Multiple sequence alignment - TraesCS2D01G336000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G336000 chr2D 100.000 2495 0 0 1 2495 429375688 429373194 0.000000e+00 4608.0
1 TraesCS2D01G336000 chr2D 80.063 316 35 9 4 291 385157663 385157348 2.510000e-50 209.0
2 TraesCS2D01G336000 chr2A 90.372 1236 74 21 649 1850 558480562 558481786 0.000000e+00 1581.0
3 TraesCS2D01G336000 chr2A 84.795 171 24 2 152 321 139842731 139842900 1.190000e-38 171.0
4 TraesCS2D01G336000 chr2B 93.703 794 38 10 750 1542 506337701 506336919 0.000000e+00 1179.0
5 TraesCS2D01G336000 chr2B 81.818 473 54 17 1647 2116 506336750 506336307 3.920000e-98 368.0
6 TraesCS2D01G336000 chr2B 81.973 294 25 10 4 292 131839263 131839533 8.980000e-55 224.0
7 TraesCS2D01G336000 chr2B 87.701 187 21 2 139 324 777066976 777066791 1.500000e-52 217.0
8 TraesCS2D01G336000 chr6D 89.888 178 14 3 149 324 456115515 456115340 2.500000e-55 226.0
9 TraesCS2D01G336000 chr6D 87.943 141 14 2 4 141 246966636 246966776 1.990000e-36 163.0
10 TraesCS2D01G336000 chr5D 90.230 174 15 2 139 311 551245447 551245619 2.500000e-55 226.0
11 TraesCS2D01G336000 chr5D 89.655 174 16 2 139 311 515570062 515570234 1.160000e-53 220.0
12 TraesCS2D01G336000 chr5D 79.573 328 47 11 139 461 370308236 370308548 1.500000e-52 217.0
13 TraesCS2D01G336000 chr5D 89.362 141 12 2 4 141 551245256 551245396 9.170000e-40 174.0
14 TraesCS2D01G336000 chr1B 91.304 161 13 1 165 324 57068590 57068430 4.180000e-53 219.0
15 TraesCS2D01G336000 chr1B 92.000 125 10 0 4 128 57068790 57068666 2.550000e-40 176.0
16 TraesCS2D01G336000 chr1B 91.200 125 11 0 4 128 57043553 57043429 1.190000e-38 171.0
17 TraesCS2D01G336000 chrUn 88.095 168 16 4 146 311 93027444 93027609 1.960000e-46 196.0
18 TraesCS2D01G336000 chrUn 87.755 49 3 3 2396 2441 31194980 31194932 1.000000e-03 54.7
19 TraesCS2D01G336000 chr4D 84.492 187 25 3 139 324 126893800 126893983 5.480000e-42 182.0
20 TraesCS2D01G336000 chr3D 89.362 141 12 2 4 141 312305567 312305427 9.170000e-40 174.0
21 TraesCS2D01G336000 chr3D 88.028 142 12 5 4 141 407529351 407529211 1.990000e-36 163.0
22 TraesCS2D01G336000 chr3D 77.869 122 25 2 2373 2493 74329483 74329363 9.570000e-10 75.0
23 TraesCS2D01G336000 chr1D 90.551 127 12 0 4 130 480795208 480795082 4.270000e-38 169.0
24 TraesCS2D01G336000 chr6A 80.851 141 17 9 2357 2493 109118200 109118334 4.390000e-18 102.0
25 TraesCS2D01G336000 chr6A 92.105 38 2 1 2387 2423 586551139 586551102 4.000000e-03 52.8
26 TraesCS2D01G336000 chr7D 94.444 36 2 0 2396 2431 3725736 3725701 3.470000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G336000 chr2D 429373194 429375688 2494 True 4608.0 4608 100.0000 1 2495 1 chr2D.!!$R2 2494
1 TraesCS2D01G336000 chr2A 558480562 558481786 1224 False 1581.0 1581 90.3720 649 1850 1 chr2A.!!$F2 1201
2 TraesCS2D01G336000 chr2B 506336307 506337701 1394 True 773.5 1179 87.7605 750 2116 2 chr2B.!!$R2 1366

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
456 457 0.036483 TGCGGCTGCTGTTGAAGATA 60.036 50.0 20.27 0.0 43.34 1.98 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2046 2150 0.032615 ACGAGAGAGAAGGGGCAGAT 60.033 55.0 0.0 0.0 0.0 2.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.746277 AATCTCCCGCGTTGGCAC 60.746 61.111 4.92 0.00 39.92 5.01
26 27 2.968156 CGTTGGCACGTTCGGGAA 60.968 61.111 0.00 0.00 41.84 3.97
27 28 2.943653 GTTGGCACGTTCGGGAAG 59.056 61.111 0.00 0.00 0.00 3.46
28 29 1.890510 GTTGGCACGTTCGGGAAGT 60.891 57.895 0.00 0.00 0.00 3.01
29 30 1.153127 TTGGCACGTTCGGGAAGTT 60.153 52.632 0.00 0.00 0.00 2.66
30 31 1.161563 TTGGCACGTTCGGGAAGTTC 61.162 55.000 0.00 0.00 0.00 3.01
31 32 1.595929 GGCACGTTCGGGAAGTTCA 60.596 57.895 5.01 0.00 0.00 3.18
32 33 0.953960 GGCACGTTCGGGAAGTTCAT 60.954 55.000 5.01 0.00 0.00 2.57
33 34 0.165944 GCACGTTCGGGAAGTTCATG 59.834 55.000 5.01 0.00 0.00 3.07
34 35 1.508632 CACGTTCGGGAAGTTCATGT 58.491 50.000 5.01 0.00 0.00 3.21
35 36 1.459592 CACGTTCGGGAAGTTCATGTC 59.540 52.381 5.01 0.00 0.00 3.06
36 37 1.076332 CGTTCGGGAAGTTCATGTCC 58.924 55.000 5.01 0.00 0.00 4.02
40 41 3.154589 GGGAAGTTCATGTCCCGAC 57.845 57.895 5.01 0.00 44.15 4.79
41 42 0.739813 GGGAAGTTCATGTCCCGACG 60.740 60.000 5.01 0.00 44.15 5.12
42 43 0.245539 GGAAGTTCATGTCCCGACGA 59.754 55.000 5.01 0.00 0.00 4.20
43 44 1.630148 GAAGTTCATGTCCCGACGAG 58.370 55.000 0.00 0.00 0.00 4.18
44 45 1.201647 GAAGTTCATGTCCCGACGAGA 59.798 52.381 0.00 0.00 0.00 4.04
45 46 0.526662 AGTTCATGTCCCGACGAGAC 59.473 55.000 2.09 2.09 34.72 3.36
46 47 0.458025 GTTCATGTCCCGACGAGACC 60.458 60.000 7.07 0.00 33.09 3.85
47 48 1.929806 TTCATGTCCCGACGAGACCG 61.930 60.000 7.07 0.00 42.50 4.79
48 49 3.823330 ATGTCCCGACGAGACCGC 61.823 66.667 7.07 0.00 39.95 5.68
104 105 4.351938 CTCGTGGGCGGTGTCGAA 62.352 66.667 0.00 0.00 39.00 3.71
105 106 4.351938 TCGTGGGCGGTGTCGAAG 62.352 66.667 0.00 0.00 39.00 3.79
107 108 4.309950 GTGGGCGGTGTCGAAGGT 62.310 66.667 0.00 0.00 39.00 3.50
108 109 4.308458 TGGGCGGTGTCGAAGGTG 62.308 66.667 0.00 0.00 39.00 4.00
110 111 4.681978 GGCGGTGTCGAAGGTGCT 62.682 66.667 0.00 0.00 39.00 4.40
111 112 3.414700 GCGGTGTCGAAGGTGCTG 61.415 66.667 0.00 0.00 39.00 4.41
112 113 2.338620 CGGTGTCGAAGGTGCTGA 59.661 61.111 0.00 0.00 39.00 4.26
113 114 1.734477 CGGTGTCGAAGGTGCTGAG 60.734 63.158 0.00 0.00 39.00 3.35
114 115 1.374758 GGTGTCGAAGGTGCTGAGG 60.375 63.158 0.00 0.00 0.00 3.86
115 116 2.029844 GTGTCGAAGGTGCTGAGGC 61.030 63.158 0.00 0.00 39.26 4.70
116 117 2.435059 GTCGAAGGTGCTGAGGCC 60.435 66.667 0.00 0.00 37.74 5.19
117 118 4.069232 TCGAAGGTGCTGAGGCCG 62.069 66.667 0.00 0.00 37.74 6.13
118 119 4.069232 CGAAGGTGCTGAGGCCGA 62.069 66.667 0.00 0.00 37.74 5.54
119 120 2.125350 GAAGGTGCTGAGGCCGAG 60.125 66.667 0.00 0.00 37.74 4.63
120 121 3.672295 GAAGGTGCTGAGGCCGAGG 62.672 68.421 0.00 0.00 37.74 4.63
133 134 3.554692 CGAGGCGCATGTCGGAAC 61.555 66.667 10.83 0.00 38.94 3.62
197 198 4.415332 GTTGACGGCGAGGCGAGA 62.415 66.667 25.16 8.22 0.00 4.04
198 199 3.676605 TTGACGGCGAGGCGAGAA 61.677 61.111 25.16 13.46 0.00 2.87
199 200 3.215597 TTGACGGCGAGGCGAGAAA 62.216 57.895 25.16 12.64 0.00 2.52
200 201 2.881352 GACGGCGAGGCGAGAAAG 60.881 66.667 25.16 0.00 0.00 2.62
205 206 2.488355 CGAGGCGAGAAAGCGGTA 59.512 61.111 0.00 0.00 38.18 4.02
206 207 1.586564 CGAGGCGAGAAAGCGGTAG 60.587 63.158 0.00 0.00 38.18 3.18
207 208 1.807886 GAGGCGAGAAAGCGGTAGA 59.192 57.895 0.00 0.00 38.18 2.59
208 209 0.248702 GAGGCGAGAAAGCGGTAGAG 60.249 60.000 0.00 0.00 38.18 2.43
209 210 1.227002 GGCGAGAAAGCGGTAGAGG 60.227 63.158 0.00 0.00 38.18 3.69
210 211 1.227002 GCGAGAAAGCGGTAGAGGG 60.227 63.158 0.00 0.00 0.00 4.30
211 212 1.664321 GCGAGAAAGCGGTAGAGGGA 61.664 60.000 0.00 0.00 0.00 4.20
212 213 0.382515 CGAGAAAGCGGTAGAGGGAG 59.617 60.000 0.00 0.00 0.00 4.30
213 214 0.103390 GAGAAAGCGGTAGAGGGAGC 59.897 60.000 0.00 0.00 0.00 4.70
214 215 1.227002 GAAAGCGGTAGAGGGAGCG 60.227 63.158 0.00 0.00 43.05 5.03
215 216 2.630592 GAAAGCGGTAGAGGGAGCGG 62.631 65.000 0.00 0.00 40.59 5.52
218 219 4.517934 CGGTAGAGGGAGCGGGGA 62.518 72.222 0.00 0.00 36.70 4.81
219 220 2.522193 GGTAGAGGGAGCGGGGAG 60.522 72.222 0.00 0.00 0.00 4.30
220 221 2.601868 GTAGAGGGAGCGGGGAGA 59.398 66.667 0.00 0.00 0.00 3.71
221 222 1.529713 GTAGAGGGAGCGGGGAGAG 60.530 68.421 0.00 0.00 0.00 3.20
222 223 1.696674 TAGAGGGAGCGGGGAGAGA 60.697 63.158 0.00 0.00 0.00 3.10
223 224 1.710996 TAGAGGGAGCGGGGAGAGAG 61.711 65.000 0.00 0.00 0.00 3.20
224 225 4.851214 AGGGAGCGGGGAGAGAGC 62.851 72.222 0.00 0.00 0.00 4.09
231 232 3.535962 GGGGAGAGAGCGGCAGAG 61.536 72.222 1.45 0.00 0.00 3.35
232 233 3.535962 GGGAGAGAGCGGCAGAGG 61.536 72.222 1.45 0.00 0.00 3.69
233 234 3.535962 GGAGAGAGCGGCAGAGGG 61.536 72.222 1.45 0.00 0.00 4.30
234 235 4.219999 GAGAGAGCGGCAGAGGGC 62.220 72.222 1.45 0.00 43.74 5.19
252 253 4.803426 GCGTGGCGAGGTGGAGAG 62.803 72.222 0.00 0.00 0.00 3.20
253 254 4.803426 CGTGGCGAGGTGGAGAGC 62.803 72.222 0.00 0.00 0.00 4.09
254 255 4.803426 GTGGCGAGGTGGAGAGCG 62.803 72.222 0.00 0.00 0.00 5.03
257 258 4.803426 GCGAGGTGGAGAGCGGTG 62.803 72.222 0.00 0.00 0.00 4.94
258 259 4.135153 CGAGGTGGAGAGCGGTGG 62.135 72.222 0.00 0.00 0.00 4.61
259 260 2.680352 GAGGTGGAGAGCGGTGGA 60.680 66.667 0.00 0.00 0.00 4.02
260 261 2.203788 AGGTGGAGAGCGGTGGAA 60.204 61.111 0.00 0.00 0.00 3.53
261 262 2.232298 GAGGTGGAGAGCGGTGGAAG 62.232 65.000 0.00 0.00 0.00 3.46
262 263 2.266055 GTGGAGAGCGGTGGAAGG 59.734 66.667 0.00 0.00 0.00 3.46
263 264 3.003173 TGGAGAGCGGTGGAAGGG 61.003 66.667 0.00 0.00 0.00 3.95
264 265 4.475135 GGAGAGCGGTGGAAGGGC 62.475 72.222 0.00 0.00 0.00 5.19
265 266 4.821589 GAGAGCGGTGGAAGGGCG 62.822 72.222 0.00 0.00 0.00 6.13
284 285 3.737172 GTGACGGGCGCTGCATTT 61.737 61.111 7.64 0.00 0.00 2.32
285 286 2.046796 TGACGGGCGCTGCATTTA 60.047 55.556 7.64 0.00 0.00 1.40
286 287 1.451207 TGACGGGCGCTGCATTTAT 60.451 52.632 7.64 0.00 0.00 1.40
287 288 0.179070 TGACGGGCGCTGCATTTATA 60.179 50.000 7.64 0.00 0.00 0.98
288 289 0.941542 GACGGGCGCTGCATTTATAA 59.058 50.000 7.64 0.00 0.00 0.98
289 290 1.332375 GACGGGCGCTGCATTTATAAA 59.668 47.619 7.64 0.00 0.00 1.40
290 291 1.333619 ACGGGCGCTGCATTTATAAAG 59.666 47.619 7.64 0.00 0.00 1.85
291 292 1.770957 GGGCGCTGCATTTATAAAGC 58.229 50.000 7.64 8.07 0.00 3.51
292 293 1.066908 GGGCGCTGCATTTATAAAGCA 59.933 47.619 7.64 16.36 35.33 3.91
293 294 2.288395 GGGCGCTGCATTTATAAAGCAT 60.288 45.455 7.64 0.00 37.68 3.79
294 295 2.727798 GGCGCTGCATTTATAAAGCATG 59.272 45.455 7.64 14.55 37.68 4.06
295 296 2.727798 GCGCTGCATTTATAAAGCATGG 59.272 45.455 17.13 13.96 37.68 3.66
296 297 2.727798 CGCTGCATTTATAAAGCATGGC 59.272 45.455 17.13 16.37 37.68 4.40
297 298 2.727798 GCTGCATTTATAAAGCATGGCG 59.272 45.455 17.13 10.27 37.68 5.69
298 299 3.311106 CTGCATTTATAAAGCATGGCGG 58.689 45.455 17.13 10.74 37.68 6.13
299 300 2.954989 TGCATTTATAAAGCATGGCGGA 59.045 40.909 14.44 0.00 32.55 5.54
300 301 3.243367 TGCATTTATAAAGCATGGCGGAC 60.243 43.478 14.44 0.00 32.55 4.79
301 302 3.554524 CATTTATAAAGCATGGCGGACG 58.445 45.455 3.94 0.00 0.00 4.79
302 303 0.941542 TTATAAAGCATGGCGGACGC 59.058 50.000 8.39 8.39 41.06 5.19
318 319 4.811761 GCCGCGCGCCAAAACTAG 62.812 66.667 27.36 8.58 0.00 2.57
319 320 4.811761 CCGCGCGCCAAAACTAGC 62.812 66.667 27.36 0.00 0.00 3.42
324 325 4.811761 CGCCAAAACTAGCGCGCC 62.812 66.667 30.33 10.31 46.50 6.53
325 326 3.732892 GCCAAAACTAGCGCGCCA 61.733 61.111 30.33 14.89 0.00 5.69
326 327 2.950673 CCAAAACTAGCGCGCCAA 59.049 55.556 30.33 16.15 0.00 4.52
327 328 1.284408 CCAAAACTAGCGCGCCAAA 59.716 52.632 30.33 13.22 0.00 3.28
328 329 0.318275 CCAAAACTAGCGCGCCAAAA 60.318 50.000 30.33 10.35 0.00 2.44
329 330 0.775861 CAAAACTAGCGCGCCAAAAC 59.224 50.000 30.33 0.00 0.00 2.43
330 331 0.666374 AAAACTAGCGCGCCAAAACT 59.334 45.000 30.33 11.01 0.00 2.66
331 332 1.515081 AAACTAGCGCGCCAAAACTA 58.485 45.000 30.33 11.67 0.00 2.24
332 333 1.076332 AACTAGCGCGCCAAAACTAG 58.924 50.000 30.33 22.98 38.44 2.57
333 334 1.348594 CTAGCGCGCCAAAACTAGC 59.651 57.895 30.33 0.00 0.00 3.42
340 341 4.811761 CCAAAACTAGCGCGCGCC 62.812 66.667 46.98 30.60 43.17 6.53
341 342 4.811761 CAAAACTAGCGCGCGCCC 62.812 66.667 46.98 25.08 43.17 6.13
379 380 4.166011 GATCTTTTGCGCGCGCCT 62.166 61.111 46.85 26.21 41.09 5.52
380 381 4.465512 ATCTTTTGCGCGCGCCTG 62.466 61.111 46.85 32.69 41.09 4.85
389 390 3.793144 GCGCGCCTGAGTTTCCTG 61.793 66.667 23.24 0.00 0.00 3.86
390 391 3.793144 CGCGCCTGAGTTTCCTGC 61.793 66.667 0.00 0.00 0.00 4.85
391 392 3.435186 GCGCCTGAGTTTCCTGCC 61.435 66.667 0.00 0.00 0.00 4.85
392 393 2.032528 CGCCTGAGTTTCCTGCCA 59.967 61.111 0.00 0.00 0.00 4.92
393 394 2.328099 CGCCTGAGTTTCCTGCCAC 61.328 63.158 0.00 0.00 0.00 5.01
394 395 1.973812 GCCTGAGTTTCCTGCCACC 60.974 63.158 0.00 0.00 0.00 4.61
395 396 1.672356 CCTGAGTTTCCTGCCACCG 60.672 63.158 0.00 0.00 0.00 4.94
396 397 2.281484 TGAGTTTCCTGCCACCGC 60.281 61.111 0.00 0.00 0.00 5.68
397 398 3.056328 GAGTTTCCTGCCACCGCC 61.056 66.667 0.00 0.00 0.00 6.13
398 399 4.660938 AGTTTCCTGCCACCGCCC 62.661 66.667 0.00 0.00 0.00 6.13
399 400 4.966787 GTTTCCTGCCACCGCCCA 62.967 66.667 0.00 0.00 0.00 5.36
400 401 4.211330 TTTCCTGCCACCGCCCAA 62.211 61.111 0.00 0.00 0.00 4.12
401 402 4.966787 TTCCTGCCACCGCCCAAC 62.967 66.667 0.00 0.00 0.00 3.77
412 413 2.126618 GCCCAACGCGCTAAAACC 60.127 61.111 5.73 0.00 0.00 3.27
413 414 2.174835 CCCAACGCGCTAAAACCG 59.825 61.111 5.73 0.00 0.00 4.44
419 420 4.957266 GCGCTAAAACCGCCTTTT 57.043 50.000 0.00 0.00 45.30 2.27
421 422 1.609932 GCGCTAAAACCGCCTTTTAC 58.390 50.000 0.00 0.00 45.30 2.01
422 423 1.730121 GCGCTAAAACCGCCTTTTACC 60.730 52.381 0.00 0.00 45.30 2.85
423 424 1.135603 CGCTAAAACCGCCTTTTACCC 60.136 52.381 0.00 0.00 33.84 3.69
424 425 1.203052 GCTAAAACCGCCTTTTACCCC 59.797 52.381 0.00 0.00 33.84 4.95
425 426 1.469703 CTAAAACCGCCTTTTACCCCG 59.530 52.381 0.00 0.00 33.84 5.73
426 427 1.808531 AAAACCGCCTTTTACCCCGC 61.809 55.000 0.00 0.00 29.69 6.13
450 451 4.416533 TTTTTGCGGCTGCTGTTG 57.583 50.000 20.27 0.00 43.34 3.33
451 452 1.812525 TTTTTGCGGCTGCTGTTGA 59.187 47.368 20.27 0.00 43.34 3.18
452 453 0.174389 TTTTTGCGGCTGCTGTTGAA 59.826 45.000 20.27 0.33 43.34 2.69
453 454 0.248990 TTTTGCGGCTGCTGTTGAAG 60.249 50.000 20.27 0.00 43.34 3.02
454 455 1.100463 TTTGCGGCTGCTGTTGAAGA 61.100 50.000 20.27 0.00 43.34 2.87
455 456 0.890542 TTGCGGCTGCTGTTGAAGAT 60.891 50.000 20.27 0.00 43.34 2.40
456 457 0.036483 TGCGGCTGCTGTTGAAGATA 60.036 50.000 20.27 0.00 43.34 1.98
457 458 0.375106 GCGGCTGCTGTTGAAGATAC 59.625 55.000 11.21 0.00 38.39 2.24
458 459 2.009042 GCGGCTGCTGTTGAAGATACT 61.009 52.381 11.21 0.00 38.39 2.12
459 460 1.929836 CGGCTGCTGTTGAAGATACTC 59.070 52.381 0.00 0.00 0.00 2.59
460 461 2.417924 CGGCTGCTGTTGAAGATACTCT 60.418 50.000 0.00 0.00 0.00 3.24
461 462 3.181486 CGGCTGCTGTTGAAGATACTCTA 60.181 47.826 0.00 0.00 0.00 2.43
462 463 4.678044 CGGCTGCTGTTGAAGATACTCTAA 60.678 45.833 0.00 0.00 0.00 2.10
463 464 4.808364 GGCTGCTGTTGAAGATACTCTAAG 59.192 45.833 0.00 0.00 0.00 2.18
464 465 5.415221 GCTGCTGTTGAAGATACTCTAAGT 58.585 41.667 0.00 0.00 0.00 2.24
465 466 5.290643 GCTGCTGTTGAAGATACTCTAAGTG 59.709 44.000 0.00 0.00 0.00 3.16
466 467 6.590234 TGCTGTTGAAGATACTCTAAGTGA 57.410 37.500 0.00 0.00 0.00 3.41
467 468 7.175347 TGCTGTTGAAGATACTCTAAGTGAT 57.825 36.000 0.00 0.00 0.00 3.06
468 469 7.038048 TGCTGTTGAAGATACTCTAAGTGATG 58.962 38.462 0.00 0.00 0.00 3.07
469 470 7.038659 GCTGTTGAAGATACTCTAAGTGATGT 58.961 38.462 0.00 0.00 0.00 3.06
470 471 7.221838 GCTGTTGAAGATACTCTAAGTGATGTC 59.778 40.741 0.00 0.00 0.00 3.06
471 472 8.122472 TGTTGAAGATACTCTAAGTGATGTCA 57.878 34.615 0.00 0.00 0.00 3.58
472 473 8.585018 TGTTGAAGATACTCTAAGTGATGTCAA 58.415 33.333 0.00 0.00 0.00 3.18
473 474 9.424319 GTTGAAGATACTCTAAGTGATGTCAAA 57.576 33.333 0.00 0.00 0.00 2.69
474 475 9.996554 TTGAAGATACTCTAAGTGATGTCAAAA 57.003 29.630 0.00 0.00 0.00 2.44
475 476 9.645059 TGAAGATACTCTAAGTGATGTCAAAAG 57.355 33.333 0.00 0.00 0.00 2.27
476 477 8.485976 AAGATACTCTAAGTGATGTCAAAAGC 57.514 34.615 0.00 0.00 0.00 3.51
477 478 6.754209 AGATACTCTAAGTGATGTCAAAAGCG 59.246 38.462 0.00 0.00 0.00 4.68
478 479 3.433615 ACTCTAAGTGATGTCAAAAGCGC 59.566 43.478 0.00 0.00 0.00 5.92
479 480 3.664107 TCTAAGTGATGTCAAAAGCGCT 58.336 40.909 2.64 2.64 0.00 5.92
480 481 4.816392 TCTAAGTGATGTCAAAAGCGCTA 58.184 39.130 12.05 0.00 0.00 4.26
481 482 5.419542 TCTAAGTGATGTCAAAAGCGCTAT 58.580 37.500 12.05 0.00 0.00 2.97
482 483 5.874810 TCTAAGTGATGTCAAAAGCGCTATT 59.125 36.000 12.05 4.48 0.00 1.73
483 484 7.039270 TCTAAGTGATGTCAAAAGCGCTATTA 58.961 34.615 12.05 0.00 0.00 0.98
484 485 6.683974 AAGTGATGTCAAAAGCGCTATTAT 57.316 33.333 12.05 0.00 0.00 1.28
485 486 7.786178 AAGTGATGTCAAAAGCGCTATTATA 57.214 32.000 12.05 0.00 0.00 0.98
486 487 7.969536 AGTGATGTCAAAAGCGCTATTATAT 57.030 32.000 12.05 0.97 0.00 0.86
487 488 8.383318 AGTGATGTCAAAAGCGCTATTATATT 57.617 30.769 12.05 0.00 0.00 1.28
488 489 9.489084 AGTGATGTCAAAAGCGCTATTATATTA 57.511 29.630 12.05 0.00 0.00 0.98
493 494 9.267084 TGTCAAAAGCGCTATTATATTATGTCA 57.733 29.630 12.05 3.37 0.00 3.58
494 495 9.530129 GTCAAAAGCGCTATTATATTATGTCAC 57.470 33.333 12.05 0.00 0.00 3.67
495 496 8.432359 TCAAAAGCGCTATTATATTATGTCACG 58.568 33.333 12.05 0.00 0.00 4.35
496 497 6.887376 AAGCGCTATTATATTATGTCACGG 57.113 37.500 12.05 0.00 0.00 4.94
497 498 6.203808 AGCGCTATTATATTATGTCACGGA 57.796 37.500 8.99 0.00 0.00 4.69
498 499 6.266323 AGCGCTATTATATTATGTCACGGAG 58.734 40.000 8.99 0.00 0.00 4.63
499 500 5.459107 GCGCTATTATATTATGTCACGGAGG 59.541 44.000 0.00 0.00 0.00 4.30
500 501 5.977725 CGCTATTATATTATGTCACGGAGGG 59.022 44.000 0.00 0.00 0.00 4.30
501 502 6.183360 CGCTATTATATTATGTCACGGAGGGA 60.183 42.308 0.00 0.00 0.00 4.20
502 503 7.203910 GCTATTATATTATGTCACGGAGGGAG 58.796 42.308 0.00 0.00 0.00 4.30
503 504 7.147880 GCTATTATATTATGTCACGGAGGGAGT 60.148 40.741 0.00 0.00 0.00 3.85
504 505 9.404848 CTATTATATTATGTCACGGAGGGAGTA 57.595 37.037 0.00 0.00 0.00 2.59
505 506 8.660295 ATTATATTATGTCACGGAGGGAGTAA 57.340 34.615 0.00 0.00 0.00 2.24
506 507 6.989155 ATATTATGTCACGGAGGGAGTAAA 57.011 37.500 0.00 0.00 0.00 2.01
507 508 5.687166 ATTATGTCACGGAGGGAGTAAAA 57.313 39.130 0.00 0.00 0.00 1.52
508 509 5.486735 TTATGTCACGGAGGGAGTAAAAA 57.513 39.130 0.00 0.00 0.00 1.94
526 527 3.904136 AAAAGCACATGCAGTCAGTAC 57.096 42.857 6.64 0.00 45.16 2.73
527 528 1.432514 AAGCACATGCAGTCAGTACG 58.567 50.000 6.64 0.00 45.16 3.67
528 529 1.016130 AGCACATGCAGTCAGTACGC 61.016 55.000 6.64 0.00 45.16 4.42
529 530 1.291184 GCACATGCAGTCAGTACGCA 61.291 55.000 0.00 0.00 41.59 5.24
530 531 0.717784 CACATGCAGTCAGTACGCAG 59.282 55.000 0.00 0.00 38.11 5.18
531 532 0.603065 ACATGCAGTCAGTACGCAGA 59.397 50.000 0.00 0.00 38.11 4.26
532 533 0.994995 CATGCAGTCAGTACGCAGAC 59.005 55.000 0.00 7.73 38.11 3.51
533 534 0.108615 ATGCAGTCAGTACGCAGACC 60.109 55.000 11.01 1.06 38.11 3.85
534 535 1.179174 TGCAGTCAGTACGCAGACCT 61.179 55.000 11.01 0.00 35.38 3.85
535 536 0.456995 GCAGTCAGTACGCAGACCTC 60.457 60.000 11.01 2.63 35.38 3.85
536 537 1.169577 CAGTCAGTACGCAGACCTCT 58.830 55.000 11.01 0.00 35.38 3.69
537 538 1.135546 CAGTCAGTACGCAGACCTCTG 60.136 57.143 11.01 0.00 46.40 3.35
555 556 2.562125 GCCGTGGCAACCTTATTGA 58.438 52.632 5.89 0.00 41.49 2.57
556 557 0.451783 GCCGTGGCAACCTTATTGAG 59.548 55.000 5.89 0.00 41.49 3.02
557 558 0.451783 CCGTGGCAACCTTATTGAGC 59.548 55.000 0.00 0.00 0.00 4.26
558 559 1.453155 CGTGGCAACCTTATTGAGCT 58.547 50.000 0.00 0.00 0.00 4.09
559 560 2.627945 CGTGGCAACCTTATTGAGCTA 58.372 47.619 0.00 0.00 0.00 3.32
560 561 3.006940 CGTGGCAACCTTATTGAGCTAA 58.993 45.455 0.00 0.00 0.00 3.09
561 562 3.438781 CGTGGCAACCTTATTGAGCTAAA 59.561 43.478 0.00 0.00 0.00 1.85
562 563 4.083003 CGTGGCAACCTTATTGAGCTAAAA 60.083 41.667 0.00 0.00 0.00 1.52
563 564 5.402398 GTGGCAACCTTATTGAGCTAAAAG 58.598 41.667 0.00 0.00 0.00 2.27
564 565 5.183140 GTGGCAACCTTATTGAGCTAAAAGA 59.817 40.000 0.00 0.00 0.00 2.52
565 566 5.415701 TGGCAACCTTATTGAGCTAAAAGAG 59.584 40.000 0.00 0.00 0.00 2.85
575 576 1.796796 CTAAAAGAGCTGCCGTGGC 59.203 57.895 3.30 3.30 42.35 5.01
591 592 3.350912 CGTGGCAACGTTATTATTGAGC 58.649 45.455 5.16 0.00 44.93 4.26
592 593 3.063452 CGTGGCAACGTTATTATTGAGCT 59.937 43.478 5.16 0.00 44.93 4.09
593 594 4.269123 CGTGGCAACGTTATTATTGAGCTA 59.731 41.667 5.16 0.00 44.93 3.32
594 595 5.220510 CGTGGCAACGTTATTATTGAGCTAA 60.221 40.000 5.16 0.00 44.93 3.09
595 596 6.548171 GTGGCAACGTTATTATTGAGCTAAA 58.452 36.000 0.00 0.00 42.51 1.85
596 597 7.024768 GTGGCAACGTTATTATTGAGCTAAAA 58.975 34.615 0.00 0.00 42.51 1.52
597 598 7.539366 GTGGCAACGTTATTATTGAGCTAAAAA 59.461 33.333 0.00 0.00 42.51 1.94
598 599 7.753132 TGGCAACGTTATTATTGAGCTAAAAAG 59.247 33.333 0.00 0.00 42.51 2.27
599 600 7.966204 GGCAACGTTATTATTGAGCTAAAAAGA 59.034 33.333 0.00 0.00 0.00 2.52
600 601 9.000018 GCAACGTTATTATTGAGCTAAAAAGAG 58.000 33.333 0.00 0.00 0.00 2.85
601 602 9.000018 CAACGTTATTATTGAGCTAAAAAGAGC 58.000 33.333 0.00 0.00 43.19 4.09
609 610 2.626088 GCTAAAAAGAGCTGCCACTG 57.374 50.000 0.00 0.00 39.50 3.66
610 611 1.402062 GCTAAAAAGAGCTGCCACTGC 60.402 52.381 0.00 0.00 39.50 4.40
611 612 1.200948 CTAAAAAGAGCTGCCACTGCC 59.799 52.381 0.00 0.00 36.33 4.85
612 613 0.756442 AAAAAGAGCTGCCACTGCCA 60.756 50.000 0.00 0.00 36.33 4.92
613 614 0.541296 AAAAGAGCTGCCACTGCCAT 60.541 50.000 0.00 0.00 36.33 4.40
614 615 1.248785 AAAGAGCTGCCACTGCCATG 61.249 55.000 0.00 0.00 36.33 3.66
615 616 3.138798 GAGCTGCCACTGCCATGG 61.139 66.667 7.63 7.63 43.26 3.66
626 627 4.234019 GCCATGGCACCATAACGA 57.766 55.556 32.08 0.00 41.49 3.85
627 628 2.024918 GCCATGGCACCATAACGAG 58.975 57.895 32.08 0.00 41.49 4.18
628 629 0.463654 GCCATGGCACCATAACGAGA 60.464 55.000 32.08 0.00 41.49 4.04
629 630 1.299541 CCATGGCACCATAACGAGAC 58.700 55.000 0.00 0.00 34.91 3.36
630 631 1.406751 CCATGGCACCATAACGAGACA 60.407 52.381 0.00 0.00 34.91 3.41
631 632 1.935873 CATGGCACCATAACGAGACAG 59.064 52.381 0.89 0.00 34.91 3.51
632 633 0.391130 TGGCACCATAACGAGACAGC 60.391 55.000 0.00 0.00 0.00 4.40
633 634 0.391130 GGCACCATAACGAGACAGCA 60.391 55.000 0.00 0.00 0.00 4.41
634 635 0.721718 GCACCATAACGAGACAGCAC 59.278 55.000 0.00 0.00 0.00 4.40
635 636 1.939381 GCACCATAACGAGACAGCACA 60.939 52.381 0.00 0.00 0.00 4.57
636 637 2.412870 CACCATAACGAGACAGCACAA 58.587 47.619 0.00 0.00 0.00 3.33
637 638 2.413112 CACCATAACGAGACAGCACAAG 59.587 50.000 0.00 0.00 0.00 3.16
638 639 2.037251 ACCATAACGAGACAGCACAAGT 59.963 45.455 0.00 0.00 0.00 3.16
639 640 3.067106 CCATAACGAGACAGCACAAGTT 58.933 45.455 0.00 0.00 0.00 2.66
640 641 3.498397 CCATAACGAGACAGCACAAGTTT 59.502 43.478 0.00 0.00 0.00 2.66
641 642 4.688879 CCATAACGAGACAGCACAAGTTTA 59.311 41.667 0.00 0.00 0.00 2.01
642 643 5.389516 CCATAACGAGACAGCACAAGTTTAC 60.390 44.000 0.00 0.00 0.00 2.01
643 644 3.173668 ACGAGACAGCACAAGTTTACA 57.826 42.857 0.00 0.00 0.00 2.41
644 645 3.728845 ACGAGACAGCACAAGTTTACAT 58.271 40.909 0.00 0.00 0.00 2.29
645 646 3.741344 ACGAGACAGCACAAGTTTACATC 59.259 43.478 0.00 0.00 0.00 3.06
646 647 3.740832 CGAGACAGCACAAGTTTACATCA 59.259 43.478 0.00 0.00 0.00 3.07
647 648 4.211164 CGAGACAGCACAAGTTTACATCAA 59.789 41.667 0.00 0.00 0.00 2.57
670 671 0.447011 GCATCAGCTTGCAGAGTGTC 59.553 55.000 5.50 0.00 42.31 3.67
676 677 0.664761 GCTTGCAGAGTGTCAGCAAA 59.335 50.000 7.94 0.00 45.83 3.68
682 683 2.810274 GCAGAGTGTCAGCAAAGATCAA 59.190 45.455 0.00 0.00 0.00 2.57
683 684 3.120269 GCAGAGTGTCAGCAAAGATCAAG 60.120 47.826 0.00 0.00 0.00 3.02
702 703 4.432741 GGACTGCCCTTGCTCCCC 62.433 72.222 0.00 0.00 38.71 4.81
739 740 6.095440 ACATACATAAGCTGTTGGATTTGGAC 59.905 38.462 0.00 0.00 39.39 4.02
748 749 2.698274 GTTGGATTTGGACCCACAGTTT 59.302 45.455 0.00 0.00 31.11 2.66
936 942 3.324170 CGCCTCCGCTTATATACCG 57.676 57.895 0.00 0.00 0.00 4.02
943 949 1.544691 CCGCTTATATACCGCACCTCT 59.455 52.381 4.60 0.00 0.00 3.69
965 971 3.430862 TTCCGCCTGCACGCATTC 61.431 61.111 8.42 0.00 0.00 2.67
977 988 1.787847 CGCATTCGTGGAGACAACC 59.212 57.895 0.00 0.00 46.06 3.77
1158 1187 2.979197 CTCGCTGGTCGTCCTCGTT 61.979 63.158 11.70 0.00 39.67 3.85
1388 1417 2.665000 CATGTCGCTCTGGGTGGT 59.335 61.111 0.00 0.00 0.00 4.16
1392 1421 4.671590 TCGCTCTGGGTGGTCGGA 62.672 66.667 0.00 0.00 0.00 4.55
1582 1648 2.737679 GCTAATACAAGCCCGTCGTCTT 60.738 50.000 0.00 0.00 36.45 3.01
1680 1784 1.614824 CCCTGTTCTCTCCCCTGCT 60.615 63.158 0.00 0.00 0.00 4.24
1681 1785 1.621672 CCCTGTTCTCTCCCCTGCTC 61.622 65.000 0.00 0.00 0.00 4.26
1682 1786 1.515020 CTGTTCTCTCCCCTGCTCG 59.485 63.158 0.00 0.00 0.00 5.03
1726 1830 9.503399 TCCCTAAGAAGAACAAAATAAGAAGAC 57.497 33.333 0.00 0.00 0.00 3.01
1770 1874 5.089970 TCATGTGAGGGTCTCTTTACATG 57.910 43.478 18.24 18.24 44.13 3.21
1771 1875 4.532126 TCATGTGAGGGTCTCTTTACATGT 59.468 41.667 21.21 2.69 43.71 3.21
1866 1970 7.925392 AAAGCATTTACAAAAAGCCACCGCT 62.925 40.000 0.00 0.00 42.41 5.52
1934 2038 1.668419 AGCACTGGCCATCGTAATTC 58.332 50.000 5.51 0.00 42.56 2.17
1942 2046 3.256879 TGGCCATCGTAATTCTTTTTGCA 59.743 39.130 0.00 0.00 0.00 4.08
1971 2075 3.062763 CTGATGGCTTAGTAATCAGGCG 58.937 50.000 14.39 0.00 42.30 5.52
1974 2078 2.627945 TGGCTTAGTAATCAGGCGTTG 58.372 47.619 0.00 0.00 38.42 4.10
1977 2081 2.608090 GCTTAGTAATCAGGCGTTGACC 59.392 50.000 0.00 0.00 38.99 4.02
1980 2084 1.135083 AGTAATCAGGCGTTGACCTCG 60.135 52.381 0.00 0.00 38.26 4.63
2012 2116 3.388841 CCACCCGTTAGGCTGAGT 58.611 61.111 0.00 0.00 40.58 3.41
2016 2120 1.745489 CCCGTTAGGCTGAGTTGGC 60.745 63.158 0.00 0.00 35.76 4.52
2019 2123 1.453155 CGTTAGGCTGAGTTGGCAAT 58.547 50.000 1.92 0.00 34.73 3.56
2036 2140 3.877064 GCAATATAATGCCACACGTGAG 58.123 45.455 25.01 15.20 40.49 3.51
2038 2142 4.319046 GCAATATAATGCCACACGTGAGAG 60.319 45.833 25.01 11.12 40.49 3.20
2039 2143 1.656652 ATAATGCCACACGTGAGAGC 58.343 50.000 25.01 20.66 0.00 4.09
2040 2144 0.320050 TAATGCCACACGTGAGAGCA 59.680 50.000 25.01 25.31 37.94 4.26
2041 2145 0.952497 AATGCCACACGTGAGAGCAG 60.952 55.000 25.01 2.35 36.80 4.24
2042 2146 1.820010 ATGCCACACGTGAGAGCAGA 61.820 55.000 25.01 7.09 36.80 4.26
2045 2149 0.946221 CCACACGTGAGAGCAGAACC 60.946 60.000 25.01 0.00 0.00 3.62
2046 2150 0.249447 CACACGTGAGAGCAGAACCA 60.249 55.000 25.01 0.00 0.00 3.67
2047 2151 0.681733 ACACGTGAGAGCAGAACCAT 59.318 50.000 25.01 0.00 0.00 3.55
2048 2152 1.337260 ACACGTGAGAGCAGAACCATC 60.337 52.381 25.01 0.00 0.00 3.51
2049 2153 1.067283 CACGTGAGAGCAGAACCATCT 60.067 52.381 10.90 0.00 35.88 2.90
2060 2166 0.915364 GAACCATCTGCCCCTTCTCT 59.085 55.000 0.00 0.00 0.00 3.10
2116 2222 1.001641 CACCTCCTCCAAGCCCAAG 60.002 63.158 0.00 0.00 0.00 3.61
2117 2223 1.151810 ACCTCCTCCAAGCCCAAGA 60.152 57.895 0.00 0.00 0.00 3.02
2118 2224 1.301293 CCTCCTCCAAGCCCAAGAC 59.699 63.158 0.00 0.00 0.00 3.01
2119 2225 1.078848 CTCCTCCAAGCCCAAGACG 60.079 63.158 0.00 0.00 0.00 4.18
2120 2226 1.535444 TCCTCCAAGCCCAAGACGA 60.535 57.895 0.00 0.00 0.00 4.20
2121 2227 1.376037 CCTCCAAGCCCAAGACGAC 60.376 63.158 0.00 0.00 0.00 4.34
2122 2228 1.376037 CTCCAAGCCCAAGACGACC 60.376 63.158 0.00 0.00 0.00 4.79
2123 2229 2.359975 CCAAGCCCAAGACGACCC 60.360 66.667 0.00 0.00 0.00 4.46
2124 2230 2.750350 CAAGCCCAAGACGACCCT 59.250 61.111 0.00 0.00 0.00 4.34
2125 2231 1.550130 CCAAGCCCAAGACGACCCTA 61.550 60.000 0.00 0.00 0.00 3.53
2126 2232 0.391263 CAAGCCCAAGACGACCCTAC 60.391 60.000 0.00 0.00 0.00 3.18
2127 2233 1.885163 AAGCCCAAGACGACCCTACG 61.885 60.000 0.00 0.00 39.31 3.51
2128 2234 2.183555 CCCAAGACGACCCTACGC 59.816 66.667 0.00 0.00 36.70 4.42
2129 2235 2.202570 CCAAGACGACCCTACGCG 60.203 66.667 3.53 3.53 36.70 6.01
2130 2236 2.564975 CAAGACGACCCTACGCGT 59.435 61.111 19.17 19.17 44.33 6.01
2140 2246 4.710695 CTACGCGTCGTGCCACCA 62.711 66.667 18.63 0.00 41.39 4.17
2141 2247 4.281947 TACGCGTCGTGCCACCAA 62.282 61.111 18.63 0.00 41.39 3.67
2156 2262 4.301505 CAACGGTGGATGTGGGAG 57.698 61.111 0.00 0.00 0.00 4.30
2157 2263 1.374947 CAACGGTGGATGTGGGAGT 59.625 57.895 0.00 0.00 0.00 3.85
2158 2264 0.250727 CAACGGTGGATGTGGGAGTT 60.251 55.000 0.00 0.00 0.00 3.01
2159 2265 0.036306 AACGGTGGATGTGGGAGTTC 59.964 55.000 0.00 0.00 0.00 3.01
2160 2266 0.836400 ACGGTGGATGTGGGAGTTCT 60.836 55.000 0.00 0.00 0.00 3.01
2161 2267 0.324943 CGGTGGATGTGGGAGTTCTT 59.675 55.000 0.00 0.00 0.00 2.52
2162 2268 1.553248 CGGTGGATGTGGGAGTTCTTA 59.447 52.381 0.00 0.00 0.00 2.10
2163 2269 2.170607 CGGTGGATGTGGGAGTTCTTAT 59.829 50.000 0.00 0.00 0.00 1.73
2164 2270 3.370527 CGGTGGATGTGGGAGTTCTTATT 60.371 47.826 0.00 0.00 0.00 1.40
2165 2271 4.141801 CGGTGGATGTGGGAGTTCTTATTA 60.142 45.833 0.00 0.00 0.00 0.98
2166 2272 5.368989 GGTGGATGTGGGAGTTCTTATTAG 58.631 45.833 0.00 0.00 0.00 1.73
2167 2273 4.816925 GTGGATGTGGGAGTTCTTATTAGC 59.183 45.833 0.00 0.00 0.00 3.09
2168 2274 4.141482 TGGATGTGGGAGTTCTTATTAGCC 60.141 45.833 0.00 0.00 0.00 3.93
2169 2275 4.141482 GGATGTGGGAGTTCTTATTAGCCA 60.141 45.833 0.00 0.00 0.00 4.75
2170 2276 4.216411 TGTGGGAGTTCTTATTAGCCAC 57.784 45.455 0.00 0.00 32.97 5.01
2171 2277 3.195661 GTGGGAGTTCTTATTAGCCACG 58.804 50.000 0.00 0.00 0.00 4.94
2172 2278 2.210961 GGGAGTTCTTATTAGCCACGC 58.789 52.381 0.00 0.00 0.00 5.34
2173 2279 2.158943 GGGAGTTCTTATTAGCCACGCT 60.159 50.000 0.00 0.00 43.41 5.07
2174 2280 3.069158 GGGAGTTCTTATTAGCCACGCTA 59.931 47.826 0.00 0.00 40.44 4.26
2175 2281 4.262506 GGGAGTTCTTATTAGCCACGCTAT 60.263 45.833 0.00 0.00 41.01 2.97
2176 2282 4.686554 GGAGTTCTTATTAGCCACGCTATG 59.313 45.833 0.00 0.00 41.01 2.23
2177 2283 5.277857 AGTTCTTATTAGCCACGCTATGT 57.722 39.130 0.00 0.00 41.01 2.29
2189 2295 3.251817 GCTATGTGCTAGCGTTCGA 57.748 52.632 10.77 0.00 43.30 3.71
2190 2296 1.124462 GCTATGTGCTAGCGTTCGAG 58.876 55.000 10.77 4.76 43.30 4.04
2191 2297 1.124462 CTATGTGCTAGCGTTCGAGC 58.876 55.000 10.77 0.00 40.72 5.03
2192 2298 0.248907 TATGTGCTAGCGTTCGAGCC 60.249 55.000 10.77 0.00 39.76 4.70
2193 2299 2.126071 GTGCTAGCGTTCGAGCCA 60.126 61.111 10.77 0.00 39.76 4.75
2194 2300 2.161486 GTGCTAGCGTTCGAGCCAG 61.161 63.158 10.77 0.00 39.76 4.85
2195 2301 2.340328 TGCTAGCGTTCGAGCCAGA 61.340 57.895 10.77 0.00 39.76 3.86
2196 2302 1.587613 GCTAGCGTTCGAGCCAGAG 60.588 63.158 0.00 0.00 35.29 3.35
2197 2303 1.587613 CTAGCGTTCGAGCCAGAGC 60.588 63.158 0.00 0.00 38.01 4.09
2198 2304 3.396911 TAGCGTTCGAGCCAGAGCG 62.397 63.158 10.13 10.13 46.67 5.03
2201 2307 3.482783 GTTCGAGCCAGAGCGCAC 61.483 66.667 11.47 2.25 46.67 5.34
2202 2308 4.742201 TTCGAGCCAGAGCGCACC 62.742 66.667 11.47 0.00 46.67 5.01
2205 2311 4.828925 GAGCCAGAGCGCACCTCC 62.829 72.222 11.47 0.00 46.67 4.30
2207 2313 4.828925 GCCAGAGCGCACCTCCTC 62.829 72.222 11.47 0.00 41.74 3.71
2208 2314 4.154347 CCAGAGCGCACCTCCTCC 62.154 72.222 11.47 0.00 41.74 4.30
2209 2315 4.154347 CAGAGCGCACCTCCTCCC 62.154 72.222 11.47 0.00 41.74 4.30
2255 2361 2.281208 GCGGCACACACCCTGTTA 60.281 61.111 0.00 0.00 0.00 2.41
2256 2362 1.674322 GCGGCACACACCCTGTTAT 60.674 57.895 0.00 0.00 0.00 1.89
2257 2363 1.241315 GCGGCACACACCCTGTTATT 61.241 55.000 0.00 0.00 0.00 1.40
2258 2364 1.243902 CGGCACACACCCTGTTATTT 58.756 50.000 0.00 0.00 0.00 1.40
2259 2365 1.199097 CGGCACACACCCTGTTATTTC 59.801 52.381 0.00 0.00 0.00 2.17
2260 2366 1.544246 GGCACACACCCTGTTATTTCC 59.456 52.381 0.00 0.00 0.00 3.13
2261 2367 2.235016 GCACACACCCTGTTATTTCCA 58.765 47.619 0.00 0.00 0.00 3.53
2262 2368 2.825532 GCACACACCCTGTTATTTCCAT 59.174 45.455 0.00 0.00 0.00 3.41
2263 2369 3.258123 GCACACACCCTGTTATTTCCATT 59.742 43.478 0.00 0.00 0.00 3.16
2264 2370 4.262420 GCACACACCCTGTTATTTCCATTT 60.262 41.667 0.00 0.00 0.00 2.32
2265 2371 5.469479 CACACACCCTGTTATTTCCATTTC 58.531 41.667 0.00 0.00 0.00 2.17
2266 2372 5.010516 CACACACCCTGTTATTTCCATTTCA 59.989 40.000 0.00 0.00 0.00 2.69
2267 2373 5.779771 ACACACCCTGTTATTTCCATTTCAT 59.220 36.000 0.00 0.00 0.00 2.57
2268 2374 6.269769 ACACACCCTGTTATTTCCATTTCATT 59.730 34.615 0.00 0.00 0.00 2.57
2269 2375 7.160726 CACACCCTGTTATTTCCATTTCATTT 58.839 34.615 0.00 0.00 0.00 2.32
2270 2376 7.661027 CACACCCTGTTATTTCCATTTCATTTT 59.339 33.333 0.00 0.00 0.00 1.82
2271 2377 8.217111 ACACCCTGTTATTTCCATTTCATTTTT 58.783 29.630 0.00 0.00 0.00 1.94
2318 2424 8.443953 AATTTGGGATTTCAACAAAAATTCGA 57.556 26.923 0.00 0.00 37.60 3.71
2319 2425 7.849804 TTTGGGATTTCAACAAAAATTCGAA 57.150 28.000 0.00 0.00 31.79 3.71
2320 2426 7.849804 TTGGGATTTCAACAAAAATTCGAAA 57.150 28.000 0.00 0.00 0.00 3.46
2321 2427 7.849804 TGGGATTTCAACAAAAATTCGAAAA 57.150 28.000 0.00 0.00 0.00 2.29
2322 2428 8.268850 TGGGATTTCAACAAAAATTCGAAAAA 57.731 26.923 0.00 0.00 0.00 1.94
2367 2473 9.654417 GTTCAAGAAATCATGAAATGTTTTTGG 57.346 29.630 0.00 0.00 43.97 3.28
2368 2474 9.610705 TTCAAGAAATCATGAAATGTTTTTGGA 57.389 25.926 0.00 0.00 43.97 3.53
2369 2475 9.781633 TCAAGAAATCATGAAATGTTTTTGGAT 57.218 25.926 0.00 0.00 43.97 3.41
2452 2558 8.818141 TTTTGTAAATGTTCACAAAACTCACA 57.182 26.923 8.17 0.00 45.10 3.58
2453 2559 8.818141 TTTGTAAATGTTCACAAAACTCACAA 57.182 26.923 0.00 0.00 40.64 3.33
2454 2560 8.459521 TTGTAAATGTTCACAAAACTCACAAG 57.540 30.769 0.00 0.00 31.93 3.16
2455 2561 7.821652 TGTAAATGTTCACAAAACTCACAAGA 58.178 30.769 0.00 0.00 0.00 3.02
2456 2562 8.465999 TGTAAATGTTCACAAAACTCACAAGAT 58.534 29.630 0.00 0.00 0.00 2.40
2457 2563 7.760131 AAATGTTCACAAAACTCACAAGATG 57.240 32.000 0.00 0.00 0.00 2.90
2458 2564 6.698008 ATGTTCACAAAACTCACAAGATGA 57.302 33.333 0.00 0.00 35.45 2.92
2459 2565 6.698008 TGTTCACAAAACTCACAAGATGAT 57.302 33.333 0.00 0.00 36.48 2.45
2460 2566 7.099266 TGTTCACAAAACTCACAAGATGATT 57.901 32.000 0.00 0.00 36.48 2.57
2461 2567 7.195646 TGTTCACAAAACTCACAAGATGATTC 58.804 34.615 0.00 0.00 36.48 2.52
2462 2568 7.067372 TGTTCACAAAACTCACAAGATGATTCT 59.933 33.333 0.00 0.00 36.48 2.40
2463 2569 6.962686 TCACAAAACTCACAAGATGATTCTG 58.037 36.000 0.00 0.00 36.48 3.02
2464 2570 6.767423 TCACAAAACTCACAAGATGATTCTGA 59.233 34.615 0.00 0.00 36.48 3.27
2465 2571 7.282901 TCACAAAACTCACAAGATGATTCTGAA 59.717 33.333 0.00 0.00 36.48 3.02
2466 2572 8.080417 CACAAAACTCACAAGATGATTCTGAAT 58.920 33.333 1.81 1.81 36.48 2.57
2467 2573 8.636213 ACAAAACTCACAAGATGATTCTGAATT 58.364 29.630 4.11 0.00 36.48 2.17
2470 2576 8.853077 AACTCACAAGATGATTCTGAATTACA 57.147 30.769 4.11 0.00 36.48 2.41
2471 2577 8.853077 ACTCACAAGATGATTCTGAATTACAA 57.147 30.769 4.11 0.00 36.48 2.41
2472 2578 9.288576 ACTCACAAGATGATTCTGAATTACAAA 57.711 29.630 4.11 0.00 36.48 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.746277 GTGCCAACGCGGGAGATT 60.746 61.111 12.47 0.00 34.57 2.40
10 11 1.441732 AACTTCCCGAACGTGCCAAC 61.442 55.000 0.00 0.00 0.00 3.77
11 12 1.153127 AACTTCCCGAACGTGCCAA 60.153 52.632 0.00 0.00 0.00 4.52
12 13 1.595929 GAACTTCCCGAACGTGCCA 60.596 57.895 0.00 0.00 0.00 4.92
13 14 0.953960 ATGAACTTCCCGAACGTGCC 60.954 55.000 0.00 0.00 0.00 5.01
14 15 0.165944 CATGAACTTCCCGAACGTGC 59.834 55.000 0.00 0.00 0.00 5.34
15 16 1.459592 GACATGAACTTCCCGAACGTG 59.540 52.381 0.00 0.00 0.00 4.49
16 17 1.607251 GGACATGAACTTCCCGAACGT 60.607 52.381 0.00 0.00 0.00 3.99
17 18 1.076332 GGACATGAACTTCCCGAACG 58.924 55.000 0.00 0.00 0.00 3.95
18 19 1.450025 GGGACATGAACTTCCCGAAC 58.550 55.000 0.00 0.00 42.35 3.95
19 20 3.948735 GGGACATGAACTTCCCGAA 57.051 52.632 0.00 0.00 42.35 4.30
23 24 0.245539 TCGTCGGGACATGAACTTCC 59.754 55.000 0.00 0.00 0.00 3.46
24 25 1.201647 TCTCGTCGGGACATGAACTTC 59.798 52.381 0.00 0.00 0.00 3.01
25 26 1.067776 GTCTCGTCGGGACATGAACTT 60.068 52.381 20.35 0.00 34.23 2.66
26 27 0.526662 GTCTCGTCGGGACATGAACT 59.473 55.000 20.35 0.00 34.23 3.01
27 28 0.458025 GGTCTCGTCGGGACATGAAC 60.458 60.000 25.78 5.18 35.61 3.18
28 29 1.888018 GGTCTCGTCGGGACATGAA 59.112 57.895 25.78 0.00 35.61 2.57
29 30 2.404186 CGGTCTCGTCGGGACATGA 61.404 63.158 25.78 0.00 35.61 3.07
30 31 2.102357 CGGTCTCGTCGGGACATG 59.898 66.667 25.78 14.15 35.61 3.21
31 32 3.823330 GCGGTCTCGTCGGGACAT 61.823 66.667 25.78 0.00 38.89 3.06
87 88 4.351938 TTCGACACCGCCCACGAG 62.352 66.667 0.00 0.00 43.93 4.18
88 89 4.351938 CTTCGACACCGCCCACGA 62.352 66.667 0.00 0.00 43.93 4.35
90 91 4.309950 ACCTTCGACACCGCCCAC 62.310 66.667 0.00 0.00 35.37 4.61
91 92 4.308458 CACCTTCGACACCGCCCA 62.308 66.667 0.00 0.00 35.37 5.36
93 94 4.681978 AGCACCTTCGACACCGCC 62.682 66.667 0.00 0.00 35.37 6.13
94 95 3.414700 CAGCACCTTCGACACCGC 61.415 66.667 0.00 0.00 35.37 5.68
95 96 1.734477 CTCAGCACCTTCGACACCG 60.734 63.158 0.00 0.00 37.07 4.94
96 97 1.374758 CCTCAGCACCTTCGACACC 60.375 63.158 0.00 0.00 0.00 4.16
97 98 2.029844 GCCTCAGCACCTTCGACAC 61.030 63.158 0.00 0.00 39.53 3.67
98 99 2.343758 GCCTCAGCACCTTCGACA 59.656 61.111 0.00 0.00 39.53 4.35
99 100 2.435059 GGCCTCAGCACCTTCGAC 60.435 66.667 0.00 0.00 42.56 4.20
100 101 4.069232 CGGCCTCAGCACCTTCGA 62.069 66.667 0.00 0.00 42.56 3.71
101 102 3.997064 CTCGGCCTCAGCACCTTCG 62.997 68.421 0.00 0.00 42.56 3.79
102 103 2.125350 CTCGGCCTCAGCACCTTC 60.125 66.667 0.00 0.00 42.56 3.46
103 104 3.710722 CCTCGGCCTCAGCACCTT 61.711 66.667 0.00 0.00 42.56 3.50
116 117 3.554692 GTTCCGACATGCGCCTCG 61.555 66.667 4.18 8.68 39.11 4.63
117 118 3.554692 CGTTCCGACATGCGCCTC 61.555 66.667 4.18 0.00 39.11 4.70
120 121 2.871427 GATCCGTTCCGACATGCGC 61.871 63.158 0.00 0.00 39.11 6.09
121 122 1.209275 GAGATCCGTTCCGACATGCG 61.209 60.000 0.00 0.00 40.47 4.73
122 123 0.876342 GGAGATCCGTTCCGACATGC 60.876 60.000 0.00 0.00 0.00 4.06
123 124 0.249489 GGGAGATCCGTTCCGACATG 60.249 60.000 0.00 0.00 35.48 3.21
124 125 2.125178 GGGAGATCCGTTCCGACAT 58.875 57.895 0.00 0.00 35.48 3.06
125 126 3.612251 GGGAGATCCGTTCCGACA 58.388 61.111 0.00 0.00 35.48 4.35
180 181 3.909258 TTCTCGCCTCGCCGTCAAC 62.909 63.158 0.00 0.00 0.00 3.18
181 182 3.215597 TTTCTCGCCTCGCCGTCAA 62.216 57.895 0.00 0.00 0.00 3.18
182 183 3.626680 CTTTCTCGCCTCGCCGTCA 62.627 63.158 0.00 0.00 0.00 4.35
183 184 2.881352 CTTTCTCGCCTCGCCGTC 60.881 66.667 0.00 0.00 0.00 4.79
187 188 3.695022 TACCGCTTTCTCGCCTCGC 62.695 63.158 0.00 0.00 0.00 5.03
188 189 1.586564 CTACCGCTTTCTCGCCTCG 60.587 63.158 0.00 0.00 0.00 4.63
189 190 0.248702 CTCTACCGCTTTCTCGCCTC 60.249 60.000 0.00 0.00 0.00 4.70
190 191 1.668101 CCTCTACCGCTTTCTCGCCT 61.668 60.000 0.00 0.00 0.00 5.52
191 192 1.227002 CCTCTACCGCTTTCTCGCC 60.227 63.158 0.00 0.00 0.00 5.54
192 193 1.227002 CCCTCTACCGCTTTCTCGC 60.227 63.158 0.00 0.00 0.00 5.03
193 194 0.382515 CTCCCTCTACCGCTTTCTCG 59.617 60.000 0.00 0.00 0.00 4.04
194 195 0.103390 GCTCCCTCTACCGCTTTCTC 59.897 60.000 0.00 0.00 0.00 2.87
195 196 1.668101 CGCTCCCTCTACCGCTTTCT 61.668 60.000 0.00 0.00 0.00 2.52
196 197 1.227002 CGCTCCCTCTACCGCTTTC 60.227 63.158 0.00 0.00 0.00 2.62
197 198 2.722201 CCGCTCCCTCTACCGCTTT 61.722 63.158 0.00 0.00 0.00 3.51
198 199 3.148279 CCGCTCCCTCTACCGCTT 61.148 66.667 0.00 0.00 0.00 4.68
201 202 4.517934 TCCCCGCTCCCTCTACCG 62.518 72.222 0.00 0.00 0.00 4.02
202 203 2.522193 CTCCCCGCTCCCTCTACC 60.522 72.222 0.00 0.00 0.00 3.18
203 204 1.529713 CTCTCCCCGCTCCCTCTAC 60.530 68.421 0.00 0.00 0.00 2.59
204 205 1.696674 TCTCTCCCCGCTCCCTCTA 60.697 63.158 0.00 0.00 0.00 2.43
205 206 3.024356 TCTCTCCCCGCTCCCTCT 61.024 66.667 0.00 0.00 0.00 3.69
206 207 2.520741 CTCTCTCCCCGCTCCCTC 60.521 72.222 0.00 0.00 0.00 4.30
207 208 4.851214 GCTCTCTCCCCGCTCCCT 62.851 72.222 0.00 0.00 0.00 4.20
214 215 3.535962 CTCTGCCGCTCTCTCCCC 61.536 72.222 0.00 0.00 0.00 4.81
215 216 3.535962 CCTCTGCCGCTCTCTCCC 61.536 72.222 0.00 0.00 0.00 4.30
216 217 3.535962 CCCTCTGCCGCTCTCTCC 61.536 72.222 0.00 0.00 0.00 3.71
217 218 4.219999 GCCCTCTGCCGCTCTCTC 62.220 72.222 0.00 0.00 0.00 3.20
235 236 4.803426 CTCTCCACCTCGCCACGC 62.803 72.222 0.00 0.00 0.00 5.34
236 237 4.803426 GCTCTCCACCTCGCCACG 62.803 72.222 0.00 0.00 0.00 4.94
237 238 4.803426 CGCTCTCCACCTCGCCAC 62.803 72.222 0.00 0.00 0.00 5.01
240 241 4.803426 CACCGCTCTCCACCTCGC 62.803 72.222 0.00 0.00 0.00 5.03
241 242 4.135153 CCACCGCTCTCCACCTCG 62.135 72.222 0.00 0.00 0.00 4.63
242 243 2.232298 CTTCCACCGCTCTCCACCTC 62.232 65.000 0.00 0.00 0.00 3.85
243 244 2.203788 TTCCACCGCTCTCCACCT 60.204 61.111 0.00 0.00 0.00 4.00
244 245 2.266055 CTTCCACCGCTCTCCACC 59.734 66.667 0.00 0.00 0.00 4.61
245 246 2.266055 CCTTCCACCGCTCTCCAC 59.734 66.667 0.00 0.00 0.00 4.02
246 247 3.003173 CCCTTCCACCGCTCTCCA 61.003 66.667 0.00 0.00 0.00 3.86
247 248 4.475135 GCCCTTCCACCGCTCTCC 62.475 72.222 0.00 0.00 0.00 3.71
248 249 4.821589 CGCCCTTCCACCGCTCTC 62.822 72.222 0.00 0.00 0.00 3.20
267 268 1.714899 ATAAATGCAGCGCCCGTCAC 61.715 55.000 2.29 0.00 0.00 3.67
268 269 0.179070 TATAAATGCAGCGCCCGTCA 60.179 50.000 2.29 0.00 0.00 4.35
269 270 0.941542 TTATAAATGCAGCGCCCGTC 59.058 50.000 2.29 0.00 0.00 4.79
270 271 1.333619 CTTTATAAATGCAGCGCCCGT 59.666 47.619 2.29 0.00 0.00 5.28
271 272 1.925946 GCTTTATAAATGCAGCGCCCG 60.926 52.381 2.29 0.00 0.00 6.13
272 273 1.066908 TGCTTTATAAATGCAGCGCCC 59.933 47.619 2.29 0.00 34.82 6.13
273 274 2.490328 TGCTTTATAAATGCAGCGCC 57.510 45.000 2.29 0.00 34.82 6.53
274 275 2.727798 CCATGCTTTATAAATGCAGCGC 59.272 45.455 19.79 0.00 40.18 5.92
275 276 2.727798 GCCATGCTTTATAAATGCAGCG 59.272 45.455 19.79 15.19 40.18 5.18
276 277 2.727798 CGCCATGCTTTATAAATGCAGC 59.272 45.455 19.79 17.64 40.18 5.25
277 278 3.004629 TCCGCCATGCTTTATAAATGCAG 59.995 43.478 19.79 12.52 40.18 4.41
278 279 2.954989 TCCGCCATGCTTTATAAATGCA 59.045 40.909 18.35 18.35 41.13 3.96
279 280 3.308530 GTCCGCCATGCTTTATAAATGC 58.691 45.455 0.00 5.67 0.00 3.56
280 281 3.554524 CGTCCGCCATGCTTTATAAATG 58.445 45.455 0.00 0.00 0.00 2.32
281 282 2.031157 GCGTCCGCCATGCTTTATAAAT 60.031 45.455 0.00 0.00 33.71 1.40
282 283 1.332375 GCGTCCGCCATGCTTTATAAA 59.668 47.619 0.00 0.00 33.71 1.40
283 284 0.941542 GCGTCCGCCATGCTTTATAA 59.058 50.000 0.00 0.00 33.71 0.98
284 285 2.612200 GCGTCCGCCATGCTTTATA 58.388 52.632 0.00 0.00 33.71 0.98
285 286 3.420943 GCGTCCGCCATGCTTTAT 58.579 55.556 0.00 0.00 33.71 1.40
301 302 4.811761 CTAGTTTTGGCGCGCGGC 62.812 66.667 44.34 44.34 42.51 6.53
302 303 4.811761 GCTAGTTTTGGCGCGCGG 62.812 66.667 33.06 13.66 0.00 6.46
308 309 2.741116 TTTGGCGCGCTAGTTTTGGC 62.741 55.000 32.29 11.34 0.00 4.52
309 310 0.318275 TTTTGGCGCGCTAGTTTTGG 60.318 50.000 32.29 0.00 0.00 3.28
310 311 0.775861 GTTTTGGCGCGCTAGTTTTG 59.224 50.000 32.29 0.00 0.00 2.44
311 312 0.666374 AGTTTTGGCGCGCTAGTTTT 59.334 45.000 32.29 10.43 0.00 2.43
312 313 1.463444 CTAGTTTTGGCGCGCTAGTTT 59.537 47.619 32.29 13.94 0.00 2.66
313 314 1.076332 CTAGTTTTGGCGCGCTAGTT 58.924 50.000 32.29 13.58 0.00 2.24
314 315 1.359459 GCTAGTTTTGGCGCGCTAGT 61.359 55.000 32.29 17.94 34.88 2.57
315 316 1.348594 GCTAGTTTTGGCGCGCTAG 59.651 57.895 32.29 22.98 35.35 3.42
316 317 3.481661 GCTAGTTTTGGCGCGCTA 58.518 55.556 32.29 24.64 0.00 4.26
372 373 3.793144 CAGGAAACTCAGGCGCGC 61.793 66.667 25.94 25.94 40.21 6.86
373 374 3.793144 GCAGGAAACTCAGGCGCG 61.793 66.667 0.00 0.00 40.21 6.86
374 375 3.435186 GGCAGGAAACTCAGGCGC 61.435 66.667 0.00 0.00 40.21 6.53
375 376 2.032528 TGGCAGGAAACTCAGGCG 59.967 61.111 0.00 0.00 40.21 5.52
376 377 1.973812 GGTGGCAGGAAACTCAGGC 60.974 63.158 0.00 0.00 40.21 4.85
377 378 1.672356 CGGTGGCAGGAAACTCAGG 60.672 63.158 0.00 0.00 40.21 3.86
378 379 2.328099 GCGGTGGCAGGAAACTCAG 61.328 63.158 0.00 0.00 40.21 3.35
379 380 2.281484 GCGGTGGCAGGAAACTCA 60.281 61.111 0.00 0.00 40.21 3.41
380 381 3.056328 GGCGGTGGCAGGAAACTC 61.056 66.667 0.00 0.00 40.21 3.01
381 382 4.660938 GGGCGGTGGCAGGAAACT 62.661 66.667 0.00 0.00 46.44 2.66
382 383 4.966787 TGGGCGGTGGCAGGAAAC 62.967 66.667 0.00 0.00 42.47 2.78
383 384 4.211330 TTGGGCGGTGGCAGGAAA 62.211 61.111 0.00 0.00 42.47 3.13
384 385 4.966787 GTTGGGCGGTGGCAGGAA 62.967 66.667 0.00 0.00 42.47 3.36
395 396 2.126618 GGTTTTAGCGCGTTGGGC 60.127 61.111 8.43 0.00 41.91 5.36
396 397 2.174835 CGGTTTTAGCGCGTTGGG 59.825 61.111 8.43 0.00 30.39 4.12
403 404 2.251869 GGTAAAAGGCGGTTTTAGCG 57.748 50.000 13.25 0.00 44.79 4.26
405 406 1.469703 CGGGGTAAAAGGCGGTTTTAG 59.530 52.381 3.52 0.00 40.55 1.85
406 407 1.532523 CGGGGTAAAAGGCGGTTTTA 58.467 50.000 0.00 0.00 39.23 1.52
407 408 1.808531 GCGGGGTAAAAGGCGGTTTT 61.809 55.000 1.54 1.54 41.45 2.43
408 409 2.270257 GCGGGGTAAAAGGCGGTTT 61.270 57.895 0.00 0.00 0.00 3.27
409 410 2.674033 GCGGGGTAAAAGGCGGTT 60.674 61.111 0.00 0.00 0.00 4.44
433 434 0.174389 TTCAACAGCAGCCGCAAAAA 59.826 45.000 0.00 0.00 42.27 1.94
434 435 0.248990 CTTCAACAGCAGCCGCAAAA 60.249 50.000 0.00 0.00 42.27 2.44
435 436 1.100463 TCTTCAACAGCAGCCGCAAA 61.100 50.000 0.00 0.00 42.27 3.68
436 437 0.890542 ATCTTCAACAGCAGCCGCAA 60.891 50.000 0.00 0.00 42.27 4.85
437 438 0.036483 TATCTTCAACAGCAGCCGCA 60.036 50.000 0.00 0.00 42.27 5.69
438 439 0.375106 GTATCTTCAACAGCAGCCGC 59.625 55.000 0.00 0.00 38.99 6.53
439 440 1.929836 GAGTATCTTCAACAGCAGCCG 59.070 52.381 0.00 0.00 0.00 5.52
453 454 6.508721 GCGCTTTTGACATCACTTAGAGTATC 60.509 42.308 0.00 0.00 0.00 2.24
454 455 5.292101 GCGCTTTTGACATCACTTAGAGTAT 59.708 40.000 0.00 0.00 0.00 2.12
455 456 4.625742 GCGCTTTTGACATCACTTAGAGTA 59.374 41.667 0.00 0.00 0.00 2.59
456 457 3.433615 GCGCTTTTGACATCACTTAGAGT 59.566 43.478 0.00 0.00 0.00 3.24
457 458 3.681897 AGCGCTTTTGACATCACTTAGAG 59.318 43.478 2.64 0.00 0.00 2.43
458 459 3.664107 AGCGCTTTTGACATCACTTAGA 58.336 40.909 2.64 0.00 0.00 2.10
459 460 5.725110 ATAGCGCTTTTGACATCACTTAG 57.275 39.130 18.68 0.00 0.00 2.18
460 461 7.786178 ATAATAGCGCTTTTGACATCACTTA 57.214 32.000 18.68 0.00 0.00 2.24
461 462 6.683974 ATAATAGCGCTTTTGACATCACTT 57.316 33.333 18.68 0.00 0.00 3.16
462 463 7.969536 ATATAATAGCGCTTTTGACATCACT 57.030 32.000 18.68 0.00 0.00 3.41
467 468 9.267084 TGACATAATATAATAGCGCTTTTGACA 57.733 29.630 18.68 4.89 0.00 3.58
468 469 9.530129 GTGACATAATATAATAGCGCTTTTGAC 57.470 33.333 18.68 2.08 0.00 3.18
469 470 8.432359 CGTGACATAATATAATAGCGCTTTTGA 58.568 33.333 18.68 7.38 0.00 2.69
470 471 7.688167 CCGTGACATAATATAATAGCGCTTTTG 59.312 37.037 18.68 3.32 0.00 2.44
471 472 7.601130 TCCGTGACATAATATAATAGCGCTTTT 59.399 33.333 18.68 17.79 0.00 2.27
472 473 7.094631 TCCGTGACATAATATAATAGCGCTTT 58.905 34.615 18.68 12.61 0.00 3.51
473 474 6.627243 TCCGTGACATAATATAATAGCGCTT 58.373 36.000 18.68 0.00 0.00 4.68
474 475 6.203808 TCCGTGACATAATATAATAGCGCT 57.796 37.500 17.26 17.26 0.00 5.92
475 476 5.459107 CCTCCGTGACATAATATAATAGCGC 59.541 44.000 0.00 0.00 0.00 5.92
476 477 5.977725 CCCTCCGTGACATAATATAATAGCG 59.022 44.000 0.00 0.00 0.00 4.26
477 478 7.108841 TCCCTCCGTGACATAATATAATAGC 57.891 40.000 0.00 0.00 0.00 2.97
478 479 8.294954 ACTCCCTCCGTGACATAATATAATAG 57.705 38.462 0.00 0.00 0.00 1.73
479 480 9.758021 TTACTCCCTCCGTGACATAATATAATA 57.242 33.333 0.00 0.00 0.00 0.98
480 481 8.660295 TTACTCCCTCCGTGACATAATATAAT 57.340 34.615 0.00 0.00 0.00 1.28
481 482 8.481492 TTTACTCCCTCCGTGACATAATATAA 57.519 34.615 0.00 0.00 0.00 0.98
482 483 8.481492 TTTTACTCCCTCCGTGACATAATATA 57.519 34.615 0.00 0.00 0.00 0.86
483 484 6.989155 TTTACTCCCTCCGTGACATAATAT 57.011 37.500 0.00 0.00 0.00 1.28
484 485 6.795144 TTTTACTCCCTCCGTGACATAATA 57.205 37.500 0.00 0.00 0.00 0.98
485 486 5.687166 TTTTACTCCCTCCGTGACATAAT 57.313 39.130 0.00 0.00 0.00 1.28
486 487 5.486735 TTTTTACTCCCTCCGTGACATAA 57.513 39.130 0.00 0.00 0.00 1.90
505 506 3.303990 CGTACTGACTGCATGTGCTTTTT 60.304 43.478 6.55 0.00 42.66 1.94
506 507 2.224079 CGTACTGACTGCATGTGCTTTT 59.776 45.455 6.55 0.00 42.66 2.27
507 508 1.800586 CGTACTGACTGCATGTGCTTT 59.199 47.619 6.55 0.00 42.66 3.51
508 509 1.432514 CGTACTGACTGCATGTGCTT 58.567 50.000 6.55 0.00 42.66 3.91
509 510 1.016130 GCGTACTGACTGCATGTGCT 61.016 55.000 6.55 0.00 42.66 4.40
510 511 1.291184 TGCGTACTGACTGCATGTGC 61.291 55.000 0.00 0.00 42.50 4.57
511 512 0.717784 CTGCGTACTGACTGCATGTG 59.282 55.000 0.00 0.00 35.55 3.21
512 513 0.603065 TCTGCGTACTGACTGCATGT 59.397 50.000 0.00 0.00 35.55 3.21
513 514 0.994995 GTCTGCGTACTGACTGCATG 59.005 55.000 0.00 0.00 40.53 4.06
514 515 0.108615 GGTCTGCGTACTGACTGCAT 60.109 55.000 0.00 0.00 42.61 3.96
515 516 1.179174 AGGTCTGCGTACTGACTGCA 61.179 55.000 9.32 0.00 42.61 4.41
516 517 0.456995 GAGGTCTGCGTACTGACTGC 60.457 60.000 9.32 0.00 42.61 4.40
517 518 1.135546 CAGAGGTCTGCGTACTGACTG 60.136 57.143 0.00 0.00 42.61 3.51
518 519 1.169577 CAGAGGTCTGCGTACTGACT 58.830 55.000 0.00 0.00 42.61 3.41
519 520 3.704381 CAGAGGTCTGCGTACTGAC 57.296 57.895 0.00 0.00 42.36 3.51
537 538 0.451783 CTCAATAAGGTTGCCACGGC 59.548 55.000 0.00 0.00 42.35 5.68
538 539 0.451783 GCTCAATAAGGTTGCCACGG 59.548 55.000 0.00 0.00 0.00 4.94
539 540 1.453155 AGCTCAATAAGGTTGCCACG 58.547 50.000 0.00 0.00 29.11 4.94
540 541 5.183140 TCTTTTAGCTCAATAAGGTTGCCAC 59.817 40.000 0.00 0.00 36.91 5.01
541 542 5.321102 TCTTTTAGCTCAATAAGGTTGCCA 58.679 37.500 0.00 0.00 36.91 4.92
542 543 5.884771 CTCTTTTAGCTCAATAAGGTTGCC 58.115 41.667 0.00 0.00 36.91 4.52
557 558 1.796796 GCCACGGCAGCTCTTTTAG 59.203 57.895 2.36 0.00 41.49 1.85
558 559 3.981308 GCCACGGCAGCTCTTTTA 58.019 55.556 2.36 0.00 41.49 1.52
571 572 4.616181 AGCTCAATAATAACGTTGCCAC 57.384 40.909 11.99 0.00 0.00 5.01
572 573 6.745159 TTTAGCTCAATAATAACGTTGCCA 57.255 33.333 11.99 0.00 0.00 4.92
573 574 7.966204 TCTTTTTAGCTCAATAATAACGTTGCC 59.034 33.333 11.99 0.00 0.00 4.52
574 575 8.889849 TCTTTTTAGCTCAATAATAACGTTGC 57.110 30.769 11.99 2.69 0.00 4.17
575 576 9.000018 GCTCTTTTTAGCTCAATAATAACGTTG 58.000 33.333 11.99 0.00 39.50 4.10
590 591 1.402062 GCAGTGGCAGCTCTTTTTAGC 60.402 52.381 0.00 0.00 43.11 3.09
591 592 1.200948 GGCAGTGGCAGCTCTTTTTAG 59.799 52.381 12.58 0.00 43.71 1.85
592 593 1.247567 GGCAGTGGCAGCTCTTTTTA 58.752 50.000 12.58 0.00 43.71 1.52
593 594 0.756442 TGGCAGTGGCAGCTCTTTTT 60.756 50.000 16.56 0.00 43.71 1.94
594 595 0.541296 ATGGCAGTGGCAGCTCTTTT 60.541 50.000 24.68 3.04 42.43 2.27
595 596 1.076192 ATGGCAGTGGCAGCTCTTT 59.924 52.632 24.68 3.83 42.43 2.52
596 597 1.677966 CATGGCAGTGGCAGCTCTT 60.678 57.895 24.68 4.62 42.43 2.85
597 598 2.045242 CATGGCAGTGGCAGCTCT 60.045 61.111 24.68 5.03 42.43 4.09
598 599 3.138798 CCATGGCAGTGGCAGCTC 61.139 66.667 24.68 0.00 42.43 4.09
609 610 0.463654 TCTCGTTATGGTGCCATGGC 60.464 55.000 30.54 30.54 37.82 4.40
610 611 1.299541 GTCTCGTTATGGTGCCATGG 58.700 55.000 7.63 7.63 37.82 3.66
611 612 1.935873 CTGTCTCGTTATGGTGCCATG 59.064 52.381 13.57 0.00 37.82 3.66
612 613 1.743772 GCTGTCTCGTTATGGTGCCAT 60.744 52.381 8.89 8.89 40.19 4.40
613 614 0.391130 GCTGTCTCGTTATGGTGCCA 60.391 55.000 0.00 0.00 0.00 4.92
614 615 0.391130 TGCTGTCTCGTTATGGTGCC 60.391 55.000 0.00 0.00 0.00 5.01
615 616 0.721718 GTGCTGTCTCGTTATGGTGC 59.278 55.000 0.00 0.00 0.00 5.01
616 617 2.078849 TGTGCTGTCTCGTTATGGTG 57.921 50.000 0.00 0.00 0.00 4.17
617 618 2.037251 ACTTGTGCTGTCTCGTTATGGT 59.963 45.455 0.00 0.00 0.00 3.55
618 619 2.688507 ACTTGTGCTGTCTCGTTATGG 58.311 47.619 0.00 0.00 0.00 2.74
619 620 4.732285 AAACTTGTGCTGTCTCGTTATG 57.268 40.909 0.00 0.00 0.00 1.90
620 621 5.294356 TGTAAACTTGTGCTGTCTCGTTAT 58.706 37.500 0.00 0.00 0.00 1.89
621 622 4.684877 TGTAAACTTGTGCTGTCTCGTTA 58.315 39.130 0.00 0.00 0.00 3.18
622 623 3.527533 TGTAAACTTGTGCTGTCTCGTT 58.472 40.909 0.00 0.00 0.00 3.85
623 624 3.173668 TGTAAACTTGTGCTGTCTCGT 57.826 42.857 0.00 0.00 0.00 4.18
624 625 3.740832 TGATGTAAACTTGTGCTGTCTCG 59.259 43.478 0.00 0.00 0.00 4.04
625 626 5.007626 TGTTGATGTAAACTTGTGCTGTCTC 59.992 40.000 0.00 0.00 0.00 3.36
626 627 4.881273 TGTTGATGTAAACTTGTGCTGTCT 59.119 37.500 0.00 0.00 0.00 3.41
627 628 5.168526 TGTTGATGTAAACTTGTGCTGTC 57.831 39.130 0.00 0.00 0.00 3.51
628 629 5.574891 TTGTTGATGTAAACTTGTGCTGT 57.425 34.783 0.00 0.00 0.00 4.40
629 630 4.442073 GCTTGTTGATGTAAACTTGTGCTG 59.558 41.667 0.00 0.00 0.00 4.41
630 631 4.097741 TGCTTGTTGATGTAAACTTGTGCT 59.902 37.500 0.00 0.00 0.00 4.40
631 632 4.358851 TGCTTGTTGATGTAAACTTGTGC 58.641 39.130 0.00 0.00 0.00 4.57
632 633 6.207928 TGATGCTTGTTGATGTAAACTTGTG 58.792 36.000 0.00 0.00 0.00 3.33
633 634 6.389830 TGATGCTTGTTGATGTAAACTTGT 57.610 33.333 0.00 0.00 0.00 3.16
634 635 5.344128 GCTGATGCTTGTTGATGTAAACTTG 59.656 40.000 0.00 0.00 36.03 3.16
635 636 5.464168 GCTGATGCTTGTTGATGTAAACTT 58.536 37.500 0.00 0.00 36.03 2.66
636 637 5.051891 GCTGATGCTTGTTGATGTAAACT 57.948 39.130 0.00 0.00 36.03 2.66
670 671 2.089980 CAGTCCCCTTGATCTTTGCTG 58.910 52.381 0.00 0.00 0.00 4.41
702 703 4.985409 GCTTATGTATGTTCTTCCCTCTCG 59.015 45.833 0.00 0.00 0.00 4.04
718 719 3.763897 GGTCCAAATCCAACAGCTTATGT 59.236 43.478 0.00 0.00 46.97 2.29
723 724 0.482446 TGGGTCCAAATCCAACAGCT 59.518 50.000 0.00 0.00 0.00 4.24
850 856 3.181480 TGTGTAAAAGGCCAAGCTTGAAC 60.181 43.478 28.05 18.58 0.00 3.18
961 967 1.635663 GCGGGTTGTCTCCACGAATG 61.636 60.000 0.00 0.00 0.00 2.67
965 971 3.271706 TACGCGGGTTGTCTCCACG 62.272 63.158 11.50 0.00 35.63 4.94
967 973 2.652530 GTACGCGGGTTGTCTCCA 59.347 61.111 11.50 0.00 0.00 3.86
1338 1367 2.047274 ATGGCGAACGACCACAGG 60.047 61.111 11.07 0.00 40.82 4.00
1359 1388 1.153489 CGACATGCTCACCAGGAGG 60.153 63.158 0.00 0.00 44.22 4.30
1552 1618 1.950216 GCTTGTATTAGCAGAAGCCCC 59.050 52.381 0.00 0.00 43.56 5.80
1562 1628 2.865343 AGACGACGGGCTTGTATTAG 57.135 50.000 0.00 0.00 0.00 1.73
1582 1648 1.540435 GCCCAATCCAAGGCCGAAAA 61.540 55.000 0.00 0.00 43.76 2.29
1680 1784 3.724374 GAATCCATTTCCCATACGACGA 58.276 45.455 0.00 0.00 0.00 4.20
1708 1812 9.784531 TCAGATCAGTCTTCTTATTTTGTTCTT 57.215 29.630 0.00 0.00 30.42 2.52
1759 1863 9.581289 TTTTTAATTCCCTGACATGTAAAGAGA 57.419 29.630 0.00 0.00 0.00 3.10
1770 1874 9.626045 CTGTTCTTGTATTTTTAATTCCCTGAC 57.374 33.333 0.00 0.00 0.00 3.51
1771 1875 9.581289 TCTGTTCTTGTATTTTTAATTCCCTGA 57.419 29.630 0.00 0.00 0.00 3.86
1858 1962 2.256117 ATTGACCTAATAGCGGTGGC 57.744 50.000 0.00 0.00 34.19 5.01
1859 1963 6.877611 ATTAAATTGACCTAATAGCGGTGG 57.122 37.500 0.00 0.00 34.19 4.61
1900 2004 4.571984 GCCAGTGCTTTTTGACAGAAAAAT 59.428 37.500 0.00 0.00 33.53 1.82
1942 2046 7.282585 TGATTACTAAGCCATCAGTGCTTTAT 58.717 34.615 2.55 0.00 46.47 1.40
1951 2055 2.434336 ACGCCTGATTACTAAGCCATCA 59.566 45.455 0.00 0.00 0.00 3.07
1958 2062 3.428452 CGAGGTCAACGCCTGATTACTAA 60.428 47.826 0.00 0.00 39.34 2.24
1997 2101 1.677552 CCAACTCAGCCTAACGGGT 59.322 57.895 0.00 0.00 43.12 5.28
1998 2102 1.745489 GCCAACTCAGCCTAACGGG 60.745 63.158 0.00 0.00 38.36 5.28
1999 2103 0.605319 TTGCCAACTCAGCCTAACGG 60.605 55.000 0.00 0.00 0.00 4.44
2000 2104 1.453155 ATTGCCAACTCAGCCTAACG 58.547 50.000 0.00 0.00 0.00 3.18
2001 2105 6.672147 CATTATATTGCCAACTCAGCCTAAC 58.328 40.000 0.00 0.00 0.00 2.34
2002 2106 5.241506 GCATTATATTGCCAACTCAGCCTAA 59.758 40.000 8.16 0.00 36.60 2.69
2004 2108 3.571401 GCATTATATTGCCAACTCAGCCT 59.429 43.478 8.16 0.00 36.60 4.58
2005 2109 3.905784 GCATTATATTGCCAACTCAGCC 58.094 45.455 8.16 0.00 36.60 4.85
2016 2120 4.319046 GCTCTCACGTGTGGCATTATATTG 60.319 45.833 16.51 0.00 0.00 1.90
2019 2123 2.167487 TGCTCTCACGTGTGGCATTATA 59.833 45.455 21.64 6.75 0.00 0.98
2040 2144 0.915364 GAGAAGGGGCAGATGGTTCT 59.085 55.000 0.00 0.00 0.00 3.01
2041 2145 0.915364 AGAGAAGGGGCAGATGGTTC 59.085 55.000 0.00 0.00 0.00 3.62
2042 2146 0.915364 GAGAGAAGGGGCAGATGGTT 59.085 55.000 0.00 0.00 0.00 3.67
2045 2149 0.388659 CGAGAGAGAAGGGGCAGATG 59.611 60.000 0.00 0.00 0.00 2.90
2046 2150 0.032615 ACGAGAGAGAAGGGGCAGAT 60.033 55.000 0.00 0.00 0.00 2.90
2047 2151 0.967887 CACGAGAGAGAAGGGGCAGA 60.968 60.000 0.00 0.00 0.00 4.26
2048 2152 1.515020 CACGAGAGAGAAGGGGCAG 59.485 63.158 0.00 0.00 0.00 4.85
2049 2153 2.650116 GCACGAGAGAGAAGGGGCA 61.650 63.158 0.00 0.00 0.00 5.36
2050 2154 1.965754 ATGCACGAGAGAGAAGGGGC 61.966 60.000 0.00 0.00 0.00 5.80
2051 2155 0.539051 AATGCACGAGAGAGAAGGGG 59.461 55.000 0.00 0.00 0.00 4.79
2055 2159 3.377172 TCGACATAATGCACGAGAGAGAA 59.623 43.478 0.00 0.00 0.00 2.87
2060 2166 1.134175 TGCTCGACATAATGCACGAGA 59.866 47.619 21.91 7.85 44.19 4.04
2092 2198 0.107459 GCTTGGAGGAGGTGATGACC 60.107 60.000 0.00 0.00 43.52 4.02
2094 2200 1.274703 GGGCTTGGAGGAGGTGATGA 61.275 60.000 0.00 0.00 0.00 2.92
2109 2215 2.348888 CGTAGGGTCGTCTTGGGCT 61.349 63.158 0.00 0.00 0.00 5.19
2123 2229 4.710695 TGGTGGCACGACGCGTAG 62.711 66.667 13.97 16.40 43.84 3.51
2124 2230 4.281947 TTGGTGGCACGACGCGTA 62.282 61.111 13.97 0.00 43.84 4.42
2137 2243 2.124507 CTCCCACATCCACCGTTGGT 62.125 60.000 0.00 0.00 44.35 3.67
2138 2244 1.377202 CTCCCACATCCACCGTTGG 60.377 63.158 0.00 0.00 45.56 3.77
2139 2245 0.250727 AACTCCCACATCCACCGTTG 60.251 55.000 0.00 0.00 0.00 4.10
2140 2246 0.036306 GAACTCCCACATCCACCGTT 59.964 55.000 0.00 0.00 0.00 4.44
2141 2247 0.836400 AGAACTCCCACATCCACCGT 60.836 55.000 0.00 0.00 0.00 4.83
2142 2248 0.324943 AAGAACTCCCACATCCACCG 59.675 55.000 0.00 0.00 0.00 4.94
2143 2249 3.933861 ATAAGAACTCCCACATCCACC 57.066 47.619 0.00 0.00 0.00 4.61
2144 2250 4.816925 GCTAATAAGAACTCCCACATCCAC 59.183 45.833 0.00 0.00 0.00 4.02
2145 2251 4.141482 GGCTAATAAGAACTCCCACATCCA 60.141 45.833 0.00 0.00 0.00 3.41
2146 2252 4.141482 TGGCTAATAAGAACTCCCACATCC 60.141 45.833 0.00 0.00 0.00 3.51
2147 2253 4.816925 GTGGCTAATAAGAACTCCCACATC 59.183 45.833 0.00 0.00 40.60 3.06
2148 2254 4.683400 CGTGGCTAATAAGAACTCCCACAT 60.683 45.833 7.56 0.00 40.86 3.21
2149 2255 3.369052 CGTGGCTAATAAGAACTCCCACA 60.369 47.826 7.56 0.00 40.86 4.17
2150 2256 3.195661 CGTGGCTAATAAGAACTCCCAC 58.804 50.000 0.00 0.00 38.25 4.61
2151 2257 2.419574 GCGTGGCTAATAAGAACTCCCA 60.420 50.000 0.00 0.00 0.00 4.37
2152 2258 2.158943 AGCGTGGCTAATAAGAACTCCC 60.159 50.000 0.00 0.00 36.99 4.30
2153 2259 3.180891 AGCGTGGCTAATAAGAACTCC 57.819 47.619 0.00 0.00 36.99 3.85
2154 2260 5.175856 CACATAGCGTGGCTAATAAGAACTC 59.824 44.000 0.96 0.00 44.62 3.01
2155 2261 5.050490 CACATAGCGTGGCTAATAAGAACT 58.950 41.667 0.96 0.00 44.62 3.01
2156 2262 4.318831 GCACATAGCGTGGCTAATAAGAAC 60.319 45.833 0.96 0.00 44.62 3.01
2157 2263 3.807622 GCACATAGCGTGGCTAATAAGAA 59.192 43.478 0.96 0.00 44.62 2.52
2158 2264 3.390135 GCACATAGCGTGGCTAATAAGA 58.610 45.455 0.96 0.00 44.62 2.10
2159 2265 3.795561 GCACATAGCGTGGCTAATAAG 57.204 47.619 0.96 0.00 44.62 1.73
2172 2278 1.124462 GCTCGAACGCTAGCACATAG 58.876 55.000 16.45 6.16 38.63 2.23
2173 2279 0.248907 GGCTCGAACGCTAGCACATA 60.249 55.000 16.45 0.00 40.61 2.29
2174 2280 1.519455 GGCTCGAACGCTAGCACAT 60.519 57.895 16.45 0.00 40.61 3.21
2175 2281 2.126071 GGCTCGAACGCTAGCACA 60.126 61.111 16.45 0.00 40.61 4.57
2176 2282 2.126071 TGGCTCGAACGCTAGCAC 60.126 61.111 16.45 4.55 40.61 4.40
2177 2283 2.181777 CTGGCTCGAACGCTAGCA 59.818 61.111 16.45 0.00 40.61 3.49
2178 2284 1.587613 CTCTGGCTCGAACGCTAGC 60.588 63.158 4.06 4.06 38.26 3.42
2179 2285 1.587613 GCTCTGGCTCGAACGCTAG 60.588 63.158 3.93 3.93 39.55 3.42
2180 2286 2.490217 GCTCTGGCTCGAACGCTA 59.510 61.111 0.00 0.00 35.22 4.26
2181 2287 4.785512 CGCTCTGGCTCGAACGCT 62.786 66.667 0.00 0.00 36.09 5.07
2184 2290 3.482783 GTGCGCTCTGGCTCGAAC 61.483 66.667 9.73 0.00 36.09 3.95
2185 2291 4.742201 GGTGCGCTCTGGCTCGAA 62.742 66.667 9.73 0.00 36.09 3.71
2188 2294 4.828925 GGAGGTGCGCTCTGGCTC 62.829 72.222 9.73 7.30 36.09 4.70
2190 2296 4.828925 GAGGAGGTGCGCTCTGGC 62.829 72.222 9.73 0.00 0.00 4.85
2191 2297 4.154347 GGAGGAGGTGCGCTCTGG 62.154 72.222 9.73 0.00 0.00 3.86
2192 2298 4.154347 GGGAGGAGGTGCGCTCTG 62.154 72.222 9.73 0.00 0.00 3.35
2237 2343 3.835790 TAACAGGGTGTGTGCCGCC 62.836 63.158 0.00 0.00 40.26 6.13
2238 2344 1.241315 AATAACAGGGTGTGTGCCGC 61.241 55.000 0.00 0.00 40.26 6.53
2239 2345 1.199097 GAAATAACAGGGTGTGTGCCG 59.801 52.381 0.00 0.00 40.26 5.69
2240 2346 1.544246 GGAAATAACAGGGTGTGTGCC 59.456 52.381 0.00 0.00 40.26 5.01
2241 2347 2.235016 TGGAAATAACAGGGTGTGTGC 58.765 47.619 0.00 0.00 40.26 4.57
2242 2348 5.010516 TGAAATGGAAATAACAGGGTGTGTG 59.989 40.000 0.00 0.00 40.26 3.82
2243 2349 5.144100 TGAAATGGAAATAACAGGGTGTGT 58.856 37.500 0.00 0.00 43.24 3.72
2244 2350 5.720371 TGAAATGGAAATAACAGGGTGTG 57.280 39.130 0.00 0.00 0.00 3.82
2245 2351 6.933514 AATGAAATGGAAATAACAGGGTGT 57.066 33.333 0.00 0.00 0.00 4.16
2246 2352 8.620116 AAAAATGAAATGGAAATAACAGGGTG 57.380 30.769 0.00 0.00 0.00 4.61
2292 2398 9.547753 TCGAATTTTTGTTGAAATCCCAAATTA 57.452 25.926 0.00 0.00 0.00 1.40
2293 2399 8.443953 TCGAATTTTTGTTGAAATCCCAAATT 57.556 26.923 0.00 0.00 0.00 1.82
2294 2400 8.443953 TTCGAATTTTTGTTGAAATCCCAAAT 57.556 26.923 0.00 0.00 0.00 2.32
2295 2401 7.849804 TTCGAATTTTTGTTGAAATCCCAAA 57.150 28.000 0.00 0.00 0.00 3.28
2296 2402 7.849804 TTTCGAATTTTTGTTGAAATCCCAA 57.150 28.000 0.00 0.00 0.00 4.12
2297 2403 7.849804 TTTTCGAATTTTTGTTGAAATCCCA 57.150 28.000 0.00 0.00 0.00 4.37
2341 2447 9.654417 CCAAAAACATTTCATGATTTCTTGAAC 57.346 29.630 0.00 0.00 38.97 3.18
2342 2448 9.610705 TCCAAAAACATTTCATGATTTCTTGAA 57.389 25.926 0.00 5.14 34.70 2.69
2343 2449 9.781633 ATCCAAAAACATTTCATGATTTCTTGA 57.218 25.926 0.00 0.00 34.70 3.02
2428 2534 8.818141 TTGTGAGTTTTGTGAACATTTACAAA 57.182 26.923 9.82 9.82 42.96 2.83
2429 2535 8.300286 TCTTGTGAGTTTTGTGAACATTTACAA 58.700 29.630 0.00 0.00 35.20 2.41
2430 2536 7.821652 TCTTGTGAGTTTTGTGAACATTTACA 58.178 30.769 0.00 0.00 0.00 2.41
2431 2537 8.745837 CATCTTGTGAGTTTTGTGAACATTTAC 58.254 33.333 0.00 0.00 0.00 2.01
2432 2538 8.681806 TCATCTTGTGAGTTTTGTGAACATTTA 58.318 29.630 0.00 0.00 31.80 1.40
2433 2539 7.546358 TCATCTTGTGAGTTTTGTGAACATTT 58.454 30.769 0.00 0.00 31.80 2.32
2434 2540 7.099266 TCATCTTGTGAGTTTTGTGAACATT 57.901 32.000 0.00 0.00 31.80 2.71
2435 2541 6.698008 TCATCTTGTGAGTTTTGTGAACAT 57.302 33.333 0.00 0.00 31.80 2.71
2436 2542 6.698008 ATCATCTTGTGAGTTTTGTGAACA 57.302 33.333 0.00 0.00 40.92 3.18
2437 2543 7.377928 CAGAATCATCTTGTGAGTTTTGTGAAC 59.622 37.037 0.00 0.00 40.92 3.18
2438 2544 7.282901 TCAGAATCATCTTGTGAGTTTTGTGAA 59.717 33.333 0.00 0.00 40.92 3.18
2439 2545 6.767423 TCAGAATCATCTTGTGAGTTTTGTGA 59.233 34.615 0.00 0.00 40.92 3.58
2440 2546 6.962686 TCAGAATCATCTTGTGAGTTTTGTG 58.037 36.000 0.00 0.00 40.92 3.33
2441 2547 7.572523 TTCAGAATCATCTTGTGAGTTTTGT 57.427 32.000 0.00 0.00 40.92 2.83
2444 2550 9.288576 TGTAATTCAGAATCATCTTGTGAGTTT 57.711 29.630 0.00 0.00 40.92 2.66
2445 2551 8.853077 TGTAATTCAGAATCATCTTGTGAGTT 57.147 30.769 0.00 0.00 40.92 3.01
2446 2552 8.853077 TTGTAATTCAGAATCATCTTGTGAGT 57.147 30.769 0.00 0.00 40.92 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.