Multiple sequence alignment - TraesCS2D01G350900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G350900 chr2D 100.000 3943 0 0 1 3943 449072710 449068768 0.000000e+00 7282.0
1 TraesCS2D01G350900 chr2D 84.971 173 21 5 3625 3796 349002077 349001909 1.880000e-38 171.0
2 TraesCS2D01G350900 chr2D 95.000 40 0 2 1883 1920 608027320 608027281 1.180000e-05 62.1
3 TraesCS2D01G350900 chr2B 91.658 1882 99 21 1 1864 529254774 529256615 0.000000e+00 2553.0
4 TraesCS2D01G350900 chr2B 93.865 1467 54 20 1959 3414 529256640 529258081 0.000000e+00 2178.0
5 TraesCS2D01G350900 chr2A 96.176 1412 40 11 1985 3389 593649274 593650678 0.000000e+00 2296.0
6 TraesCS2D01G350900 chr2A 92.170 1507 77 18 374 1864 593647755 593649236 0.000000e+00 2091.0
7 TraesCS2D01G350900 chr2A 90.030 331 28 2 1 327 593647418 593647747 1.310000e-114 424.0
8 TraesCS2D01G350900 chr2A 100.000 28 0 0 3372 3399 657059356 657059329 7.000000e-03 52.8
9 TraesCS2D01G350900 chr3D 87.019 701 43 22 915 1573 391258506 391259200 0.000000e+00 747.0
10 TraesCS2D01G350900 chr3D 94.444 54 3 0 1906 1959 269948203 269948150 2.520000e-12 84.2
11 TraesCS2D01G350900 chr3D 84.043 94 6 7 3 92 3291926 3292014 9.080000e-12 82.4
12 TraesCS2D01G350900 chr3D 97.368 38 1 0 1922 1959 269945814 269945851 9.150000e-07 65.8
13 TraesCS2D01G350900 chr3D 83.333 72 7 4 1891 1962 2692216 2692150 1.180000e-05 62.1
14 TraesCS2D01G350900 chr1B 85.222 203 27 3 3595 3796 666555045 666555245 5.160000e-49 206.0
15 TraesCS2D01G350900 chr1B 83.251 203 31 3 3595 3796 525800549 525800749 2.420000e-42 183.0
16 TraesCS2D01G350900 chr1B 83.770 191 26 5 3598 3785 640600883 640601071 4.050000e-40 176.0
17 TraesCS2D01G350900 chr1B 90.196 51 1 3 1872 1920 51601916 51601868 3.290000e-06 63.9
18 TraesCS2D01G350900 chr5B 85.864 191 22 3 3599 3786 563548108 563548296 8.640000e-47 198.0
19 TraesCS2D01G350900 chr5B 90.278 72 5 1 1890 1959 661232214 661232285 4.200000e-15 93.5
20 TraesCS2D01G350900 chr5B 94.595 37 2 0 1884 1920 660148665 660148629 1.530000e-04 58.4
21 TraesCS2D01G350900 chr6A 83.251 203 31 3 3595 3796 461429356 461429556 2.420000e-42 183.0
22 TraesCS2D01G350900 chr5A 86.127 173 21 3 3625 3796 526587768 526587598 2.420000e-42 183.0
23 TraesCS2D01G350900 chr5A 81.818 209 34 4 3594 3801 651858264 651858059 5.240000e-39 172.0
24 TraesCS2D01G350900 chr5A 88.158 76 5 2 1891 1962 676888980 676888905 1.950000e-13 87.9
25 TraesCS2D01G350900 chr3A 84.066 182 27 2 3597 3777 401016004 401015824 1.460000e-39 174.0
26 TraesCS2D01G350900 chr3A 97.059 34 1 0 1883 1916 676242987 676242954 1.530000e-04 58.4
27 TraesCS2D01G350900 chrUn 80.838 167 31 1 556 721 297957767 297957601 3.200000e-26 130.0
28 TraesCS2D01G350900 chr6B 81.366 161 29 1 556 715 32846271 32846431 3.200000e-26 130.0
29 TraesCS2D01G350900 chr6B 81.366 161 29 1 556 715 32900439 32900599 3.200000e-26 130.0
30 TraesCS2D01G350900 chr6B 100.000 29 0 0 3889 3917 212166825 212166797 2.000000e-03 54.7
31 TraesCS2D01G350900 chr7D 84.524 84 9 2 1 84 363549009 363548930 3.270000e-11 80.5
32 TraesCS2D01G350900 chr7B 85.526 76 8 1 3 78 523167637 523167565 4.230000e-10 76.8
33 TraesCS2D01G350900 chr4D 82.353 85 10 4 1 85 136190698 136190619 7.070000e-08 69.4
34 TraesCS2D01G350900 chr1A 97.222 36 1 0 1885 1920 296939079 296939114 1.180000e-05 62.1
35 TraesCS2D01G350900 chr1A 87.755 49 4 2 1872 1920 583127226 583127272 5.500000e-04 56.5
36 TraesCS2D01G350900 chr7A 96.875 32 0 1 1861 1891 433736463 433736494 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G350900 chr2D 449068768 449072710 3942 True 7282.000000 7282 100.0000 1 3943 1 chr2D.!!$R2 3942
1 TraesCS2D01G350900 chr2B 529254774 529258081 3307 False 2365.500000 2553 92.7615 1 3414 2 chr2B.!!$F1 3413
2 TraesCS2D01G350900 chr2A 593647418 593650678 3260 False 1603.666667 2296 92.7920 1 3389 3 chr2A.!!$F1 3388
3 TraesCS2D01G350900 chr3D 391258506 391259200 694 False 747.000000 747 87.0190 915 1573 1 chr3D.!!$F3 658

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
944 970 0.396417 AGGGATCTCCACTCCACTCG 60.396 60.000 0.00 0.0 38.24 4.18 F
1615 1691 1.133025 GTGGGATGGCGATTCACTTTG 59.867 52.381 8.23 0.0 0.00 2.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1890 1967 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.0 0.0 0.0 0.00 2.59 R
3598 3691 0.465642 CCCCTTAACCGAATGAGGCC 60.466 60.0 0.0 0.0 33.69 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 4.760530 TCATAGTGATCCTGGGAACTTG 57.239 45.455 0.00 0.00 0.00 3.16
42 43 2.755103 CCTGGGAACTTGATTTGTAGGC 59.245 50.000 0.00 0.00 0.00 3.93
49 50 5.869344 GGAACTTGATTTGTAGGCCAATTTC 59.131 40.000 5.01 0.00 31.81 2.17
175 176 2.028385 GGGTTGGGTGAGTGTGTAGTAG 60.028 54.545 0.00 0.00 0.00 2.57
194 195 1.833630 AGGTTTGCTCCGATCTCATGA 59.166 47.619 0.00 0.00 0.00 3.07
201 202 2.668001 GCTCCGATCTCATGACATCTCG 60.668 54.545 9.01 6.87 0.00 4.04
242 243 3.146066 TGAATTTTCCACCTCCTTGACG 58.854 45.455 0.00 0.00 0.00 4.35
244 245 2.249844 TTTTCCACCTCCTTGACGAC 57.750 50.000 0.00 0.00 0.00 4.34
327 332 1.184970 TGAGCTCACACCACGATCCA 61.185 55.000 13.74 0.00 0.00 3.41
336 352 3.125829 CACACCACGATCCATCTTTTCTG 59.874 47.826 0.00 0.00 0.00 3.02
347 363 7.414873 CGATCCATCTTTTCTGTTGTCATCAAT 60.415 37.037 0.00 0.00 35.92 2.57
380 396 2.455674 TGACACAATTCCTCGACCAG 57.544 50.000 0.00 0.00 0.00 4.00
463 479 8.040727 TGCTAGTATAAACAAAGAAGAGATGCA 58.959 33.333 0.00 0.00 0.00 3.96
482 498 2.830370 CCTTGCTCAATCCGGCCC 60.830 66.667 0.00 0.00 0.00 5.80
483 499 2.045045 CTTGCTCAATCCGGCCCA 60.045 61.111 0.00 0.00 0.00 5.36
484 500 1.678635 CTTGCTCAATCCGGCCCAA 60.679 57.895 0.00 0.00 0.00 4.12
493 509 2.292828 ATCCGGCCCAAGGAAATATG 57.707 50.000 1.60 0.00 41.69 1.78
505 521 5.240183 CCAAGGAAATATGATGTGCTACCAG 59.760 44.000 0.00 0.00 0.00 4.00
527 543 4.280174 AGCGTTTAGGTGATACCGTGATAT 59.720 41.667 0.00 0.00 44.90 1.63
530 546 5.278610 CGTTTAGGTGATACCGTGATATGGA 60.279 44.000 0.00 0.00 44.90 3.41
540 556 2.477825 CGTGATATGGACTCTTGGCAG 58.522 52.381 0.00 0.00 0.00 4.85
554 570 1.377202 GGCAGCCGTTGGATCTCAA 60.377 57.895 0.00 0.00 0.00 3.02
566 582 3.420893 TGGATCTCAAATCAAACGGCTT 58.579 40.909 0.00 0.00 0.00 4.35
567 583 3.826157 TGGATCTCAAATCAAACGGCTTT 59.174 39.130 0.00 0.00 0.00 3.51
571 587 2.222886 TCAAATCAAACGGCTTTCGGA 58.777 42.857 0.00 0.00 44.45 4.55
637 656 1.865865 CGTGCAGGTACAACAACTCT 58.134 50.000 0.00 0.00 0.00 3.24
639 658 3.386486 CGTGCAGGTACAACAACTCTTA 58.614 45.455 0.00 0.00 0.00 2.10
657 676 1.399714 TAAGATGCCGTCGGATCTGT 58.600 50.000 17.49 12.39 0.00 3.41
672 691 1.052617 TCTGTGATCCAACGGTCCAA 58.947 50.000 0.00 0.00 0.00 3.53
674 693 2.039746 TCTGTGATCCAACGGTCCAAAT 59.960 45.455 0.00 0.00 0.00 2.32
721 740 5.178797 AGACCGATATCACCTGAAACTTTG 58.821 41.667 3.12 0.00 0.00 2.77
722 741 4.261801 ACCGATATCACCTGAAACTTTGG 58.738 43.478 3.12 0.00 0.00 3.28
725 744 4.155826 CGATATCACCTGAAACTTTGGCAA 59.844 41.667 3.12 0.00 0.00 4.52
726 745 5.163622 CGATATCACCTGAAACTTTGGCAAT 60.164 40.000 0.00 0.00 0.00 3.56
728 747 2.627699 TCACCTGAAACTTTGGCAATCC 59.372 45.455 0.00 0.00 0.00 3.01
729 748 1.613437 ACCTGAAACTTTGGCAATCCG 59.387 47.619 0.00 0.00 34.14 4.18
799 818 4.470764 GAGGCAGAGTTCCTCCCT 57.529 61.111 0.00 0.00 43.32 4.20
829 848 2.069430 CAGAGGAGGGGAGGCCTTC 61.069 68.421 6.77 3.67 33.84 3.46
830 849 2.770475 GAGGAGGGGAGGCCTTCC 60.770 72.222 23.75 23.75 46.00 3.46
944 970 0.396417 AGGGATCTCCACTCCACTCG 60.396 60.000 0.00 0.00 38.24 4.18
1106 1139 3.459063 GGTCGGTCCCCTTCCTCG 61.459 72.222 0.00 0.00 0.00 4.63
1434 1491 2.485302 GCTGGCTTTGTTGGTGGATTTT 60.485 45.455 0.00 0.00 0.00 1.82
1599 1675 1.333636 TTGTTTTGGCCTGGTGTGGG 61.334 55.000 3.32 0.00 0.00 4.61
1615 1691 1.133025 GTGGGATGGCGATTCACTTTG 59.867 52.381 8.23 0.00 0.00 2.77
1864 1941 4.038883 GCCATCCACGATACTTTACCTAGT 59.961 45.833 0.00 0.00 0.00 2.57
1866 1943 6.239120 GCCATCCACGATACTTTACCTAGTTA 60.239 42.308 0.00 0.00 0.00 2.24
1867 1944 7.368833 CCATCCACGATACTTTACCTAGTTAG 58.631 42.308 0.00 0.00 0.00 2.34
1868 1945 6.382869 TCCACGATACTTTACCTAGTTAGC 57.617 41.667 0.00 0.00 0.00 3.09
1869 1946 6.125029 TCCACGATACTTTACCTAGTTAGCT 58.875 40.000 0.00 0.00 0.00 3.32
1870 1947 6.604795 TCCACGATACTTTACCTAGTTAGCTT 59.395 38.462 0.00 0.00 0.00 3.74
1871 1948 6.696148 CCACGATACTTTACCTAGTTAGCTTG 59.304 42.308 0.00 0.00 0.00 4.01
1872 1949 7.415989 CCACGATACTTTACCTAGTTAGCTTGA 60.416 40.741 0.00 0.00 0.00 3.02
1873 1950 7.972277 CACGATACTTTACCTAGTTAGCTTGAA 59.028 37.037 0.00 0.00 0.00 2.69
1874 1951 8.526147 ACGATACTTTACCTAGTTAGCTTGAAA 58.474 33.333 0.00 0.00 0.00 2.69
1875 1952 9.362539 CGATACTTTACCTAGTTAGCTTGAAAA 57.637 33.333 0.00 0.00 0.00 2.29
1878 1955 7.858583 ACTTTACCTAGTTAGCTTGAAAAACG 58.141 34.615 0.00 0.00 0.00 3.60
1879 1956 7.712205 ACTTTACCTAGTTAGCTTGAAAAACGA 59.288 33.333 0.00 0.00 0.00 3.85
1880 1957 8.611654 TTTACCTAGTTAGCTTGAAAAACGAT 57.388 30.769 0.00 0.00 0.00 3.73
1881 1958 6.723131 ACCTAGTTAGCTTGAAAAACGATC 57.277 37.500 0.00 0.00 0.00 3.69
1882 1959 6.465084 ACCTAGTTAGCTTGAAAAACGATCT 58.535 36.000 0.00 0.00 0.00 2.75
1883 1960 6.935208 ACCTAGTTAGCTTGAAAAACGATCTT 59.065 34.615 0.00 0.00 0.00 2.40
1884 1961 8.092687 ACCTAGTTAGCTTGAAAAACGATCTTA 58.907 33.333 0.00 0.00 0.00 2.10
1885 1962 9.099454 CCTAGTTAGCTTGAAAAACGATCTTAT 57.901 33.333 0.00 0.00 0.00 1.73
1900 1977 6.921914 ACGATCTTATATTTTACTCCCTCCG 58.078 40.000 0.00 0.00 0.00 4.63
1901 1978 6.492772 ACGATCTTATATTTTACTCCCTCCGT 59.507 38.462 0.00 0.00 0.00 4.69
1902 1979 7.028361 CGATCTTATATTTTACTCCCTCCGTC 58.972 42.308 0.00 0.00 0.00 4.79
1903 1980 6.661304 TCTTATATTTTACTCCCTCCGTCC 57.339 41.667 0.00 0.00 0.00 4.79
1904 1981 5.541484 TCTTATATTTTACTCCCTCCGTCCC 59.459 44.000 0.00 0.00 0.00 4.46
1905 1982 1.961133 ATTTTACTCCCTCCGTCCCA 58.039 50.000 0.00 0.00 0.00 4.37
1906 1983 0.978907 TTTTACTCCCTCCGTCCCAC 59.021 55.000 0.00 0.00 0.00 4.61
1907 1984 0.178926 TTTACTCCCTCCGTCCCACA 60.179 55.000 0.00 0.00 0.00 4.17
1908 1985 0.178926 TTACTCCCTCCGTCCCACAA 60.179 55.000 0.00 0.00 0.00 3.33
1909 1986 0.042131 TACTCCCTCCGTCCCACAAT 59.958 55.000 0.00 0.00 0.00 2.71
1910 1987 0.042131 ACTCCCTCCGTCCCACAATA 59.958 55.000 0.00 0.00 0.00 1.90
1911 1988 1.344087 ACTCCCTCCGTCCCACAATAT 60.344 52.381 0.00 0.00 0.00 1.28
1912 1989 2.090943 ACTCCCTCCGTCCCACAATATA 60.091 50.000 0.00 0.00 0.00 0.86
1913 1990 2.969950 CTCCCTCCGTCCCACAATATAA 59.030 50.000 0.00 0.00 0.00 0.98
1914 1991 2.969950 TCCCTCCGTCCCACAATATAAG 59.030 50.000 0.00 0.00 0.00 1.73
1915 1992 2.969950 CCCTCCGTCCCACAATATAAGA 59.030 50.000 0.00 0.00 0.00 2.10
1916 1993 3.583086 CCCTCCGTCCCACAATATAAGAT 59.417 47.826 0.00 0.00 0.00 2.40
1917 1994 4.322801 CCCTCCGTCCCACAATATAAGATC 60.323 50.000 0.00 0.00 0.00 2.75
1918 1995 4.486090 CTCCGTCCCACAATATAAGATCG 58.514 47.826 0.00 0.00 0.00 3.69
1919 1996 3.893200 TCCGTCCCACAATATAAGATCGT 59.107 43.478 0.00 0.00 0.00 3.73
1920 1997 5.072055 TCCGTCCCACAATATAAGATCGTA 58.928 41.667 0.00 0.00 0.00 3.43
1921 1998 5.182570 TCCGTCCCACAATATAAGATCGTAG 59.817 44.000 0.00 0.00 0.00 3.51
1922 1999 4.857588 CGTCCCACAATATAAGATCGTAGC 59.142 45.833 0.00 0.00 0.00 3.58
1923 2000 5.335740 CGTCCCACAATATAAGATCGTAGCT 60.336 44.000 0.00 0.00 0.00 3.32
1924 2001 6.456501 GTCCCACAATATAAGATCGTAGCTT 58.543 40.000 0.00 0.00 0.00 3.74
1925 2002 6.366332 GTCCCACAATATAAGATCGTAGCTTG 59.634 42.308 0.00 9.78 0.00 4.01
1926 2003 6.266786 TCCCACAATATAAGATCGTAGCTTGA 59.733 38.462 15.19 0.00 0.00 3.02
1927 2004 6.929049 CCCACAATATAAGATCGTAGCTTGAA 59.071 38.462 15.19 0.00 0.00 2.69
1928 2005 7.441157 CCCACAATATAAGATCGTAGCTTGAAA 59.559 37.037 15.19 0.00 0.00 2.69
1929 2006 8.826710 CCACAATATAAGATCGTAGCTTGAAAA 58.173 33.333 15.19 0.00 0.00 2.29
1936 2013 7.856145 AAGATCGTAGCTTGAAAAATGATCT 57.144 32.000 9.80 9.80 43.31 2.75
1937 2014 7.856145 AGATCGTAGCTTGAAAAATGATCTT 57.144 32.000 9.80 0.00 40.24 2.40
1938 2015 8.948631 AGATCGTAGCTTGAAAAATGATCTTA 57.051 30.769 9.80 0.00 40.24 2.10
1939 2016 8.821894 AGATCGTAGCTTGAAAAATGATCTTAC 58.178 33.333 9.80 0.00 40.24 2.34
1940 2017 7.899178 TCGTAGCTTGAAAAATGATCTTACA 57.101 32.000 0.00 0.00 0.00 2.41
1941 2018 8.492673 TCGTAGCTTGAAAAATGATCTTACAT 57.507 30.769 0.00 0.00 0.00 2.29
1942 2019 8.946085 TCGTAGCTTGAAAAATGATCTTACATT 58.054 29.630 0.00 0.00 41.43 2.71
1943 2020 9.003112 CGTAGCTTGAAAAATGATCTTACATTG 57.997 33.333 0.00 0.00 39.88 2.82
1944 2021 9.846248 GTAGCTTGAAAAATGATCTTACATTGT 57.154 29.630 0.00 0.00 39.88 2.71
1945 2022 8.752766 AGCTTGAAAAATGATCTTACATTGTG 57.247 30.769 0.00 0.00 39.88 3.33
1946 2023 7.816031 AGCTTGAAAAATGATCTTACATTGTGG 59.184 33.333 0.00 0.00 39.88 4.17
1947 2024 7.063780 GCTTGAAAAATGATCTTACATTGTGGG 59.936 37.037 0.00 0.00 39.88 4.61
1948 2025 7.773489 TGAAAAATGATCTTACATTGTGGGA 57.227 32.000 0.00 0.00 39.88 4.37
1949 2026 8.365060 TGAAAAATGATCTTACATTGTGGGAT 57.635 30.769 0.00 3.07 39.88 3.85
1950 2027 8.252417 TGAAAAATGATCTTACATTGTGGGATG 58.748 33.333 0.00 0.00 39.88 3.51
1951 2028 6.720112 AAATGATCTTACATTGTGGGATGG 57.280 37.500 0.00 0.00 39.88 3.51
1952 2029 5.651612 ATGATCTTACATTGTGGGATGGA 57.348 39.130 0.00 0.00 0.00 3.41
1953 2030 5.039920 TGATCTTACATTGTGGGATGGAG 57.960 43.478 0.00 0.00 0.00 3.86
1954 2031 3.931907 TCTTACATTGTGGGATGGAGG 57.068 47.619 0.00 0.00 0.00 4.30
1955 2032 2.509548 TCTTACATTGTGGGATGGAGGG 59.490 50.000 0.00 0.00 0.00 4.30
1956 2033 2.278657 TACATTGTGGGATGGAGGGA 57.721 50.000 0.00 0.00 0.00 4.20
1957 2034 0.921896 ACATTGTGGGATGGAGGGAG 59.078 55.000 0.00 0.00 0.00 4.30
1958 2035 0.921896 CATTGTGGGATGGAGGGAGT 59.078 55.000 0.00 0.00 0.00 3.85
1959 2036 0.921896 ATTGTGGGATGGAGGGAGTG 59.078 55.000 0.00 0.00 0.00 3.51
1960 2037 1.852157 TTGTGGGATGGAGGGAGTGC 61.852 60.000 0.00 0.00 0.00 4.40
1961 2038 1.997874 GTGGGATGGAGGGAGTGCT 60.998 63.158 0.00 0.00 0.00 4.40
1962 2039 1.229951 TGGGATGGAGGGAGTGCTT 60.230 57.895 0.00 0.00 0.00 3.91
1963 2040 1.225704 GGGATGGAGGGAGTGCTTG 59.774 63.158 0.00 0.00 0.00 4.01
1964 2041 1.225704 GGATGGAGGGAGTGCTTGG 59.774 63.158 0.00 0.00 0.00 3.61
1965 2042 1.566298 GGATGGAGGGAGTGCTTGGT 61.566 60.000 0.00 0.00 0.00 3.67
1966 2043 0.329596 GATGGAGGGAGTGCTTGGTT 59.670 55.000 0.00 0.00 0.00 3.67
1967 2044 0.779997 ATGGAGGGAGTGCTTGGTTT 59.220 50.000 0.00 0.00 0.00 3.27
1968 2045 0.555769 TGGAGGGAGTGCTTGGTTTT 59.444 50.000 0.00 0.00 0.00 2.43
1982 2059 7.286775 AGTGCTTGGTTTTGATTCCTTTACTTA 59.713 33.333 0.00 0.00 0.00 2.24
2040 2117 7.550551 CGGAGTATGTATATGCTGATTCCAAAT 59.449 37.037 0.00 0.00 28.70 2.32
2052 2130 7.520798 TGCTGATTCCAAATAGATCAACCTAT 58.479 34.615 0.00 0.00 0.00 2.57
2087 2166 1.069513 GGGTGGGTTTACTTGGCAAAC 59.930 52.381 0.00 0.00 35.57 2.93
2139 2218 7.769044 CACATGGTTATTGGCTTACTAGTTAGT 59.231 37.037 10.40 0.00 40.24 2.24
2140 2219 7.769044 ACATGGTTATTGGCTTACTAGTTAGTG 59.231 37.037 10.40 0.19 37.10 2.74
2141 2220 7.248743 TGGTTATTGGCTTACTAGTTAGTGT 57.751 36.000 10.40 0.00 37.10 3.55
2147 2226 5.014858 TGGCTTACTAGTTAGTGTACTGCT 58.985 41.667 10.40 0.00 37.10 4.24
2151 2230 6.693545 GCTTACTAGTTAGTGTACTGCTGATG 59.306 42.308 10.40 0.00 37.10 3.07
2365 2446 0.313043 TTGGTCGTGGAAGAGACGTC 59.687 55.000 7.70 7.70 38.20 4.34
2566 2648 7.012421 CGGATTAAAAAGAGGAGGAAGGTATTG 59.988 40.741 0.00 0.00 0.00 1.90
3039 3123 8.274322 TGGGTGTTGATTGTATTCTATTGAGAT 58.726 33.333 0.00 0.00 0.00 2.75
3153 3240 6.150976 TGGTATCCTGCAACTTGTAAGAAATG 59.849 38.462 0.00 0.00 0.00 2.32
3368 3458 8.883731 CCGTCTCTATGTTTGATTAAATTCACT 58.116 33.333 0.00 0.00 0.00 3.41
3369 3459 9.694520 CGTCTCTATGTTTGATTAAATTCACTG 57.305 33.333 0.00 0.00 0.00 3.66
3453 3546 7.834881 ATGAAGCTGATGATATTGATTTGGT 57.165 32.000 0.00 0.00 0.00 3.67
3454 3547 8.929260 ATGAAGCTGATGATATTGATTTGGTA 57.071 30.769 0.00 0.00 0.00 3.25
3455 3548 8.929260 TGAAGCTGATGATATTGATTTGGTAT 57.071 30.769 0.00 0.00 0.00 2.73
3456 3549 9.358406 TGAAGCTGATGATATTGATTTGGTATT 57.642 29.630 0.00 0.00 0.00 1.89
3458 3551 9.976511 AAGCTGATGATATTGATTTGGTATTTG 57.023 29.630 0.00 0.00 0.00 2.32
3459 3552 9.139734 AGCTGATGATATTGATTTGGTATTTGT 57.860 29.630 0.00 0.00 0.00 2.83
3460 3553 9.188588 GCTGATGATATTGATTTGGTATTTGTG 57.811 33.333 0.00 0.00 0.00 3.33
3461 3554 9.687210 CTGATGATATTGATTTGGTATTTGTGG 57.313 33.333 0.00 0.00 0.00 4.17
3462 3555 9.418839 TGATGATATTGATTTGGTATTTGTGGA 57.581 29.630 0.00 0.00 0.00 4.02
3468 3561 7.716799 TTGATTTGGTATTTGTGGATAAGCT 57.283 32.000 0.00 0.00 0.00 3.74
3469 3562 7.716799 TGATTTGGTATTTGTGGATAAGCTT 57.283 32.000 3.48 3.48 0.00 3.74
3470 3563 7.546358 TGATTTGGTATTTGTGGATAAGCTTG 58.454 34.615 9.86 0.00 0.00 4.01
3471 3564 5.913137 TTGGTATTTGTGGATAAGCTTGG 57.087 39.130 9.86 0.00 0.00 3.61
3472 3565 4.929479 TGGTATTTGTGGATAAGCTTGGT 58.071 39.130 9.86 0.00 0.00 3.67
3473 3566 4.947388 TGGTATTTGTGGATAAGCTTGGTC 59.053 41.667 9.86 7.17 0.00 4.02
3474 3567 4.947388 GGTATTTGTGGATAAGCTTGGTCA 59.053 41.667 9.86 1.15 0.00 4.02
3475 3568 5.417580 GGTATTTGTGGATAAGCTTGGTCAA 59.582 40.000 9.86 4.93 0.00 3.18
3476 3569 6.071616 GGTATTTGTGGATAAGCTTGGTCAAA 60.072 38.462 9.86 12.90 0.00 2.69
3477 3570 4.846779 TTGTGGATAAGCTTGGTCAAAC 57.153 40.909 9.86 9.76 0.00 2.93
3478 3571 3.826524 TGTGGATAAGCTTGGTCAAACA 58.173 40.909 9.86 11.96 0.00 2.83
3479 3572 3.820467 TGTGGATAAGCTTGGTCAAACAG 59.180 43.478 9.86 0.00 0.00 3.16
3480 3573 4.072131 GTGGATAAGCTTGGTCAAACAGA 58.928 43.478 9.86 0.00 0.00 3.41
3481 3574 4.154918 GTGGATAAGCTTGGTCAAACAGAG 59.845 45.833 9.86 0.00 0.00 3.35
3482 3575 4.041567 TGGATAAGCTTGGTCAAACAGAGA 59.958 41.667 9.86 0.00 0.00 3.10
3483 3576 4.633565 GGATAAGCTTGGTCAAACAGAGAG 59.366 45.833 9.86 0.00 0.00 3.20
3484 3577 3.567478 AAGCTTGGTCAAACAGAGAGT 57.433 42.857 0.00 0.00 0.00 3.24
3485 3578 4.689612 AAGCTTGGTCAAACAGAGAGTA 57.310 40.909 0.00 0.00 0.00 2.59
3486 3579 4.264460 AGCTTGGTCAAACAGAGAGTAG 57.736 45.455 0.00 0.00 0.00 2.57
3487 3580 2.739379 GCTTGGTCAAACAGAGAGTAGC 59.261 50.000 0.00 0.00 0.00 3.58
3488 3581 3.556004 GCTTGGTCAAACAGAGAGTAGCT 60.556 47.826 0.00 0.00 0.00 3.32
3489 3582 4.636249 CTTGGTCAAACAGAGAGTAGCTT 58.364 43.478 0.00 0.00 0.00 3.74
3490 3583 3.995199 TGGTCAAACAGAGAGTAGCTTG 58.005 45.455 0.00 0.00 0.00 4.01
3491 3584 3.641436 TGGTCAAACAGAGAGTAGCTTGA 59.359 43.478 0.00 0.00 0.00 3.02
3492 3585 3.991121 GGTCAAACAGAGAGTAGCTTGAC 59.009 47.826 0.00 0.00 41.49 3.18
3493 3586 4.262249 GGTCAAACAGAGAGTAGCTTGACT 60.262 45.833 11.30 0.00 41.72 3.41
3494 3587 5.293560 GTCAAACAGAGAGTAGCTTGACTT 58.706 41.667 0.00 0.00 40.14 3.01
3495 3588 5.404066 GTCAAACAGAGAGTAGCTTGACTTC 59.596 44.000 0.00 0.00 40.14 3.01
3496 3589 5.303078 TCAAACAGAGAGTAGCTTGACTTCT 59.697 40.000 0.00 0.00 0.00 2.85
3497 3590 6.490381 TCAAACAGAGAGTAGCTTGACTTCTA 59.510 38.462 0.00 0.00 0.00 2.10
3498 3591 6.902771 AACAGAGAGTAGCTTGACTTCTAA 57.097 37.500 0.00 0.00 0.00 2.10
3499 3592 6.902771 ACAGAGAGTAGCTTGACTTCTAAA 57.097 37.500 0.00 0.00 0.00 1.85
3500 3593 7.291411 ACAGAGAGTAGCTTGACTTCTAAAA 57.709 36.000 0.00 0.00 0.00 1.52
3501 3594 7.902087 ACAGAGAGTAGCTTGACTTCTAAAAT 58.098 34.615 0.00 0.00 0.00 1.82
3502 3595 9.026121 ACAGAGAGTAGCTTGACTTCTAAAATA 57.974 33.333 0.00 0.00 0.00 1.40
3503 3596 9.515020 CAGAGAGTAGCTTGACTTCTAAAATAG 57.485 37.037 0.00 0.00 0.00 1.73
3504 3597 9.250246 AGAGAGTAGCTTGACTTCTAAAATAGT 57.750 33.333 0.00 0.00 0.00 2.12
3505 3598 9.296400 GAGAGTAGCTTGACTTCTAAAATAGTG 57.704 37.037 0.00 0.00 0.00 2.74
3506 3599 9.026121 AGAGTAGCTTGACTTCTAAAATAGTGA 57.974 33.333 0.00 0.00 0.00 3.41
3507 3600 9.810545 GAGTAGCTTGACTTCTAAAATAGTGAT 57.189 33.333 0.00 0.00 0.00 3.06
3508 3601 9.810545 AGTAGCTTGACTTCTAAAATAGTGATC 57.189 33.333 0.00 0.00 0.00 2.92
3509 3602 9.810545 GTAGCTTGACTTCTAAAATAGTGATCT 57.189 33.333 0.00 0.00 0.00 2.75
3524 3617 9.877178 AAATAGTGATCTAAACAGAGTACCTTG 57.123 33.333 0.00 0.00 0.00 3.61
3525 3618 5.725362 AGTGATCTAAACAGAGTACCTTGC 58.275 41.667 0.00 0.00 0.00 4.01
3526 3619 5.482175 AGTGATCTAAACAGAGTACCTTGCT 59.518 40.000 0.00 0.00 0.00 3.91
3527 3620 6.663953 AGTGATCTAAACAGAGTACCTTGCTA 59.336 38.462 0.00 0.00 0.00 3.49
3528 3621 6.752815 GTGATCTAAACAGAGTACCTTGCTAC 59.247 42.308 0.00 0.00 0.00 3.58
3529 3622 5.656213 TCTAAACAGAGTACCTTGCTACC 57.344 43.478 0.00 0.00 0.00 3.18
3530 3623 5.081728 TCTAAACAGAGTACCTTGCTACCA 58.918 41.667 0.00 0.00 0.00 3.25
3531 3624 4.699925 AAACAGAGTACCTTGCTACCAA 57.300 40.909 0.00 0.00 0.00 3.67
3532 3625 4.910458 AACAGAGTACCTTGCTACCAAT 57.090 40.909 0.00 0.00 0.00 3.16
3533 3626 4.910458 ACAGAGTACCTTGCTACCAATT 57.090 40.909 0.00 0.00 0.00 2.32
3534 3627 4.579869 ACAGAGTACCTTGCTACCAATTG 58.420 43.478 0.00 0.00 0.00 2.32
3535 3628 3.941483 CAGAGTACCTTGCTACCAATTGG 59.059 47.826 23.31 23.31 42.17 3.16
3536 3629 2.683362 GAGTACCTTGCTACCAATTGGC 59.317 50.000 24.79 11.18 39.32 4.52
3537 3630 2.041081 AGTACCTTGCTACCAATTGGCA 59.959 45.455 24.79 13.80 39.32 4.92
3538 3631 1.549203 ACCTTGCTACCAATTGGCAG 58.451 50.000 24.79 21.74 39.32 4.85
3547 3640 5.485662 CTACCAATTGGCAGCTTTAGTAC 57.514 43.478 24.79 0.00 39.32 2.73
3548 3641 3.761897 ACCAATTGGCAGCTTTAGTACA 58.238 40.909 24.79 0.00 39.32 2.90
3549 3642 4.148838 ACCAATTGGCAGCTTTAGTACAA 58.851 39.130 24.79 0.00 39.32 2.41
3550 3643 4.022329 ACCAATTGGCAGCTTTAGTACAAC 60.022 41.667 24.79 0.00 39.32 3.32
3551 3644 4.485163 CAATTGGCAGCTTTAGTACAACC 58.515 43.478 0.00 0.00 0.00 3.77
3552 3645 3.502123 TTGGCAGCTTTAGTACAACCT 57.498 42.857 0.00 0.00 0.00 3.50
3553 3646 2.778299 TGGCAGCTTTAGTACAACCTG 58.222 47.619 0.00 0.00 0.00 4.00
3554 3647 2.370519 TGGCAGCTTTAGTACAACCTGA 59.629 45.455 0.00 0.00 0.00 3.86
3555 3648 3.003480 GGCAGCTTTAGTACAACCTGAG 58.997 50.000 0.00 0.00 0.00 3.35
3556 3649 3.003480 GCAGCTTTAGTACAACCTGAGG 58.997 50.000 0.00 0.00 0.00 3.86
3557 3650 3.600388 CAGCTTTAGTACAACCTGAGGG 58.400 50.000 2.38 0.00 38.88 4.30
3558 3651 3.260884 CAGCTTTAGTACAACCTGAGGGA 59.739 47.826 2.38 0.00 36.25 4.20
3559 3652 3.515901 AGCTTTAGTACAACCTGAGGGAG 59.484 47.826 2.38 0.00 36.25 4.30
3560 3653 3.261137 GCTTTAGTACAACCTGAGGGAGT 59.739 47.826 2.38 3.13 36.25 3.85
3561 3654 4.465305 GCTTTAGTACAACCTGAGGGAGTA 59.535 45.833 2.38 2.02 36.25 2.59
3562 3655 5.624052 GCTTTAGTACAACCTGAGGGAGTAC 60.624 48.000 21.01 21.01 42.24 2.73
3563 3656 3.829728 AGTACAACCTGAGGGAGTACT 57.170 47.619 23.82 23.82 44.47 2.73
3564 3657 3.432378 AGTACAACCTGAGGGAGTACTG 58.568 50.000 26.76 8.72 45.82 2.74
3565 3658 0.977395 ACAACCTGAGGGAGTACTGC 59.023 55.000 5.70 5.70 36.25 4.40
3566 3659 0.976641 CAACCTGAGGGAGTACTGCA 59.023 55.000 16.81 0.86 36.25 4.41
3567 3660 1.347707 CAACCTGAGGGAGTACTGCAA 59.652 52.381 16.81 0.27 36.25 4.08
3568 3661 1.729586 ACCTGAGGGAGTACTGCAAA 58.270 50.000 16.81 0.00 36.25 3.68
3569 3662 2.269940 ACCTGAGGGAGTACTGCAAAT 58.730 47.619 16.81 1.09 36.25 2.32
3570 3663 2.644798 ACCTGAGGGAGTACTGCAAATT 59.355 45.455 16.81 0.00 36.25 1.82
3571 3664 3.074538 ACCTGAGGGAGTACTGCAAATTT 59.925 43.478 16.81 0.00 36.25 1.82
3572 3665 4.082125 CCTGAGGGAGTACTGCAAATTTT 58.918 43.478 16.81 0.00 33.58 1.82
3573 3666 5.222048 ACCTGAGGGAGTACTGCAAATTTTA 60.222 40.000 16.81 0.00 36.25 1.52
3574 3667 5.123979 CCTGAGGGAGTACTGCAAATTTTAC 59.876 44.000 16.81 0.00 33.58 2.01
3575 3668 5.007682 TGAGGGAGTACTGCAAATTTTACC 58.992 41.667 16.81 0.00 0.00 2.85
3576 3669 5.222048 TGAGGGAGTACTGCAAATTTTACCT 60.222 40.000 16.81 0.23 0.00 3.08
3577 3670 5.641155 AGGGAGTACTGCAAATTTTACCTT 58.359 37.500 16.81 0.00 0.00 3.50
3578 3671 6.075315 AGGGAGTACTGCAAATTTTACCTTT 58.925 36.000 16.81 0.00 0.00 3.11
3579 3672 6.208797 AGGGAGTACTGCAAATTTTACCTTTC 59.791 38.462 16.81 0.00 0.00 2.62
3580 3673 6.387465 GGAGTACTGCAAATTTTACCTTTCC 58.613 40.000 9.84 0.00 0.00 3.13
3581 3674 6.340962 AGTACTGCAAATTTTACCTTTCCC 57.659 37.500 0.00 0.00 0.00 3.97
3582 3675 4.251543 ACTGCAAATTTTACCTTTCCCG 57.748 40.909 0.00 0.00 0.00 5.14
3583 3676 3.006430 ACTGCAAATTTTACCTTTCCCGG 59.994 43.478 0.00 0.00 0.00 5.73
3584 3677 2.300437 TGCAAATTTTACCTTTCCCGGG 59.700 45.455 16.85 16.85 0.00 5.73
3585 3678 2.300723 GCAAATTTTACCTTTCCCGGGT 59.699 45.455 22.86 2.31 40.53 5.28
3586 3679 3.863021 GCAAATTTTACCTTTCCCGGGTG 60.863 47.826 22.86 12.04 37.65 4.61
3587 3680 2.984435 ATTTTACCTTTCCCGGGTGT 57.016 45.000 22.86 15.82 37.65 4.16
3588 3681 2.752075 TTTTACCTTTCCCGGGTGTT 57.248 45.000 22.86 3.17 37.65 3.32
3589 3682 2.275134 TTTACCTTTCCCGGGTGTTC 57.725 50.000 22.86 0.00 37.65 3.18
3590 3683 1.138568 TTACCTTTCCCGGGTGTTCA 58.861 50.000 22.86 0.00 37.65 3.18
3591 3684 1.138568 TACCTTTCCCGGGTGTTCAA 58.861 50.000 22.86 3.38 37.65 2.69
3592 3685 0.481128 ACCTTTCCCGGGTGTTCAAT 59.519 50.000 22.86 0.00 35.51 2.57
3593 3686 1.173913 CCTTTCCCGGGTGTTCAATC 58.826 55.000 22.86 0.00 0.00 2.67
3594 3687 1.271926 CCTTTCCCGGGTGTTCAATCT 60.272 52.381 22.86 0.00 0.00 2.40
3595 3688 2.514803 CTTTCCCGGGTGTTCAATCTT 58.485 47.619 22.86 0.00 0.00 2.40
3596 3689 2.668144 TTCCCGGGTGTTCAATCTTT 57.332 45.000 22.86 0.00 0.00 2.52
3597 3690 3.791953 TTCCCGGGTGTTCAATCTTTA 57.208 42.857 22.86 0.00 0.00 1.85
3598 3691 3.343941 TCCCGGGTGTTCAATCTTTAG 57.656 47.619 22.86 0.00 0.00 1.85
3599 3692 2.026636 TCCCGGGTGTTCAATCTTTAGG 60.027 50.000 22.86 0.00 0.00 2.69
3600 3693 1.743394 CCGGGTGTTCAATCTTTAGGC 59.257 52.381 0.00 0.00 0.00 3.93
3601 3694 1.743394 CGGGTGTTCAATCTTTAGGCC 59.257 52.381 0.00 0.00 0.00 5.19
3602 3695 2.618045 CGGGTGTTCAATCTTTAGGCCT 60.618 50.000 11.78 11.78 0.00 5.19
3603 3696 3.017442 GGGTGTTCAATCTTTAGGCCTC 58.983 50.000 9.68 0.00 0.00 4.70
3604 3697 3.561313 GGGTGTTCAATCTTTAGGCCTCA 60.561 47.826 9.68 0.00 0.00 3.86
3605 3698 4.273318 GGTGTTCAATCTTTAGGCCTCAT 58.727 43.478 9.68 0.00 0.00 2.90
3606 3699 4.706962 GGTGTTCAATCTTTAGGCCTCATT 59.293 41.667 9.68 0.25 0.00 2.57
3607 3700 5.163612 GGTGTTCAATCTTTAGGCCTCATTC 60.164 44.000 9.68 0.00 0.00 2.67
3608 3701 4.635765 TGTTCAATCTTTAGGCCTCATTCG 59.364 41.667 9.68 0.00 0.00 3.34
3609 3702 3.808728 TCAATCTTTAGGCCTCATTCGG 58.191 45.455 9.68 0.00 0.00 4.30
3610 3703 3.199946 TCAATCTTTAGGCCTCATTCGGT 59.800 43.478 9.68 0.00 0.00 4.69
3611 3704 3.933861 ATCTTTAGGCCTCATTCGGTT 57.066 42.857 9.68 0.00 0.00 4.44
3612 3705 5.104693 TCAATCTTTAGGCCTCATTCGGTTA 60.105 40.000 9.68 0.00 0.00 2.85
3613 3706 4.829872 TCTTTAGGCCTCATTCGGTTAA 57.170 40.909 9.68 0.00 0.00 2.01
3614 3707 4.766375 TCTTTAGGCCTCATTCGGTTAAG 58.234 43.478 9.68 0.56 0.00 1.85
3615 3708 3.553828 TTAGGCCTCATTCGGTTAAGG 57.446 47.619 9.68 0.00 0.00 2.69
3616 3709 0.546598 AGGCCTCATTCGGTTAAGGG 59.453 55.000 0.00 0.00 0.00 3.95
3617 3710 0.465642 GGCCTCATTCGGTTAAGGGG 60.466 60.000 0.00 0.00 0.00 4.79
3618 3711 0.465642 GCCTCATTCGGTTAAGGGGG 60.466 60.000 0.00 0.00 42.76 5.40
3619 3712 1.209621 CCTCATTCGGTTAAGGGGGA 58.790 55.000 0.00 0.00 42.47 4.81
3620 3713 1.562475 CCTCATTCGGTTAAGGGGGAA 59.438 52.381 0.00 0.00 42.47 3.97
3621 3714 2.640184 CTCATTCGGTTAAGGGGGAAC 58.360 52.381 0.00 0.00 0.00 3.62
3672 3765 6.335777 AGAAATTTGATAAGATGGCACTTGC 58.664 36.000 0.00 0.00 41.14 4.01
3686 3779 4.725790 GCACTTGCCATTCTAAGGAATT 57.274 40.909 0.00 0.00 39.87 2.17
3687 3780 4.427312 GCACTTGCCATTCTAAGGAATTG 58.573 43.478 0.00 0.00 39.87 2.32
3688 3781 4.082026 GCACTTGCCATTCTAAGGAATTGT 60.082 41.667 0.00 0.00 39.87 2.71
3689 3782 5.644644 CACTTGCCATTCTAAGGAATTGTC 58.355 41.667 0.00 0.00 39.87 3.18
3690 3783 5.416952 CACTTGCCATTCTAAGGAATTGTCT 59.583 40.000 0.00 0.00 39.87 3.41
3691 3784 6.012745 ACTTGCCATTCTAAGGAATTGTCTT 58.987 36.000 0.00 0.00 39.87 3.01
3692 3785 6.494835 ACTTGCCATTCTAAGGAATTGTCTTT 59.505 34.615 0.00 0.00 39.87 2.52
3693 3786 6.271488 TGCCATTCTAAGGAATTGTCTTTG 57.729 37.500 0.00 0.00 39.87 2.77
3694 3787 5.774690 TGCCATTCTAAGGAATTGTCTTTGT 59.225 36.000 0.00 0.00 39.87 2.83
3695 3788 6.945435 TGCCATTCTAAGGAATTGTCTTTGTA 59.055 34.615 0.00 0.00 39.87 2.41
3696 3789 7.615365 TGCCATTCTAAGGAATTGTCTTTGTAT 59.385 33.333 0.00 0.00 39.87 2.29
3697 3790 8.470002 GCCATTCTAAGGAATTGTCTTTGTATT 58.530 33.333 0.00 0.00 39.87 1.89
3698 3791 9.793252 CCATTCTAAGGAATTGTCTTTGTATTG 57.207 33.333 0.00 0.00 39.87 1.90
3702 3795 9.010029 TCTAAGGAATTGTCTTTGTATTGTTCC 57.990 33.333 0.00 0.00 35.31 3.62
3703 3796 7.839680 AAGGAATTGTCTTTGTATTGTTCCT 57.160 32.000 0.00 0.00 44.35 3.36
3704 3797 8.934023 AAGGAATTGTCTTTGTATTGTTCCTA 57.066 30.769 3.99 0.00 42.33 2.94
3705 3798 8.336801 AGGAATTGTCTTTGTATTGTTCCTAC 57.663 34.615 1.74 0.00 41.61 3.18
3706 3799 7.119262 AGGAATTGTCTTTGTATTGTTCCTACG 59.881 37.037 1.74 0.00 41.61 3.51
3707 3800 5.600908 TTGTCTTTGTATTGTTCCTACGC 57.399 39.130 0.00 0.00 0.00 4.42
3708 3801 4.633175 TGTCTTTGTATTGTTCCTACGCA 58.367 39.130 0.00 0.00 0.00 5.24
3709 3802 5.057819 TGTCTTTGTATTGTTCCTACGCAA 58.942 37.500 0.00 0.00 0.00 4.85
3710 3803 5.527951 TGTCTTTGTATTGTTCCTACGCAAA 59.472 36.000 0.00 0.00 0.00 3.68
3711 3804 6.038382 TGTCTTTGTATTGTTCCTACGCAAAA 59.962 34.615 0.00 0.00 0.00 2.44
3712 3805 6.913673 GTCTTTGTATTGTTCCTACGCAAAAA 59.086 34.615 0.00 0.00 0.00 1.94
3713 3806 7.593644 GTCTTTGTATTGTTCCTACGCAAAAAT 59.406 33.333 0.00 0.00 0.00 1.82
3714 3807 8.784994 TCTTTGTATTGTTCCTACGCAAAAATA 58.215 29.630 0.00 0.00 0.00 1.40
3715 3808 9.400638 CTTTGTATTGTTCCTACGCAAAAATAA 57.599 29.630 0.00 0.00 0.00 1.40
3716 3809 8.958175 TTGTATTGTTCCTACGCAAAAATAAG 57.042 30.769 0.00 0.00 0.00 1.73
3717 3810 7.024768 TGTATTGTTCCTACGCAAAAATAAGC 58.975 34.615 0.00 0.00 0.00 3.09
3718 3811 5.699097 TTGTTCCTACGCAAAAATAAGCT 57.301 34.783 0.00 0.00 0.00 3.74
3719 3812 5.699097 TGTTCCTACGCAAAAATAAGCTT 57.301 34.783 3.48 3.48 0.00 3.74
3720 3813 6.079424 TGTTCCTACGCAAAAATAAGCTTT 57.921 33.333 3.20 0.00 0.00 3.51
3721 3814 5.918011 TGTTCCTACGCAAAAATAAGCTTTG 59.082 36.000 3.20 0.00 36.94 2.77
3722 3815 5.950758 TCCTACGCAAAAATAAGCTTTGA 57.049 34.783 3.20 0.00 36.12 2.69
3723 3816 5.938322 TCCTACGCAAAAATAAGCTTTGAG 58.062 37.500 3.20 0.10 38.88 3.02
3724 3817 5.472137 TCCTACGCAAAAATAAGCTTTGAGT 59.528 36.000 3.20 7.00 45.09 3.41
3725 3818 5.569059 CCTACGCAAAAATAAGCTTTGAGTG 59.431 40.000 3.20 0.00 43.62 3.51
3726 3819 5.181690 ACGCAAAAATAAGCTTTGAGTGA 57.818 34.783 3.20 0.00 42.68 3.41
3727 3820 5.587289 ACGCAAAAATAAGCTTTGAGTGAA 58.413 33.333 3.20 0.00 42.68 3.18
3728 3821 5.687285 ACGCAAAAATAAGCTTTGAGTGAAG 59.313 36.000 3.20 0.00 42.68 3.02
3729 3822 5.117592 CGCAAAAATAAGCTTTGAGTGAAGG 59.882 40.000 3.20 0.00 36.12 3.46
3730 3823 5.985530 GCAAAAATAAGCTTTGAGTGAAGGT 59.014 36.000 3.20 0.00 38.90 3.50
3731 3824 6.074142 GCAAAAATAAGCTTTGAGTGAAGGTG 60.074 38.462 3.20 0.00 37.43 4.00
3732 3825 6.715347 AAAATAAGCTTTGAGTGAAGGTGT 57.285 33.333 3.20 0.00 37.43 4.16
3733 3826 7.817418 AAAATAAGCTTTGAGTGAAGGTGTA 57.183 32.000 3.20 0.00 37.43 2.90
3734 3827 7.440523 AAATAAGCTTTGAGTGAAGGTGTAG 57.559 36.000 3.20 0.00 37.43 2.74
3735 3828 4.689612 AAGCTTTGAGTGAAGGTGTAGA 57.310 40.909 0.00 0.00 37.43 2.59
3736 3829 4.899352 AGCTTTGAGTGAAGGTGTAGAT 57.101 40.909 0.00 0.00 36.13 1.98
3737 3830 5.234466 AGCTTTGAGTGAAGGTGTAGATT 57.766 39.130 0.00 0.00 36.13 2.40
3738 3831 5.241662 AGCTTTGAGTGAAGGTGTAGATTC 58.758 41.667 0.00 0.00 36.13 2.52
3739 3832 4.393371 GCTTTGAGTGAAGGTGTAGATTCC 59.607 45.833 0.00 0.00 0.00 3.01
3740 3833 5.799213 CTTTGAGTGAAGGTGTAGATTCCT 58.201 41.667 0.00 0.00 35.34 3.36
3741 3834 5.825593 TTGAGTGAAGGTGTAGATTCCTT 57.174 39.130 0.00 0.00 45.35 3.36
3750 3843 6.635030 AGGTGTAGATTCCTTCAAAAACAC 57.365 37.500 0.00 0.00 0.00 3.32
3751 3844 6.126409 AGGTGTAGATTCCTTCAAAAACACA 58.874 36.000 0.00 0.00 0.00 3.72
3752 3845 6.605594 AGGTGTAGATTCCTTCAAAAACACAA 59.394 34.615 0.00 0.00 0.00 3.33
3753 3846 7.123547 AGGTGTAGATTCCTTCAAAAACACAAA 59.876 33.333 0.00 0.00 0.00 2.83
3754 3847 7.762159 GGTGTAGATTCCTTCAAAAACACAAAA 59.238 33.333 0.00 0.00 0.00 2.44
3755 3848 9.145865 GTGTAGATTCCTTCAAAAACACAAAAA 57.854 29.630 0.00 0.00 0.00 1.94
3782 3875 9.751542 ATGAGTAGTATTCTTACGAAATTCCTG 57.248 33.333 0.00 0.00 33.32 3.86
3783 3876 8.746530 TGAGTAGTATTCTTACGAAATTCCTGT 58.253 33.333 0.00 0.00 33.32 4.00
3786 3879 9.793252 GTAGTATTCTTACGAAATTCCTGTACA 57.207 33.333 0.00 0.00 33.32 2.90
3788 3881 9.715121 AGTATTCTTACGAAATTCCTGTACAAA 57.285 29.630 0.00 0.00 33.32 2.83
3793 3886 9.887406 TCTTACGAAATTCCTGTACAAATTTTC 57.113 29.630 15.86 13.51 35.72 2.29
3794 3887 9.124807 CTTACGAAATTCCTGTACAAATTTTCC 57.875 33.333 15.86 6.90 35.72 3.13
3795 3888 7.284919 ACGAAATTCCTGTACAAATTTTCCT 57.715 32.000 15.86 5.78 35.72 3.36
3796 3889 7.368059 ACGAAATTCCTGTACAAATTTTCCTC 58.632 34.615 15.86 6.21 35.72 3.71
3797 3890 7.230712 ACGAAATTCCTGTACAAATTTTCCTCT 59.769 33.333 15.86 0.00 35.72 3.69
3798 3891 8.726988 CGAAATTCCTGTACAAATTTTCCTCTA 58.273 33.333 15.86 0.00 35.72 2.43
3840 3933 8.590204 TGTTTTCCTATTAAAATCCTCCAAACC 58.410 33.333 0.00 0.00 31.43 3.27
3841 3934 7.399245 TTTCCTATTAAAATCCTCCAAACCG 57.601 36.000 0.00 0.00 0.00 4.44
3842 3935 5.442391 TCCTATTAAAATCCTCCAAACCGG 58.558 41.667 0.00 0.00 0.00 5.28
3843 3936 5.192121 TCCTATTAAAATCCTCCAAACCGGA 59.808 40.000 9.46 0.00 43.61 5.14
3844 3937 6.068670 CCTATTAAAATCCTCCAAACCGGAT 58.931 40.000 9.46 0.00 45.19 4.18
3845 3938 5.852282 ATTAAAATCCTCCAAACCGGATG 57.148 39.130 9.46 6.76 45.19 3.51
3846 3939 3.449746 AAAATCCTCCAAACCGGATGA 57.550 42.857 9.46 0.00 45.19 2.92
3847 3940 3.449746 AAATCCTCCAAACCGGATGAA 57.550 42.857 9.46 0.00 45.19 2.57
3848 3941 2.717639 ATCCTCCAAACCGGATGAAG 57.282 50.000 9.46 0.00 45.19 3.02
3849 3942 0.035439 TCCTCCAAACCGGATGAAGC 60.035 55.000 9.46 0.00 45.19 3.86
3850 3943 1.032114 CCTCCAAACCGGATGAAGCC 61.032 60.000 9.46 0.00 45.19 4.35
3851 3944 0.035056 CTCCAAACCGGATGAAGCCT 60.035 55.000 9.46 0.00 45.19 4.58
3852 3945 0.404040 TCCAAACCGGATGAAGCCTT 59.596 50.000 9.46 0.00 39.64 4.35
3853 3946 1.631388 TCCAAACCGGATGAAGCCTTA 59.369 47.619 9.46 0.00 39.64 2.69
3854 3947 2.040545 TCCAAACCGGATGAAGCCTTAA 59.959 45.455 9.46 0.00 39.64 1.85
3855 3948 2.823154 CCAAACCGGATGAAGCCTTAAA 59.177 45.455 9.46 0.00 36.56 1.52
3856 3949 3.257127 CCAAACCGGATGAAGCCTTAAAA 59.743 43.478 9.46 0.00 36.56 1.52
3857 3950 4.485163 CAAACCGGATGAAGCCTTAAAAG 58.515 43.478 9.46 0.00 0.00 2.27
3858 3951 3.713826 ACCGGATGAAGCCTTAAAAGA 57.286 42.857 9.46 0.00 0.00 2.52
3859 3952 3.344515 ACCGGATGAAGCCTTAAAAGAC 58.655 45.455 9.46 0.00 0.00 3.01
3860 3953 2.683362 CCGGATGAAGCCTTAAAAGACC 59.317 50.000 0.00 0.00 0.00 3.85
3861 3954 3.343617 CGGATGAAGCCTTAAAAGACCA 58.656 45.455 0.00 0.00 0.00 4.02
3862 3955 3.375299 CGGATGAAGCCTTAAAAGACCAG 59.625 47.826 0.00 0.00 0.00 4.00
3863 3956 3.696548 GGATGAAGCCTTAAAAGACCAGG 59.303 47.826 0.00 0.00 0.00 4.45
3864 3957 3.876309 TGAAGCCTTAAAAGACCAGGT 57.124 42.857 0.00 0.00 0.00 4.00
3865 3958 3.486383 TGAAGCCTTAAAAGACCAGGTG 58.514 45.455 0.00 0.00 0.00 4.00
3866 3959 3.137544 TGAAGCCTTAAAAGACCAGGTGA 59.862 43.478 0.00 0.00 0.00 4.02
3867 3960 3.876309 AGCCTTAAAAGACCAGGTGAA 57.124 42.857 0.00 0.00 0.00 3.18
3868 3961 3.756117 AGCCTTAAAAGACCAGGTGAAG 58.244 45.455 0.00 0.00 0.00 3.02
3869 3962 2.820197 GCCTTAAAAGACCAGGTGAAGG 59.180 50.000 0.00 3.22 35.99 3.46
3870 3963 3.497942 GCCTTAAAAGACCAGGTGAAGGA 60.498 47.826 0.00 0.00 35.06 3.36
3871 3964 4.811063 GCCTTAAAAGACCAGGTGAAGGAT 60.811 45.833 0.00 0.00 35.06 3.24
3872 3965 5.325239 CCTTAAAAGACCAGGTGAAGGATT 58.675 41.667 0.00 0.00 35.06 3.01
3873 3966 5.775195 CCTTAAAAGACCAGGTGAAGGATTT 59.225 40.000 0.00 0.00 35.06 2.17
3874 3967 6.294731 CCTTAAAAGACCAGGTGAAGGATTTG 60.295 42.308 0.00 0.00 35.06 2.32
3875 3968 3.884037 AAGACCAGGTGAAGGATTTGT 57.116 42.857 0.00 0.00 0.00 2.83
3876 3969 4.993705 AAGACCAGGTGAAGGATTTGTA 57.006 40.909 0.00 0.00 0.00 2.41
3877 3970 4.993705 AGACCAGGTGAAGGATTTGTAA 57.006 40.909 0.00 0.00 0.00 2.41
3878 3971 4.652822 AGACCAGGTGAAGGATTTGTAAC 58.347 43.478 0.00 0.00 0.00 2.50
3879 3972 3.408634 ACCAGGTGAAGGATTTGTAACG 58.591 45.455 0.00 0.00 0.00 3.18
3880 3973 2.161609 CCAGGTGAAGGATTTGTAACGC 59.838 50.000 0.00 0.00 0.00 4.84
3881 3974 2.161609 CAGGTGAAGGATTTGTAACGCC 59.838 50.000 0.00 0.00 0.00 5.68
3882 3975 2.039879 AGGTGAAGGATTTGTAACGCCT 59.960 45.455 0.00 0.00 34.15 5.52
3883 3976 2.817844 GGTGAAGGATTTGTAACGCCTT 59.182 45.455 0.00 0.00 43.09 4.35
3888 3981 4.820894 AGGATTTGTAACGCCTTCTACT 57.179 40.909 0.00 0.00 0.00 2.57
3889 3982 5.161943 AGGATTTGTAACGCCTTCTACTT 57.838 39.130 0.00 0.00 0.00 2.24
3890 3983 6.290294 AGGATTTGTAACGCCTTCTACTTA 57.710 37.500 0.00 0.00 0.00 2.24
3891 3984 6.104665 AGGATTTGTAACGCCTTCTACTTAC 58.895 40.000 0.00 0.00 0.00 2.34
3892 3985 6.070938 AGGATTTGTAACGCCTTCTACTTACT 60.071 38.462 0.00 0.00 0.00 2.24
3893 3986 6.255237 GGATTTGTAACGCCTTCTACTTACTC 59.745 42.308 0.00 0.00 0.00 2.59
3894 3987 4.708726 TGTAACGCCTTCTACTTACTCC 57.291 45.455 0.00 0.00 0.00 3.85
3895 3988 3.445096 TGTAACGCCTTCTACTTACTCCC 59.555 47.826 0.00 0.00 0.00 4.30
3896 3989 2.528673 ACGCCTTCTACTTACTCCCT 57.471 50.000 0.00 0.00 0.00 4.20
3897 3990 2.817665 ACGCCTTCTACTTACTCCCTT 58.182 47.619 0.00 0.00 0.00 3.95
3898 3991 2.759535 ACGCCTTCTACTTACTCCCTTC 59.240 50.000 0.00 0.00 0.00 3.46
3899 3992 2.223525 CGCCTTCTACTTACTCCCTTCG 60.224 54.545 0.00 0.00 0.00 3.79
3900 3993 3.022406 GCCTTCTACTTACTCCCTTCGA 58.978 50.000 0.00 0.00 0.00 3.71
3901 3994 3.637694 GCCTTCTACTTACTCCCTTCGAT 59.362 47.826 0.00 0.00 0.00 3.59
3902 3995 4.261698 GCCTTCTACTTACTCCCTTCGATC 60.262 50.000 0.00 0.00 0.00 3.69
3903 3996 5.134661 CCTTCTACTTACTCCCTTCGATCT 58.865 45.833 0.00 0.00 0.00 2.75
3904 3997 6.297582 CCTTCTACTTACTCCCTTCGATCTA 58.702 44.000 0.00 0.00 0.00 1.98
3905 3998 6.943718 CCTTCTACTTACTCCCTTCGATCTAT 59.056 42.308 0.00 0.00 0.00 1.98
3906 3999 8.102047 CCTTCTACTTACTCCCTTCGATCTATA 58.898 40.741 0.00 0.00 0.00 1.31
3907 4000 9.675464 CTTCTACTTACTCCCTTCGATCTATAT 57.325 37.037 0.00 0.00 0.00 0.86
3916 4009 8.244802 ACTCCCTTCGATCTATATTAATTGTCG 58.755 37.037 0.00 0.00 0.00 4.35
3917 4010 8.118976 TCCCTTCGATCTATATTAATTGTCGT 57.881 34.615 0.00 0.00 0.00 4.34
3918 4011 8.582437 TCCCTTCGATCTATATTAATTGTCGTT 58.418 33.333 0.00 0.00 0.00 3.85
3919 4012 9.204570 CCCTTCGATCTATATTAATTGTCGTTT 57.795 33.333 0.00 0.00 0.00 3.60
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 7.728847 AAACAAAGAAATTGGCCTACAAATC 57.271 32.000 3.32 0.00 43.46 2.17
69 70 7.488792 TCAATGTGAAGTTGTTGTTGAGAAATG 59.511 33.333 0.00 0.00 0.00 2.32
70 71 7.546358 TCAATGTGAAGTTGTTGTTGAGAAAT 58.454 30.769 0.00 0.00 0.00 2.17
99 100 4.689549 TCTTCCTCCCGCCGGACA 62.690 66.667 5.05 0.00 33.32 4.02
139 140 3.181454 CCCAACCCGATATAGCTGAGTTT 60.181 47.826 0.00 0.00 0.00 2.66
175 176 1.936547 GTCATGAGATCGGAGCAAACC 59.063 52.381 0.00 0.00 0.00 3.27
228 229 1.353358 TCTAGTCGTCAAGGAGGTGGA 59.647 52.381 0.00 0.00 0.00 4.02
347 363 3.836365 TGTGTCATGGAAGAACTGTCA 57.164 42.857 0.00 0.00 0.00 3.58
351 367 4.990526 AGGAATTGTGTCATGGAAGAACT 58.009 39.130 0.00 0.00 0.00 3.01
406 422 6.740411 ATGTGTGTTGCAACAAAAGAAAAT 57.260 29.167 32.61 16.21 41.21 1.82
463 479 2.044946 GCCGGATTGAGCAAGGGT 60.045 61.111 5.05 0.00 0.00 4.34
482 498 5.278169 GCTGGTAGCACATCATATTTCCTTG 60.278 44.000 0.00 0.00 41.89 3.61
483 499 4.823989 GCTGGTAGCACATCATATTTCCTT 59.176 41.667 0.00 0.00 41.89 3.36
484 500 4.392940 GCTGGTAGCACATCATATTTCCT 58.607 43.478 0.00 0.00 41.89 3.36
493 509 1.933853 CCTAAACGCTGGTAGCACATC 59.066 52.381 1.45 0.00 42.58 3.06
505 521 2.282701 TCACGGTATCACCTAAACGC 57.717 50.000 0.00 0.00 35.66 4.84
527 543 2.818169 AACGGCTGCCAAGAGTCCA 61.818 57.895 20.29 0.00 0.00 4.02
530 546 2.129555 ATCCAACGGCTGCCAAGAGT 62.130 55.000 20.29 5.22 0.00 3.24
540 556 3.501950 GTTTGATTTGAGATCCAACGGC 58.498 45.455 0.00 0.00 33.85 5.68
554 570 2.989422 CTTCCGAAAGCCGTTTGATT 57.011 45.000 0.00 0.00 36.31 2.57
566 582 5.060506 TGTAAATGTTCAAGAGCTTCCGAA 58.939 37.500 0.00 0.00 0.00 4.30
567 583 4.637276 TGTAAATGTTCAAGAGCTTCCGA 58.363 39.130 0.00 0.00 0.00 4.55
595 614 4.737765 GCAATGTCGAGACTCTTAGATCAC 59.262 45.833 4.78 0.00 0.00 3.06
597 616 3.971871 CGCAATGTCGAGACTCTTAGATC 59.028 47.826 4.78 0.00 0.00 2.75
601 620 2.863739 CACGCAATGTCGAGACTCTTA 58.136 47.619 4.78 0.00 0.00 2.10
610 629 1.288419 TGTACCTGCACGCAATGTCG 61.288 55.000 0.00 0.00 0.00 4.35
613 632 0.590682 TGTTGTACCTGCACGCAATG 59.409 50.000 0.00 0.00 0.00 2.82
637 656 1.754803 ACAGATCCGACGGCATCTTAA 59.245 47.619 19.75 0.00 0.00 1.85
639 658 0.179100 CACAGATCCGACGGCATCTT 60.179 55.000 19.75 12.15 0.00 2.40
657 676 2.432444 GACATTTGGACCGTTGGATCA 58.568 47.619 0.00 0.00 0.00 2.92
683 702 3.093717 CGGTCTTCATATGCTACCGTT 57.906 47.619 23.88 0.00 46.10 4.44
704 723 5.127682 GGATTGCCAAAGTTTCAGGTGATAT 59.872 40.000 0.00 0.00 0.00 1.63
722 741 1.728490 GAACTGGATGGCCGGATTGC 61.728 60.000 5.05 0.00 43.76 3.56
725 744 2.919043 GGAACTGGATGGCCGGAT 59.081 61.111 5.05 0.00 43.76 4.18
726 745 3.781307 CGGAACTGGATGGCCGGA 61.781 66.667 5.05 0.00 43.76 5.14
728 747 1.595382 GATCGGAACTGGATGGCCG 60.595 63.158 0.00 0.00 44.83 6.13
729 748 0.533755 CTGATCGGAACTGGATGGCC 60.534 60.000 0.00 0.00 0.00 5.36
778 797 2.604686 AGGAACTCTGCCTCCGCA 60.605 61.111 0.00 0.00 44.78 5.69
829 848 1.228510 GAGAAGATGGGGCAAGGGG 59.771 63.158 0.00 0.00 0.00 4.79
830 849 1.228510 GGAGAAGATGGGGCAAGGG 59.771 63.158 0.00 0.00 0.00 3.95
835 854 1.847088 AGGTAAAGGAGAAGATGGGGC 59.153 52.381 0.00 0.00 0.00 5.80
998 1030 1.452108 GCCTGGTTCTTCCCCATCG 60.452 63.158 0.00 0.00 34.77 3.84
1434 1491 6.293955 GCCAAAATTACAGAGTGCAGAAACTA 60.294 38.462 0.00 0.00 0.00 2.24
1615 1691 9.408069 AGCTTAATTCGTTACTATATGCACTAC 57.592 33.333 0.00 0.00 0.00 2.73
1873 1950 9.557061 GGAGGGAGTAAAATATAAGATCGTTTT 57.443 33.333 0.00 0.00 0.00 2.43
1874 1951 7.871463 CGGAGGGAGTAAAATATAAGATCGTTT 59.129 37.037 0.00 0.00 0.00 3.60
1875 1952 7.015001 ACGGAGGGAGTAAAATATAAGATCGTT 59.985 37.037 0.00 0.00 0.00 3.85
1877 1954 6.921914 ACGGAGGGAGTAAAATATAAGATCG 58.078 40.000 0.00 0.00 0.00 3.69
1878 1955 7.321908 GGACGGAGGGAGTAAAATATAAGATC 58.678 42.308 0.00 0.00 0.00 2.75
1879 1956 6.212993 GGGACGGAGGGAGTAAAATATAAGAT 59.787 42.308 0.00 0.00 0.00 2.40
1880 1957 5.541484 GGGACGGAGGGAGTAAAATATAAGA 59.459 44.000 0.00 0.00 0.00 2.10
1881 1958 5.306160 TGGGACGGAGGGAGTAAAATATAAG 59.694 44.000 0.00 0.00 0.00 1.73
1882 1959 5.070847 GTGGGACGGAGGGAGTAAAATATAA 59.929 44.000 0.00 0.00 0.00 0.98
1883 1960 4.590222 GTGGGACGGAGGGAGTAAAATATA 59.410 45.833 0.00 0.00 0.00 0.86
1884 1961 3.390311 GTGGGACGGAGGGAGTAAAATAT 59.610 47.826 0.00 0.00 0.00 1.28
1885 1962 2.767960 GTGGGACGGAGGGAGTAAAATA 59.232 50.000 0.00 0.00 0.00 1.40
1886 1963 1.558294 GTGGGACGGAGGGAGTAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
1889 1966 0.178926 TTGTGGGACGGAGGGAGTAA 60.179 55.000 0.00 0.00 0.00 2.24
1890 1967 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.000 0.00 0.00 0.00 2.59
1891 1968 0.042131 TATTGTGGGACGGAGGGAGT 59.958 55.000 0.00 0.00 0.00 3.85
1892 1969 1.424638 ATATTGTGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
1893 1970 2.779429 TATATTGTGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
1894 1971 2.969950 TCTTATATTGTGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
1896 1973 4.022242 ACGATCTTATATTGTGGGACGGAG 60.022 45.833 0.00 0.00 0.00 4.63
1900 1977 6.026947 AGCTACGATCTTATATTGTGGGAC 57.973 41.667 0.00 0.00 0.00 4.46
1901 1978 6.266786 TCAAGCTACGATCTTATATTGTGGGA 59.733 38.462 0.00 0.00 0.00 4.37
1902 1979 6.455647 TCAAGCTACGATCTTATATTGTGGG 58.544 40.000 0.00 0.00 0.00 4.61
1903 1980 7.946655 TTCAAGCTACGATCTTATATTGTGG 57.053 36.000 0.00 0.00 0.00 4.17
1910 1987 9.553064 AGATCATTTTTCAAGCTACGATCTTAT 57.447 29.630 0.00 0.00 35.93 1.73
1911 1988 8.948631 AGATCATTTTTCAAGCTACGATCTTA 57.051 30.769 0.00 0.00 35.93 2.10
1912 1989 7.856145 AGATCATTTTTCAAGCTACGATCTT 57.144 32.000 0.00 0.00 35.93 2.40
1913 1990 7.856145 AAGATCATTTTTCAAGCTACGATCT 57.144 32.000 0.00 0.00 39.92 2.75
1914 1991 8.604035 TGTAAGATCATTTTTCAAGCTACGATC 58.396 33.333 0.00 0.00 0.00 3.69
1915 1992 8.492673 TGTAAGATCATTTTTCAAGCTACGAT 57.507 30.769 0.00 0.00 0.00 3.73
1916 1993 7.899178 TGTAAGATCATTTTTCAAGCTACGA 57.101 32.000 0.00 0.00 0.00 3.43
1917 1994 9.003112 CAATGTAAGATCATTTTTCAAGCTACG 57.997 33.333 0.00 0.00 36.10 3.51
1918 1995 9.846248 ACAATGTAAGATCATTTTTCAAGCTAC 57.154 29.630 0.00 0.00 36.10 3.58
1919 1996 9.844790 CACAATGTAAGATCATTTTTCAAGCTA 57.155 29.630 0.00 0.00 36.10 3.32
1920 1997 7.816031 CCACAATGTAAGATCATTTTTCAAGCT 59.184 33.333 0.00 0.00 36.10 3.74
1921 1998 7.063780 CCCACAATGTAAGATCATTTTTCAAGC 59.936 37.037 0.00 0.00 36.10 4.01
1922 1999 8.306038 TCCCACAATGTAAGATCATTTTTCAAG 58.694 33.333 0.00 0.00 36.10 3.02
1923 2000 8.187913 TCCCACAATGTAAGATCATTTTTCAA 57.812 30.769 0.00 0.00 36.10 2.69
1924 2001 7.773489 TCCCACAATGTAAGATCATTTTTCA 57.227 32.000 0.00 0.00 36.10 2.69
1925 2002 7.707893 CCATCCCACAATGTAAGATCATTTTTC 59.292 37.037 0.00 0.00 36.10 2.29
1926 2003 7.399765 TCCATCCCACAATGTAAGATCATTTTT 59.600 33.333 0.00 0.00 36.10 1.94
1927 2004 6.896860 TCCATCCCACAATGTAAGATCATTTT 59.103 34.615 0.00 0.00 36.10 1.82
1928 2005 6.434302 TCCATCCCACAATGTAAGATCATTT 58.566 36.000 0.00 0.00 36.10 2.32
1929 2006 6.017211 TCCATCCCACAATGTAAGATCATT 57.983 37.500 0.00 0.00 38.38 2.57
1930 2007 5.457197 CCTCCATCCCACAATGTAAGATCAT 60.457 44.000 0.00 0.00 0.00 2.45
1931 2008 4.141413 CCTCCATCCCACAATGTAAGATCA 60.141 45.833 0.00 0.00 0.00 2.92
1932 2009 4.392940 CCTCCATCCCACAATGTAAGATC 58.607 47.826 0.00 0.00 0.00 2.75
1933 2010 3.139025 CCCTCCATCCCACAATGTAAGAT 59.861 47.826 0.00 0.00 0.00 2.40
1934 2011 2.509548 CCCTCCATCCCACAATGTAAGA 59.490 50.000 0.00 0.00 0.00 2.10
1935 2012 2.509548 TCCCTCCATCCCACAATGTAAG 59.490 50.000 0.00 0.00 0.00 2.34
1936 2013 2.509548 CTCCCTCCATCCCACAATGTAA 59.490 50.000 0.00 0.00 0.00 2.41
1937 2014 2.126882 CTCCCTCCATCCCACAATGTA 58.873 52.381 0.00 0.00 0.00 2.29
1938 2015 0.921896 CTCCCTCCATCCCACAATGT 59.078 55.000 0.00 0.00 0.00 2.71
1939 2016 0.921896 ACTCCCTCCATCCCACAATG 59.078 55.000 0.00 0.00 0.00 2.82
1940 2017 0.921896 CACTCCCTCCATCCCACAAT 59.078 55.000 0.00 0.00 0.00 2.71
1941 2018 1.852157 GCACTCCCTCCATCCCACAA 61.852 60.000 0.00 0.00 0.00 3.33
1942 2019 2.300967 GCACTCCCTCCATCCCACA 61.301 63.158 0.00 0.00 0.00 4.17
1943 2020 1.566298 AAGCACTCCCTCCATCCCAC 61.566 60.000 0.00 0.00 0.00 4.61
1944 2021 1.229951 AAGCACTCCCTCCATCCCA 60.230 57.895 0.00 0.00 0.00 4.37
1945 2022 1.225704 CAAGCACTCCCTCCATCCC 59.774 63.158 0.00 0.00 0.00 3.85
1946 2023 1.225704 CCAAGCACTCCCTCCATCC 59.774 63.158 0.00 0.00 0.00 3.51
1947 2024 0.329596 AACCAAGCACTCCCTCCATC 59.670 55.000 0.00 0.00 0.00 3.51
1948 2025 0.779997 AAACCAAGCACTCCCTCCAT 59.220 50.000 0.00 0.00 0.00 3.41
1949 2026 0.555769 AAAACCAAGCACTCCCTCCA 59.444 50.000 0.00 0.00 0.00 3.86
1950 2027 0.961753 CAAAACCAAGCACTCCCTCC 59.038 55.000 0.00 0.00 0.00 4.30
1951 2028 1.981256 TCAAAACCAAGCACTCCCTC 58.019 50.000 0.00 0.00 0.00 4.30
1952 2029 2.683211 ATCAAAACCAAGCACTCCCT 57.317 45.000 0.00 0.00 0.00 4.20
1953 2030 2.029020 GGAATCAAAACCAAGCACTCCC 60.029 50.000 0.00 0.00 0.00 4.30
1954 2031 2.893489 AGGAATCAAAACCAAGCACTCC 59.107 45.455 0.00 0.00 0.00 3.85
1955 2032 4.590850 AAGGAATCAAAACCAAGCACTC 57.409 40.909 0.00 0.00 0.00 3.51
1956 2033 5.598417 AGTAAAGGAATCAAAACCAAGCACT 59.402 36.000 0.00 0.00 0.00 4.40
1957 2034 5.842907 AGTAAAGGAATCAAAACCAAGCAC 58.157 37.500 0.00 0.00 0.00 4.40
1958 2035 6.478512 AAGTAAAGGAATCAAAACCAAGCA 57.521 33.333 0.00 0.00 0.00 3.91
1959 2036 8.523658 AGATAAGTAAAGGAATCAAAACCAAGC 58.476 33.333 0.00 0.00 0.00 4.01
1962 2039 9.362151 ACAAGATAAGTAAAGGAATCAAAACCA 57.638 29.630 0.00 0.00 0.00 3.67
2040 2117 4.955811 AATGCGGACATAGGTTGATCTA 57.044 40.909 0.00 0.00 34.62 1.98
2052 2130 0.322098 CACCCCAACTAATGCGGACA 60.322 55.000 0.00 0.00 31.01 4.02
2087 2166 5.630680 AGTCAATGCAGAAAACAATAAAGCG 59.369 36.000 0.00 0.00 0.00 4.68
2139 2218 1.479730 CTGAGCCTCATCAGCAGTACA 59.520 52.381 0.00 0.00 40.26 2.90
2140 2219 2.222007 CTGAGCCTCATCAGCAGTAC 57.778 55.000 0.00 0.00 40.26 2.73
2228 2309 2.431954 AGGGGACAAGAGCATCATTG 57.568 50.000 0.00 0.00 37.82 2.82
2365 2446 7.751732 TGGAAGATGATGATTTTGACTTTACG 58.248 34.615 0.00 0.00 0.00 3.18
2939 3023 4.515567 TGGGCGTATCGATATAGCATCTAG 59.484 45.833 26.21 7.42 0.00 2.43
3039 3123 1.694150 CCCACAACCTTCTGAGAGTCA 59.306 52.381 0.00 0.00 0.00 3.41
3074 3158 6.279513 ACCAAACATTCTGTTGAGAAACAA 57.720 33.333 0.00 0.00 40.14 2.83
3153 3240 9.677567 AGTACAACAATGTAACAATGATTTGAC 57.322 29.630 0.00 0.00 43.41 3.18
3291 3381 2.386661 ATACACCAACAGAGAAGCCG 57.613 50.000 0.00 0.00 0.00 5.52
3427 3520 9.358406 ACCAAATCAATATCATCAGCTTCATTA 57.642 29.630 0.00 0.00 0.00 1.90
3428 3521 8.246430 ACCAAATCAATATCATCAGCTTCATT 57.754 30.769 0.00 0.00 0.00 2.57
3429 3522 7.834881 ACCAAATCAATATCATCAGCTTCAT 57.165 32.000 0.00 0.00 0.00 2.57
3430 3523 8.929260 ATACCAAATCAATATCATCAGCTTCA 57.071 30.769 0.00 0.00 0.00 3.02
3432 3525 9.976511 CAAATACCAAATCAATATCATCAGCTT 57.023 29.630 0.00 0.00 0.00 3.74
3433 3526 9.139734 ACAAATACCAAATCAATATCATCAGCT 57.860 29.630 0.00 0.00 0.00 4.24
3434 3527 9.188588 CACAAATACCAAATCAATATCATCAGC 57.811 33.333 0.00 0.00 0.00 4.26
3435 3528 9.687210 CCACAAATACCAAATCAATATCATCAG 57.313 33.333 0.00 0.00 0.00 2.90
3436 3529 9.418839 TCCACAAATACCAAATCAATATCATCA 57.581 29.630 0.00 0.00 0.00 3.07
3442 3535 9.420118 AGCTTATCCACAAATACCAAATCAATA 57.580 29.630 0.00 0.00 0.00 1.90
3443 3536 8.310122 AGCTTATCCACAAATACCAAATCAAT 57.690 30.769 0.00 0.00 0.00 2.57
3444 3537 7.716799 AGCTTATCCACAAATACCAAATCAA 57.283 32.000 0.00 0.00 0.00 2.57
3445 3538 7.363705 CCAAGCTTATCCACAAATACCAAATCA 60.364 37.037 0.00 0.00 0.00 2.57
3446 3539 6.980397 CCAAGCTTATCCACAAATACCAAATC 59.020 38.462 0.00 0.00 0.00 2.17
3447 3540 6.440328 ACCAAGCTTATCCACAAATACCAAAT 59.560 34.615 0.00 0.00 0.00 2.32
3448 3541 5.777732 ACCAAGCTTATCCACAAATACCAAA 59.222 36.000 0.00 0.00 0.00 3.28
3449 3542 5.329399 ACCAAGCTTATCCACAAATACCAA 58.671 37.500 0.00 0.00 0.00 3.67
3450 3543 4.929479 ACCAAGCTTATCCACAAATACCA 58.071 39.130 0.00 0.00 0.00 3.25
3451 3544 4.947388 TGACCAAGCTTATCCACAAATACC 59.053 41.667 0.00 0.00 0.00 2.73
3452 3545 6.509418 TTGACCAAGCTTATCCACAAATAC 57.491 37.500 0.00 0.00 0.00 1.89
3453 3546 6.491745 TGTTTGACCAAGCTTATCCACAAATA 59.508 34.615 0.00 4.26 0.00 1.40
3454 3547 5.304101 TGTTTGACCAAGCTTATCCACAAAT 59.696 36.000 0.00 0.00 0.00 2.32
3455 3548 4.646945 TGTTTGACCAAGCTTATCCACAAA 59.353 37.500 0.00 5.62 0.00 2.83
3456 3549 4.211125 TGTTTGACCAAGCTTATCCACAA 58.789 39.130 0.00 0.00 0.00 3.33
3457 3550 3.820467 CTGTTTGACCAAGCTTATCCACA 59.180 43.478 0.00 5.43 0.00 4.17
3458 3551 4.072131 TCTGTTTGACCAAGCTTATCCAC 58.928 43.478 0.00 1.02 0.00 4.02
3459 3552 4.041567 TCTCTGTTTGACCAAGCTTATCCA 59.958 41.667 0.00 0.00 0.00 3.41
3460 3553 4.579869 TCTCTGTTTGACCAAGCTTATCC 58.420 43.478 0.00 0.00 0.00 2.59
3461 3554 5.241662 ACTCTCTGTTTGACCAAGCTTATC 58.758 41.667 0.00 0.18 0.00 1.75
3462 3555 5.234466 ACTCTCTGTTTGACCAAGCTTAT 57.766 39.130 0.00 0.00 0.00 1.73
3463 3556 4.689612 ACTCTCTGTTTGACCAAGCTTA 57.310 40.909 0.00 0.00 0.00 3.09
3464 3557 3.567478 ACTCTCTGTTTGACCAAGCTT 57.433 42.857 0.00 0.00 0.00 3.74
3465 3558 3.556004 GCTACTCTCTGTTTGACCAAGCT 60.556 47.826 0.00 0.00 0.00 3.74
3466 3559 2.739379 GCTACTCTCTGTTTGACCAAGC 59.261 50.000 0.00 0.00 0.00 4.01
3467 3560 4.264460 AGCTACTCTCTGTTTGACCAAG 57.736 45.455 0.00 0.00 0.00 3.61
3468 3561 4.100963 TCAAGCTACTCTCTGTTTGACCAA 59.899 41.667 0.00 0.00 30.59 3.67
3469 3562 3.641436 TCAAGCTACTCTCTGTTTGACCA 59.359 43.478 0.00 0.00 30.59 4.02
3470 3563 3.991121 GTCAAGCTACTCTCTGTTTGACC 59.009 47.826 10.19 0.00 43.59 4.02
3471 3564 4.877282 AGTCAAGCTACTCTCTGTTTGAC 58.123 43.478 12.45 12.45 46.97 3.18
3472 3565 5.303078 AGAAGTCAAGCTACTCTCTGTTTGA 59.697 40.000 0.00 0.00 32.53 2.69
3473 3566 5.537188 AGAAGTCAAGCTACTCTCTGTTTG 58.463 41.667 0.00 0.00 0.00 2.93
3474 3567 5.799827 AGAAGTCAAGCTACTCTCTGTTT 57.200 39.130 0.00 0.00 0.00 2.83
3475 3568 6.902771 TTAGAAGTCAAGCTACTCTCTGTT 57.097 37.500 0.00 0.00 0.00 3.16
3476 3569 6.902771 TTTAGAAGTCAAGCTACTCTCTGT 57.097 37.500 0.00 0.00 0.00 3.41
3477 3570 9.515020 CTATTTTAGAAGTCAAGCTACTCTCTG 57.485 37.037 0.00 0.00 0.00 3.35
3478 3571 9.250246 ACTATTTTAGAAGTCAAGCTACTCTCT 57.750 33.333 0.00 0.00 0.00 3.10
3479 3572 9.296400 CACTATTTTAGAAGTCAAGCTACTCTC 57.704 37.037 0.00 0.00 0.00 3.20
3480 3573 9.026121 TCACTATTTTAGAAGTCAAGCTACTCT 57.974 33.333 0.00 0.00 0.00 3.24
3481 3574 9.810545 ATCACTATTTTAGAAGTCAAGCTACTC 57.189 33.333 0.00 0.00 0.00 2.59
3482 3575 9.810545 GATCACTATTTTAGAAGTCAAGCTACT 57.189 33.333 0.00 0.00 0.00 2.57
3483 3576 9.810545 AGATCACTATTTTAGAAGTCAAGCTAC 57.189 33.333 0.00 0.00 0.00 3.58
3498 3591 9.877178 CAAGGTACTCTGTTTAGATCACTATTT 57.123 33.333 0.00 0.00 38.49 1.40
3499 3592 7.982354 GCAAGGTACTCTGTTTAGATCACTATT 59.018 37.037 0.00 0.00 38.49 1.73
3500 3593 7.343316 AGCAAGGTACTCTGTTTAGATCACTAT 59.657 37.037 0.00 0.00 38.49 2.12
3501 3594 6.663953 AGCAAGGTACTCTGTTTAGATCACTA 59.336 38.462 0.00 0.00 38.49 2.74
3502 3595 5.482175 AGCAAGGTACTCTGTTTAGATCACT 59.518 40.000 0.00 0.00 38.49 3.41
3503 3596 5.725362 AGCAAGGTACTCTGTTTAGATCAC 58.275 41.667 0.00 0.00 38.49 3.06
3504 3597 6.127423 GGTAGCAAGGTACTCTGTTTAGATCA 60.127 42.308 9.04 0.00 38.49 2.92
3505 3598 6.127423 TGGTAGCAAGGTACTCTGTTTAGATC 60.127 42.308 9.04 0.00 38.49 2.75
3506 3599 5.720041 TGGTAGCAAGGTACTCTGTTTAGAT 59.280 40.000 9.04 0.00 38.49 1.98
3507 3600 5.081728 TGGTAGCAAGGTACTCTGTTTAGA 58.918 41.667 9.04 0.00 38.49 2.10
3508 3601 5.401531 TGGTAGCAAGGTACTCTGTTTAG 57.598 43.478 9.04 0.00 38.49 1.85
3509 3602 5.811796 TTGGTAGCAAGGTACTCTGTTTA 57.188 39.130 2.54 0.00 38.49 2.01
3510 3603 4.699925 TTGGTAGCAAGGTACTCTGTTT 57.300 40.909 2.54 0.00 38.49 2.83
3511 3604 4.910458 ATTGGTAGCAAGGTACTCTGTT 57.090 40.909 13.51 0.00 38.49 3.16
3512 3605 4.565652 CCAATTGGTAGCAAGGTACTCTGT 60.566 45.833 16.90 0.00 38.49 3.41
3513 3606 3.941483 CCAATTGGTAGCAAGGTACTCTG 59.059 47.826 16.90 2.19 38.49 3.35
3514 3607 3.622455 GCCAATTGGTAGCAAGGTACTCT 60.622 47.826 25.19 0.00 35.47 3.24
3515 3608 2.683362 GCCAATTGGTAGCAAGGTACTC 59.317 50.000 25.19 0.32 35.47 2.59
3516 3609 2.041081 TGCCAATTGGTAGCAAGGTACT 59.959 45.455 25.19 0.00 37.81 2.73
3517 3610 2.423538 CTGCCAATTGGTAGCAAGGTAC 59.576 50.000 26.79 7.01 40.92 3.34
3518 3611 2.722094 CTGCCAATTGGTAGCAAGGTA 58.278 47.619 26.79 8.31 40.92 3.08
3519 3612 1.549203 CTGCCAATTGGTAGCAAGGT 58.451 50.000 26.79 0.69 40.92 3.50
3526 3619 4.912586 TGTACTAAAGCTGCCAATTGGTA 58.087 39.130 25.19 20.24 37.57 3.25
3527 3620 3.761897 TGTACTAAAGCTGCCAATTGGT 58.238 40.909 25.19 7.28 37.57 3.67
3528 3621 4.485163 GTTGTACTAAAGCTGCCAATTGG 58.515 43.478 20.81 20.81 38.53 3.16
3529 3622 4.218417 AGGTTGTACTAAAGCTGCCAATTG 59.782 41.667 0.00 0.00 36.56 2.32
3530 3623 4.218417 CAGGTTGTACTAAAGCTGCCAATT 59.782 41.667 10.95 0.00 45.53 2.32
3531 3624 3.758554 CAGGTTGTACTAAAGCTGCCAAT 59.241 43.478 10.95 0.00 45.53 3.16
3532 3625 3.146066 CAGGTTGTACTAAAGCTGCCAA 58.854 45.455 10.95 0.00 45.53 4.52
3533 3626 2.778299 CAGGTTGTACTAAAGCTGCCA 58.222 47.619 10.95 0.00 45.53 4.92
3537 3630 3.515901 CTCCCTCAGGTTGTACTAAAGCT 59.484 47.826 0.00 0.00 38.39 3.74
3538 3631 3.261137 ACTCCCTCAGGTTGTACTAAAGC 59.739 47.826 0.00 0.00 0.00 3.51
3539 3632 5.715753 AGTACTCCCTCAGGTTGTACTAAAG 59.284 44.000 19.00 0.00 44.54 1.85
3540 3633 5.479375 CAGTACTCCCTCAGGTTGTACTAAA 59.521 44.000 19.63 0.00 44.55 1.85
3541 3634 5.014858 CAGTACTCCCTCAGGTTGTACTAA 58.985 45.833 19.63 0.00 44.55 2.24
3542 3635 4.597004 CAGTACTCCCTCAGGTTGTACTA 58.403 47.826 19.63 0.00 44.55 1.82
3543 3636 3.432378 CAGTACTCCCTCAGGTTGTACT 58.568 50.000 16.20 16.20 45.82 2.73
3544 3637 2.094130 GCAGTACTCCCTCAGGTTGTAC 60.094 54.545 12.99 12.99 40.79 2.90
3545 3638 2.176889 GCAGTACTCCCTCAGGTTGTA 58.823 52.381 0.00 0.00 0.00 2.41
3546 3639 0.977395 GCAGTACTCCCTCAGGTTGT 59.023 55.000 0.00 0.00 0.00 3.32
3547 3640 0.976641 TGCAGTACTCCCTCAGGTTG 59.023 55.000 0.00 0.00 0.00 3.77
3548 3641 1.729586 TTGCAGTACTCCCTCAGGTT 58.270 50.000 0.00 0.00 0.00 3.50
3549 3642 1.729586 TTTGCAGTACTCCCTCAGGT 58.270 50.000 0.00 0.00 0.00 4.00
3550 3643 3.356529 AATTTGCAGTACTCCCTCAGG 57.643 47.619 0.00 0.00 0.00 3.86
3551 3644 5.123979 GGTAAAATTTGCAGTACTCCCTCAG 59.876 44.000 0.00 0.00 0.00 3.35
3552 3645 5.007682 GGTAAAATTTGCAGTACTCCCTCA 58.992 41.667 0.00 0.00 0.00 3.86
3553 3646 5.254115 AGGTAAAATTTGCAGTACTCCCTC 58.746 41.667 0.00 0.00 0.00 4.30
3554 3647 5.256806 AGGTAAAATTTGCAGTACTCCCT 57.743 39.130 0.00 0.00 0.00 4.20
3555 3648 5.977489 AAGGTAAAATTTGCAGTACTCCC 57.023 39.130 0.00 0.00 0.00 4.30
3556 3649 6.387465 GGAAAGGTAAAATTTGCAGTACTCC 58.613 40.000 0.00 0.00 0.00 3.85
3557 3650 6.387465 GGGAAAGGTAAAATTTGCAGTACTC 58.613 40.000 0.00 0.00 30.37 2.59
3558 3651 5.048294 CGGGAAAGGTAAAATTTGCAGTACT 60.048 40.000 0.00 0.00 30.37 2.73
3559 3652 5.158494 CGGGAAAGGTAAAATTTGCAGTAC 58.842 41.667 0.00 0.00 30.37 2.73
3560 3653 4.218852 CCGGGAAAGGTAAAATTTGCAGTA 59.781 41.667 0.00 0.00 30.37 2.74
3561 3654 3.006430 CCGGGAAAGGTAAAATTTGCAGT 59.994 43.478 0.00 0.00 30.37 4.40
3562 3655 3.584834 CCGGGAAAGGTAAAATTTGCAG 58.415 45.455 0.00 0.00 30.37 4.41
3563 3656 2.300437 CCCGGGAAAGGTAAAATTTGCA 59.700 45.455 18.48 0.00 30.37 4.08
3564 3657 2.300723 ACCCGGGAAAGGTAAAATTTGC 59.699 45.455 32.02 0.00 35.24 3.68
3565 3658 3.322541 ACACCCGGGAAAGGTAAAATTTG 59.677 43.478 32.02 12.79 35.24 2.32
3566 3659 3.578978 ACACCCGGGAAAGGTAAAATTT 58.421 40.909 32.02 0.00 35.24 1.82
3567 3660 3.247948 ACACCCGGGAAAGGTAAAATT 57.752 42.857 32.02 0.00 35.24 1.82
3568 3661 2.984435 ACACCCGGGAAAGGTAAAAT 57.016 45.000 32.02 0.00 35.24 1.82
3569 3662 2.091994 TGAACACCCGGGAAAGGTAAAA 60.092 45.455 32.02 6.04 35.24 1.52
3570 3663 1.493871 TGAACACCCGGGAAAGGTAAA 59.506 47.619 32.02 8.44 35.24 2.01
3571 3664 1.138568 TGAACACCCGGGAAAGGTAA 58.861 50.000 32.02 5.25 35.24 2.85
3572 3665 1.138568 TTGAACACCCGGGAAAGGTA 58.861 50.000 32.02 5.67 35.24 3.08
3573 3666 0.481128 ATTGAACACCCGGGAAAGGT 59.519 50.000 32.02 15.88 38.48 3.50
3574 3667 1.173913 GATTGAACACCCGGGAAAGG 58.826 55.000 32.02 15.98 0.00 3.11
3575 3668 2.200373 AGATTGAACACCCGGGAAAG 57.800 50.000 32.02 19.07 0.00 2.62
3576 3669 2.668144 AAGATTGAACACCCGGGAAA 57.332 45.000 32.02 13.42 0.00 3.13
3577 3670 2.668144 AAAGATTGAACACCCGGGAA 57.332 45.000 32.02 11.48 0.00 3.97
3578 3671 2.026636 CCTAAAGATTGAACACCCGGGA 60.027 50.000 32.02 2.68 0.00 5.14
3579 3672 2.365582 CCTAAAGATTGAACACCCGGG 58.634 52.381 22.25 22.25 0.00 5.73
3580 3673 1.743394 GCCTAAAGATTGAACACCCGG 59.257 52.381 0.00 0.00 0.00 5.73
3581 3674 1.743394 GGCCTAAAGATTGAACACCCG 59.257 52.381 0.00 0.00 0.00 5.28
3582 3675 3.017442 GAGGCCTAAAGATTGAACACCC 58.983 50.000 4.42 0.00 0.00 4.61
3583 3676 3.686016 TGAGGCCTAAAGATTGAACACC 58.314 45.455 4.42 0.00 0.00 4.16
3584 3677 5.447818 CGAATGAGGCCTAAAGATTGAACAC 60.448 44.000 4.42 0.00 0.00 3.32
3585 3678 4.635765 CGAATGAGGCCTAAAGATTGAACA 59.364 41.667 4.42 0.00 0.00 3.18
3586 3679 4.035675 CCGAATGAGGCCTAAAGATTGAAC 59.964 45.833 4.42 0.00 0.00 3.18
3587 3680 4.199310 CCGAATGAGGCCTAAAGATTGAA 58.801 43.478 4.42 0.00 0.00 2.69
3588 3681 3.199946 ACCGAATGAGGCCTAAAGATTGA 59.800 43.478 4.42 0.00 33.69 2.57
3589 3682 3.545703 ACCGAATGAGGCCTAAAGATTG 58.454 45.455 4.42 0.00 33.69 2.67
3590 3683 3.933861 ACCGAATGAGGCCTAAAGATT 57.066 42.857 4.42 1.32 33.69 2.40
3591 3684 3.933861 AACCGAATGAGGCCTAAAGAT 57.066 42.857 4.42 0.00 33.69 2.40
3592 3685 4.383770 CCTTAACCGAATGAGGCCTAAAGA 60.384 45.833 4.42 0.00 33.69 2.52
3593 3686 3.877508 CCTTAACCGAATGAGGCCTAAAG 59.122 47.826 4.42 0.00 33.69 1.85
3594 3687 3.371166 CCCTTAACCGAATGAGGCCTAAA 60.371 47.826 4.42 0.00 33.69 1.85
3595 3688 2.171870 CCCTTAACCGAATGAGGCCTAA 59.828 50.000 4.42 0.00 33.69 2.69
3596 3689 1.766496 CCCTTAACCGAATGAGGCCTA 59.234 52.381 4.42 0.00 33.69 3.93
3597 3690 0.546598 CCCTTAACCGAATGAGGCCT 59.453 55.000 3.86 3.86 33.69 5.19
3598 3691 0.465642 CCCCTTAACCGAATGAGGCC 60.466 60.000 0.00 0.00 33.69 5.19
3599 3692 0.465642 CCCCCTTAACCGAATGAGGC 60.466 60.000 0.00 0.00 33.69 4.70
3600 3693 1.209621 TCCCCCTTAACCGAATGAGG 58.790 55.000 0.00 0.00 37.30 3.86
3601 3694 2.640184 GTTCCCCCTTAACCGAATGAG 58.360 52.381 0.00 0.00 0.00 2.90
3602 3695 1.282738 GGTTCCCCCTTAACCGAATGA 59.717 52.381 0.00 0.00 37.26 2.57
3603 3696 1.758936 GGTTCCCCCTTAACCGAATG 58.241 55.000 0.00 0.00 37.26 2.67
3615 3708 2.984435 TTCTTAGGTTTGGGTTCCCC 57.016 50.000 5.34 0.00 45.71 4.81
3616 3709 4.954202 CCTAATTCTTAGGTTTGGGTTCCC 59.046 45.833 0.12 0.12 46.26 3.97
3646 3739 8.139989 GCAAGTGCCATCTTATCAAATTTCTAT 58.860 33.333 0.00 0.00 34.31 1.98
3647 3740 7.483307 GCAAGTGCCATCTTATCAAATTTCTA 58.517 34.615 0.00 0.00 34.31 2.10
3648 3741 6.335777 GCAAGTGCCATCTTATCAAATTTCT 58.664 36.000 0.00 0.00 34.31 2.52
3649 3742 6.579491 GCAAGTGCCATCTTATCAAATTTC 57.421 37.500 0.00 0.00 34.31 2.17
3665 3758 4.082026 ACAATTCCTTAGAATGGCAAGTGC 60.082 41.667 0.00 0.00 42.03 4.40
3666 3759 5.416952 AGACAATTCCTTAGAATGGCAAGTG 59.583 40.000 0.00 0.00 42.03 3.16
3667 3760 5.574188 AGACAATTCCTTAGAATGGCAAGT 58.426 37.500 0.00 0.00 42.03 3.16
3668 3761 6.521151 AAGACAATTCCTTAGAATGGCAAG 57.479 37.500 0.00 0.00 42.03 4.01
3669 3762 6.267471 ACAAAGACAATTCCTTAGAATGGCAA 59.733 34.615 0.00 0.00 42.03 4.52
3670 3763 5.774690 ACAAAGACAATTCCTTAGAATGGCA 59.225 36.000 0.00 0.00 42.03 4.92
3671 3764 6.272822 ACAAAGACAATTCCTTAGAATGGC 57.727 37.500 0.00 0.00 42.03 4.40
3672 3765 9.793252 CAATACAAAGACAATTCCTTAGAATGG 57.207 33.333 0.00 0.00 42.03 3.16
3676 3769 9.010029 GGAACAATACAAAGACAATTCCTTAGA 57.990 33.333 0.00 0.00 33.14 2.10
3677 3770 9.014297 AGGAACAATACAAAGACAATTCCTTAG 57.986 33.333 0.00 0.00 41.47 2.18
3678 3771 8.934023 AGGAACAATACAAAGACAATTCCTTA 57.066 30.769 0.00 0.00 41.47 2.69
3679 3772 7.839680 AGGAACAATACAAAGACAATTCCTT 57.160 32.000 0.00 0.00 41.47 3.36
3680 3773 7.119262 CGTAGGAACAATACAAAGACAATTCCT 59.881 37.037 7.32 7.32 45.16 3.36
3681 3774 7.241376 CGTAGGAACAATACAAAGACAATTCC 58.759 38.462 0.00 0.00 35.60 3.01
3682 3775 6.741358 GCGTAGGAACAATACAAAGACAATTC 59.259 38.462 0.00 0.00 0.00 2.17
3683 3776 6.205853 TGCGTAGGAACAATACAAAGACAATT 59.794 34.615 0.00 0.00 0.00 2.32
3684 3777 5.703592 TGCGTAGGAACAATACAAAGACAAT 59.296 36.000 0.00 0.00 0.00 2.71
3685 3778 5.057819 TGCGTAGGAACAATACAAAGACAA 58.942 37.500 0.00 0.00 0.00 3.18
3686 3779 4.633175 TGCGTAGGAACAATACAAAGACA 58.367 39.130 0.00 0.00 0.00 3.41
3687 3780 5.600908 TTGCGTAGGAACAATACAAAGAC 57.399 39.130 0.00 0.00 28.51 3.01
3688 3781 6.621316 TTTTGCGTAGGAACAATACAAAGA 57.379 33.333 0.00 0.00 37.77 2.52
3689 3782 7.867445 ATTTTTGCGTAGGAACAATACAAAG 57.133 32.000 0.00 0.00 36.51 2.77
3690 3783 9.400638 CTTATTTTTGCGTAGGAACAATACAAA 57.599 29.630 0.00 0.00 39.48 2.83
3691 3784 7.539366 GCTTATTTTTGCGTAGGAACAATACAA 59.461 33.333 0.00 0.00 39.48 2.41
3692 3785 7.024768 GCTTATTTTTGCGTAGGAACAATACA 58.975 34.615 0.00 0.00 39.48 2.29
3693 3786 7.248437 AGCTTATTTTTGCGTAGGAACAATAC 58.752 34.615 0.00 0.00 39.48 1.89
3694 3787 7.385778 AGCTTATTTTTGCGTAGGAACAATA 57.614 32.000 0.00 0.00 38.96 1.90
3695 3788 6.267496 AGCTTATTTTTGCGTAGGAACAAT 57.733 33.333 0.00 0.00 40.98 2.71
3696 3789 5.699097 AGCTTATTTTTGCGTAGGAACAA 57.301 34.783 0.00 0.00 37.77 2.83
3697 3790 5.699097 AAGCTTATTTTTGCGTAGGAACA 57.301 34.783 0.00 0.00 37.77 3.18
3698 3791 6.146898 TCAAAGCTTATTTTTGCGTAGGAAC 58.853 36.000 0.00 0.00 37.77 3.62
3699 3792 6.016610 ACTCAAAGCTTATTTTTGCGTAGGAA 60.017 34.615 0.00 0.00 33.23 3.36
3700 3793 5.472137 ACTCAAAGCTTATTTTTGCGTAGGA 59.528 36.000 0.00 0.00 33.23 2.94
3701 3794 5.569059 CACTCAAAGCTTATTTTTGCGTAGG 59.431 40.000 0.00 0.00 33.23 3.18
3702 3795 6.370593 TCACTCAAAGCTTATTTTTGCGTAG 58.629 36.000 0.00 0.00 33.23 3.51
3703 3796 6.307031 TCACTCAAAGCTTATTTTTGCGTA 57.693 33.333 0.00 0.00 33.23 4.42
3704 3797 5.181690 TCACTCAAAGCTTATTTTTGCGT 57.818 34.783 0.00 0.00 34.75 5.24
3705 3798 5.117592 CCTTCACTCAAAGCTTATTTTTGCG 59.882 40.000 0.00 0.00 35.90 4.85
3706 3799 5.985530 ACCTTCACTCAAAGCTTATTTTTGC 59.014 36.000 0.00 0.00 35.90 3.68
3707 3800 6.980397 ACACCTTCACTCAAAGCTTATTTTTG 59.020 34.615 0.00 0.00 36.98 2.44
3708 3801 7.112452 ACACCTTCACTCAAAGCTTATTTTT 57.888 32.000 0.00 0.00 0.00 1.94
3709 3802 6.715347 ACACCTTCACTCAAAGCTTATTTT 57.285 33.333 0.00 0.00 0.00 1.82
3710 3803 7.224297 TCTACACCTTCACTCAAAGCTTATTT 58.776 34.615 0.00 0.00 0.00 1.40
3711 3804 6.769512 TCTACACCTTCACTCAAAGCTTATT 58.230 36.000 0.00 0.00 0.00 1.40
3712 3805 6.360370 TCTACACCTTCACTCAAAGCTTAT 57.640 37.500 0.00 0.00 0.00 1.73
3713 3806 5.801531 TCTACACCTTCACTCAAAGCTTA 57.198 39.130 0.00 0.00 0.00 3.09
3714 3807 4.689612 TCTACACCTTCACTCAAAGCTT 57.310 40.909 0.00 0.00 0.00 3.74
3715 3808 4.899352 ATCTACACCTTCACTCAAAGCT 57.101 40.909 0.00 0.00 0.00 3.74
3716 3809 4.393371 GGAATCTACACCTTCACTCAAAGC 59.607 45.833 0.00 0.00 0.00 3.51
3717 3810 5.799213 AGGAATCTACACCTTCACTCAAAG 58.201 41.667 0.00 0.00 31.95 2.77
3718 3811 5.825593 AGGAATCTACACCTTCACTCAAA 57.174 39.130 0.00 0.00 31.95 2.69
3719 3812 5.825593 AAGGAATCTACACCTTCACTCAA 57.174 39.130 0.00 0.00 41.95 3.02
3727 3820 6.126409 TGTGTTTTTGAAGGAATCTACACCT 58.874 36.000 0.00 0.00 38.23 4.00
3728 3821 6.385649 TGTGTTTTTGAAGGAATCTACACC 57.614 37.500 0.00 0.00 0.00 4.16
3729 3822 8.696410 TTTTGTGTTTTTGAAGGAATCTACAC 57.304 30.769 0.00 0.00 0.00 2.90
3768 3861 9.124807 GGAAAATTTGTACAGGAATTTCGTAAG 57.875 33.333 15.31 0.00 35.14 2.34
3769 3862 8.852135 AGGAAAATTTGTACAGGAATTTCGTAA 58.148 29.630 15.31 0.00 35.14 3.18
3770 3863 8.398878 AGGAAAATTTGTACAGGAATTTCGTA 57.601 30.769 15.31 0.00 35.14 3.43
3771 3864 7.230712 AGAGGAAAATTTGTACAGGAATTTCGT 59.769 33.333 15.31 15.00 35.14 3.85
3772 3865 7.593825 AGAGGAAAATTTGTACAGGAATTTCG 58.406 34.615 15.31 0.00 35.14 3.46
3814 3907 8.590204 GGTTTGGAGGATTTTAATAGGAAAACA 58.410 33.333 0.00 0.00 31.35 2.83
3815 3908 7.758076 CGGTTTGGAGGATTTTAATAGGAAAAC 59.242 37.037 0.00 0.00 31.35 2.43
3816 3909 7.093684 CCGGTTTGGAGGATTTTAATAGGAAAA 60.094 37.037 0.00 0.00 42.00 2.29
3817 3910 6.378848 CCGGTTTGGAGGATTTTAATAGGAAA 59.621 38.462 0.00 0.00 42.00 3.13
3818 3911 5.889289 CCGGTTTGGAGGATTTTAATAGGAA 59.111 40.000 0.00 0.00 42.00 3.36
3819 3912 5.192121 TCCGGTTTGGAGGATTTTAATAGGA 59.808 40.000 0.00 0.00 43.74 2.94
3820 3913 5.442391 TCCGGTTTGGAGGATTTTAATAGG 58.558 41.667 0.00 0.00 43.74 2.57
3834 3927 2.122783 TAAGGCTTCATCCGGTTTGG 57.877 50.000 1.30 0.00 40.09 3.28
3835 3928 4.217550 TCTTTTAAGGCTTCATCCGGTTTG 59.782 41.667 1.30 0.36 0.00 2.93
3836 3929 4.217767 GTCTTTTAAGGCTTCATCCGGTTT 59.782 41.667 1.30 0.00 0.00 3.27
3837 3930 3.756963 GTCTTTTAAGGCTTCATCCGGTT 59.243 43.478 1.30 0.00 0.00 4.44
3838 3931 3.344515 GTCTTTTAAGGCTTCATCCGGT 58.655 45.455 1.30 0.00 0.00 5.28
3839 3932 2.683362 GGTCTTTTAAGGCTTCATCCGG 59.317 50.000 1.30 0.00 0.00 5.14
3840 3933 3.343617 TGGTCTTTTAAGGCTTCATCCG 58.656 45.455 1.30 0.00 0.00 4.18
3841 3934 3.696548 CCTGGTCTTTTAAGGCTTCATCC 59.303 47.826 1.30 0.12 0.00 3.51
3842 3935 4.156739 CACCTGGTCTTTTAAGGCTTCATC 59.843 45.833 1.30 0.00 34.18 2.92
3843 3936 4.082125 CACCTGGTCTTTTAAGGCTTCAT 58.918 43.478 1.30 0.00 34.18 2.57
3844 3937 3.137544 TCACCTGGTCTTTTAAGGCTTCA 59.862 43.478 1.30 0.00 34.18 3.02
3845 3938 3.751518 TCACCTGGTCTTTTAAGGCTTC 58.248 45.455 1.30 0.00 34.18 3.86
3846 3939 3.876309 TCACCTGGTCTTTTAAGGCTT 57.124 42.857 4.58 4.58 34.18 4.35
3847 3940 3.498661 CCTTCACCTGGTCTTTTAAGGCT 60.499 47.826 0.00 0.00 34.18 4.58
3848 3941 2.820197 CCTTCACCTGGTCTTTTAAGGC 59.180 50.000 0.00 0.00 34.18 4.35
3849 3942 4.367039 TCCTTCACCTGGTCTTTTAAGG 57.633 45.455 0.00 5.81 37.11 2.69
3850 3943 6.265422 ACAAATCCTTCACCTGGTCTTTTAAG 59.735 38.462 0.00 0.00 0.00 1.85
3851 3944 6.133356 ACAAATCCTTCACCTGGTCTTTTAA 58.867 36.000 0.00 0.00 0.00 1.52
3852 3945 5.701224 ACAAATCCTTCACCTGGTCTTTTA 58.299 37.500 0.00 0.00 0.00 1.52
3853 3946 4.546674 ACAAATCCTTCACCTGGTCTTTT 58.453 39.130 0.00 0.00 0.00 2.27
3854 3947 4.184649 ACAAATCCTTCACCTGGTCTTT 57.815 40.909 0.00 0.00 0.00 2.52
3855 3948 3.884037 ACAAATCCTTCACCTGGTCTT 57.116 42.857 0.00 0.00 0.00 3.01
3856 3949 4.652822 GTTACAAATCCTTCACCTGGTCT 58.347 43.478 0.00 0.00 0.00 3.85
3857 3950 3.435671 CGTTACAAATCCTTCACCTGGTC 59.564 47.826 0.00 0.00 0.00 4.02
3858 3951 3.408634 CGTTACAAATCCTTCACCTGGT 58.591 45.455 0.00 0.00 0.00 4.00
3859 3952 2.161609 GCGTTACAAATCCTTCACCTGG 59.838 50.000 0.00 0.00 0.00 4.45
3860 3953 2.161609 GGCGTTACAAATCCTTCACCTG 59.838 50.000 0.00 0.00 0.00 4.00
3861 3954 2.039879 AGGCGTTACAAATCCTTCACCT 59.960 45.455 0.00 0.00 0.00 4.00
3862 3955 2.433436 AGGCGTTACAAATCCTTCACC 58.567 47.619 0.00 0.00 0.00 4.02
3866 3959 5.161943 AGTAGAAGGCGTTACAAATCCTT 57.838 39.130 0.00 0.00 41.27 3.36
3867 3960 4.820894 AGTAGAAGGCGTTACAAATCCT 57.179 40.909 0.00 0.00 0.00 3.24
3868 3961 6.104665 AGTAAGTAGAAGGCGTTACAAATCC 58.895 40.000 0.00 0.00 0.00 3.01
3869 3962 6.255237 GGAGTAAGTAGAAGGCGTTACAAATC 59.745 42.308 0.00 0.00 0.00 2.17
3870 3963 6.104665 GGAGTAAGTAGAAGGCGTTACAAAT 58.895 40.000 0.00 0.00 0.00 2.32
3871 3964 5.473039 GGAGTAAGTAGAAGGCGTTACAAA 58.527 41.667 0.00 0.00 0.00 2.83
3872 3965 4.082026 GGGAGTAAGTAGAAGGCGTTACAA 60.082 45.833 0.00 0.00 0.00 2.41
3873 3966 3.445096 GGGAGTAAGTAGAAGGCGTTACA 59.555 47.826 0.00 0.00 0.00 2.41
3874 3967 3.698539 AGGGAGTAAGTAGAAGGCGTTAC 59.301 47.826 0.00 0.00 0.00 2.50
3875 3968 3.973425 AGGGAGTAAGTAGAAGGCGTTA 58.027 45.455 0.00 0.00 0.00 3.18
3876 3969 2.817665 AGGGAGTAAGTAGAAGGCGTT 58.182 47.619 0.00 0.00 0.00 4.84
3877 3970 2.528673 AGGGAGTAAGTAGAAGGCGT 57.471 50.000 0.00 0.00 0.00 5.68
3878 3971 2.223525 CGAAGGGAGTAAGTAGAAGGCG 60.224 54.545 0.00 0.00 0.00 5.52
3879 3972 3.022406 TCGAAGGGAGTAAGTAGAAGGC 58.978 50.000 0.00 0.00 0.00 4.35
3880 3973 5.134661 AGATCGAAGGGAGTAAGTAGAAGG 58.865 45.833 0.00 0.00 0.00 3.46
3881 3974 7.989416 ATAGATCGAAGGGAGTAAGTAGAAG 57.011 40.000 0.00 0.00 0.00 2.85
3890 3983 8.244802 CGACAATTAATATAGATCGAAGGGAGT 58.755 37.037 0.00 0.00 0.00 3.85
3891 3984 8.244802 ACGACAATTAATATAGATCGAAGGGAG 58.755 37.037 11.39 0.00 32.63 4.30
3892 3985 8.118976 ACGACAATTAATATAGATCGAAGGGA 57.881 34.615 11.39 0.00 32.63 4.20
3893 3986 8.758633 AACGACAATTAATATAGATCGAAGGG 57.241 34.615 11.39 0.00 32.63 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.