Multiple sequence alignment - TraesCS2D01G351500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G351500 chr2D 100.000 3591 0 0 1 3591 449698260 449694670 0.000000e+00 6632.0
1 TraesCS2D01G351500 chr2D 93.514 185 5 4 95 272 449697710 449697526 5.910000e-68 268.0
2 TraesCS2D01G351500 chr2D 93.514 185 5 4 551 735 449698166 449697989 5.910000e-68 268.0
3 TraesCS2D01G351500 chr2D 100.000 68 0 0 3524 3591 625183637 625183570 3.760000e-25 126.0
4 TraesCS2D01G351500 chr2A 94.872 1170 43 7 1855 3014 593312382 593313544 0.000000e+00 1812.0
5 TraesCS2D01G351500 chr2A 87.156 1308 89 43 580 1870 593311123 593312368 0.000000e+00 1411.0
6 TraesCS2D01G351500 chr2A 90.571 350 15 7 3038 3375 593314936 593315279 7.070000e-122 448.0
7 TraesCS2D01G351500 chr2A 86.594 276 21 7 1 272 593311006 593311269 1.260000e-74 291.0
8 TraesCS2D01G351500 chr2A 94.000 50 1 1 3480 3527 749868658 749868707 1.380000e-09 75.0
9 TraesCS2D01G351500 chr2A 95.556 45 0 1 3483 3525 722072650 722072606 1.790000e-08 71.3
10 TraesCS2D01G351500 chr2B 87.853 1062 87 20 930 1968 530048628 530047586 0.000000e+00 1208.0
11 TraesCS2D01G351500 chr2B 96.513 631 20 2 2388 3017 530046243 530045614 0.000000e+00 1042.0
12 TraesCS2D01G351500 chr2B 92.774 429 16 7 2997 3416 530045521 530045099 1.100000e-169 606.0
13 TraesCS2D01G351500 chr2B 92.621 393 20 2 1959 2350 530046631 530046247 1.130000e-154 556.0
14 TraesCS2D01G351500 chr2B 85.985 264 35 2 285 546 198447968 198447705 7.590000e-72 281.0
15 TraesCS2D01G351500 chr4A 87.273 275 32 3 280 552 100670209 100669936 9.680000e-81 311.0
16 TraesCS2D01G351500 chr4A 95.455 44 0 1 3486 3527 614137078 614137035 6.430000e-08 69.4
17 TraesCS2D01G351500 chr5A 86.364 264 33 3 285 546 459773237 459772975 5.870000e-73 285.0
18 TraesCS2D01G351500 chr5A 94.000 50 1 1 3480 3527 428252552 428252601 1.380000e-09 75.0
19 TraesCS2D01G351500 chr1A 85.714 259 35 2 285 541 518986281 518986023 4.570000e-69 272.0
20 TraesCS2D01G351500 chr1A 84.906 265 36 4 285 546 398055249 398054986 7.640000e-67 265.0
21 TraesCS2D01G351500 chr1A 97.260 73 2 0 3519 3591 79105019 79104947 1.350000e-24 124.0
22 TraesCS2D01G351500 chr1A 92.000 50 2 1 3480 3527 79105015 79105064 6.430000e-08 69.4
23 TraesCS2D01G351500 chr7A 84.871 271 36 5 285 552 13111041 13111309 5.910000e-68 268.0
24 TraesCS2D01G351500 chr7A 95.890 73 3 0 3519 3591 122189023 122189095 6.300000e-23 119.0
25 TraesCS2D01G351500 chr7A 93.617 47 1 1 3483 3527 97404638 97404592 6.430000e-08 69.4
26 TraesCS2D01G351500 chr6A 85.283 265 34 5 285 546 332564742 332564480 5.910000e-68 268.0
27 TraesCS2D01G351500 chr6A 85.328 259 36 2 285 541 58765114 58764856 2.130000e-67 267.0
28 TraesCS2D01G351500 chr1D 85.227 264 34 4 285 546 159139674 159139414 2.130000e-67 267.0
29 TraesCS2D01G351500 chr1D 93.617 47 1 1 3483 3527 396167558 396167512 6.430000e-08 69.4
30 TraesCS2D01G351500 chr7D 100.000 68 0 0 3524 3591 585601397 585601464 3.760000e-25 126.0
31 TraesCS2D01G351500 chr7D 92.000 50 2 1 3480 3527 436882659 436882708 6.430000e-08 69.4
32 TraesCS2D01G351500 chr3D 100.000 68 0 0 3524 3591 576708843 576708776 3.760000e-25 126.0
33 TraesCS2D01G351500 chr3D 98.529 68 1 0 3524 3591 54781291 54781224 1.750000e-23 121.0
34 TraesCS2D01G351500 chr7B 97.260 73 1 1 3519 3591 640279121 640279192 4.870000e-24 122.0
35 TraesCS2D01G351500 chr6D 98.529 68 1 0 3524 3591 15124222 15124155 1.750000e-23 121.0
36 TraesCS2D01G351500 chr5D 98.529 68 1 0 3524 3591 449885452 449885519 1.750000e-23 121.0
37 TraesCS2D01G351500 chr6B 93.617 47 1 1 3483 3527 707252829 707252783 6.430000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G351500 chr2D 449694670 449698260 3590 True 2389.333333 6632 95.67600 1 3591 3 chr2D.!!$R2 3590
1 TraesCS2D01G351500 chr2A 593311006 593315279 4273 False 990.500000 1812 89.79825 1 3375 4 chr2A.!!$F2 3374
2 TraesCS2D01G351500 chr2B 530045099 530048628 3529 True 853.000000 1208 92.44025 930 3416 4 chr2B.!!$R2 2486

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
282 287 0.326927 CCCCAGCCGTTTCCTAAGAA 59.673 55.0 0.00 0.0 0.00 2.52 F
656 661 0.460311 ATTTCACTCTACCGCCGGAG 59.540 55.0 11.71 0.0 35.86 4.63 F
1089 1098 0.477597 TCACCAAGTGGAGGGGGATT 60.478 55.0 3.83 0.0 38.94 3.01 F
1849 1881 0.742505 CACATTGGCCTCGCATCATT 59.257 50.0 3.32 0.0 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1289 1305 0.331954 AGACTCCTTCGAGGGCTACA 59.668 55.000 9.09 0.0 40.77 2.74 R
1996 3023 0.463620 CCTAGAGCTCTGAACCTGCC 59.536 60.000 26.78 0.0 0.00 4.85 R
2380 3410 1.141657 AGGAGTGCAAGAACAGCTCAA 59.858 47.619 0.00 0.0 0.00 3.02 R
3101 5598 0.039618 TGGGTTTCATCCAGGCCTTC 59.960 55.000 0.00 0.0 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.853050 GAGCTCGCTGCATGGGCT 62.853 66.667 12.87 12.87 45.94 5.19
52 53 5.819901 GGTAGATCAGATGAACCTTGGAAAG 59.180 44.000 0.00 0.00 45.69 2.62
76 77 7.160049 AGAGAGAATCGATGTAATACGAGGTA 58.840 38.462 0.00 0.00 42.67 3.08
82 83 6.296365 TCGATGTAATACGAGGTACTTGAG 57.704 41.667 0.00 0.00 44.22 3.02
101 102 0.890542 GGGGCCGTTTCGTAAACCTT 60.891 55.000 0.00 0.00 38.14 3.50
108 113 3.387397 CGTTTCGTAAACCTTCACCTCT 58.613 45.455 5.33 0.00 38.14 3.69
119 124 2.760385 CACCTCTCCGGGACTCCC 60.760 72.222 0.00 3.63 41.09 4.30
120 125 2.947785 ACCTCTCCGGGACTCCCT 60.948 66.667 12.62 0.00 42.67 4.20
121 126 2.443016 CCTCTCCGGGACTCCCTG 60.443 72.222 12.62 5.85 42.67 4.45
122 127 3.151022 CTCTCCGGGACTCCCTGC 61.151 72.222 12.62 0.00 42.67 4.85
123 128 4.779733 TCTCCGGGACTCCCTGCC 62.780 72.222 12.62 0.00 42.67 4.85
170 175 5.922544 CAGGGTTTCTTTTAGAAATGTGCAG 59.077 40.000 5.28 0.00 44.94 4.41
171 176 5.598417 AGGGTTTCTTTTAGAAATGTGCAGT 59.402 36.000 5.28 0.00 44.94 4.40
172 177 5.691754 GGGTTTCTTTTAGAAATGTGCAGTG 59.308 40.000 5.28 0.00 44.94 3.66
173 178 6.460953 GGGTTTCTTTTAGAAATGTGCAGTGA 60.461 38.462 5.28 0.00 44.94 3.41
278 283 4.090588 CGCCCCAGCCGTTTCCTA 62.091 66.667 0.00 0.00 34.57 2.94
279 284 2.353573 GCCCCAGCCGTTTCCTAA 59.646 61.111 0.00 0.00 0.00 2.69
280 285 1.749258 GCCCCAGCCGTTTCCTAAG 60.749 63.158 0.00 0.00 0.00 2.18
281 286 1.988015 CCCCAGCCGTTTCCTAAGA 59.012 57.895 0.00 0.00 0.00 2.10
282 287 0.326927 CCCCAGCCGTTTCCTAAGAA 59.673 55.000 0.00 0.00 0.00 2.52
283 288 1.271707 CCCCAGCCGTTTCCTAAGAAA 60.272 52.381 0.00 0.00 39.70 2.52
284 289 2.510613 CCCAGCCGTTTCCTAAGAAAA 58.489 47.619 0.00 0.00 43.48 2.29
285 290 2.888414 CCCAGCCGTTTCCTAAGAAAAA 59.112 45.455 0.00 0.00 43.48 1.94
286 291 3.509967 CCCAGCCGTTTCCTAAGAAAAAT 59.490 43.478 0.00 0.00 43.48 1.82
287 292 4.380550 CCCAGCCGTTTCCTAAGAAAAATC 60.381 45.833 0.00 0.00 43.48 2.17
288 293 4.459337 CCAGCCGTTTCCTAAGAAAAATCT 59.541 41.667 0.00 0.00 43.48 2.40
289 294 5.048013 CCAGCCGTTTCCTAAGAAAAATCTT 60.048 40.000 0.00 0.00 43.48 2.40
290 295 5.858581 CAGCCGTTTCCTAAGAAAAATCTTG 59.141 40.000 1.47 0.00 43.48 3.02
291 296 5.535030 AGCCGTTTCCTAAGAAAAATCTTGT 59.465 36.000 1.47 0.00 43.48 3.16
292 297 6.713450 AGCCGTTTCCTAAGAAAAATCTTGTA 59.287 34.615 1.47 0.00 43.48 2.41
293 298 7.021790 GCCGTTTCCTAAGAAAAATCTTGTAG 58.978 38.462 1.47 0.00 43.48 2.74
294 299 7.094933 GCCGTTTCCTAAGAAAAATCTTGTAGA 60.095 37.037 1.47 0.00 43.48 2.59
295 300 8.780249 CCGTTTCCTAAGAAAAATCTTGTAGAA 58.220 33.333 1.47 0.12 43.48 2.10
348 353 9.702494 AAAAATTCCTTTAGAGCTCTTTGATTG 57.298 29.630 23.84 6.45 0.00 2.67
349 354 7.401955 AATTCCTTTAGAGCTCTTTGATTGG 57.598 36.000 23.84 15.03 0.00 3.16
350 355 5.505181 TCCTTTAGAGCTCTTTGATTGGT 57.495 39.130 23.84 0.00 0.00 3.67
351 356 6.620877 TCCTTTAGAGCTCTTTGATTGGTA 57.379 37.500 23.84 0.00 0.00 3.25
352 357 6.644347 TCCTTTAGAGCTCTTTGATTGGTAG 58.356 40.000 23.84 6.20 0.00 3.18
353 358 6.440647 TCCTTTAGAGCTCTTTGATTGGTAGA 59.559 38.462 23.84 0.00 0.00 2.59
354 359 7.038302 TCCTTTAGAGCTCTTTGATTGGTAGAA 60.038 37.037 23.84 1.98 0.00 2.10
355 360 7.772757 CCTTTAGAGCTCTTTGATTGGTAGAAT 59.227 37.037 23.84 0.00 0.00 2.40
356 361 8.498054 TTTAGAGCTCTTTGATTGGTAGAATG 57.502 34.615 23.84 0.00 0.00 2.67
357 362 6.305272 AGAGCTCTTTGATTGGTAGAATGA 57.695 37.500 11.45 0.00 0.00 2.57
358 363 6.715280 AGAGCTCTTTGATTGGTAGAATGAA 58.285 36.000 11.45 0.00 0.00 2.57
359 364 7.170965 AGAGCTCTTTGATTGGTAGAATGAAA 58.829 34.615 11.45 0.00 0.00 2.69
360 365 7.833183 AGAGCTCTTTGATTGGTAGAATGAAAT 59.167 33.333 11.45 0.00 0.00 2.17
361 366 7.994194 AGCTCTTTGATTGGTAGAATGAAATC 58.006 34.615 0.00 0.00 0.00 2.17
362 367 7.067981 AGCTCTTTGATTGGTAGAATGAAATCC 59.932 37.037 0.00 0.00 0.00 3.01
363 368 7.067981 GCTCTTTGATTGGTAGAATGAAATCCT 59.932 37.037 0.00 0.00 0.00 3.24
364 369 9.618890 CTCTTTGATTGGTAGAATGAAATCCTA 57.381 33.333 0.00 0.00 0.00 2.94
401 406 9.745018 AGAATTCTTTCTATCCTTCACATTTCA 57.255 29.630 0.88 0.00 40.47 2.69
436 441 9.515226 AAACATTAGCCTAGACTCAATAAAACA 57.485 29.630 0.00 0.00 0.00 2.83
437 442 9.515226 AACATTAGCCTAGACTCAATAAAACAA 57.485 29.630 0.00 0.00 0.00 2.83
438 443 9.515226 ACATTAGCCTAGACTCAATAAAACAAA 57.485 29.630 0.00 0.00 0.00 2.83
441 446 7.631717 AGCCTAGACTCAATAAAACAAATCC 57.368 36.000 0.00 0.00 0.00 3.01
442 447 7.406104 AGCCTAGACTCAATAAAACAAATCCT 58.594 34.615 0.00 0.00 0.00 3.24
443 448 8.548877 AGCCTAGACTCAATAAAACAAATCCTA 58.451 33.333 0.00 0.00 0.00 2.94
444 449 9.343539 GCCTAGACTCAATAAAACAAATCCTAT 57.656 33.333 0.00 0.00 0.00 2.57
459 464 8.383318 ACAAATCCTATAATGTGAATCGAAGG 57.617 34.615 0.00 0.00 0.00 3.46
460 465 7.445402 ACAAATCCTATAATGTGAATCGAAGGG 59.555 37.037 0.00 0.00 0.00 3.95
461 466 4.894784 TCCTATAATGTGAATCGAAGGGC 58.105 43.478 0.00 0.00 0.00 5.19
462 467 4.346709 TCCTATAATGTGAATCGAAGGGCA 59.653 41.667 0.00 0.00 0.00 5.36
463 468 5.013079 TCCTATAATGTGAATCGAAGGGCAT 59.987 40.000 0.00 0.00 0.00 4.40
464 469 5.352569 CCTATAATGTGAATCGAAGGGCATC 59.647 44.000 0.00 0.00 0.00 3.91
465 470 3.287867 AATGTGAATCGAAGGGCATCT 57.712 42.857 0.00 0.00 0.00 2.90
466 471 2.787473 TGTGAATCGAAGGGCATCTT 57.213 45.000 0.00 0.00 38.65 2.40
467 472 2.632377 TGTGAATCGAAGGGCATCTTC 58.368 47.619 8.47 8.47 46.33 2.87
478 483 6.384258 GAAGGGCATCTTCTTTCTTATTCC 57.616 41.667 10.60 0.00 46.30 3.01
479 484 5.723860 AGGGCATCTTCTTTCTTATTCCT 57.276 39.130 0.00 0.00 0.00 3.36
480 485 6.831664 AGGGCATCTTCTTTCTTATTCCTA 57.168 37.500 0.00 0.00 0.00 2.94
481 486 6.596621 AGGGCATCTTCTTTCTTATTCCTAC 58.403 40.000 0.00 0.00 0.00 3.18
482 487 6.388394 AGGGCATCTTCTTTCTTATTCCTACT 59.612 38.462 0.00 0.00 0.00 2.57
483 488 6.708502 GGGCATCTTCTTTCTTATTCCTACTC 59.291 42.308 0.00 0.00 0.00 2.59
484 489 7.275920 GGCATCTTCTTTCTTATTCCTACTCA 58.724 38.462 0.00 0.00 0.00 3.41
485 490 7.936301 GGCATCTTCTTTCTTATTCCTACTCAT 59.064 37.037 0.00 0.00 0.00 2.90
486 491 9.988815 GCATCTTCTTTCTTATTCCTACTCATA 57.011 33.333 0.00 0.00 0.00 2.15
549 554 9.520515 TTTCTATTCCTATGATTTTCCTATGCC 57.479 33.333 0.00 0.00 0.00 4.40
550 555 8.454859 TCTATTCCTATGATTTTCCTATGCCT 57.545 34.615 0.00 0.00 0.00 4.75
551 556 9.560860 TCTATTCCTATGATTTTCCTATGCCTA 57.439 33.333 0.00 0.00 0.00 3.93
554 559 8.691661 TTCCTATGATTTTCCTATGCCTAAAC 57.308 34.615 0.00 0.00 0.00 2.01
555 560 7.231467 TCCTATGATTTTCCTATGCCTAAACC 58.769 38.462 0.00 0.00 0.00 3.27
556 561 7.073725 TCCTATGATTTTCCTATGCCTAAACCT 59.926 37.037 0.00 0.00 0.00 3.50
557 562 7.725844 CCTATGATTTTCCTATGCCTAAACCTT 59.274 37.037 0.00 0.00 0.00 3.50
558 563 7.588497 ATGATTTTCCTATGCCTAAACCTTC 57.412 36.000 0.00 0.00 0.00 3.46
559 564 6.489603 TGATTTTCCTATGCCTAAACCTTCA 58.510 36.000 0.00 0.00 0.00 3.02
560 565 6.377146 TGATTTTCCTATGCCTAAACCTTCAC 59.623 38.462 0.00 0.00 0.00 3.18
561 566 3.926058 TCCTATGCCTAAACCTTCACC 57.074 47.619 0.00 0.00 0.00 4.02
562 567 3.460825 TCCTATGCCTAAACCTTCACCT 58.539 45.455 0.00 0.00 0.00 4.00
563 568 3.454812 TCCTATGCCTAAACCTTCACCTC 59.545 47.826 0.00 0.00 0.00 3.85
564 569 3.456277 CCTATGCCTAAACCTTCACCTCT 59.544 47.826 0.00 0.00 0.00 3.69
565 570 3.636153 ATGCCTAAACCTTCACCTCTC 57.364 47.619 0.00 0.00 0.00 3.20
566 571 1.628846 TGCCTAAACCTTCACCTCTCC 59.371 52.381 0.00 0.00 0.00 3.71
567 572 1.405661 GCCTAAACCTTCACCTCTCCG 60.406 57.143 0.00 0.00 0.00 4.63
568 573 1.207329 CCTAAACCTTCACCTCTCCGG 59.793 57.143 0.00 0.00 39.35 5.14
569 574 1.207329 CTAAACCTTCACCTCTCCGGG 59.793 57.143 0.00 0.00 36.97 5.73
570 575 0.473117 AAACCTTCACCTCTCCGGGA 60.473 55.000 0.00 0.00 36.97 5.14
571 576 1.192803 AACCTTCACCTCTCCGGGAC 61.193 60.000 0.00 0.00 36.97 4.46
572 577 1.305381 CCTTCACCTCTCCGGGACT 60.305 63.158 0.00 0.00 36.97 3.85
573 578 1.324005 CCTTCACCTCTCCGGGACTC 61.324 65.000 0.00 0.00 36.97 3.36
574 579 1.305046 TTCACCTCTCCGGGACTCC 60.305 63.158 0.00 0.00 36.97 3.85
575 580 2.760385 CACCTCTCCGGGACTCCC 60.760 72.222 0.00 3.63 41.09 4.30
576 581 2.947785 ACCTCTCCGGGACTCCCT 60.948 66.667 12.62 0.00 42.67 4.20
577 582 2.443016 CCTCTCCGGGACTCCCTG 60.443 72.222 12.62 5.85 42.67 4.45
578 583 3.151022 CTCTCCGGGACTCCCTGC 61.151 72.222 12.62 0.00 42.67 4.85
579 584 4.779733 TCTCCGGGACTCCCTGCC 62.780 72.222 12.62 0.00 42.67 4.85
598 603 4.171103 GGCGCCGGGTATCCAGTT 62.171 66.667 12.58 0.00 0.00 3.16
599 604 2.124860 GCGCCGGGTATCCAGTTT 60.125 61.111 2.18 0.00 0.00 2.66
600 605 1.747745 GCGCCGGGTATCCAGTTTT 60.748 57.895 2.18 0.00 0.00 2.43
601 606 0.462403 GCGCCGGGTATCCAGTTTTA 60.462 55.000 2.18 0.00 0.00 1.52
602 607 1.812708 GCGCCGGGTATCCAGTTTTAT 60.813 52.381 2.18 0.00 0.00 1.40
603 608 2.140717 CGCCGGGTATCCAGTTTTATC 58.859 52.381 2.18 0.00 0.00 1.75
604 609 2.484065 CGCCGGGTATCCAGTTTTATCA 60.484 50.000 2.18 0.00 0.00 2.15
605 610 3.139077 GCCGGGTATCCAGTTTTATCAG 58.861 50.000 2.18 0.00 0.00 2.90
606 611 3.740115 CCGGGTATCCAGTTTTATCAGG 58.260 50.000 0.00 0.00 0.00 3.86
607 612 3.496160 CCGGGTATCCAGTTTTATCAGGG 60.496 52.174 0.00 0.00 0.00 4.45
608 613 3.135895 CGGGTATCCAGTTTTATCAGGGT 59.864 47.826 0.00 0.00 0.00 4.34
609 614 4.384868 CGGGTATCCAGTTTTATCAGGGTT 60.385 45.833 0.00 0.00 0.00 4.11
610 615 5.516044 GGGTATCCAGTTTTATCAGGGTTT 58.484 41.667 0.00 0.00 0.00 3.27
611 616 5.593095 GGGTATCCAGTTTTATCAGGGTTTC 59.407 44.000 0.00 0.00 0.00 2.78
612 617 6.424032 GGTATCCAGTTTTATCAGGGTTTCT 58.576 40.000 0.00 0.00 0.00 2.52
613 618 6.890268 GGTATCCAGTTTTATCAGGGTTTCTT 59.110 38.462 0.00 0.00 0.00 2.52
614 619 7.396339 GGTATCCAGTTTTATCAGGGTTTCTTT 59.604 37.037 0.00 0.00 0.00 2.52
615 620 7.855784 ATCCAGTTTTATCAGGGTTTCTTTT 57.144 32.000 0.00 0.00 0.00 2.27
616 621 8.950007 ATCCAGTTTTATCAGGGTTTCTTTTA 57.050 30.769 0.00 0.00 0.00 1.52
617 622 8.404107 TCCAGTTTTATCAGGGTTTCTTTTAG 57.596 34.615 0.00 0.00 0.00 1.85
618 623 8.221944 TCCAGTTTTATCAGGGTTTCTTTTAGA 58.778 33.333 0.00 0.00 0.00 2.10
619 624 8.856103 CCAGTTTTATCAGGGTTTCTTTTAGAA 58.144 33.333 0.00 0.00 31.28 2.10
625 630 6.084326 TCAGGGTTTCTTTTAGAAATGTGC 57.916 37.500 5.28 0.00 44.94 4.57
626 631 5.596361 TCAGGGTTTCTTTTAGAAATGTGCA 59.404 36.000 5.28 0.00 44.94 4.57
627 632 5.922544 CAGGGTTTCTTTTAGAAATGTGCAG 59.077 40.000 5.28 0.00 44.94 4.41
628 633 5.598417 AGGGTTTCTTTTAGAAATGTGCAGT 59.402 36.000 5.28 0.00 44.94 4.40
629 634 5.691754 GGGTTTCTTTTAGAAATGTGCAGTG 59.308 40.000 5.28 0.00 44.94 3.66
630 635 6.460953 GGGTTTCTTTTAGAAATGTGCAGTGA 60.461 38.462 5.28 0.00 44.94 3.41
631 636 7.147976 GGTTTCTTTTAGAAATGTGCAGTGAT 58.852 34.615 5.28 0.00 44.94 3.06
632 637 8.296713 GGTTTCTTTTAGAAATGTGCAGTGATA 58.703 33.333 5.28 0.00 44.94 2.15
633 638 9.118236 GTTTCTTTTAGAAATGTGCAGTGATAC 57.882 33.333 5.28 0.00 44.94 2.24
634 639 7.977789 TCTTTTAGAAATGTGCAGTGATACA 57.022 32.000 0.00 0.00 0.00 2.29
635 640 7.806690 TCTTTTAGAAATGTGCAGTGATACAC 58.193 34.615 0.00 0.00 37.31 2.90
643 648 5.107109 TGTGCAGTGATACACAATTTCAC 57.893 39.130 0.00 0.00 43.48 3.18
645 650 5.049474 TGTGCAGTGATACACAATTTCACTC 60.049 40.000 6.74 4.20 45.16 3.51
646 651 5.180117 GTGCAGTGATACACAATTTCACTCT 59.820 40.000 6.74 0.00 45.16 3.24
647 652 6.368791 GTGCAGTGATACACAATTTCACTCTA 59.631 38.462 6.74 0.00 45.16 2.43
648 653 6.368791 TGCAGTGATACACAATTTCACTCTAC 59.631 38.462 6.74 2.14 45.16 2.59
649 654 6.183360 GCAGTGATACACAATTTCACTCTACC 60.183 42.308 6.74 0.00 45.16 3.18
650 655 6.035005 CAGTGATACACAATTTCACTCTACCG 59.965 42.308 6.74 0.00 45.16 4.02
651 656 4.868171 TGATACACAATTTCACTCTACCGC 59.132 41.667 0.00 0.00 0.00 5.68
652 657 2.423577 ACACAATTTCACTCTACCGCC 58.576 47.619 0.00 0.00 0.00 6.13
653 658 1.393539 CACAATTTCACTCTACCGCCG 59.606 52.381 0.00 0.00 0.00 6.46
654 659 1.006832 CAATTTCACTCTACCGCCGG 58.993 55.000 0.00 0.00 0.00 6.13
655 660 0.899720 AATTTCACTCTACCGCCGGA 59.100 50.000 11.71 0.00 0.00 5.14
656 661 0.460311 ATTTCACTCTACCGCCGGAG 59.540 55.000 11.71 0.00 35.86 4.63
657 662 0.896940 TTTCACTCTACCGCCGGAGT 60.897 55.000 11.71 3.70 42.67 3.85
658 663 1.310933 TTCACTCTACCGCCGGAGTC 61.311 60.000 11.71 0.00 40.33 3.36
659 664 2.823147 ACTCTACCGCCGGAGTCG 60.823 66.667 11.71 0.00 38.25 4.18
669 674 4.477975 CGGAGTCGGAGGCACGTC 62.478 72.222 0.00 0.00 34.94 4.34
670 675 4.477975 GGAGTCGGAGGCACGTCG 62.478 72.222 0.00 0.00 34.94 5.12
688 693 4.394078 CCGACGAGCCGACGTTGA 62.394 66.667 3.74 0.00 46.63 3.18
689 694 3.164011 CGACGAGCCGACGTTGAC 61.164 66.667 3.74 0.00 46.63 3.18
690 695 3.164011 GACGAGCCGACGTTGACG 61.164 66.667 3.74 9.57 46.52 4.35
693 698 3.764049 GAGCCGACGTTGACGCAC 61.764 66.667 3.74 0.00 44.43 5.34
696 701 3.103911 CCGACGTTGACGCACCTC 61.104 66.667 3.74 0.00 44.43 3.85
697 702 3.103911 CGACGTTGACGCACCTCC 61.104 66.667 0.00 0.00 44.43 4.30
698 703 2.737376 GACGTTGACGCACCTCCC 60.737 66.667 3.05 0.00 44.43 4.30
699 704 3.509137 GACGTTGACGCACCTCCCA 62.509 63.158 3.05 0.00 44.43 4.37
700 705 3.041940 CGTTGACGCACCTCCCAC 61.042 66.667 0.00 0.00 0.00 4.61
701 706 2.668550 GTTGACGCACCTCCCACC 60.669 66.667 0.00 0.00 0.00 4.61
702 707 2.847234 TTGACGCACCTCCCACCT 60.847 61.111 0.00 0.00 0.00 4.00
703 708 2.879233 TTGACGCACCTCCCACCTC 61.879 63.158 0.00 0.00 0.00 3.85
704 709 2.997897 GACGCACCTCCCACCTCT 60.998 66.667 0.00 0.00 0.00 3.69
705 710 3.302347 GACGCACCTCCCACCTCTG 62.302 68.421 0.00 0.00 0.00 3.35
706 711 4.767255 CGCACCTCCCACCTCTGC 62.767 72.222 0.00 0.00 0.00 4.26
707 712 4.767255 GCACCTCCCACCTCTGCG 62.767 72.222 0.00 0.00 0.00 5.18
708 713 4.087892 CACCTCCCACCTCTGCGG 62.088 72.222 0.00 0.00 39.35 5.69
757 762 1.592669 CGCCTCCTATCCAGCAACG 60.593 63.158 0.00 0.00 0.00 4.10
835 840 4.081586 GTCCAATTCGAGAAGGACTAGGTT 60.082 45.833 19.12 0.00 45.46 3.50
836 841 4.530946 TCCAATTCGAGAAGGACTAGGTTT 59.469 41.667 0.00 0.00 0.00 3.27
837 842 4.631813 CCAATTCGAGAAGGACTAGGTTTG 59.368 45.833 0.00 0.00 0.00 2.93
838 843 5.238583 CAATTCGAGAAGGACTAGGTTTGT 58.761 41.667 0.00 0.00 0.00 2.83
839 844 4.950205 TTCGAGAAGGACTAGGTTTGTT 57.050 40.909 0.00 0.00 0.00 2.83
850 855 1.308998 AGGTTTGTTTCCGAGCACAG 58.691 50.000 0.00 0.00 0.00 3.66
920 925 4.373116 GACTGGTTCGGCCGCTGA 62.373 66.667 23.51 5.84 41.21 4.26
921 926 3.876589 GACTGGTTCGGCCGCTGAA 62.877 63.158 23.51 10.72 41.21 3.02
922 927 3.423154 CTGGTTCGGCCGCTGAAC 61.423 66.667 29.60 29.60 45.80 3.18
923 928 3.883744 CTGGTTCGGCCGCTGAACT 62.884 63.158 33.51 0.00 45.80 3.01
924 929 3.119096 GGTTCGGCCGCTGAACTC 61.119 66.667 33.51 23.60 45.80 3.01
925 930 2.357034 GTTCGGCCGCTGAACTCA 60.357 61.111 29.97 0.00 43.89 3.41
926 931 1.959226 GTTCGGCCGCTGAACTCAA 60.959 57.895 29.97 3.41 43.89 3.02
927 932 1.959226 TTCGGCCGCTGAACTCAAC 60.959 57.895 23.51 0.00 0.00 3.18
928 933 2.357517 CGGCCGCTGAACTCAACT 60.358 61.111 14.67 0.00 0.00 3.16
1006 1015 1.218047 CTCGTCTTCGCAATGGGGA 59.782 57.895 0.00 0.00 36.96 4.81
1089 1098 0.477597 TCACCAAGTGGAGGGGGATT 60.478 55.000 3.83 0.00 38.94 3.01
1092 1101 0.929244 CCAAGTGGAGGGGGATTGAT 59.071 55.000 0.00 0.00 37.39 2.57
1157 1169 1.685224 GGGTGCCATCTGAGGTCAA 59.315 57.895 0.00 0.00 0.00 3.18
1188 1204 3.768757 CAGACTTGACCTCCTCATCTCTT 59.231 47.826 0.00 0.00 0.00 2.85
1199 1215 5.305128 CCTCCTCATCTCTTTGCTATCTCTT 59.695 44.000 0.00 0.00 0.00 2.85
1238 1254 4.067896 CACTGTGCAAGATTTAGGACTGT 58.932 43.478 0.00 0.00 38.41 3.55
1307 1323 1.183549 TTGTAGCCCTCGAAGGAGTC 58.816 55.000 3.61 0.00 37.67 3.36
1310 1326 2.175069 TGTAGCCCTCGAAGGAGTCTAT 59.825 50.000 3.61 0.00 37.67 1.98
1326 1342 3.130516 AGTCTATCGAATTCGTGCAGGAA 59.869 43.478 25.93 22.83 40.80 3.36
1346 1362 4.028490 CAGGTGGGCGGGCTGTTA 62.028 66.667 0.26 0.00 0.00 2.41
1347 1363 3.015145 AGGTGGGCGGGCTGTTAT 61.015 61.111 0.26 0.00 0.00 1.89
1396 1420 5.141568 TGAAGTTGCGCGTTTTAGTAATTC 58.858 37.500 8.43 1.72 0.00 2.17
1406 1434 6.461698 CGCGTTTTAGTAATTCACTGAATGTC 59.538 38.462 4.99 2.46 38.24 3.06
1458 1486 1.500474 GACCCTGTCCCTGATGATGA 58.500 55.000 0.00 0.00 0.00 2.92
1464 1492 3.371273 CCTGTCCCTGATGATGATGTTGT 60.371 47.826 0.00 0.00 0.00 3.32
1467 1495 4.141642 TGTCCCTGATGATGATGTTGTAGG 60.142 45.833 0.00 0.00 0.00 3.18
1501 1529 5.623169 TCGGTAAGTTTTCAGTGGGTATTT 58.377 37.500 0.00 0.00 0.00 1.40
1505 1533 7.551617 CGGTAAGTTTTCAGTGGGTATTTCTAT 59.448 37.037 0.00 0.00 0.00 1.98
1563 1591 1.767759 ATTACATTGCTCTGCACCCC 58.232 50.000 0.00 0.00 38.71 4.95
1567 1595 2.915504 ATTGCTCTGCACCCCAGCT 61.916 57.895 0.00 0.00 41.50 4.24
1616 1646 9.817809 CTATCCTATAAAAGTGTAGCAGTTTCA 57.182 33.333 2.88 0.00 36.18 2.69
1620 1650 8.946085 CCTATAAAAGTGTAGCAGTTTCATCAA 58.054 33.333 2.88 0.00 36.18 2.57
1623 1653 9.846248 ATAAAAGTGTAGCAGTTTCATCAAATC 57.154 29.630 2.88 0.00 36.18 2.17
1624 1654 6.882610 AAGTGTAGCAGTTTCATCAAATCA 57.117 33.333 0.00 0.00 0.00 2.57
1625 1655 7.458409 AAGTGTAGCAGTTTCATCAAATCAT 57.542 32.000 0.00 0.00 0.00 2.45
1626 1656 7.458409 AGTGTAGCAGTTTCATCAAATCATT 57.542 32.000 0.00 0.00 0.00 2.57
1636 1666 7.649306 AGTTTCATCAAATCATTAAATAGCCGC 59.351 33.333 0.00 0.00 0.00 6.53
1641 1672 7.017498 TCAAATCATTAAATAGCCGCGTAAA 57.983 32.000 4.92 0.00 0.00 2.01
1644 1675 6.795098 ATCATTAAATAGCCGCGTAAATCA 57.205 33.333 4.92 0.00 0.00 2.57
1659 1690 6.460987 GCGTAAATCAGCAATTTGAATTGAC 58.539 36.000 18.03 10.37 46.72 3.18
1663 1694 9.585099 GTAAATCAGCAATTTGAATTGACCATA 57.415 29.630 18.03 3.13 46.72 2.74
1714 1745 7.076362 GCAAATCTATTATGAGCACACATGAG 58.924 38.462 0.00 0.00 0.00 2.90
1742 1774 9.686683 AGAAATGTAAATATCTTGTAGCAACCT 57.313 29.630 0.00 0.00 0.00 3.50
1754 1786 4.693283 TGTAGCAACCTATAGTGATGCAC 58.307 43.478 18.66 15.40 39.42 4.57
1761 1793 2.289010 CCTATAGTGATGCACGATGCCA 60.289 50.000 7.38 0.00 44.23 4.92
1815 1847 2.630580 TGATTTTGGGGTGGTAAAGCAC 59.369 45.455 3.72 3.72 0.00 4.40
1833 1865 3.197766 AGCACGGAATAGAAAGGATCACA 59.802 43.478 0.00 0.00 0.00 3.58
1849 1881 0.742505 CACATTGGCCTCGCATCATT 59.257 50.000 3.32 0.00 0.00 2.57
1996 3023 4.677250 GCCAGCCATGATTTCTTTCTCTTG 60.677 45.833 0.00 0.00 0.00 3.02
2143 3172 7.934120 ACATTACTGGATATTTACTTCCTCTGC 59.066 37.037 0.00 0.00 32.95 4.26
2163 3193 3.057596 TGCTTCCTTTTTGATAGCCAACG 60.058 43.478 0.00 0.00 33.85 4.10
2192 3222 1.078143 GTCCTTAGGTGGGCAGCTG 60.078 63.158 10.11 10.11 39.78 4.24
2296 3326 4.398358 TCGAGAGGTATGGACTGTTTGTAG 59.602 45.833 0.00 0.00 0.00 2.74
2302 3332 2.380084 TGGACTGTTTGTAGCCGATC 57.620 50.000 0.00 0.00 0.00 3.69
2303 3333 1.621317 TGGACTGTTTGTAGCCGATCA 59.379 47.619 0.00 0.00 0.00 2.92
2370 3400 8.317679 ACTAATCAGTTGAAAGCTTAGACTCAT 58.682 33.333 0.00 0.00 0.00 2.90
2497 3527 7.402054 TGCTTCTTCATAAACTGGGAGATAAA 58.598 34.615 0.00 0.00 0.00 1.40
2606 3636 5.046950 AGTTCATAGGTTCACTCTTCTCCAC 60.047 44.000 0.00 0.00 0.00 4.02
2667 3699 4.237724 GTCCACCTCTTATTTTGCTTTGC 58.762 43.478 0.00 0.00 0.00 3.68
2812 3847 5.867903 TTTATCCTTGGGCATGTAATTGG 57.132 39.130 0.00 0.00 0.00 3.16
2966 4001 2.028112 AGTCAATGCTCGGCTCAGTTAA 60.028 45.455 0.00 0.00 0.00 2.01
3073 5569 3.194116 AGGTGCTGCAGAATGGTATTTTG 59.806 43.478 20.43 0.00 35.86 2.44
3107 5604 1.704641 ACCTTGGAGTTTTGAAGGCC 58.295 50.000 0.00 0.00 40.06 5.19
3165 5662 2.683152 GCTTGGATGGCTCATCTGAACT 60.683 50.000 12.89 0.00 40.39 3.01
3166 5663 3.432749 GCTTGGATGGCTCATCTGAACTA 60.433 47.826 12.89 0.00 40.39 2.24
3167 5664 3.827008 TGGATGGCTCATCTGAACTAC 57.173 47.619 12.89 0.00 40.39 2.73
3168 5665 3.378512 TGGATGGCTCATCTGAACTACT 58.621 45.455 12.89 0.00 40.39 2.57
3169 5666 3.386078 TGGATGGCTCATCTGAACTACTC 59.614 47.826 12.89 0.00 40.39 2.59
3170 5667 3.551863 GGATGGCTCATCTGAACTACTCG 60.552 52.174 12.89 0.00 40.39 4.18
3261 5761 3.073274 ACCTCACTGCAAATAAGGTCC 57.927 47.619 4.38 0.00 35.42 4.46
3332 5832 5.689068 GTGTTCTCATTGCCAGAAAGAAAAG 59.311 40.000 0.00 0.00 31.60 2.27
3333 5833 5.221303 TGTTCTCATTGCCAGAAAGAAAAGG 60.221 40.000 0.00 0.00 31.60 3.11
3335 5835 2.299867 TCATTGCCAGAAAGAAAAGGCC 59.700 45.455 0.00 0.00 46.45 5.19
3390 5897 6.485648 TGACAATATTCAGCATCTGAGAATGG 59.514 38.462 0.00 0.00 41.75 3.16
3400 5907 5.531659 AGCATCTGAGAATGGATTTGATGAC 59.468 40.000 0.00 0.00 33.74 3.06
3413 5920 3.748863 GATGACTCCATCGTGCAGT 57.251 52.632 0.00 0.00 39.70 4.40
3415 5922 1.929836 GATGACTCCATCGTGCAGTTC 59.070 52.381 0.00 0.00 39.70 3.01
3417 5924 0.037326 GACTCCATCGTGCAGTTCCA 60.037 55.000 0.00 0.00 0.00 3.53
3418 5925 0.615331 ACTCCATCGTGCAGTTCCAT 59.385 50.000 0.00 0.00 0.00 3.41
3419 5926 1.003580 ACTCCATCGTGCAGTTCCATT 59.996 47.619 0.00 0.00 0.00 3.16
3420 5927 1.667724 CTCCATCGTGCAGTTCCATTC 59.332 52.381 0.00 0.00 0.00 2.67
3421 5928 0.734889 CCATCGTGCAGTTCCATTCC 59.265 55.000 0.00 0.00 0.00 3.01
3422 5929 1.679944 CCATCGTGCAGTTCCATTCCT 60.680 52.381 0.00 0.00 0.00 3.36
3423 5930 2.419990 CCATCGTGCAGTTCCATTCCTA 60.420 50.000 0.00 0.00 0.00 2.94
3424 5931 2.380084 TCGTGCAGTTCCATTCCTAC 57.620 50.000 0.00 0.00 0.00 3.18
3425 5932 1.621317 TCGTGCAGTTCCATTCCTACA 59.379 47.619 0.00 0.00 0.00 2.74
3426 5933 2.236146 TCGTGCAGTTCCATTCCTACAT 59.764 45.455 0.00 0.00 0.00 2.29
3427 5934 3.009723 CGTGCAGTTCCATTCCTACATT 58.990 45.455 0.00 0.00 0.00 2.71
3428 5935 4.081365 TCGTGCAGTTCCATTCCTACATTA 60.081 41.667 0.00 0.00 0.00 1.90
3429 5936 4.634004 CGTGCAGTTCCATTCCTACATTAA 59.366 41.667 0.00 0.00 0.00 1.40
3430 5937 5.447279 CGTGCAGTTCCATTCCTACATTAAC 60.447 44.000 0.00 0.00 0.00 2.01
3431 5938 4.947388 TGCAGTTCCATTCCTACATTAACC 59.053 41.667 0.00 0.00 0.00 2.85
3432 5939 4.947388 GCAGTTCCATTCCTACATTAACCA 59.053 41.667 0.00 0.00 0.00 3.67
3433 5940 5.417580 GCAGTTCCATTCCTACATTAACCAA 59.582 40.000 0.00 0.00 0.00 3.67
3434 5941 6.625081 GCAGTTCCATTCCTACATTAACCAAC 60.625 42.308 0.00 0.00 0.00 3.77
3435 5942 6.432783 CAGTTCCATTCCTACATTAACCAACA 59.567 38.462 0.00 0.00 0.00 3.33
3436 5943 7.122650 CAGTTCCATTCCTACATTAACCAACAT 59.877 37.037 0.00 0.00 0.00 2.71
3437 5944 7.122650 AGTTCCATTCCTACATTAACCAACATG 59.877 37.037 0.00 0.00 0.00 3.21
3438 5945 5.890985 TCCATTCCTACATTAACCAACATGG 59.109 40.000 0.00 0.00 45.02 3.66
3448 5955 3.065575 CCAACATGGTCTACGAGGC 57.934 57.895 0.00 0.00 31.35 4.70
3449 5956 0.537188 CCAACATGGTCTACGAGGCT 59.463 55.000 0.00 0.00 31.35 4.58
3450 5957 1.754803 CCAACATGGTCTACGAGGCTA 59.245 52.381 0.00 0.00 31.35 3.93
3451 5958 2.223829 CCAACATGGTCTACGAGGCTAG 60.224 54.545 0.00 0.00 31.35 3.42
3452 5959 1.693627 ACATGGTCTACGAGGCTAGG 58.306 55.000 0.00 0.00 0.00 3.02
3453 5960 1.214673 ACATGGTCTACGAGGCTAGGA 59.785 52.381 0.00 0.00 0.00 2.94
3454 5961 1.883275 CATGGTCTACGAGGCTAGGAG 59.117 57.143 0.00 0.00 0.00 3.69
3455 5962 1.210538 TGGTCTACGAGGCTAGGAGA 58.789 55.000 5.33 5.33 0.00 3.71
3456 5963 1.562942 TGGTCTACGAGGCTAGGAGAA 59.437 52.381 11.42 0.00 0.00 2.87
3457 5964 2.025605 TGGTCTACGAGGCTAGGAGAAA 60.026 50.000 11.42 0.34 0.00 2.52
3458 5965 2.358582 GGTCTACGAGGCTAGGAGAAAC 59.641 54.545 11.42 4.24 0.00 2.78
3459 5966 3.015327 GTCTACGAGGCTAGGAGAAACA 58.985 50.000 11.42 0.00 0.00 2.83
3460 5967 3.065648 GTCTACGAGGCTAGGAGAAACAG 59.934 52.174 11.42 0.00 0.00 3.16
3461 5968 2.217510 ACGAGGCTAGGAGAAACAGA 57.782 50.000 0.00 0.00 0.00 3.41
3462 5969 1.819903 ACGAGGCTAGGAGAAACAGAC 59.180 52.381 0.00 0.00 0.00 3.51
3463 5970 1.819288 CGAGGCTAGGAGAAACAGACA 59.181 52.381 0.00 0.00 0.00 3.41
3464 5971 2.428890 CGAGGCTAGGAGAAACAGACAT 59.571 50.000 0.00 0.00 0.00 3.06
3465 5972 3.736433 CGAGGCTAGGAGAAACAGACATG 60.736 52.174 0.00 0.00 0.00 3.21
3466 5973 2.503356 AGGCTAGGAGAAACAGACATGG 59.497 50.000 0.00 0.00 0.00 3.66
3467 5974 2.237392 GGCTAGGAGAAACAGACATGGT 59.763 50.000 0.00 0.00 0.00 3.55
3468 5975 3.265791 GCTAGGAGAAACAGACATGGTG 58.734 50.000 0.00 0.00 0.00 4.17
3469 5976 3.055819 GCTAGGAGAAACAGACATGGTGA 60.056 47.826 0.00 0.00 0.00 4.02
3470 5977 3.409026 AGGAGAAACAGACATGGTGAC 57.591 47.619 0.00 0.00 0.00 3.67
3483 5990 2.543777 TGGTGACAACTTGGACTAGC 57.456 50.000 0.00 0.00 37.44 3.42
3484 5991 1.270094 TGGTGACAACTTGGACTAGCG 60.270 52.381 0.00 0.00 37.44 4.26
3485 5992 1.000506 GGTGACAACTTGGACTAGCGA 59.999 52.381 0.00 0.00 0.00 4.93
3486 5993 2.329379 GTGACAACTTGGACTAGCGAG 58.671 52.381 0.00 0.00 0.00 5.03
3487 5994 2.030185 GTGACAACTTGGACTAGCGAGA 60.030 50.000 0.00 0.00 0.00 4.04
3488 5995 2.626266 TGACAACTTGGACTAGCGAGAA 59.374 45.455 0.00 0.00 0.00 2.87
3489 5996 3.246619 GACAACTTGGACTAGCGAGAAG 58.753 50.000 0.00 0.00 0.00 2.85
3511 6018 2.760385 GGGGACGAGGGAGACAGG 60.760 72.222 0.00 0.00 0.00 4.00
3512 6019 2.760385 GGGACGAGGGAGACAGGG 60.760 72.222 0.00 0.00 0.00 4.45
3513 6020 2.760385 GGACGAGGGAGACAGGGG 60.760 72.222 0.00 0.00 0.00 4.79
3514 6021 2.359404 GACGAGGGAGACAGGGGA 59.641 66.667 0.00 0.00 0.00 4.81
3515 6022 1.755008 GACGAGGGAGACAGGGGAG 60.755 68.421 0.00 0.00 0.00 4.30
3516 6023 2.443016 CGAGGGAGACAGGGGAGG 60.443 72.222 0.00 0.00 0.00 4.30
3517 6024 2.997584 CGAGGGAGACAGGGGAGGA 61.998 68.421 0.00 0.00 0.00 3.71
3518 6025 1.075600 GAGGGAGACAGGGGAGGAG 60.076 68.421 0.00 0.00 0.00 3.69
3519 6026 2.766229 GGGAGACAGGGGAGGAGC 60.766 72.222 0.00 0.00 0.00 4.70
3520 6027 2.766229 GGAGACAGGGGAGGAGCC 60.766 72.222 0.00 0.00 0.00 4.70
3521 6028 2.039624 GAGACAGGGGAGGAGCCA 59.960 66.667 0.00 0.00 38.95 4.75
3522 6029 2.284995 AGACAGGGGAGGAGCCAC 60.285 66.667 0.00 0.00 41.99 5.01
3523 6030 3.403558 GACAGGGGAGGAGCCACC 61.404 72.222 0.00 0.00 43.05 4.61
3533 6040 4.779733 GAGCCACCCTCCCTCCGA 62.780 72.222 0.00 0.00 34.35 4.55
3534 6041 4.787280 AGCCACCCTCCCTCCGAG 62.787 72.222 0.00 0.00 38.46 4.63
3548 6055 2.027605 CGAGCGCCGGTATGATGT 59.972 61.111 2.29 0.00 33.91 3.06
3549 6056 2.302952 CGAGCGCCGGTATGATGTG 61.303 63.158 2.29 0.00 33.91 3.21
3550 6057 1.956170 GAGCGCCGGTATGATGTGG 60.956 63.158 2.29 0.00 0.00 4.17
3551 6058 2.972505 GCGCCGGTATGATGTGGG 60.973 66.667 1.90 0.00 0.00 4.61
3552 6059 2.504032 CGCCGGTATGATGTGGGT 59.496 61.111 1.90 0.00 0.00 4.51
3553 6060 1.887242 CGCCGGTATGATGTGGGTG 60.887 63.158 1.90 0.00 0.00 4.61
3554 6061 1.525995 GCCGGTATGATGTGGGTGG 60.526 63.158 1.90 0.00 0.00 4.61
3555 6062 1.148273 CCGGTATGATGTGGGTGGG 59.852 63.158 0.00 0.00 0.00 4.61
3556 6063 1.632018 CCGGTATGATGTGGGTGGGT 61.632 60.000 0.00 0.00 0.00 4.51
3557 6064 0.463654 CGGTATGATGTGGGTGGGTG 60.464 60.000 0.00 0.00 0.00 4.61
3558 6065 0.916086 GGTATGATGTGGGTGGGTGA 59.084 55.000 0.00 0.00 0.00 4.02
3559 6066 1.408266 GGTATGATGTGGGTGGGTGAC 60.408 57.143 0.00 0.00 0.00 3.67
3576 6083 3.758172 CCGGTGGTCTGGTTTTGG 58.242 61.111 0.00 0.00 35.48 3.28
3577 6084 1.901464 CCGGTGGTCTGGTTTTGGG 60.901 63.158 0.00 0.00 35.48 4.12
3578 6085 2.561037 CGGTGGTCTGGTTTTGGGC 61.561 63.158 0.00 0.00 0.00 5.36
3579 6086 2.207229 GGTGGTCTGGTTTTGGGCC 61.207 63.158 0.00 0.00 0.00 5.80
3580 6087 2.203422 TGGTCTGGTTTTGGGCCG 60.203 61.111 0.00 0.00 0.00 6.13
3581 6088 3.680786 GGTCTGGTTTTGGGCCGC 61.681 66.667 0.00 0.00 0.00 6.53
3582 6089 4.038080 GTCTGGTTTTGGGCCGCG 62.038 66.667 0.00 0.00 0.00 6.46
3587 6094 3.607661 GTTTTGGGCCGCGGGAAA 61.608 61.111 29.38 1.73 0.00 3.13
3588 6095 3.607661 TTTTGGGCCGCGGGAAAC 61.608 61.111 29.38 9.97 0.00 2.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 4.853050 GCCCATGCAGCGAGCTCT 62.853 66.667 12.85 0.00 45.94 4.09
22 23 1.775385 TCATCTGATCTACCGTGCCA 58.225 50.000 0.00 0.00 0.00 4.92
30 31 6.669591 TCTCTTTCCAAGGTTCATCTGATCTA 59.330 38.462 0.00 0.00 0.00 1.98
52 53 6.243811 ACCTCGTATTACATCGATTCTCTC 57.756 41.667 0.00 0.00 35.57 3.20
54 55 7.131498 AGTACCTCGTATTACATCGATTCTC 57.869 40.000 0.00 0.00 35.57 2.87
58 59 6.072618 CCTCAAGTACCTCGTATTACATCGAT 60.073 42.308 0.00 0.00 35.57 3.59
59 60 5.237996 CCTCAAGTACCTCGTATTACATCGA 59.762 44.000 0.00 0.00 34.88 3.59
60 61 5.450171 CCTCAAGTACCTCGTATTACATCG 58.550 45.833 0.00 0.00 0.00 3.84
61 62 5.278858 CCCCTCAAGTACCTCGTATTACATC 60.279 48.000 0.00 0.00 0.00 3.06
76 77 1.474332 TACGAAACGGCCCCTCAAGT 61.474 55.000 0.00 0.00 0.00 3.16
82 83 0.890542 AAGGTTTACGAAACGGCCCC 60.891 55.000 0.00 0.00 42.29 5.80
101 102 2.359404 GGAGTCCCGGAGAGGTGA 59.641 66.667 0.73 0.00 38.74 4.02
123 128 4.609018 CTGGATACCCGGCGCAGG 62.609 72.222 20.64 20.64 34.29 4.85
124 129 2.869503 AAACTGGATACCCGGCGCAG 62.870 60.000 10.83 4.65 42.81 5.18
164 169 5.107109 GTGAAATTGTGTATCACTGCACA 57.893 39.130 0.85 0.00 44.82 4.57
170 175 5.671329 GCGGAAGAGTGAAATTGTGTATCAC 60.671 44.000 0.00 0.00 42.91 3.06
171 176 4.391830 GCGGAAGAGTGAAATTGTGTATCA 59.608 41.667 0.00 0.00 0.00 2.15
172 177 4.201822 GGCGGAAGAGTGAAATTGTGTATC 60.202 45.833 0.00 0.00 0.00 2.24
173 178 3.689649 GGCGGAAGAGTGAAATTGTGTAT 59.310 43.478 0.00 0.00 0.00 2.29
180 185 0.108138 CTCCGGCGGAAGAGTGAAAT 60.108 55.000 30.59 0.00 0.00 2.17
181 186 1.292223 CTCCGGCGGAAGAGTGAAA 59.708 57.895 30.59 3.78 0.00 2.69
184 189 2.182030 GACTCCGGCGGAAGAGTG 59.818 66.667 30.59 19.81 43.32 3.51
262 267 1.749258 CTTAGGAAACGGCTGGGGC 60.749 63.158 0.00 0.00 37.82 5.80
263 268 0.326927 TTCTTAGGAAACGGCTGGGG 59.673 55.000 0.00 0.00 0.00 4.96
264 269 2.194201 TTTCTTAGGAAACGGCTGGG 57.806 50.000 0.00 0.00 36.63 4.45
265 270 4.459337 AGATTTTTCTTAGGAAACGGCTGG 59.541 41.667 0.00 0.00 40.63 4.85
266 271 5.629079 AGATTTTTCTTAGGAAACGGCTG 57.371 39.130 0.00 0.00 40.63 4.85
267 272 5.535030 ACAAGATTTTTCTTAGGAAACGGCT 59.465 36.000 0.00 0.00 40.63 5.52
268 273 5.769367 ACAAGATTTTTCTTAGGAAACGGC 58.231 37.500 0.00 0.00 40.63 5.68
269 274 8.319143 TCTACAAGATTTTTCTTAGGAAACGG 57.681 34.615 0.00 0.00 40.63 4.44
322 327 9.702494 CAATCAAAGAGCTCTAAAGGAATTTTT 57.298 29.630 18.59 0.00 0.00 1.94
323 328 8.309656 CCAATCAAAGAGCTCTAAAGGAATTTT 58.690 33.333 18.59 0.64 0.00 1.82
324 329 7.452813 ACCAATCAAAGAGCTCTAAAGGAATTT 59.547 33.333 18.59 1.46 0.00 1.82
325 330 6.950619 ACCAATCAAAGAGCTCTAAAGGAATT 59.049 34.615 18.59 2.29 0.00 2.17
326 331 6.488715 ACCAATCAAAGAGCTCTAAAGGAAT 58.511 36.000 18.59 2.77 0.00 3.01
327 332 5.880901 ACCAATCAAAGAGCTCTAAAGGAA 58.119 37.500 18.59 0.03 0.00 3.36
328 333 5.505181 ACCAATCAAAGAGCTCTAAAGGA 57.495 39.130 18.59 12.38 0.00 3.36
329 334 6.644347 TCTACCAATCAAAGAGCTCTAAAGG 58.356 40.000 18.59 15.03 0.00 3.11
330 335 8.610896 CATTCTACCAATCAAAGAGCTCTAAAG 58.389 37.037 18.59 10.08 0.00 1.85
331 336 8.321353 TCATTCTACCAATCAAAGAGCTCTAAA 58.679 33.333 18.59 5.84 0.00 1.85
332 337 7.851228 TCATTCTACCAATCAAAGAGCTCTAA 58.149 34.615 18.59 6.24 0.00 2.10
333 338 7.423844 TCATTCTACCAATCAAAGAGCTCTA 57.576 36.000 18.59 0.95 0.00 2.43
334 339 6.305272 TCATTCTACCAATCAAAGAGCTCT 57.695 37.500 11.45 11.45 0.00 4.09
335 340 6.992063 TTCATTCTACCAATCAAAGAGCTC 57.008 37.500 5.27 5.27 0.00 4.09
336 341 7.067981 GGATTTCATTCTACCAATCAAAGAGCT 59.932 37.037 0.00 0.00 0.00 4.09
337 342 7.067981 AGGATTTCATTCTACCAATCAAAGAGC 59.932 37.037 0.00 0.00 0.00 4.09
338 343 8.517062 AGGATTTCATTCTACCAATCAAAGAG 57.483 34.615 0.00 0.00 0.00 2.85
410 415 9.515226 TGTTTTATTGAGTCTAGGCTAATGTTT 57.485 29.630 0.00 0.00 0.00 2.83
411 416 9.515226 TTGTTTTATTGAGTCTAGGCTAATGTT 57.485 29.630 0.00 0.00 0.00 2.71
412 417 9.515226 TTTGTTTTATTGAGTCTAGGCTAATGT 57.485 29.630 0.00 0.00 0.00 2.71
415 420 9.174166 GGATTTGTTTTATTGAGTCTAGGCTAA 57.826 33.333 0.00 0.00 0.00 3.09
416 421 8.548877 AGGATTTGTTTTATTGAGTCTAGGCTA 58.451 33.333 0.00 0.00 0.00 3.93
417 422 7.406104 AGGATTTGTTTTATTGAGTCTAGGCT 58.594 34.615 0.00 0.00 0.00 4.58
418 423 7.631717 AGGATTTGTTTTATTGAGTCTAGGC 57.368 36.000 0.00 0.00 0.00 3.93
433 438 8.840321 CCTTCGATTCACATTATAGGATTTGTT 58.160 33.333 0.00 0.00 0.00 2.83
434 439 7.445402 CCCTTCGATTCACATTATAGGATTTGT 59.555 37.037 0.00 0.00 0.00 2.83
435 440 7.573843 GCCCTTCGATTCACATTATAGGATTTG 60.574 40.741 0.00 0.00 0.00 2.32
436 441 6.431234 GCCCTTCGATTCACATTATAGGATTT 59.569 38.462 0.00 0.00 0.00 2.17
437 442 5.940470 GCCCTTCGATTCACATTATAGGATT 59.060 40.000 0.00 0.00 0.00 3.01
438 443 5.013079 TGCCCTTCGATTCACATTATAGGAT 59.987 40.000 0.00 0.00 0.00 3.24
439 444 4.346709 TGCCCTTCGATTCACATTATAGGA 59.653 41.667 0.00 0.00 0.00 2.94
440 445 4.641396 TGCCCTTCGATTCACATTATAGG 58.359 43.478 0.00 0.00 0.00 2.57
441 446 6.169094 AGATGCCCTTCGATTCACATTATAG 58.831 40.000 0.00 0.00 0.00 1.31
442 447 6.114187 AGATGCCCTTCGATTCACATTATA 57.886 37.500 0.00 0.00 0.00 0.98
443 448 4.978099 AGATGCCCTTCGATTCACATTAT 58.022 39.130 0.00 0.00 0.00 1.28
444 449 4.422073 AGATGCCCTTCGATTCACATTA 57.578 40.909 0.00 0.00 0.00 1.90
445 450 3.287867 AGATGCCCTTCGATTCACATT 57.712 42.857 0.00 0.00 0.00 2.71
446 451 3.209410 GAAGATGCCCTTCGATTCACAT 58.791 45.455 0.00 0.00 41.54 3.21
447 452 2.632377 GAAGATGCCCTTCGATTCACA 58.368 47.619 0.00 0.00 41.54 3.58
456 461 6.084749 AGGAATAAGAAAGAAGATGCCCTT 57.915 37.500 0.00 0.00 37.93 3.95
457 462 5.723860 AGGAATAAGAAAGAAGATGCCCT 57.276 39.130 0.00 0.00 0.00 5.19
458 463 6.596621 AGTAGGAATAAGAAAGAAGATGCCC 58.403 40.000 0.00 0.00 0.00 5.36
459 464 7.275920 TGAGTAGGAATAAGAAAGAAGATGCC 58.724 38.462 0.00 0.00 0.00 4.40
460 465 8.900983 ATGAGTAGGAATAAGAAAGAAGATGC 57.099 34.615 0.00 0.00 0.00 3.91
523 528 9.520515 GGCATAGGAAAATCATAGGAATAGAAA 57.479 33.333 0.00 0.00 0.00 2.52
524 529 8.894592 AGGCATAGGAAAATCATAGGAATAGAA 58.105 33.333 0.00 0.00 0.00 2.10
525 530 8.454859 AGGCATAGGAAAATCATAGGAATAGA 57.545 34.615 0.00 0.00 0.00 1.98
528 533 9.301897 GTTTAGGCATAGGAAAATCATAGGAAT 57.698 33.333 0.00 0.00 0.00 3.01
529 534 7.724061 GGTTTAGGCATAGGAAAATCATAGGAA 59.276 37.037 0.00 0.00 0.00 3.36
530 535 7.073725 AGGTTTAGGCATAGGAAAATCATAGGA 59.926 37.037 0.00 0.00 0.00 2.94
531 536 7.234355 AGGTTTAGGCATAGGAAAATCATAGG 58.766 38.462 0.00 0.00 0.00 2.57
532 537 8.697507 AAGGTTTAGGCATAGGAAAATCATAG 57.302 34.615 0.00 0.00 0.00 2.23
533 538 8.278639 TGAAGGTTTAGGCATAGGAAAATCATA 58.721 33.333 0.00 0.00 0.00 2.15
534 539 7.068716 GTGAAGGTTTAGGCATAGGAAAATCAT 59.931 37.037 0.00 0.00 0.00 2.45
535 540 6.377146 GTGAAGGTTTAGGCATAGGAAAATCA 59.623 38.462 0.00 0.00 0.00 2.57
536 541 6.183360 GGTGAAGGTTTAGGCATAGGAAAATC 60.183 42.308 0.00 0.00 0.00 2.17
537 542 5.656859 GGTGAAGGTTTAGGCATAGGAAAAT 59.343 40.000 0.00 0.00 0.00 1.82
538 543 5.014202 GGTGAAGGTTTAGGCATAGGAAAA 58.986 41.667 0.00 0.00 0.00 2.29
539 544 4.291249 AGGTGAAGGTTTAGGCATAGGAAA 59.709 41.667 0.00 0.00 0.00 3.13
540 545 3.850173 AGGTGAAGGTTTAGGCATAGGAA 59.150 43.478 0.00 0.00 0.00 3.36
541 546 3.454812 GAGGTGAAGGTTTAGGCATAGGA 59.545 47.826 0.00 0.00 0.00 2.94
542 547 3.456277 AGAGGTGAAGGTTTAGGCATAGG 59.544 47.826 0.00 0.00 0.00 2.57
543 548 4.443598 GGAGAGGTGAAGGTTTAGGCATAG 60.444 50.000 0.00 0.00 0.00 2.23
544 549 3.454812 GGAGAGGTGAAGGTTTAGGCATA 59.545 47.826 0.00 0.00 0.00 3.14
545 550 2.239907 GGAGAGGTGAAGGTTTAGGCAT 59.760 50.000 0.00 0.00 0.00 4.40
546 551 1.628846 GGAGAGGTGAAGGTTTAGGCA 59.371 52.381 0.00 0.00 0.00 4.75
547 552 1.405661 CGGAGAGGTGAAGGTTTAGGC 60.406 57.143 0.00 0.00 0.00 3.93
548 553 1.207329 CCGGAGAGGTGAAGGTTTAGG 59.793 57.143 0.00 0.00 34.51 2.69
549 554 1.207329 CCCGGAGAGGTGAAGGTTTAG 59.793 57.143 0.73 0.00 38.74 1.85
550 555 1.203212 TCCCGGAGAGGTGAAGGTTTA 60.203 52.381 0.73 0.00 38.74 2.01
551 556 0.473117 TCCCGGAGAGGTGAAGGTTT 60.473 55.000 0.73 0.00 38.74 3.27
552 557 1.157751 TCCCGGAGAGGTGAAGGTT 59.842 57.895 0.73 0.00 38.74 3.50
553 558 1.609794 GTCCCGGAGAGGTGAAGGT 60.610 63.158 0.73 0.00 38.74 3.50
554 559 1.305381 AGTCCCGGAGAGGTGAAGG 60.305 63.158 0.73 0.00 38.74 3.46
555 560 1.324005 GGAGTCCCGGAGAGGTGAAG 61.324 65.000 0.73 0.00 38.74 3.02
556 561 1.305046 GGAGTCCCGGAGAGGTGAA 60.305 63.158 0.73 0.00 38.74 3.18
557 562 2.359404 GGAGTCCCGGAGAGGTGA 59.641 66.667 0.73 0.00 38.74 4.02
558 563 2.760385 GGGAGTCCCGGAGAGGTG 60.760 72.222 13.89 0.00 38.74 4.00
581 586 3.692370 AAACTGGATACCCGGCGCC 62.692 63.158 19.07 19.07 42.81 6.53
582 587 0.462403 TAAAACTGGATACCCGGCGC 60.462 55.000 0.00 0.00 42.81 6.53
583 588 2.140717 GATAAAACTGGATACCCGGCG 58.859 52.381 0.00 0.00 42.81 6.46
584 589 3.139077 CTGATAAAACTGGATACCCGGC 58.861 50.000 0.00 0.00 42.81 6.13
585 590 3.496160 CCCTGATAAAACTGGATACCCGG 60.496 52.174 0.00 0.00 44.64 5.73
586 591 3.135895 ACCCTGATAAAACTGGATACCCG 59.864 47.826 0.00 0.00 34.29 5.28
587 592 4.790718 ACCCTGATAAAACTGGATACCC 57.209 45.455 0.00 0.00 0.00 3.69
588 593 6.424032 AGAAACCCTGATAAAACTGGATACC 58.576 40.000 0.00 0.00 0.00 2.73
589 594 7.939784 AAGAAACCCTGATAAAACTGGATAC 57.060 36.000 0.00 0.00 0.00 2.24
590 595 8.950007 AAAAGAAACCCTGATAAAACTGGATA 57.050 30.769 0.00 0.00 0.00 2.59
591 596 7.855784 AAAAGAAACCCTGATAAAACTGGAT 57.144 32.000 0.00 0.00 0.00 3.41
592 597 8.221944 TCTAAAAGAAACCCTGATAAAACTGGA 58.778 33.333 0.00 0.00 0.00 3.86
593 598 8.404107 TCTAAAAGAAACCCTGATAAAACTGG 57.596 34.615 0.00 0.00 0.00 4.00
599 604 8.303876 GCACATTTCTAAAAGAAACCCTGATAA 58.696 33.333 4.32 0.00 45.83 1.75
600 605 7.450014 TGCACATTTCTAAAAGAAACCCTGATA 59.550 33.333 4.32 0.00 45.83 2.15
601 606 6.267471 TGCACATTTCTAAAAGAAACCCTGAT 59.733 34.615 4.32 0.00 45.83 2.90
602 607 5.596361 TGCACATTTCTAAAAGAAACCCTGA 59.404 36.000 4.32 0.00 45.83 3.86
603 608 5.841810 TGCACATTTCTAAAAGAAACCCTG 58.158 37.500 4.32 2.85 45.83 4.45
604 609 5.598417 ACTGCACATTTCTAAAAGAAACCCT 59.402 36.000 4.32 0.00 45.83 4.34
605 610 5.691754 CACTGCACATTTCTAAAAGAAACCC 59.308 40.000 4.32 0.00 45.83 4.11
606 611 6.503524 TCACTGCACATTTCTAAAAGAAACC 58.496 36.000 4.32 0.00 45.83 3.27
607 612 9.118236 GTATCACTGCACATTTCTAAAAGAAAC 57.882 33.333 4.32 0.00 45.83 2.78
608 613 8.845227 TGTATCACTGCACATTTCTAAAAGAAA 58.155 29.630 4.68 4.68 46.89 2.52
609 614 8.289618 GTGTATCACTGCACATTTCTAAAAGAA 58.710 33.333 0.00 0.00 37.85 2.52
610 615 7.443879 TGTGTATCACTGCACATTTCTAAAAGA 59.556 33.333 1.72 0.00 42.17 2.52
611 616 7.584108 TGTGTATCACTGCACATTTCTAAAAG 58.416 34.615 1.72 0.00 42.17 2.27
612 617 7.503521 TGTGTATCACTGCACATTTCTAAAA 57.496 32.000 1.72 0.00 42.17 1.52
613 618 7.503521 TTGTGTATCACTGCACATTTCTAAA 57.496 32.000 0.00 0.00 45.61 1.85
614 619 7.686438 ATTGTGTATCACTGCACATTTCTAA 57.314 32.000 0.00 0.00 45.61 2.10
615 620 7.686438 AATTGTGTATCACTGCACATTTCTA 57.314 32.000 0.00 0.00 45.61 2.10
616 621 6.579666 AATTGTGTATCACTGCACATTTCT 57.420 33.333 0.00 0.00 45.61 2.52
617 622 6.862608 TGAAATTGTGTATCACTGCACATTTC 59.137 34.615 16.26 16.26 45.61 2.17
618 623 6.642131 GTGAAATTGTGTATCACTGCACATTT 59.358 34.615 0.00 0.00 45.61 2.32
619 624 6.151691 GTGAAATTGTGTATCACTGCACATT 58.848 36.000 0.00 0.00 45.61 2.71
620 625 5.702865 GTGAAATTGTGTATCACTGCACAT 58.297 37.500 0.00 0.00 45.61 3.21
621 626 5.107109 GTGAAATTGTGTATCACTGCACA 57.893 39.130 0.85 0.00 44.82 4.57
627 632 5.220416 GCGGTAGAGTGAAATTGTGTATCAC 60.220 44.000 0.00 0.00 42.91 3.06
628 633 4.868171 GCGGTAGAGTGAAATTGTGTATCA 59.132 41.667 0.00 0.00 0.00 2.15
629 634 4.270325 GGCGGTAGAGTGAAATTGTGTATC 59.730 45.833 0.00 0.00 0.00 2.24
630 635 4.189231 GGCGGTAGAGTGAAATTGTGTAT 58.811 43.478 0.00 0.00 0.00 2.29
631 636 3.592059 GGCGGTAGAGTGAAATTGTGTA 58.408 45.455 0.00 0.00 0.00 2.90
632 637 2.423577 GGCGGTAGAGTGAAATTGTGT 58.576 47.619 0.00 0.00 0.00 3.72
633 638 1.393539 CGGCGGTAGAGTGAAATTGTG 59.606 52.381 0.00 0.00 0.00 3.33
634 639 1.674817 CCGGCGGTAGAGTGAAATTGT 60.675 52.381 19.97 0.00 0.00 2.71
635 640 1.006832 CCGGCGGTAGAGTGAAATTG 58.993 55.000 19.97 0.00 0.00 2.32
636 641 0.899720 TCCGGCGGTAGAGTGAAATT 59.100 50.000 27.32 0.00 0.00 1.82
637 642 0.460311 CTCCGGCGGTAGAGTGAAAT 59.540 55.000 27.32 0.00 0.00 2.17
638 643 0.896940 ACTCCGGCGGTAGAGTGAAA 60.897 55.000 27.32 1.28 41.74 2.69
639 644 1.303888 ACTCCGGCGGTAGAGTGAA 60.304 57.895 27.32 2.13 41.74 3.18
640 645 1.748122 GACTCCGGCGGTAGAGTGA 60.748 63.158 27.32 2.99 43.32 3.41
641 646 2.799371 GACTCCGGCGGTAGAGTG 59.201 66.667 27.32 12.22 43.32 3.51
642 647 2.823147 CGACTCCGGCGGTAGAGT 60.823 66.667 27.32 22.01 45.90 3.24
652 657 4.477975 GACGTGCCTCCGACTCCG 62.478 72.222 0.00 0.00 0.00 4.63
653 658 4.477975 CGACGTGCCTCCGACTCC 62.478 72.222 0.00 0.00 0.00 3.85
671 676 4.394078 TCAACGTCGGCTCGTCGG 62.394 66.667 15.42 6.91 43.38 4.79
672 677 3.164011 GTCAACGTCGGCTCGTCG 61.164 66.667 11.17 11.17 43.38 5.12
673 678 3.164011 CGTCAACGTCGGCTCGTC 61.164 66.667 0.00 0.00 43.38 4.20
676 681 3.764049 GTGCGTCAACGTCGGCTC 61.764 66.667 4.29 0.00 42.22 4.70
679 684 3.103911 GAGGTGCGTCAACGTCGG 61.104 66.667 4.29 0.00 42.22 4.79
680 685 3.103911 GGAGGTGCGTCAACGTCG 61.104 66.667 4.29 0.00 42.22 5.12
681 686 2.737376 GGGAGGTGCGTCAACGTC 60.737 66.667 4.29 0.00 42.22 4.34
682 687 3.542676 TGGGAGGTGCGTCAACGT 61.543 61.111 4.29 0.00 42.22 3.99
683 688 3.041940 GTGGGAGGTGCGTCAACG 61.042 66.667 0.00 0.00 43.27 4.10
684 689 2.668550 GGTGGGAGGTGCGTCAAC 60.669 66.667 0.00 0.00 0.00 3.18
685 690 2.847234 AGGTGGGAGGTGCGTCAA 60.847 61.111 0.00 0.00 0.00 3.18
686 691 3.311110 GAGGTGGGAGGTGCGTCA 61.311 66.667 0.00 0.00 0.00 4.35
687 692 2.997897 AGAGGTGGGAGGTGCGTC 60.998 66.667 0.00 0.00 0.00 5.19
688 693 3.314331 CAGAGGTGGGAGGTGCGT 61.314 66.667 0.00 0.00 0.00 5.24
689 694 4.767255 GCAGAGGTGGGAGGTGCG 62.767 72.222 0.00 0.00 0.00 5.34
690 695 4.767255 CGCAGAGGTGGGAGGTGC 62.767 72.222 0.00 0.00 38.96 5.01
691 696 4.087892 CCGCAGAGGTGGGAGGTG 62.088 72.222 0.00 0.00 41.16 4.00
798 803 1.488705 TTGGACTAGTGGTGGGCTGG 61.489 60.000 0.00 0.00 0.00 4.85
835 840 1.444119 GGTGCTGTGCTCGGAAACAA 61.444 55.000 0.00 0.00 0.00 2.83
836 841 1.891919 GGTGCTGTGCTCGGAAACA 60.892 57.895 0.00 0.00 0.00 2.83
837 842 2.946762 GGTGCTGTGCTCGGAAAC 59.053 61.111 0.00 0.00 0.00 2.78
838 843 2.664851 CGGTGCTGTGCTCGGAAA 60.665 61.111 0.00 0.00 0.00 3.13
878 883 0.110147 ATCGATCGAGATTCCGTCGC 60.110 55.000 23.84 0.00 37.35 5.19
903 908 3.876589 TTCAGCGGCCGAACCAGTC 62.877 63.158 33.48 9.31 39.03 3.51
904 909 3.936203 TTCAGCGGCCGAACCAGT 61.936 61.111 33.48 1.42 39.03 4.00
906 911 3.876589 GAGTTCAGCGGCCGAACCA 62.877 63.158 33.48 6.34 43.07 3.67
907 912 3.119096 GAGTTCAGCGGCCGAACC 61.119 66.667 33.48 12.00 43.07 3.62
908 913 1.959226 TTGAGTTCAGCGGCCGAAC 60.959 57.895 33.48 24.31 42.52 3.95
910 915 2.357034 GTTGAGTTCAGCGGCCGA 60.357 61.111 33.48 4.65 0.00 5.54
911 916 2.357517 AGTTGAGTTCAGCGGCCG 60.358 61.111 24.05 24.05 32.04 6.13
912 917 2.383527 CGAGTTGAGTTCAGCGGCC 61.384 63.158 0.00 0.00 32.04 6.13
913 918 1.618640 GACGAGTTGAGTTCAGCGGC 61.619 60.000 0.00 0.00 32.04 6.53
914 919 0.039074 AGACGAGTTGAGTTCAGCGG 60.039 55.000 0.00 0.00 32.04 5.52
915 920 1.332178 GAGACGAGTTGAGTTCAGCG 58.668 55.000 0.00 0.00 32.04 5.18
916 921 1.000163 TGGAGACGAGTTGAGTTCAGC 60.000 52.381 0.00 0.00 0.00 4.26
917 922 3.371102 TTGGAGACGAGTTGAGTTCAG 57.629 47.619 0.00 0.00 0.00 3.02
918 923 3.812156 TTTGGAGACGAGTTGAGTTCA 57.188 42.857 0.00 0.00 0.00 3.18
919 924 5.710984 TCTATTTGGAGACGAGTTGAGTTC 58.289 41.667 0.00 0.00 0.00 3.01
920 925 5.715070 CTCTATTTGGAGACGAGTTGAGTT 58.285 41.667 0.00 0.00 35.52 3.01
921 926 4.381079 GCTCTATTTGGAGACGAGTTGAGT 60.381 45.833 0.00 0.00 36.28 3.41
922 927 4.109050 GCTCTATTTGGAGACGAGTTGAG 58.891 47.826 0.00 0.00 36.73 3.02
923 928 3.119101 GGCTCTATTTGGAGACGAGTTGA 60.119 47.826 0.00 0.00 35.52 3.18
924 929 3.190874 GGCTCTATTTGGAGACGAGTTG 58.809 50.000 0.00 0.00 35.52 3.16
925 930 2.832129 TGGCTCTATTTGGAGACGAGTT 59.168 45.455 0.00 0.00 43.89 3.01
926 931 2.428890 CTGGCTCTATTTGGAGACGAGT 59.571 50.000 0.00 0.00 43.89 4.18
927 932 2.223923 CCTGGCTCTATTTGGAGACGAG 60.224 54.545 0.00 0.00 43.89 4.18
928 933 1.757118 CCTGGCTCTATTTGGAGACGA 59.243 52.381 0.00 0.00 43.89 4.20
1089 1098 1.511305 GGGAAGAGCGTCGACATCA 59.489 57.895 17.16 0.00 0.00 3.07
1092 1101 2.670592 TCGGGAAGAGCGTCGACA 60.671 61.111 17.16 0.00 0.00 4.35
1157 1169 3.406764 GAGGTCAAGTCTGTTGAGCATT 58.593 45.455 16.73 0.18 46.12 3.56
1212 1228 4.697352 GTCCTAAATCTTGCACAGTGACAT 59.303 41.667 4.15 0.00 0.00 3.06
1219 1235 4.350368 TCACAGTCCTAAATCTTGCACA 57.650 40.909 0.00 0.00 0.00 4.57
1220 1236 5.886960 ATTCACAGTCCTAAATCTTGCAC 57.113 39.130 0.00 0.00 0.00 4.57
1238 1254 3.625853 TCCATGGGTTATCGCAAATTCA 58.374 40.909 13.02 0.00 39.80 2.57
1289 1305 0.331954 AGACTCCTTCGAGGGCTACA 59.668 55.000 9.09 0.00 40.77 2.74
1307 1323 2.219674 GCTTCCTGCACGAATTCGATAG 59.780 50.000 33.05 23.74 43.39 2.08
1310 1326 1.019278 GGCTTCCTGCACGAATTCGA 61.019 55.000 33.05 11.11 45.15 3.71
1396 1420 3.969287 TCCAGAAGGAGACATTCAGTG 57.031 47.619 0.00 0.00 39.61 3.66
1406 1434 3.517100 TCCTCAATCTGTTCCAGAAGGAG 59.483 47.826 8.43 11.46 46.74 3.69
1421 1449 1.203523 GTCGTCACTGCTCTCCTCAAT 59.796 52.381 0.00 0.00 0.00 2.57
1458 1486 3.244215 CGAGGTATCATGCCCTACAACAT 60.244 47.826 0.00 0.00 0.00 2.71
1464 1492 2.984435 TACCGAGGTATCATGCCCTA 57.016 50.000 0.00 0.00 0.00 3.53
1467 1495 3.470645 AACTTACCGAGGTATCATGCC 57.529 47.619 2.46 0.00 0.00 4.40
1505 1533 8.544622 TGGTAACAGAAACATATGATACTGGAA 58.455 33.333 10.38 5.33 46.17 3.53
1590 1620 9.817809 TGAAACTGCTACACTTTTATAGGATAG 57.182 33.333 0.00 0.00 0.00 2.08
1600 1630 7.275888 TGATTTGATGAAACTGCTACACTTT 57.724 32.000 0.00 0.00 0.00 2.66
1603 1633 9.624697 TTTAATGATTTGATGAAACTGCTACAC 57.375 29.630 0.00 0.00 0.00 2.90
1607 1637 9.525409 GCTATTTAATGATTTGATGAAACTGCT 57.475 29.630 0.00 0.00 0.00 4.24
1608 1638 8.758715 GGCTATTTAATGATTTGATGAAACTGC 58.241 33.333 0.00 0.00 0.00 4.40
1611 1641 7.357532 CGCGGCTATTTAATGATTTGATGAAAC 60.358 37.037 0.00 0.00 0.00 2.78
1612 1642 6.636447 CGCGGCTATTTAATGATTTGATGAAA 59.364 34.615 0.00 0.00 0.00 2.69
1613 1643 6.142139 CGCGGCTATTTAATGATTTGATGAA 58.858 36.000 0.00 0.00 0.00 2.57
1614 1644 5.238432 ACGCGGCTATTTAATGATTTGATGA 59.762 36.000 12.47 0.00 0.00 2.92
1615 1645 5.451908 ACGCGGCTATTTAATGATTTGATG 58.548 37.500 12.47 0.00 0.00 3.07
1616 1646 5.689383 ACGCGGCTATTTAATGATTTGAT 57.311 34.783 12.47 0.00 0.00 2.57
1620 1650 7.197071 TGATTTACGCGGCTATTTAATGATT 57.803 32.000 12.47 0.00 0.00 2.57
1621 1651 6.620733 GCTGATTTACGCGGCTATTTAATGAT 60.621 38.462 12.47 0.00 34.83 2.45
1622 1652 5.333798 GCTGATTTACGCGGCTATTTAATGA 60.334 40.000 12.47 0.00 34.83 2.57
1623 1653 4.846137 GCTGATTTACGCGGCTATTTAATG 59.154 41.667 12.47 0.00 34.83 1.90
1624 1654 4.513692 TGCTGATTTACGCGGCTATTTAAT 59.486 37.500 12.47 0.00 38.45 1.40
1625 1655 3.872182 TGCTGATTTACGCGGCTATTTAA 59.128 39.130 12.47 0.00 38.45 1.52
1626 1656 3.459145 TGCTGATTTACGCGGCTATTTA 58.541 40.909 12.47 0.00 38.45 1.40
1636 1666 6.585702 TGGTCAATTCAAATTGCTGATTTACG 59.414 34.615 10.02 0.00 44.15 3.18
1641 1672 6.407299 GGGTATGGTCAATTCAAATTGCTGAT 60.407 38.462 10.02 5.00 44.15 2.90
1644 1675 4.162131 GGGGTATGGTCAATTCAAATTGCT 59.838 41.667 10.02 0.00 44.15 3.91
1659 1690 1.759445 CACTGAGTCTCTGGGGTATGG 59.241 57.143 11.06 0.00 0.00 2.74
1663 1694 0.485099 AGTCACTGAGTCTCTGGGGT 59.515 55.000 8.94 0.00 0.00 4.95
1734 1766 3.634910 TCGTGCATCACTATAGGTTGCTA 59.365 43.478 18.60 7.89 34.00 3.49
1754 1786 5.059404 ACTAAATTTGGAACTTGGCATCG 57.941 39.130 8.72 0.00 0.00 3.84
1815 1847 4.023707 GCCAATGTGATCCTTTCTATTCCG 60.024 45.833 0.00 0.00 0.00 4.30
1833 1865 2.936202 AGTAAATGATGCGAGGCCAAT 58.064 42.857 5.01 0.00 0.00 3.16
1883 1944 1.679944 GCAGTTATCTCAGCCCTTGCA 60.680 52.381 0.00 0.00 41.13 4.08
1952 2015 8.015658 GCTGGCGTATATTTAAATTAGGAACTG 58.984 37.037 5.91 6.78 41.52 3.16
1965 2992 5.072741 AGAAATCATGGCTGGCGTATATTT 58.927 37.500 12.67 12.67 0.00 1.40
1996 3023 0.463620 CCTAGAGCTCTGAACCTGCC 59.536 60.000 26.78 0.00 0.00 4.85
2143 3172 4.455877 AGACGTTGGCTATCAAAAAGGAAG 59.544 41.667 0.00 0.00 37.08 3.46
2163 3193 2.808543 CACCTAAGGACAAGTTGCAGAC 59.191 50.000 1.81 0.00 0.00 3.51
2350 3380 9.950680 TTTTTAATGAGTCTAAGCTTTCAACTG 57.049 29.630 3.20 0.00 0.00 3.16
2370 3400 7.169645 GTGCAAGAACAGCTCAATCATTTTTAA 59.830 33.333 0.00 0.00 0.00 1.52
2380 3410 1.141657 AGGAGTGCAAGAACAGCTCAA 59.858 47.619 0.00 0.00 0.00 3.02
2386 3416 2.325484 TCCTGTAGGAGTGCAAGAACA 58.675 47.619 0.00 0.00 39.78 3.18
2825 3860 5.566469 ACAAATCTGGGAAACGAAAGGATA 58.434 37.500 0.00 0.00 0.00 2.59
2906 3941 3.690139 CAGCAGCCCATCATATCTTCATC 59.310 47.826 0.00 0.00 0.00 2.92
2912 3947 2.026542 TCCATCAGCAGCCCATCATATC 60.027 50.000 0.00 0.00 0.00 1.63
3073 5569 3.386402 TCCAAGGTTTTGAATGGGTTGAC 59.614 43.478 0.00 0.00 36.36 3.18
3101 5598 0.039618 TGGGTTTCATCCAGGCCTTC 59.960 55.000 0.00 0.00 0.00 3.46
3107 5604 4.158394 ACGATTCAAATGGGTTTCATCCAG 59.842 41.667 0.00 0.00 37.75 3.86
3165 5662 0.731417 GCCTGACGCTTCTACGAGTA 59.269 55.000 0.00 0.00 36.70 2.59
3166 5663 1.507174 GCCTGACGCTTCTACGAGT 59.493 57.895 0.00 0.00 36.70 4.18
3167 5664 4.386245 GCCTGACGCTTCTACGAG 57.614 61.111 0.00 0.00 36.70 4.18
3261 5761 6.236409 AGGATATCATAATGGAGCACAAGTG 58.764 40.000 4.83 0.00 0.00 3.16
3332 5832 0.690762 TCAGGTTGACCTACTTGGCC 59.309 55.000 1.66 0.00 46.65 5.36
3333 5833 2.561478 TTCAGGTTGACCTACTTGGC 57.439 50.000 1.66 0.00 46.65 4.52
3334 5834 6.659242 ACATAATTTCAGGTTGACCTACTTGG 59.341 38.462 1.66 0.00 46.65 3.61
3335 5835 7.362056 CCACATAATTTCAGGTTGACCTACTTG 60.362 40.741 1.66 0.00 46.65 3.16
3375 5882 5.531287 TCATCAAATCCATTCTCAGATGCTG 59.469 40.000 0.00 0.00 33.34 4.41
3390 5897 5.449812 ACTGCACGATGGAGTCATCAAATC 61.450 45.833 6.39 0.00 46.32 2.17
3400 5907 1.667724 GAATGGAACTGCACGATGGAG 59.332 52.381 0.00 0.00 41.93 3.86
3407 5914 5.163652 GGTTAATGTAGGAATGGAACTGCAC 60.164 44.000 0.00 0.00 32.26 4.57
3410 5917 6.432783 TGTTGGTTAATGTAGGAATGGAACTG 59.567 38.462 0.00 0.00 0.00 3.16
3411 5918 6.548321 TGTTGGTTAATGTAGGAATGGAACT 58.452 36.000 0.00 0.00 0.00 3.01
3412 5919 6.827586 TGTTGGTTAATGTAGGAATGGAAC 57.172 37.500 0.00 0.00 0.00 3.62
3413 5920 6.379703 CCATGTTGGTTAATGTAGGAATGGAA 59.620 38.462 0.00 0.00 34.12 3.53
3415 5922 6.147864 CCATGTTGGTTAATGTAGGAATGG 57.852 41.667 0.00 0.00 31.35 3.16
3430 5937 0.537188 AGCCTCGTAGACCATGTTGG 59.463 55.000 0.00 0.00 45.02 3.77
3431 5938 2.223829 CCTAGCCTCGTAGACCATGTTG 60.224 54.545 0.00 0.00 0.00 3.33
3432 5939 2.032620 CCTAGCCTCGTAGACCATGTT 58.967 52.381 0.00 0.00 0.00 2.71
3433 5940 1.214673 TCCTAGCCTCGTAGACCATGT 59.785 52.381 0.00 0.00 0.00 3.21
3434 5941 1.883275 CTCCTAGCCTCGTAGACCATG 59.117 57.143 0.00 0.00 0.00 3.66
3435 5942 1.775459 TCTCCTAGCCTCGTAGACCAT 59.225 52.381 0.00 0.00 0.00 3.55
3436 5943 1.210538 TCTCCTAGCCTCGTAGACCA 58.789 55.000 0.00 0.00 0.00 4.02
3437 5944 2.345124 TTCTCCTAGCCTCGTAGACC 57.655 55.000 0.00 0.00 0.00 3.85
3438 5945 3.015327 TGTTTCTCCTAGCCTCGTAGAC 58.985 50.000 0.00 0.00 0.00 2.59
3439 5946 3.054582 TCTGTTTCTCCTAGCCTCGTAGA 60.055 47.826 0.00 0.00 0.00 2.59
3440 5947 3.065648 GTCTGTTTCTCCTAGCCTCGTAG 59.934 52.174 0.00 0.00 0.00 3.51
3441 5948 3.015327 GTCTGTTTCTCCTAGCCTCGTA 58.985 50.000 0.00 0.00 0.00 3.43
3442 5949 1.819903 GTCTGTTTCTCCTAGCCTCGT 59.180 52.381 0.00 0.00 0.00 4.18
3443 5950 1.819288 TGTCTGTTTCTCCTAGCCTCG 59.181 52.381 0.00 0.00 0.00 4.63
3444 5951 3.431486 CCATGTCTGTTTCTCCTAGCCTC 60.431 52.174 0.00 0.00 0.00 4.70
3445 5952 2.503356 CCATGTCTGTTTCTCCTAGCCT 59.497 50.000 0.00 0.00 0.00 4.58
3446 5953 2.237392 ACCATGTCTGTTTCTCCTAGCC 59.763 50.000 0.00 0.00 0.00 3.93
3447 5954 3.055819 TCACCATGTCTGTTTCTCCTAGC 60.056 47.826 0.00 0.00 0.00 3.42
3448 5955 4.021104 TGTCACCATGTCTGTTTCTCCTAG 60.021 45.833 0.00 0.00 0.00 3.02
3449 5956 3.901222 TGTCACCATGTCTGTTTCTCCTA 59.099 43.478 0.00 0.00 0.00 2.94
3450 5957 2.705658 TGTCACCATGTCTGTTTCTCCT 59.294 45.455 0.00 0.00 0.00 3.69
3451 5958 3.126001 TGTCACCATGTCTGTTTCTCC 57.874 47.619 0.00 0.00 0.00 3.71
3452 5959 4.130118 AGTTGTCACCATGTCTGTTTCTC 58.870 43.478 0.00 0.00 0.00 2.87
3453 5960 4.156455 AGTTGTCACCATGTCTGTTTCT 57.844 40.909 0.00 0.00 0.00 2.52
3454 5961 4.498009 CCAAGTTGTCACCATGTCTGTTTC 60.498 45.833 1.45 0.00 0.00 2.78
3455 5962 3.381272 CCAAGTTGTCACCATGTCTGTTT 59.619 43.478 1.45 0.00 0.00 2.83
3456 5963 2.951642 CCAAGTTGTCACCATGTCTGTT 59.048 45.455 1.45 0.00 0.00 3.16
3457 5964 2.172505 TCCAAGTTGTCACCATGTCTGT 59.827 45.455 1.45 0.00 0.00 3.41
3458 5965 2.549754 GTCCAAGTTGTCACCATGTCTG 59.450 50.000 1.45 0.00 0.00 3.51
3459 5966 2.439507 AGTCCAAGTTGTCACCATGTCT 59.560 45.455 1.45 0.00 0.00 3.41
3460 5967 2.851195 AGTCCAAGTTGTCACCATGTC 58.149 47.619 1.45 0.00 0.00 3.06
3461 5968 3.807209 GCTAGTCCAAGTTGTCACCATGT 60.807 47.826 1.45 0.00 0.00 3.21
3462 5969 2.744202 GCTAGTCCAAGTTGTCACCATG 59.256 50.000 1.45 0.00 0.00 3.66
3463 5970 2.612972 CGCTAGTCCAAGTTGTCACCAT 60.613 50.000 1.45 0.00 0.00 3.55
3464 5971 1.270094 CGCTAGTCCAAGTTGTCACCA 60.270 52.381 1.45 0.00 0.00 4.17
3465 5972 1.000506 TCGCTAGTCCAAGTTGTCACC 59.999 52.381 1.45 0.00 0.00 4.02
3466 5973 2.030185 TCTCGCTAGTCCAAGTTGTCAC 60.030 50.000 1.45 0.00 0.00 3.67
3467 5974 2.235891 TCTCGCTAGTCCAAGTTGTCA 58.764 47.619 1.45 0.00 0.00 3.58
3468 5975 3.246619 CTTCTCGCTAGTCCAAGTTGTC 58.753 50.000 1.45 0.00 0.00 3.18
3469 5976 2.610727 GCTTCTCGCTAGTCCAAGTTGT 60.611 50.000 1.45 0.00 35.14 3.32
3470 5977 1.996191 GCTTCTCGCTAGTCCAAGTTG 59.004 52.381 0.00 0.00 35.14 3.16
3471 5978 1.402984 CGCTTCTCGCTAGTCCAAGTT 60.403 52.381 0.00 0.00 36.13 2.66
3472 5979 0.171455 CGCTTCTCGCTAGTCCAAGT 59.829 55.000 0.00 0.00 36.13 3.16
3473 5980 0.526524 CCGCTTCTCGCTAGTCCAAG 60.527 60.000 0.00 0.00 36.73 3.61
3474 5981 1.511305 CCGCTTCTCGCTAGTCCAA 59.489 57.895 0.00 0.00 36.73 3.53
3475 5982 3.064987 GCCGCTTCTCGCTAGTCCA 62.065 63.158 0.00 0.00 36.73 4.02
3476 5983 2.278923 GCCGCTTCTCGCTAGTCC 60.279 66.667 0.00 0.00 36.73 3.85
3477 5984 2.652496 CGCCGCTTCTCGCTAGTC 60.652 66.667 0.00 0.00 36.73 2.59
3478 5985 4.194720 CCGCCGCTTCTCGCTAGT 62.195 66.667 0.00 0.00 36.73 2.57
3479 5986 4.933064 CCCGCCGCTTCTCGCTAG 62.933 72.222 0.00 0.00 36.73 3.42
3493 6000 3.141488 CTGTCTCCCTCGTCCCCG 61.141 72.222 0.00 0.00 0.00 5.73
3494 6001 2.760385 CCTGTCTCCCTCGTCCCC 60.760 72.222 0.00 0.00 0.00 4.81
3495 6002 2.760385 CCCTGTCTCCCTCGTCCC 60.760 72.222 0.00 0.00 0.00 4.46
3496 6003 2.760385 CCCCTGTCTCCCTCGTCC 60.760 72.222 0.00 0.00 0.00 4.79
3497 6004 1.755008 CTCCCCTGTCTCCCTCGTC 60.755 68.421 0.00 0.00 0.00 4.20
3498 6005 2.360980 CTCCCCTGTCTCCCTCGT 59.639 66.667 0.00 0.00 0.00 4.18
3499 6006 2.443016 CCTCCCCTGTCTCCCTCG 60.443 72.222 0.00 0.00 0.00 4.63
3500 6007 1.075600 CTCCTCCCCTGTCTCCCTC 60.076 68.421 0.00 0.00 0.00 4.30
3501 6008 3.114390 CTCCTCCCCTGTCTCCCT 58.886 66.667 0.00 0.00 0.00 4.20
3502 6009 2.766229 GCTCCTCCCCTGTCTCCC 60.766 72.222 0.00 0.00 0.00 4.30
3503 6010 2.766229 GGCTCCTCCCCTGTCTCC 60.766 72.222 0.00 0.00 0.00 3.71
3504 6011 2.039624 TGGCTCCTCCCCTGTCTC 59.960 66.667 0.00 0.00 0.00 3.36
3505 6012 2.284995 GTGGCTCCTCCCCTGTCT 60.285 66.667 0.00 0.00 0.00 3.41
3506 6013 3.403558 GGTGGCTCCTCCCCTGTC 61.404 72.222 0.00 0.00 0.00 3.51
3514 6021 4.423209 GGAGGGAGGGTGGCTCCT 62.423 72.222 5.46 2.46 40.67 3.69
3516 6023 4.779733 TCGGAGGGAGGGTGGCTC 62.780 72.222 0.00 0.00 0.00 4.70
3517 6024 4.787280 CTCGGAGGGAGGGTGGCT 62.787 72.222 0.00 0.00 39.22 4.75
3531 6038 2.027605 ACATCATACCGGCGCTCG 59.972 61.111 7.64 9.53 38.88 5.03
3532 6039 1.956170 CCACATCATACCGGCGCTC 60.956 63.158 7.64 0.00 0.00 5.03
3533 6040 2.108976 CCACATCATACCGGCGCT 59.891 61.111 7.64 0.00 0.00 5.92
3534 6041 2.972505 CCCACATCATACCGGCGC 60.973 66.667 0.00 0.00 0.00 6.53
3535 6042 1.887242 CACCCACATCATACCGGCG 60.887 63.158 0.00 0.00 0.00 6.46
3536 6043 1.525995 CCACCCACATCATACCGGC 60.526 63.158 0.00 0.00 0.00 6.13
3537 6044 1.148273 CCCACCCACATCATACCGG 59.852 63.158 0.00 0.00 0.00 5.28
3538 6045 0.463654 CACCCACCCACATCATACCG 60.464 60.000 0.00 0.00 0.00 4.02
3539 6046 0.916086 TCACCCACCCACATCATACC 59.084 55.000 0.00 0.00 0.00 2.73
3540 6047 1.408266 GGTCACCCACCCACATCATAC 60.408 57.143 0.00 0.00 39.69 2.39
3541 6048 0.916086 GGTCACCCACCCACATCATA 59.084 55.000 0.00 0.00 39.69 2.15
3542 6049 1.691219 GGTCACCCACCCACATCAT 59.309 57.895 0.00 0.00 39.69 2.45
3543 6050 2.889606 CGGTCACCCACCCACATCA 61.890 63.158 0.00 0.00 43.31 3.07
3544 6051 2.046314 CGGTCACCCACCCACATC 60.046 66.667 0.00 0.00 43.31 3.06
3545 6052 3.646715 CCGGTCACCCACCCACAT 61.647 66.667 0.00 0.00 43.31 3.21
3547 6054 4.636435 CACCGGTCACCCACCCAC 62.636 72.222 2.59 0.00 43.31 4.61
3558 6065 1.152839 CCAAAACCAGACCACCGGT 60.153 57.895 0.00 0.00 39.44 5.28
3559 6066 1.901464 CCCAAAACCAGACCACCGG 60.901 63.158 0.00 0.00 0.00 5.28
3560 6067 2.561037 GCCCAAAACCAGACCACCG 61.561 63.158 0.00 0.00 0.00 4.94
3561 6068 2.207229 GGCCCAAAACCAGACCACC 61.207 63.158 0.00 0.00 0.00 4.61
3562 6069 2.561037 CGGCCCAAAACCAGACCAC 61.561 63.158 0.00 0.00 0.00 4.16
3563 6070 2.203422 CGGCCCAAAACCAGACCA 60.203 61.111 0.00 0.00 0.00 4.02
3564 6071 3.680786 GCGGCCCAAAACCAGACC 61.681 66.667 0.00 0.00 0.00 3.85
3565 6072 4.038080 CGCGGCCCAAAACCAGAC 62.038 66.667 0.00 0.00 0.00 3.51
3570 6077 3.607661 TTTCCCGCGGCCCAAAAC 61.608 61.111 22.85 0.00 0.00 2.43
3571 6078 3.607661 GTTTCCCGCGGCCCAAAA 61.608 61.111 22.85 13.96 0.00 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.