 0.00 3.71
382 383 1.319541 TTGAACGGCCCAAATTCGAA 58.680 45.000 0.00 0.00 0.00 3.71
383 384 1.319541 TGAACGGCCCAAATTCGAAA 58.680 45.000 0.00 0.00 0.00 3.46
384 385 1.889829 TGAACGGCCCAAATTCGAAAT 59.110 42.857 0.00 0.00 0.00 2.17
385 386 2.094957 TGAACGGCCCAAATTCGAAATC 60.095 45.455 0.00 0.00 0.00 2.17
386 387 0.815095 ACGGCCCAAATTCGAAATCC 59.185 50.000 0.00 0.00 0.00 3.01
387 388 0.814457 CGGCCCAAATTCGAAATCCA 59.186 50.000 0.00 0.00 0.00 3.41
388 389 1.202290 CGGCCCAAATTCGAAATCCAG 60.202 52.381 0.00 0.00 0.00 3.86
389 390 1.136891 GGCCCAAATTCGAAATCCAGG 59.863 52.381 0.00 0.91 0.00 4.45
390 391 1.824852 GCCCAAATTCGAAATCCAGGT 59.175 47.619 0.00 0.00 0.00 4.00
391 392 2.159240 GCCCAAATTCGAAATCCAGGTC 60.159 50.000 0.00 0.00 0.00 3.85
392 393 3.088532 CCCAAATTCGAAATCCAGGTCA 58.911 45.455 0.00 0.00 0.00 4.02
393 394 3.119495 CCCAAATTCGAAATCCAGGTCAC 60.119 47.826 0.00 0.00 0.00 3.67
394 395 3.758554 CCAAATTCGAAATCCAGGTCACT 59.241 43.478 0.00 0.00 0.00 3.41
395 396 4.941263 CCAAATTCGAAATCCAGGTCACTA 59.059 41.667 0.00 0.00 0.00 2.74
396 397 5.414454 CCAAATTCGAAATCCAGGTCACTAA 59.586 40.000 0.00 0.00 0.00 2.24
397 398 6.095440 CCAAATTCGAAATCCAGGTCACTAAT 59.905 38.462 0.00 0.00 0.00 1.73
398 399 6.683974 AATTCGAAATCCAGGTCACTAATG 57.316 37.500 0.00 0.00 0.00 1.90
399 400 4.819105 TCGAAATCCAGGTCACTAATGT 57.181 40.909 0.00 0.00 0.00 2.71
400 401 4.755411 TCGAAATCCAGGTCACTAATGTC 58.245 43.478 0.00 0.00 0.00 3.06
401 402 3.871594 CGAAATCCAGGTCACTAATGTCC 59.128 47.826 0.00 0.00 34.50 4.02
402 403 4.622933 CGAAATCCAGGTCACTAATGTCCA 60.623 45.833 0.00 0.00 36.56 4.02
403 404 4.494091 AATCCAGGTCACTAATGTCCAG 57.506 45.455 0.00 0.00 36.56 3.86
404 405 1.555075 TCCAGGTCACTAATGTCCAGC 59.445 52.381 0.00 0.00 36.56 4.85
405 406 1.278985 CCAGGTCACTAATGTCCAGCA 59.721 52.381 0.00 0.00 36.56 4.41
406 407 2.290260 CCAGGTCACTAATGTCCAGCAA 60.290 50.000 0.00 0.00 36.56 3.91
407 408 3.411446 CAGGTCACTAATGTCCAGCAAA 58.589 45.455 0.00 0.00 36.56 3.68
408 409 4.012374 CAGGTCACTAATGTCCAGCAAAT 58.988 43.478 0.00 0.00 36.56 2.32
409 410 4.095483 CAGGTCACTAATGTCCAGCAAATC 59.905 45.833 0.00 0.00 36.56 2.17
410 411 4.018960 AGGTCACTAATGTCCAGCAAATCT 60.019 41.667 0.00 0.00 36.56 2.40
411 412 4.095483 GGTCACTAATGTCCAGCAAATCTG 59.905 45.833 0.00 0.00 42.49 2.90
412 413 4.937620 GTCACTAATGTCCAGCAAATCTGA 59.062 41.667 0.00 0.00 45.72 3.27
413 414 5.587844 GTCACTAATGTCCAGCAAATCTGAT 59.412 40.000 0.00 0.00 45.72 2.90
414 415 6.763135 GTCACTAATGTCCAGCAAATCTGATA 59.237 38.462 0.00 0.00 45.72 2.15
415 416 6.763135 TCACTAATGTCCAGCAAATCTGATAC 59.237 38.462 0.00 0.00 45.72 2.24
416 417 6.765036 CACTAATGTCCAGCAAATCTGATACT 59.235 38.462 0.00 0.00 45.72 2.12
417 418 7.928167 CACTAATGTCCAGCAAATCTGATACTA 59.072 37.037 0.00 0.00 45.72 1.82
418 419 8.486210 ACTAATGTCCAGCAAATCTGATACTAA 58.514 33.333 0.00 0.00 45.72 2.24
419 420 9.499479 CTAATGTCCAGCAAATCTGATACTAAT 57.501 33.333 0.00 0.00 45.72 1.73
423 424 9.851686 TGTCCAGCAAATCTGATACTAATATTT 57.148 29.630 0.00 0.00 45.72 1.40
472 473 7.069852 CATCTAGATGTGCCATAAGTATTGC 57.930 40.000 22.42 0.00 34.23 3.56
473 474 6.173427 TCTAGATGTGCCATAAGTATTGCA 57.827 37.500 0.00 0.00 32.69 4.08
481 482 6.866010 TGCCATAAGTATTGCACATCTAAG 57.134 37.500 0.00 0.00 30.49 2.18
482 483 6.356556 TGCCATAAGTATTGCACATCTAAGT 58.643 36.000 0.00 0.00 30.49 2.24
483 484 6.483307 TGCCATAAGTATTGCACATCTAAGTC 59.517 38.462 0.00 0.00 30.49 3.01
484 485 6.483307 GCCATAAGTATTGCACATCTAAGTCA 59.517 38.462 0.00 0.00 0.00 3.41
485 486 7.173907 GCCATAAGTATTGCACATCTAAGTCAT 59.826 37.037 0.00 0.00 0.00 3.06
486 487 9.710900 CCATAAGTATTGCACATCTAAGTCATA 57.289 33.333 0.00 0.00 0.00 2.15
513 514 8.899427 ATCATTGATCTTACATTGAGATTCGT 57.101 30.769 0.00 0.00 34.13 3.85
514 515 8.134905 TCATTGATCTTACATTGAGATTCGTG 57.865 34.615 0.00 0.00 34.13 4.35
515 516 7.765819 TCATTGATCTTACATTGAGATTCGTGT 59.234 33.333 0.00 0.00 34.13 4.49
516 517 6.892310 TGATCTTACATTGAGATTCGTGTG 57.108 37.500 0.00 0.00 34.13 3.82
517 518 6.630071 TGATCTTACATTGAGATTCGTGTGA 58.370 36.000 0.00 0.00 34.13 3.58
518 519 7.096551 TGATCTTACATTGAGATTCGTGTGAA 58.903 34.615 0.00 0.00 38.76 3.18
520 521 9.249457 GATCTTACATTGAGATTCGTGTGAATA 57.751 33.333 0.00 0.00 44.79 1.75
521 522 9.770097 ATCTTACATTGAGATTCGTGTGAATAT 57.230 29.630 0.00 0.00 44.79 1.28
522 523 9.599866 TCTTACATTGAGATTCGTGTGAATATT 57.400 29.630 0.00 0.00 44.79 1.28
526 527 8.950210 ACATTGAGATTCGTGTGAATATTTTCT 58.050 29.630 0.00 0.00 44.79 2.52
527 528 9.778993 CATTGAGATTCGTGTGAATATTTTCTT 57.221 29.630 0.00 0.00 44.79 2.52
529 530 9.825972 TTGAGATTCGTGTGAATATTTTCTTTC 57.174 29.630 0.00 0.00 44.79 2.62
530 531 9.219603 TGAGATTCGTGTGAATATTTTCTTTCT 57.780 29.630 0.00 0.00 44.79 2.52
531 532 9.695884 GAGATTCGTGTGAATATTTTCTTTCTC 57.304 33.333 0.00 0.00 44.79 2.87
532 533 9.442047 AGATTCGTGTGAATATTTTCTTTCTCT 57.558 29.630 0.00 0.00 44.79 3.10
549 550 9.956720 TTCTTTCTCTTTTTCTCTTTATGCTTG 57.043 29.630 0.00 0.00 0.00 4.01
550 551 9.342308 TCTTTCTCTTTTTCTCTTTATGCTTGA 57.658 29.630 0.00 0.00 0.00 3.02
554 555 9.288576 TCTCTTTTTCTCTTTATGCTTGATTCA 57.711 29.630 0.00 0.00 0.00 2.57
555 556 9.339492 CTCTTTTTCTCTTTATGCTTGATTCAC 57.661 33.333 0.00 0.00 0.00 3.18
556 557 9.071276 TCTTTTTCTCTTTATGCTTGATTCACT 57.929 29.630 0.00 0.00 0.00 3.41
557 558 9.339492 CTTTTTCTCTTTATGCTTGATTCACTC 57.661 33.333 0.00 0.00 0.00 3.51
558 559 7.984422 TTTCTCTTTATGCTTGATTCACTCA 57.016 32.000 0.00 0.00 0.00 3.41
559 560 6.974932 TCTCTTTATGCTTGATTCACTCAC 57.025 37.500 0.00 0.00 32.17 3.51
560 561 6.705302 TCTCTTTATGCTTGATTCACTCACT 58.295 36.000 0.00 0.00 32.17 3.41
561 562 7.164122 TCTCTTTATGCTTGATTCACTCACTT 58.836 34.615 0.00 0.00 32.17 3.16
562 563 8.314021 TCTCTTTATGCTTGATTCACTCACTTA 58.686 33.333 0.00 0.00 32.17 2.24
563 564 8.484641 TCTTTATGCTTGATTCACTCACTTAG 57.515 34.615 0.00 0.00 32.17 2.18
564 565 8.314021 TCTTTATGCTTGATTCACTCACTTAGA 58.686 33.333 0.00 0.00 32.17 2.10
565 566 9.107177 CTTTATGCTTGATTCACTCACTTAGAT 57.893 33.333 0.00 0.00 32.17 1.98
566 567 6.922247 ATGCTTGATTCACTCACTTAGATG 57.078 37.500 0.00 0.00 32.17 2.90
567 568 5.798132 TGCTTGATTCACTCACTTAGATGT 58.202 37.500 0.00 0.00 32.17 3.06
568 569 5.640783 TGCTTGATTCACTCACTTAGATGTG 59.359 40.000 0.00 0.00 39.15 3.21
569 570 5.447010 GCTTGATTCACTCACTTAGATGTGC 60.447 44.000 0.00 0.00 37.81 4.57
570 571 5.151297 TGATTCACTCACTTAGATGTGCA 57.849 39.130 0.00 0.00 37.81 4.57
571 572 5.550290 TGATTCACTCACTTAGATGTGCAA 58.450 37.500 0.00 0.00 37.81 4.08
572 573 6.175471 TGATTCACTCACTTAGATGTGCAAT 58.825 36.000 0.00 0.00 37.81 3.56
573 574 7.330262 TGATTCACTCACTTAGATGTGCAATA 58.670 34.615 0.00 0.00 37.81 1.90
574 575 7.823799 TGATTCACTCACTTAGATGTGCAATAA 59.176 33.333 0.00 0.00 37.81 1.40
575 576 8.743085 ATTCACTCACTTAGATGTGCAATAAT 57.257 30.769 0.00 0.00 37.81 1.28
576 577 8.565896 TTCACTCACTTAGATGTGCAATAATT 57.434 30.769 0.00 0.00 37.81 1.40
577 578 9.665719 TTCACTCACTTAGATGTGCAATAATTA 57.334 29.630 0.00 0.00 37.81 1.40
578 579 9.665719 TCACTCACTTAGATGTGCAATAATTAA 57.334 29.630 0.00 0.00 37.81 1.40
600 601 9.950496 ATTAAAACATATCTAGATGTGGCCTAG 57.050 33.333 27.15 7.38 39.99 3.02
601 602 7.618019 AAAACATATCTAGATGTGGCCTAGA 57.382 36.000 27.15 2.20 44.50 2.43
602 603 6.597832 AACATATCTAGATGTGGCCTAGAC 57.402 41.667 27.15 0.00 43.57 2.59
603 604 5.645201 ACATATCTAGATGTGGCCTAGACA 58.355 41.667 27.15 0.00 43.57 3.41
604 605 5.478679 ACATATCTAGATGTGGCCTAGACAC 59.521 44.000 27.15 9.72 43.57 3.67
750 751 3.182972 CCGATCAAGCAAGCAAACAAAAG 59.817 43.478 0.00 0.00 0.00 2.27
912 914 0.322098 ATCGCGTCCATTTCCCACAA 60.322 50.000 5.77 0.00 0.00 3.33
913 915 1.209127 CGCGTCCATTTCCCACAAC 59.791 57.895 0.00 0.00 0.00 3.32
914 916 1.584495 GCGTCCATTTCCCACAACC 59.416 57.895 0.00 0.00 0.00 3.77
915 917 1.873270 GCGTCCATTTCCCACAACCC 61.873 60.000 0.00 0.00 0.00 4.11
916 918 0.538516 CGTCCATTTCCCACAACCCA 60.539 55.000 0.00 0.00 0.00 4.51
917 919 1.710816 GTCCATTTCCCACAACCCAA 58.289 50.000 0.00 0.00 0.00 4.12
918 920 1.343142 GTCCATTTCCCACAACCCAAC 59.657 52.381 0.00 0.00 0.00 3.77
919 921 1.219213 TCCATTTCCCACAACCCAACT 59.781 47.619 0.00 0.00 0.00 3.16
920 922 1.618343 CCATTTCCCACAACCCAACTC 59.382 52.381 0.00 0.00 0.00 3.01
921 923 2.597455 CATTTCCCACAACCCAACTCT 58.403 47.619 0.00 0.00 0.00 3.24
922 924 2.065899 TTTCCCACAACCCAACTCTG 57.934 50.000 0.00 0.00 0.00 3.35
923 925 0.467290 TTCCCACAACCCAACTCTGC 60.467 55.000 0.00 0.00 0.00 4.26
924 926 1.152777 CCCACAACCCAACTCTGCA 60.153 57.895 0.00 0.00 0.00 4.41
925 927 0.754957 CCCACAACCCAACTCTGCAA 60.755 55.000 0.00 0.00 0.00 4.08
926 928 1.110442 CCACAACCCAACTCTGCAAA 58.890 50.000 0.00 0.00 0.00 3.68
929 931 1.608590 ACAACCCAACTCTGCAAATCG 59.391 47.619 0.00 0.00 0.00 3.34
1206 1246 3.633116 AAGGTGTTCCGGTCGGGG 61.633 66.667 9.68 0.00 39.05 5.73
1415 1455 1.202154 CGGCTACGTCTTCTTCATCGT 60.202 52.381 0.00 0.00 39.74 3.73
1495 1544 1.074850 GAGGGGAAGGAGGAGGAGG 60.075 68.421 0.00 0.00 0.00 4.30
1496 1545 1.550374 AGGGGAAGGAGGAGGAGGA 60.550 63.158 0.00 0.00 0.00 3.71
1497 1546 1.074850 GGGGAAGGAGGAGGAGGAG 60.075 68.421 0.00 0.00 0.00 3.69
1695 1744 3.978723 CTGGCCGTCGTGAGCTGAG 62.979 68.421 0.00 0.00 0.00 3.35
1707 1756 2.010582 GAGCTGAGCTCGGTCGGATT 62.011 60.000 19.71 3.35 45.85 3.01
1736 1785 1.717194 TTTCGACCGGCAAGATGTAC 58.283 50.000 0.00 0.00 0.00 2.90
1737 1786 0.892755 TTCGACCGGCAAGATGTACT 59.107 50.000 0.00 0.00 0.00 2.73
1738 1787 1.753930 TCGACCGGCAAGATGTACTA 58.246 50.000 0.00 0.00 0.00 1.82
1779 1828 7.042523 GCTTACCGCGTTAATTATTTTCTCCTA 60.043 37.037 4.92 0.00 0.00 2.94
1780 1829 8.891671 TTACCGCGTTAATTATTTTCTCCTAT 57.108 30.769 4.92 0.00 0.00 2.57
1781 1830 7.797038 ACCGCGTTAATTATTTTCTCCTATT 57.203 32.000 4.92 0.00 0.00 1.73
1796 1845 9.582431 TTTTCTCCTATTATTACGAGACTGTTG 57.418 33.333 0.00 0.00 31.26 3.33
2033 2112 5.119743 GGTCAATAATTACTTCGGCGGATAC 59.880 44.000 7.21 0.00 0.00 2.24
2036 2115 2.150397 ATTACTTCGGCGGATACTGC 57.850 50.000 7.21 0.00 35.76 4.40
2041 2120 0.804544 TTCGGCGGATACTGCTTTCG 60.805 55.000 7.21 0.00 36.55 3.46
2044 2123 1.813753 GCGGATACTGCTTTCGCCA 60.814 57.895 0.00 0.00 40.44 5.69
2058 2137 4.320202 GCTTTCGCCAAAACATCAACTAGA 60.320 41.667 0.00 0.00 0.00 2.43
2092 2171 0.748005 CCGAATCACCCGAAATGCCT 60.748 55.000 0.00 0.00 0.00 4.75
2093 2172 0.378257 CGAATCACCCGAAATGCCTG 59.622 55.000 0.00 0.00 0.00 4.85
2094 2173 0.101219 GAATCACCCGAAATGCCTGC 59.899 55.000 0.00 0.00 0.00 4.85
2095 2174 1.322538 AATCACCCGAAATGCCTGCC 61.323 55.000 0.00 0.00 0.00 4.85
2096 2175 2.497792 ATCACCCGAAATGCCTGCCA 62.498 55.000 0.00 0.00 0.00 4.92
2109 2189 2.741985 TGCCAAGGCGTCGTCATG 60.742 61.111 6.60 0.00 45.51 3.07
2121 2201 0.324368 TCGTCATGTCTAGGCCAGGT 60.324 55.000 5.01 0.00 0.00 4.00
2188 2268 2.668632 GCCATCACGACCTCCCAA 59.331 61.111 0.00 0.00 0.00 4.12
2381 2461 4.446719 GCATTTTCCAACAAAGCAGAAGAG 59.553 41.667 0.00 0.00 0.00 2.85
2391 2471 1.461559 AGCAGAAGAGCAAATCAGCC 58.538 50.000 0.00 0.00 36.85 4.85
2427 2601 4.801516 TGCTTCGCTTTTGTTTTTACTTCC 59.198 37.500 0.00 0.00 0.00 3.46
2448 2622 5.901552 TCCTTTGGTGTTTCATTTCTGAAC 58.098 37.500 0.00 0.00 41.05 3.18
2469 2759 5.994887 ACAAACAATTTACGCAGTAGACA 57.005 34.783 0.00 0.00 46.93 3.41
2485 2777 7.166638 CGCAGTAGACAAGAACACAATCTATAG 59.833 40.741 0.00 0.00 0.00 1.31
2486 2778 7.043059 GCAGTAGACAAGAACACAATCTATAGC 60.043 40.741 0.00 0.00 0.00 2.97
2493 2785 4.890581 AGAACACAATCTATAGCCGAGACT 59.109 41.667 0.00 0.00 0.00 3.24
2514 2807 9.862371 GAGACTGAAATCTTTACATCTAAGACA 57.138 33.333 0.00 0.00 34.68 3.41
2529 2822 0.807667 AGACATTAGGCTTCGCGCTG 60.808 55.000 5.56 0.00 39.13 5.18
2664 2969 2.102252 ACATAGCCTAGCAAGAGTCTGC 59.898 50.000 0.00 0.00 42.97 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.146066 CAGGAGGTAGAAGGAGATCTCG 58.854 54.545 16.46 0.00 0.00 4.04
1 2 4.447138 TCAGGAGGTAGAAGGAGATCTC 57.553 50.000 14.75 14.75 0.00 2.75
3 4 5.683770 GCTTTTCAGGAGGTAGAAGGAGATC 60.684 48.000 0.00 0.00 0.00 2.75
4 5 4.163268 GCTTTTCAGGAGGTAGAAGGAGAT 59.837 45.833 0.00 0.00 0.00 2.75
6 7 3.261897 TGCTTTTCAGGAGGTAGAAGGAG 59.738 47.826 0.00 0.00 0.00 3.69
7 8 3.248024 TGCTTTTCAGGAGGTAGAAGGA 58.752 45.455 0.00 0.00 0.00 3.36
8 9 3.703001 TGCTTTTCAGGAGGTAGAAGG 57.297 47.619 0.00 0.00 0.00 3.46
9 10 3.868077 CGATGCTTTTCAGGAGGTAGAAG 59.132 47.826 0.00 0.00 0.00 2.85
10 11 3.260884 ACGATGCTTTTCAGGAGGTAGAA 59.739 43.478 0.00 0.00 0.00 2.10
11 12 2.832129 ACGATGCTTTTCAGGAGGTAGA 59.168 45.455 0.00 0.00 0.00 2.59
12 13 3.252974 ACGATGCTTTTCAGGAGGTAG 57.747 47.619 0.00 0.00 0.00 3.18
13 14 3.007506 TGAACGATGCTTTTCAGGAGGTA 59.992 43.478 0.00 0.00 0.00 3.08
14 15 2.224523 TGAACGATGCTTTTCAGGAGGT 60.225 45.455 0.00 0.00 0.00 3.85
15 16 2.426522 TGAACGATGCTTTTCAGGAGG 58.573 47.619 0.00 0.00 0.00 4.30
16 17 3.242220 CGATGAACGATGCTTTTCAGGAG 60.242 47.826 0.00 0.00 45.77 3.69
17 18 2.672874 CGATGAACGATGCTTTTCAGGA 59.327 45.455 0.00 0.00 45.77 3.86
18 19 2.416547 ACGATGAACGATGCTTTTCAGG 59.583 45.455 0.00 0.00 45.77 3.86
19 20 3.369147 AGACGATGAACGATGCTTTTCAG 59.631 43.478 0.00 0.00 45.77 3.02
20 21 3.325870 AGACGATGAACGATGCTTTTCA 58.674 40.909 0.00 0.00 45.77 2.69
21 22 3.999229 AGACGATGAACGATGCTTTTC 57.001 42.857 0.00 0.00 45.77 2.29
22 23 4.378459 GGAAAGACGATGAACGATGCTTTT 60.378 41.667 0.00 0.00 45.77 2.27
23 24 3.125316 GGAAAGACGATGAACGATGCTTT 59.875 43.478 0.00 0.00 45.77 3.51
24 25 2.673368 GGAAAGACGATGAACGATGCTT 59.327 45.455 0.00 0.00 45.77 3.91
25 26 2.271800 GGAAAGACGATGAACGATGCT 58.728 47.619 0.00 0.00 45.77 3.79
26 27 1.327764 GGGAAAGACGATGAACGATGC 59.672 52.381 0.00 0.00 45.77 3.91
27 28 2.616960 TGGGAAAGACGATGAACGATG 58.383 47.619 0.00 0.00 45.77 3.84
28 29 3.118775 TCATGGGAAAGACGATGAACGAT 60.119 43.478 0.00 0.00 45.77 3.73
29 30 2.232696 TCATGGGAAAGACGATGAACGA 59.767 45.455 0.00 0.00 45.77 3.85
31 32 4.446371 AGATCATGGGAAAGACGATGAAC 58.554 43.478 0.00 0.00 0.00 3.18
32 33 4.162131 TGAGATCATGGGAAAGACGATGAA 59.838 41.667 0.00 0.00 0.00 2.57
33 34 3.706086 TGAGATCATGGGAAAGACGATGA 59.294 43.478 0.00 0.00 0.00 2.92
34 35 4.063998 TGAGATCATGGGAAAGACGATG 57.936 45.455 0.00 0.00 0.00 3.84
35 36 4.163078 ACTTGAGATCATGGGAAAGACGAT 59.837 41.667 0.00 0.00 0.00 3.73
36 37 3.515502 ACTTGAGATCATGGGAAAGACGA 59.484 43.478 0.00 0.00 0.00 4.20
37 38 3.866651 ACTTGAGATCATGGGAAAGACG 58.133 45.455 0.00 0.00 0.00 4.18
38 39 5.248640 TCAACTTGAGATCATGGGAAAGAC 58.751 41.667 0.00 0.00 0.00 3.01
39 40 5.503634 TCAACTTGAGATCATGGGAAAGA 57.496 39.130 0.00 0.00 0.00 2.52
40 41 5.709164 AGTTCAACTTGAGATCATGGGAAAG 59.291 40.000 0.00 0.00 0.00 2.62
41 42 5.474532 CAGTTCAACTTGAGATCATGGGAAA 59.525 40.000 0.00 0.00 0.00 3.13
42 43 5.005740 CAGTTCAACTTGAGATCATGGGAA 58.994 41.667 0.00 2.25 0.00 3.97
43 44 4.582869 CAGTTCAACTTGAGATCATGGGA 58.417 43.478 0.00 0.00 0.00 4.37
44 45 3.128242 GCAGTTCAACTTGAGATCATGGG 59.872 47.826 0.00 0.00 0.00 4.00
45 46 3.128242 GGCAGTTCAACTTGAGATCATGG 59.872 47.826 0.00 0.00 0.00 3.66
46 47 3.128242 GGGCAGTTCAACTTGAGATCATG 59.872 47.826 0.00 0.00 0.00 3.07
47 48 3.245016 TGGGCAGTTCAACTTGAGATCAT 60.245 43.478 0.00 0.00 0.00 2.45
48 49 2.106338 TGGGCAGTTCAACTTGAGATCA 59.894 45.455 0.00 0.00 0.00 2.92
49 50 2.485814 GTGGGCAGTTCAACTTGAGATC 59.514 50.000 0.00 0.00 0.00 2.75
50 51 2.508526 GTGGGCAGTTCAACTTGAGAT 58.491 47.619 0.00 0.00 0.00 2.75
51 52 1.810031 CGTGGGCAGTTCAACTTGAGA 60.810 52.381 0.00 0.00 0.00 3.27
52 53 0.588252 CGTGGGCAGTTCAACTTGAG 59.412 55.000 0.00 0.00 0.00 3.02
53 54 0.179234 TCGTGGGCAGTTCAACTTGA 59.821 50.000 0.00 0.00 0.00 3.02
54 55 1.197721 GATCGTGGGCAGTTCAACTTG 59.802 52.381 0.00 0.00 0.00 3.16
55 56 1.523758 GATCGTGGGCAGTTCAACTT 58.476 50.000 0.00 0.00 0.00 2.66
56 57 0.670546 CGATCGTGGGCAGTTCAACT 60.671 55.000 7.03 0.00 0.00 3.16
57 58 1.787847 CGATCGTGGGCAGTTCAAC 59.212 57.895 7.03 0.00 0.00 3.18
58 59 2.032634 GCGATCGTGGGCAGTTCAA 61.033 57.895 17.81 0.00 0.00 2.69
59 60 2.434185 GCGATCGTGGGCAGTTCA 60.434 61.111 17.81 0.00 0.00 3.18
60 61 3.195698 GGCGATCGTGGGCAGTTC 61.196 66.667 17.81 0.00 0.00 3.01
83 84 2.357517 CGACAGAAGCAGGCGGTT 60.358 61.111 0.00 0.00 34.95 4.44
87 88 4.704833 TGGGCGACAGAAGCAGGC 62.705 66.667 0.00 0.00 36.08 4.85
88 89 2.743928 GTGGGCGACAGAAGCAGG 60.744 66.667 0.00 0.00 36.08 4.85
89 90 3.114616 CGTGGGCGACAGAAGCAG 61.115 66.667 0.00 0.00 41.33 4.24
90 91 4.680237 CCGTGGGCGACAGAAGCA 62.680 66.667 0.00 0.00 41.33 3.91
91 92 4.681978 ACCGTGGGCGACAGAAGC 62.682 66.667 0.00 0.00 41.33 3.86
92 93 2.432628 GACCGTGGGCGACAGAAG 60.433 66.667 0.00 0.00 41.33 2.85
93 94 4.351938 CGACCGTGGGCGACAGAA 62.352 66.667 8.91 0.00 41.33 3.02
106 107 4.415332 TCAAGAGCGTCGCCGACC 62.415 66.667 14.86 4.63 35.63 4.79
107 108 2.876645 CTCAAGAGCGTCGCCGAC 60.877 66.667 14.86 7.29 35.63 4.79
108 109 3.053896 TCTCAAGAGCGTCGCCGA 61.054 61.111 14.86 4.87 35.63 5.54
109 110 2.876645 GTCTCAAGAGCGTCGCCG 60.877 66.667 14.86 0.01 37.07 6.46
110 111 2.507324 GGTCTCAAGAGCGTCGCC 60.507 66.667 14.86 5.55 32.58 5.54
116 117 2.125350 CCAGGCGGTCTCAAGAGC 60.125 66.667 0.00 0.00 39.04 4.09
117 118 2.125350 GCCAGGCGGTCTCAAGAG 60.125 66.667 0.00 0.00 33.28 2.85
118 119 3.706373 GGCCAGGCGGTCTCAAGA 61.706 66.667 5.00 0.00 32.39 3.02
141 142 4.791069 TGACGGTAGGGGGAGGGC 62.791 72.222 0.00 0.00 0.00 5.19
142 143 2.140792 CATGACGGTAGGGGGAGGG 61.141 68.421 0.00 0.00 0.00 4.30
143 144 2.808206 GCATGACGGTAGGGGGAGG 61.808 68.421 0.00 0.00 0.00 4.30
144 145 1.338136 AAGCATGACGGTAGGGGGAG 61.338 60.000 0.00 0.00 0.00 4.30
145 146 0.912487 AAAGCATGACGGTAGGGGGA 60.912 55.000 0.00 0.00 0.00 4.81
146 147 0.463833 GAAAGCATGACGGTAGGGGG 60.464 60.000 0.00 0.00 0.00 5.40
147 148 0.463833 GGAAAGCATGACGGTAGGGG 60.464 60.000 0.00 0.00 0.00 4.79
148 149 0.810031 CGGAAAGCATGACGGTAGGG 60.810 60.000 0.00 0.00 0.00 3.53
149 150 0.108329 ACGGAAAGCATGACGGTAGG 60.108 55.000 0.00 0.00 0.00 3.18
150 151 1.278238 GACGGAAAGCATGACGGTAG 58.722 55.000 0.00 0.00 0.00 3.18
151 152 0.457166 CGACGGAAAGCATGACGGTA 60.457 55.000 0.00 0.00 0.00 4.02
152 153 1.736645 CGACGGAAAGCATGACGGT 60.737 57.895 0.00 0.00 0.00 4.83
153 154 3.081133 CGACGGAAAGCATGACGG 58.919 61.111 0.00 0.00 0.00 4.79
154 155 2.395690 GCGACGGAAAGCATGACG 59.604 61.111 0.00 0.00 0.00 4.35
155 156 2.750888 GGGCGACGGAAAGCATGAC 61.751 63.158 0.00 0.00 34.54 3.06
156 157 2.435938 GGGCGACGGAAAGCATGA 60.436 61.111 0.00 0.00 34.54 3.07
157 158 2.436646 AGGGCGACGGAAAGCATG 60.437 61.111 0.00 0.00 34.54 4.06
158 159 2.125106 GAGGGCGACGGAAAGCAT 60.125 61.111 0.00 0.00 34.54 3.79
159 160 4.735132 CGAGGGCGACGGAAAGCA 62.735 66.667 0.00 0.00 40.82 3.91
160 161 4.430765 TCGAGGGCGACGGAAAGC 62.431 66.667 0.00 0.00 42.51 3.51
168 169 1.824329 GAGAGATGGTCGAGGGCGA 60.824 63.158 0.00 0.00 45.71 5.54
169 170 0.535328 TAGAGAGATGGTCGAGGGCG 60.535 60.000 0.00 0.00 39.35 6.13
170 171 1.693627 TTAGAGAGATGGTCGAGGGC 58.306 55.000 0.00 0.00 0.00 5.19
171 172 2.362717 GGTTTAGAGAGATGGTCGAGGG 59.637 54.545 0.00 0.00 0.00 4.30
172 173 2.033550 CGGTTTAGAGAGATGGTCGAGG 59.966 54.545 0.00 0.00 0.00 4.63
173 174 2.033550 CCGGTTTAGAGAGATGGTCGAG 59.966 54.545 0.00 0.00 0.00 4.04
174 175 2.022195 CCGGTTTAGAGAGATGGTCGA 58.978 52.381 0.00 0.00 0.00 4.20
175 176 1.536284 GCCGGTTTAGAGAGATGGTCG 60.536 57.143 1.90 0.00 0.00 4.79
176 177 1.202545 GGCCGGTTTAGAGAGATGGTC 60.203 57.143 1.90 0.00 0.00 4.02
177 178 0.831307 GGCCGGTTTAGAGAGATGGT 59.169 55.000 1.90 0.00 0.00 3.55
178 179 0.830648 TGGCCGGTTTAGAGAGATGG 59.169 55.000 1.90 0.00 0.00 3.51
179 180 2.691409 TTGGCCGGTTTAGAGAGATG 57.309 50.000 1.90 0.00 0.00 2.90
180 181 2.771943 TGATTGGCCGGTTTAGAGAGAT 59.228 45.455 1.90 0.00 0.00 2.75
181 182 2.184533 TGATTGGCCGGTTTAGAGAGA 58.815 47.619 1.90 0.00 0.00 3.10
182 183 2.691409 TGATTGGCCGGTTTAGAGAG 57.309 50.000 1.90 0.00 0.00 3.20
183 184 2.771943 AGATGATTGGCCGGTTTAGAGA 59.228 45.455 1.90 0.00 0.00 3.10
184 185 2.874701 CAGATGATTGGCCGGTTTAGAG 59.125 50.000 1.90 0.00 0.00 2.43
185 186 2.503765 TCAGATGATTGGCCGGTTTAGA 59.496 45.455 1.90 0.00 0.00 2.10
186 187 2.917933 TCAGATGATTGGCCGGTTTAG 58.082 47.619 1.90 0.00 0.00 1.85
187 188 3.358111 TTCAGATGATTGGCCGGTTTA 57.642 42.857 1.90 0.00 0.00 2.01
188 189 2.214376 TTCAGATGATTGGCCGGTTT 57.786 45.000 1.90 0.00 0.00 3.27
189 190 2.442236 ATTCAGATGATTGGCCGGTT 57.558 45.000 1.90 0.00 0.00 4.44
190 191 2.442236 AATTCAGATGATTGGCCGGT 57.558 45.000 1.90 0.00 0.00 5.28
191 192 3.491447 GGAAAATTCAGATGATTGGCCGG 60.491 47.826 0.00 0.00 0.00 6.13
192 193 3.709987 GGAAAATTCAGATGATTGGCCG 58.290 45.455 0.00 0.00 0.00 6.13
193 194 3.381272 TCGGAAAATTCAGATGATTGGCC 59.619 43.478 0.00 0.00 0.00 5.36
194 195 4.354587 GTCGGAAAATTCAGATGATTGGC 58.645 43.478 0.00 0.00 34.10 4.52
195 196 4.332543 TCGTCGGAAAATTCAGATGATTGG 59.667 41.667 12.28 0.00 40.70 3.16
196 197 5.469373 TCGTCGGAAAATTCAGATGATTG 57.531 39.130 12.28 0.00 40.70 2.67
197 198 5.163754 GGTTCGTCGGAAAATTCAGATGATT 60.164 40.000 15.62 0.00 43.47 2.57
198 199 4.332819 GGTTCGTCGGAAAATTCAGATGAT 59.667 41.667 15.62 0.00 43.47 2.45
199 200 3.682858 GGTTCGTCGGAAAATTCAGATGA 59.317 43.478 12.28 12.28 42.74 2.92
200 201 3.684788 AGGTTCGTCGGAAAATTCAGATG 59.315 43.478 8.61 8.61 38.99 2.90
201 202 3.684788 CAGGTTCGTCGGAAAATTCAGAT 59.315 43.478 0.00 0.00 34.10 2.90
202 203 3.064207 CAGGTTCGTCGGAAAATTCAGA 58.936 45.455 0.00 0.00 33.05 3.27
203 204 2.412847 GCAGGTTCGTCGGAAAATTCAG 60.413 50.000 0.00 0.00 33.05 3.02
204 205 1.533731 GCAGGTTCGTCGGAAAATTCA 59.466 47.619 0.00 0.00 33.05 2.57
205 206 1.533731 TGCAGGTTCGTCGGAAAATTC 59.466 47.619 0.00 0.00 33.05 2.17
206 207 1.265905 GTGCAGGTTCGTCGGAAAATT 59.734 47.619 0.00 0.00 33.05 1.82
207 208 0.872388 GTGCAGGTTCGTCGGAAAAT 59.128 50.000 0.00 0.00 33.05 1.82
208 209 1.161563 GGTGCAGGTTCGTCGGAAAA 61.162 55.000 0.00 0.00 33.05 2.29
209 210 1.595929 GGTGCAGGTTCGTCGGAAA 60.596 57.895 0.00 0.00 33.05 3.13
210 211 2.029964 GGTGCAGGTTCGTCGGAA 59.970 61.111 0.00 0.00 0.00 4.30
211 212 3.998672 GGGTGCAGGTTCGTCGGA 61.999 66.667 0.00 0.00 0.00 4.55
214 215 3.948719 TGGGGGTGCAGGTTCGTC 61.949 66.667 0.00 0.00 0.00 4.20
215 216 4.265056 GTGGGGGTGCAGGTTCGT 62.265 66.667 0.00 0.00 0.00 3.85
217 218 4.678743 GGGTGGGGGTGCAGGTTC 62.679 72.222 0.00 0.00 0.00 3.62
226 227 4.123545 GATGGTTCGGGGTGGGGG 62.124 72.222 0.00 0.00 0.00 5.40
227 228 2.223464 ATTGATGGTTCGGGGTGGGG 62.223 60.000 0.00 0.00 0.00 4.96
228 229 0.751643 GATTGATGGTTCGGGGTGGG 60.752 60.000 0.00 0.00 0.00 4.61
229 230 0.255890 AGATTGATGGTTCGGGGTGG 59.744 55.000 0.00 0.00 0.00 4.61
230 231 2.017049 GAAGATTGATGGTTCGGGGTG 58.983 52.381 0.00 0.00 0.00 4.61
231 232 1.406887 CGAAGATTGATGGTTCGGGGT 60.407 52.381 0.00 0.00 39.48 4.95
232 233 1.299541 CGAAGATTGATGGTTCGGGG 58.700 55.000 0.00 0.00 39.48 5.73
235 236 2.860735 GAGTCCGAAGATTGATGGTTCG 59.139 50.000 0.00 0.00 42.13 3.95
236 237 2.860735 CGAGTCCGAAGATTGATGGTTC 59.139 50.000 0.00 0.00 38.22 3.62
237 238 2.893637 CGAGTCCGAAGATTGATGGTT 58.106 47.619 0.00 0.00 38.22 3.67
238 239 1.471676 GCGAGTCCGAAGATTGATGGT 60.472 52.381 0.00 0.00 38.22 3.55
239 240 1.212616 GCGAGTCCGAAGATTGATGG 58.787 55.000 0.00 0.00 38.22 3.51
240 241 1.212616 GGCGAGTCCGAAGATTGATG 58.787 55.000 0.00 0.00 38.22 3.07
241 242 0.105039 GGGCGAGTCCGAAGATTGAT 59.895 55.000 0.00 0.00 38.22 2.57
242 243 1.515954 GGGCGAGTCCGAAGATTGA 59.484 57.895 0.00 0.00 38.22 2.57
243 244 1.521681 GGGGCGAGTCCGAAGATTG 60.522 63.158 0.00 0.00 38.22 2.67
244 245 2.732619 GGGGGCGAGTCCGAAGATT 61.733 63.158 0.00 0.00 38.22 2.40
245 246 3.155167 GGGGGCGAGTCCGAAGAT 61.155 66.667 0.00 0.00 38.22 2.40
246 247 4.689549 TGGGGGCGAGTCCGAAGA 62.690 66.667 0.00 0.00 38.22 2.87
247 248 4.452733 GTGGGGGCGAGTCCGAAG 62.453 72.222 0.00 0.00 38.22 3.79
259 260 4.256180 GAGCCATAGCCGGTGGGG 62.256 72.222 11.30 5.57 41.25 4.96
260 261 4.609018 CGAGCCATAGCCGGTGGG 62.609 72.222 11.30 5.23 41.25 4.61
261 262 2.869503 AAACGAGCCATAGCCGGTGG 62.870 60.000 1.90 3.84 41.25 4.61
262 263 1.429148 GAAACGAGCCATAGCCGGTG 61.429 60.000 1.90 0.00 41.25 4.94
263 264 1.153429 GAAACGAGCCATAGCCGGT 60.153 57.895 1.90 0.00 41.25 5.28
264 265 1.144057 AGAAACGAGCCATAGCCGG 59.856 57.895 0.00 0.00 41.25 6.13
265 266 1.154205 CCAGAAACGAGCCATAGCCG 61.154 60.000 0.00 0.00 41.25 5.52
266 267 0.107654 ACCAGAAACGAGCCATAGCC 60.108 55.000 0.00 0.00 41.25 3.93
267 268 2.100916 TCTACCAGAAACGAGCCATAGC 59.899 50.000 0.00 0.00 40.32 2.97
268 269 3.243569 CCTCTACCAGAAACGAGCCATAG 60.244 52.174 0.00 0.00 0.00 2.23
269 270 2.693591 CCTCTACCAGAAACGAGCCATA 59.306 50.000 0.00 0.00 0.00 2.74
270 271 1.482593 CCTCTACCAGAAACGAGCCAT 59.517 52.381 0.00 0.00 0.00 4.40
271 272 0.895530 CCTCTACCAGAAACGAGCCA 59.104 55.000 0.00 0.00 0.00 4.75
272 273 0.460459 GCCTCTACCAGAAACGAGCC 60.460 60.000 0.00 0.00 0.00 4.70
273 274 0.460459 GGCCTCTACCAGAAACGAGC 60.460 60.000 0.00 0.00 0.00 5.03
274 275 1.187087 AGGCCTCTACCAGAAACGAG 58.813 55.000 0.00 0.00 0.00 4.18
275 276 1.275291 CAAGGCCTCTACCAGAAACGA 59.725 52.381 5.23 0.00 0.00 3.85
276 277 1.275291 TCAAGGCCTCTACCAGAAACG 59.725 52.381 5.23 0.00 0.00 3.60
277 278 2.701107 GTCAAGGCCTCTACCAGAAAC 58.299 52.381 5.23 0.00 0.00 2.78
278 279 1.275291 CGTCAAGGCCTCTACCAGAAA 59.725 52.381 5.23 0.00 0.00 2.52
279 280 0.895530 CGTCAAGGCCTCTACCAGAA 59.104 55.000 5.23 0.00 0.00 3.02
280 281 0.970937 CCGTCAAGGCCTCTACCAGA 60.971 60.000 5.23 0.00 0.00 3.86
281 282 1.258445 ACCGTCAAGGCCTCTACCAG 61.258 60.000 5.23 3.21 46.52 4.00
282 283 1.229082 ACCGTCAAGGCCTCTACCA 60.229 57.895 5.23 0.00 46.52 3.25
283 284 1.218316 CACCGTCAAGGCCTCTACC 59.782 63.158 5.23 0.00 46.52 3.18
284 285 0.108756 GACACCGTCAAGGCCTCTAC 60.109 60.000 5.23 6.54 46.52 2.59
285 286 1.255667 GGACACCGTCAAGGCCTCTA 61.256 60.000 5.23 0.00 46.52 2.43
286 287 2.584391 GGACACCGTCAAGGCCTCT 61.584 63.158 5.23 0.00 46.52 3.69
287 288 2.047179 GGACACCGTCAAGGCCTC 60.047 66.667 5.23 0.00 46.52 4.70
288 289 3.637273 GGGACACCGTCAAGGCCT 61.637 66.667 0.00 0.00 46.52 5.19
289 290 4.717313 GGGGACACCGTCAAGGCC 62.717 72.222 0.00 0.00 46.52 5.19
314 315 4.712425 ACCACGACGTGCGGTAGC 62.712 66.667 22.46 0.00 46.49 3.58
315 316 2.803670 CACCACGACGTGCGGTAG 60.804 66.667 22.46 10.77 46.49 3.18
336 337 3.431725 GAAGGAAGCGGGCGTTGG 61.432 66.667 0.00 0.00 0.00 3.77
337 338 2.358737 AGAAGGAAGCGGGCGTTG 60.359 61.111 0.00 0.00 0.00 4.10
338 339 2.047179 GAGAAGGAAGCGGGCGTT 60.047 61.111 0.00 0.00 0.00 4.84
339 340 4.083862 GGAGAAGGAAGCGGGCGT 62.084 66.667 0.00 0.00 0.00 5.68
340 341 4.082523 TGGAGAAGGAAGCGGGCG 62.083 66.667 0.00 0.00 0.00 6.13
341 342 2.436824 GTGGAGAAGGAAGCGGGC 60.437 66.667 0.00 0.00 0.00 6.13
342 343 2.269241 GGTGGAGAAGGAAGCGGG 59.731 66.667 0.00 0.00 0.00 6.13
343 344 2.125512 CGGTGGAGAAGGAAGCGG 60.126 66.667 0.00 0.00 0.00 5.52
344 345 0.108138 ATTCGGTGGAGAAGGAAGCG 60.108 55.000 0.00 0.00 33.19 4.68
345 346 1.740025 CAATTCGGTGGAGAAGGAAGC 59.260 52.381 0.00 0.00 33.19 3.86
346 347 3.334583 TCAATTCGGTGGAGAAGGAAG 57.665 47.619 0.00 0.00 33.19 3.46
347 348 3.408634 GTTCAATTCGGTGGAGAAGGAA 58.591 45.455 0.00 0.00 33.19 3.36
348 349 2.611971 CGTTCAATTCGGTGGAGAAGGA 60.612 50.000 0.00 0.00 33.19 3.36
349 350 1.732259 CGTTCAATTCGGTGGAGAAGG 59.268 52.381 0.00 0.00 33.19 3.46
350 351 1.732259 CCGTTCAATTCGGTGGAGAAG 59.268 52.381 0.00 0.00 42.62 2.85
351 352 1.803334 CCGTTCAATTCGGTGGAGAA 58.197 50.000 0.00 0.00 42.62 2.87
352 353 3.525619 CCGTTCAATTCGGTGGAGA 57.474 52.632 0.00 0.00 42.62 3.71
359 360 2.258755 GAATTTGGGCCGTTCAATTCG 58.741 47.619 11.99 0.00 0.00 3.34
360 361 2.094957 TCGAATTTGGGCCGTTCAATTC 60.095 45.455 15.26 15.26 0.00 2.17
361 362 1.889829 TCGAATTTGGGCCGTTCAATT 59.110 42.857 14.02 8.98 0.00 2.32
362 363 1.540267 TCGAATTTGGGCCGTTCAAT 58.460 45.000 14.02 1.63 0.00 2.57
363 364 1.319541 TTCGAATTTGGGCCGTTCAA 58.680 45.000 14.02 0.00 0.00 2.69
364 365 1.319541 TTTCGAATTTGGGCCGTTCA 58.680 45.000 14.02 0.00 0.00 3.18
365 366 2.526077 GATTTCGAATTTGGGCCGTTC 58.474 47.619 0.00 2.44 0.00 3.95
366 367 1.203758 GGATTTCGAATTTGGGCCGTT 59.796 47.619 0.00 0.00 0.00 4.44
367 368 0.815095 GGATTTCGAATTTGGGCCGT 59.185 50.000 0.00 0.00 0.00 5.68
368 369 0.814457 TGGATTTCGAATTTGGGCCG 59.186 50.000 0.00 0.00 0.00 6.13
369 370 1.136891 CCTGGATTTCGAATTTGGGCC 59.863 52.381 0.00 0.00 0.00 5.80
370 371 1.824852 ACCTGGATTTCGAATTTGGGC 59.175 47.619 0.00 0.00 0.00 5.36
371 372 3.088532 TGACCTGGATTTCGAATTTGGG 58.911 45.455 0.00 1.03 0.00 4.12
372 373 3.758554 AGTGACCTGGATTTCGAATTTGG 59.241 43.478 0.00 2.82 0.00 3.28
373 374 6.494893 TTAGTGACCTGGATTTCGAATTTG 57.505 37.500 0.00 0.00 0.00 2.32
374 375 6.659242 ACATTAGTGACCTGGATTTCGAATTT 59.341 34.615 0.00 0.00 0.00 1.82
375 376 6.180472 ACATTAGTGACCTGGATTTCGAATT 58.820 36.000 0.00 0.00 0.00 2.17
376 377 5.745227 ACATTAGTGACCTGGATTTCGAAT 58.255 37.500 0.00 0.00 0.00 3.34
377 378 5.160607 ACATTAGTGACCTGGATTTCGAA 57.839 39.130 0.00 0.00 0.00 3.71
378 379 4.382685 GGACATTAGTGACCTGGATTTCGA 60.383 45.833 0.00 0.00 37.23 3.71
379 380 3.871594 GGACATTAGTGACCTGGATTTCG 59.128 47.826 0.00 0.00 37.23 3.46
380 381 4.843728 TGGACATTAGTGACCTGGATTTC 58.156 43.478 0.00 0.00 40.28 2.17
381 382 4.848357 CTGGACATTAGTGACCTGGATTT 58.152 43.478 0.00 0.00 40.28 2.17
382 383 3.370953 GCTGGACATTAGTGACCTGGATT 60.371 47.826 13.29 0.00 40.28 3.01
383 384 2.171448 GCTGGACATTAGTGACCTGGAT 59.829 50.000 13.29 0.00 40.28 3.41
384 385 1.555075 GCTGGACATTAGTGACCTGGA 59.445 52.381 13.29 0.00 40.28 3.86
385 386 1.278985 TGCTGGACATTAGTGACCTGG 59.721 52.381 13.29 0.00 40.28 4.45
386 387 2.768253 TGCTGGACATTAGTGACCTG 57.232 50.000 8.10 8.41 40.28 4.00
387 388 3.788227 TTTGCTGGACATTAGTGACCT 57.212 42.857 8.10 0.00 40.28 3.85
388 389 4.095483 CAGATTTGCTGGACATTAGTGACC 59.905 45.833 0.00 0.00 41.07 4.02
389 390 4.937620 TCAGATTTGCTGGACATTAGTGAC 59.062 41.667 0.00 0.00 44.98 3.67
390 391 5.164620 TCAGATTTGCTGGACATTAGTGA 57.835 39.130 0.00 0.00 44.98 3.41
391 392 6.765036 AGTATCAGATTTGCTGGACATTAGTG 59.235 38.462 0.00 0.00 44.98 2.74
392 393 6.893583 AGTATCAGATTTGCTGGACATTAGT 58.106 36.000 0.00 0.00 44.98 2.24
393 394 8.893219 TTAGTATCAGATTTGCTGGACATTAG 57.107 34.615 0.00 0.00 44.98 1.73
397 398 9.851686 AAATATTAGTATCAGATTTGCTGGACA 57.148 29.630 0.00 0.00 44.98 4.02
458 459 6.356556 ACTTAGATGTGCAATACTTATGGCA 58.643 36.000 0.00 0.00 40.19 4.92
459 460 6.483307 TGACTTAGATGTGCAATACTTATGGC 59.517 38.462 0.00 0.00 33.16 4.40
460 461 8.613060 ATGACTTAGATGTGCAATACTTATGG 57.387 34.615 0.00 0.00 0.00 2.74
487 488 9.987272 ACGAATCTCAATGTAAGATCAATGATA 57.013 29.630 0.00 0.00 32.29 2.15
488 489 8.771766 CACGAATCTCAATGTAAGATCAATGAT 58.228 33.333 0.00 0.00 32.29 2.45
489 490 7.765819 ACACGAATCTCAATGTAAGATCAATGA 59.234 33.333 0.00 0.00 32.29 2.57
490 491 7.849515 CACACGAATCTCAATGTAAGATCAATG 59.150 37.037 0.00 0.00 32.29 2.82
491 492 7.765819 TCACACGAATCTCAATGTAAGATCAAT 59.234 33.333 0.00 0.00 32.29 2.57
492 493 7.096551 TCACACGAATCTCAATGTAAGATCAA 58.903 34.615 0.00 0.00 32.29 2.57
493 494 6.630071 TCACACGAATCTCAATGTAAGATCA 58.370 36.000 0.00 0.00 32.29 2.92
494 495 7.525688 TTCACACGAATCTCAATGTAAGATC 57.474 36.000 0.00 0.00 32.29 2.75
495 496 9.770097 ATATTCACACGAATCTCAATGTAAGAT 57.230 29.630 0.00 0.00 41.09 2.40
496 497 9.599866 AATATTCACACGAATCTCAATGTAAGA 57.400 29.630 0.00 0.00 41.09 2.10
500 501 8.950210 AGAAAATATTCACACGAATCTCAATGT 58.050 29.630 0.00 0.00 41.09 2.71
501 502 9.778993 AAGAAAATATTCACACGAATCTCAATG 57.221 29.630 0.00 0.00 41.09 2.82
503 504 9.825972 GAAAGAAAATATTCACACGAATCTCAA 57.174 29.630 0.00 0.00 41.09 3.02
504 505 9.219603 AGAAAGAAAATATTCACACGAATCTCA 57.780 29.630 0.00 0.00 41.09 3.27
505 506 9.695884 GAGAAAGAAAATATTCACACGAATCTC 57.304 33.333 0.00 0.00 41.09 2.75
506 507 9.442047 AGAGAAAGAAAATATTCACACGAATCT 57.558 29.630 0.00 0.00 41.09 2.40
523 524 9.956720 CAAGCATAAAGAGAAAAAGAGAAAGAA 57.043 29.630 0.00 0.00 0.00 2.52
524 525 9.342308 TCAAGCATAAAGAGAAAAAGAGAAAGA 57.658 29.630 0.00 0.00 0.00 2.52
528 529 9.288576 TGAATCAAGCATAAAGAGAAAAAGAGA 57.711 29.630 0.00 0.00 0.00 3.10
529 530 9.339492 GTGAATCAAGCATAAAGAGAAAAAGAG 57.661 33.333 0.00 0.00 0.00 2.85
530 531 9.071276 AGTGAATCAAGCATAAAGAGAAAAAGA 57.929 29.630 0.00 0.00 0.00 2.52
531 532 9.339492 GAGTGAATCAAGCATAAAGAGAAAAAG 57.661 33.333 0.00 0.00 0.00 2.27
532 533 8.849168 TGAGTGAATCAAGCATAAAGAGAAAAA 58.151 29.630 0.00 0.00 34.02 1.94
533 534 8.292448 GTGAGTGAATCAAGCATAAAGAGAAAA 58.708 33.333 0.00 0.00 40.43 2.29
534 535 7.663081 AGTGAGTGAATCAAGCATAAAGAGAAA 59.337 33.333 0.00 0.00 40.43 2.52
535 536 7.164122 AGTGAGTGAATCAAGCATAAAGAGAA 58.836 34.615 0.00 0.00 40.43 2.87
536 537 6.705302 AGTGAGTGAATCAAGCATAAAGAGA 58.295 36.000 0.00 0.00 40.43 3.10
537 538 6.981762 AGTGAGTGAATCAAGCATAAAGAG 57.018 37.500 0.00 0.00 40.43 2.85
538 539 8.314021 TCTAAGTGAGTGAATCAAGCATAAAGA 58.686 33.333 0.00 0.00 40.43 2.52
539 540 8.484641 TCTAAGTGAGTGAATCAAGCATAAAG 57.515 34.615 0.00 0.00 40.43 1.85
540 541 8.886719 CATCTAAGTGAGTGAATCAAGCATAAA 58.113 33.333 0.00 0.00 40.43 1.40
541 542 8.043113 ACATCTAAGTGAGTGAATCAAGCATAA 58.957 33.333 0.00 0.00 40.43 1.90
542 543 7.493645 CACATCTAAGTGAGTGAATCAAGCATA 59.506 37.037 0.00 0.00 42.05 3.14
543 544 6.315642 CACATCTAAGTGAGTGAATCAAGCAT 59.684 38.462 0.00 0.00 42.05 3.79
544 545 5.640783 CACATCTAAGTGAGTGAATCAAGCA 59.359 40.000 0.00 0.00 42.05 3.91
545 546 5.447010 GCACATCTAAGTGAGTGAATCAAGC 60.447 44.000 0.00 0.00 42.05 4.01
546 547 5.640783 TGCACATCTAAGTGAGTGAATCAAG 59.359 40.000 0.00 0.00 42.05 3.02
547 548 5.550290 TGCACATCTAAGTGAGTGAATCAA 58.450 37.500 0.00 0.00 42.05 2.57
548 549 5.151297 TGCACATCTAAGTGAGTGAATCA 57.849 39.130 0.00 0.00 42.05 2.57
549 550 6.674694 ATTGCACATCTAAGTGAGTGAATC 57.325 37.500 0.00 0.00 42.05 2.52
550 551 8.743085 ATTATTGCACATCTAAGTGAGTGAAT 57.257 30.769 0.00 0.00 42.05 2.57
551 552 8.565896 AATTATTGCACATCTAAGTGAGTGAA 57.434 30.769 0.00 0.00 42.05 3.18
552 553 9.665719 TTAATTATTGCACATCTAAGTGAGTGA 57.334 29.630 0.00 0.00 42.05 3.41
574 575 9.950496 CTAGGCCACATCTAGATATGTTTTAAT 57.050 33.333 10.06 0.00 38.01 1.40
575 576 9.154632 TCTAGGCCACATCTAGATATGTTTTAA 57.845 33.333 10.06 0.00 38.01 1.52
576 577 8.585881 GTCTAGGCCACATCTAGATATGTTTTA 58.414 37.037 10.06 0.00 43.25 1.52
577 578 7.071196 TGTCTAGGCCACATCTAGATATGTTTT 59.929 37.037 10.06 0.00 43.25 2.43
578 579 6.554982 TGTCTAGGCCACATCTAGATATGTTT 59.445 38.462 10.06 0.00 43.25 2.83
579 580 6.015010 GTGTCTAGGCCACATCTAGATATGTT 60.015 42.308 10.06 0.00 43.25 2.71
580 581 5.478679 GTGTCTAGGCCACATCTAGATATGT 59.521 44.000 10.06 1.73 43.25 2.29
581 582 5.478332 TGTGTCTAGGCCACATCTAGATATG 59.522 44.000 5.01 4.18 43.25 1.78
582 583 5.645201 TGTGTCTAGGCCACATCTAGATAT 58.355 41.667 5.01 0.00 43.25 1.63
583 584 5.061721 TGTGTCTAGGCCACATCTAGATA 57.938 43.478 5.01 0.00 43.25 1.98
584 585 3.916035 TGTGTCTAGGCCACATCTAGAT 58.084 45.455 5.01 0.00 43.25 1.98
585 586 3.382083 TGTGTCTAGGCCACATCTAGA 57.618 47.619 5.01 0.00 40.38 2.43
586 587 3.430929 GGTTGTGTCTAGGCCACATCTAG 60.431 52.174 5.01 0.00 42.05 2.43
587 588 2.500098 GGTTGTGTCTAGGCCACATCTA 59.500 50.000 5.01 1.24 42.05 1.98
588 589 1.279271 GGTTGTGTCTAGGCCACATCT 59.721 52.381 5.01 0.00 42.05 2.90
589 590 1.003118 TGGTTGTGTCTAGGCCACATC 59.997 52.381 5.01 13.30 42.05 3.06
590 591 1.064003 TGGTTGTGTCTAGGCCACAT 58.936 50.000 5.01 0.00 42.05 3.21
591 592 1.064003 ATGGTTGTGTCTAGGCCACA 58.936 50.000 5.01 10.84 40.87 4.17
592 593 3.560636 ATATGGTTGTGTCTAGGCCAC 57.439 47.619 5.01 0.00 31.47 5.01
593 594 4.584638 AAATATGGTTGTGTCTAGGCCA 57.415 40.909 5.01 0.00 0.00 5.36
594 595 4.035208 CGAAAATATGGTTGTGTCTAGGCC 59.965 45.833 0.00 0.00 0.00 5.19
595 596 4.873827 TCGAAAATATGGTTGTGTCTAGGC 59.126 41.667 0.00 0.00 0.00 3.93
596 597 7.170998 GGTATCGAAAATATGGTTGTGTCTAGG 59.829 40.741 0.00 0.00 0.00 3.02
597 598 7.709182 TGGTATCGAAAATATGGTTGTGTCTAG 59.291 37.037 0.00 0.00 0.00 2.43
598 599 7.557724 TGGTATCGAAAATATGGTTGTGTCTA 58.442 34.615 0.00 0.00 0.00 2.59
599 600 6.411376 TGGTATCGAAAATATGGTTGTGTCT 58.589 36.000 0.00 0.00 0.00 3.41
600 601 6.671614 TGGTATCGAAAATATGGTTGTGTC 57.328 37.500 0.00 0.00 0.00 3.67
601 602 7.479980 CATTGGTATCGAAAATATGGTTGTGT 58.520 34.615 0.00 0.00 0.00 3.72
602 603 6.417635 GCATTGGTATCGAAAATATGGTTGTG 59.582 38.462 0.00 0.00 0.00 3.33
603 604 6.321181 AGCATTGGTATCGAAAATATGGTTGT 59.679 34.615 0.00 0.00 0.00 3.32
604 605 6.738114 AGCATTGGTATCGAAAATATGGTTG 58.262 36.000 0.00 0.00 0.00 3.77
605 606 6.959639 AGCATTGGTATCGAAAATATGGTT 57.040 33.333 0.00 0.00 0.00 3.67
606 607 7.173218 CAGTAGCATTGGTATCGAAAATATGGT 59.827 37.037 0.00 0.00 0.00 3.55
607 608 7.173218 ACAGTAGCATTGGTATCGAAAATATGG 59.827 37.037 0.00 0.00 0.00 2.74
608 609 8.087982 ACAGTAGCATTGGTATCGAAAATATG 57.912 34.615 0.00 0.00 0.00 1.78
711 712 7.692705 GCTTGATCGGTTCATTACTTTACTTTC 59.307 37.037 0.00 0.00 33.34 2.62
750 751 0.591659 GGCCGAGGAAAGACAAACAC 59.408 55.000 0.00 0.00 0.00 3.32
758 759 0.543749 ATTGAGAGGGCCGAGGAAAG 59.456 55.000 0.00 0.00 0.00 2.62
760 761 1.338136 GGATTGAGAGGGCCGAGGAA 61.338 60.000 0.00 0.00 0.00 3.36
761 762 1.762460 GGATTGAGAGGGCCGAGGA 60.762 63.158 0.00 0.00 0.00 3.71
762 763 1.414061 ATGGATTGAGAGGGCCGAGG 61.414 60.000 0.00 0.00 0.00 4.63
764 765 1.410850 GGATGGATTGAGAGGGCCGA 61.411 60.000 0.00 0.00 0.00 5.54
765 766 1.072159 GGATGGATTGAGAGGGCCG 59.928 63.158 0.00 0.00 0.00 6.13
766 767 0.399833 GAGGATGGATTGAGAGGGCC 59.600 60.000 0.00 0.00 0.00 5.80
912 914 1.523758 GTCGATTTGCAGAGTTGGGT 58.476 50.000 0.00 0.00 0.00 4.51
913 915 0.804989 GGTCGATTTGCAGAGTTGGG 59.195 55.000 0.00 0.00 0.00 4.12
914 916 1.734465 GAGGTCGATTTGCAGAGTTGG 59.266 52.381 0.00 0.00 0.00 3.77
915 917 1.734465 GGAGGTCGATTTGCAGAGTTG 59.266 52.381 0.00 0.00 0.00 3.16
916 918 1.339151 GGGAGGTCGATTTGCAGAGTT 60.339 52.381 0.00 0.00 0.00 3.01
917 919 0.250513 GGGAGGTCGATTTGCAGAGT 59.749 55.000 0.00 0.00 0.00 3.24
918 920 0.250234 TGGGAGGTCGATTTGCAGAG 59.750 55.000 0.00 0.00 0.00 3.35
919 921 0.036388 GTGGGAGGTCGATTTGCAGA 60.036 55.000 0.00 0.00 0.00 4.26
920 922 1.361668 CGTGGGAGGTCGATTTGCAG 61.362 60.000 0.00 0.00 0.00 4.41
921 923 1.375396 CGTGGGAGGTCGATTTGCA 60.375 57.895 0.00 0.00 0.00 4.08
922 924 2.750888 GCGTGGGAGGTCGATTTGC 61.751 63.158 0.00 0.00 0.00 3.68
923 925 1.375396 TGCGTGGGAGGTCGATTTG 60.375 57.895 0.00 0.00 0.00 2.32
924 926 1.375523 GTGCGTGGGAGGTCGATTT 60.376 57.895 0.00 0.00 0.00 2.17
925 927 2.264794 GTGCGTGGGAGGTCGATT 59.735 61.111 0.00 0.00 0.00 3.34
926 928 4.129737 CGTGCGTGGGAGGTCGAT 62.130 66.667 0.00 0.00 0.00 3.59
1066 1106 1.670087 CGTCTTCACCAGCTTGTCGAT 60.670 52.381 0.00 0.00 0.00 3.59
1152 1192 2.270527 GTCTCCCAGCTCTTGGCC 59.729 66.667 0.00 0.00 46.32 5.36
1365 1405 3.000080 GAACGCCGACACGAAGCTG 62.000 63.158 0.00 0.00 36.70 4.24
1495 1544 3.151022 CACCTCGCCCTCCCTCTC 61.151 72.222 0.00 0.00 0.00 3.20
1662 1711 0.462047 GCCAGTTCCTGTACCATCCG 60.462 60.000 0.00 0.00 0.00 4.18
1665 1714 1.198759 ACGGCCAGTTCCTGTACCAT 61.199 55.000 2.24 0.00 0.00 3.55
1695 1744 0.038159 CCTATCCAATCCGACCGAGC 60.038 60.000 0.00 0.00 0.00 5.03
1698 1747 0.321671 ATGCCTATCCAATCCGACCG 59.678 55.000 0.00 0.00 0.00 4.79
1707 1756 0.105964 CCGGTCGAAATGCCTATCCA 59.894 55.000 0.00 0.00 0.00 3.41
1779 1828 6.578944 TGCCATACAACAGTCTCGTAATAAT 58.421 36.000 0.00 0.00 0.00 1.28
1780 1829 5.968254 TGCCATACAACAGTCTCGTAATAA 58.032 37.500 0.00 0.00 0.00 1.40
1781 1830 5.358725 TCTGCCATACAACAGTCTCGTAATA 59.641 40.000 0.00 0.00 35.37 0.98
1796 1845 1.740025 GTTGCCAGAACTCTGCCATAC 59.260 52.381 0.89 0.00 42.47 2.39
1888 1962 1.202698 ACTTGAGCTCGCACCTTCTTT 60.203 47.619 9.64 0.00 0.00 2.52
2033 2112 9.637084 ATCTAGTTGATGTTTTGGCGAAAGCAG 62.637 40.741 15.22 1.84 46.92 4.24
2036 2115 5.356882 TCTAGTTGATGTTTTGGCGAAAG 57.643 39.130 0.00 0.00 0.00 2.62
2041 2120 4.260784 CCGCTATCTAGTTGATGTTTTGGC 60.261 45.833 0.00 0.00 36.65 4.52
2044 2123 5.581085 GTCACCGCTATCTAGTTGATGTTTT 59.419 40.000 0.00 0.00 36.65 2.43
2058 2137 2.186903 CGGCTTGGTCACCGCTAT 59.813 61.111 0.00 0.00 43.44 2.97
2092 2171 2.741985 CATGACGACGCCTTGGCA 60.742 61.111 12.45 0.00 0.00 4.92
2093 2172 2.740714 GACATGACGACGCCTTGGC 61.741 63.158 0.00 0.75 0.00 4.52
2094 2173 0.172578 TAGACATGACGACGCCTTGG 59.827 55.000 0.00 0.00 0.00 3.61
2095 2174 1.550065 CTAGACATGACGACGCCTTG 58.450 55.000 0.00 0.00 0.00 3.61
2096 2175 0.456221 CCTAGACATGACGACGCCTT 59.544 55.000 0.00 0.00 0.00 4.35
2109 2189 3.155167 CCCCGACCTGGCCTAGAC 61.155 72.222 3.32 0.00 35.87 2.59
2381 2461 1.758280 TGGGAATGATGGCTGATTTGC 59.242 47.619 0.00 0.00 0.00 3.68
2391 2471 2.838386 CGAAGCAACTGGGAATGATG 57.162 50.000 0.00 0.00 0.00 3.07
2427 2601 7.117523 TGTTTGTTCAGAAATGAAACACCAAAG 59.882 33.333 10.38 0.00 32.90 2.77
2448 2622 6.655062 TCTTGTCTACTGCGTAAATTGTTTG 58.345 36.000 0.00 0.00 0.00 2.93
2469 2759 5.361285 AGTCTCGGCTATAGATTGTGTTCTT 59.639 40.000 3.21 0.00 0.00 2.52
2485 2777 5.112686 AGATGTAAAGATTTCAGTCTCGGC 58.887 41.667 0.00 0.00 0.00 5.54
2486 2778 8.191446 TCTTAGATGTAAAGATTTCAGTCTCGG 58.809 37.037 0.00 0.00 0.00 4.63
2544 2845 0.255890 ATGTTGTGATCGGGAAGGGG 59.744 55.000 0.00 0.00 0.00 4.79
2664 2969 2.974794 TGAGGTATGGATGGATGACCTG 59.025 50.000 0.00 0.00 40.65 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.