Multiple sequence alignment - TraesCS2D01G313900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G313900 chr2D 100.000 2618 0 0 1 2618 403487313 403484696 0.000000e+00 4835
1 TraesCS2D01G313900 chr2D 86.257 342 28 5 2294 2618 83534595 83534256 1.150000e-93 353
2 TraesCS2D01G313900 chr2D 92.105 190 11 4 2429 2618 81639051 81638866 5.560000e-67 265
3 TraesCS2D01G313900 chr2D 79.300 343 42 16 2294 2617 104917814 104917482 2.040000e-51 213
4 TraesCS2D01G313900 chr2B 88.608 1975 88 43 1 1895 477596974 477595057 0.000000e+00 2274
5 TraesCS2D01G313900 chr2B 84.823 817 68 16 466 1255 574921919 574922706 0.000000e+00 771
6 TraesCS2D01G313900 chr2B 80.814 344 39 14 2294 2618 51675055 51674720 7.240000e-61 244
7 TraesCS2D01G313900 chr2A 91.888 1467 53 18 465 1895 541837452 541836016 0.000000e+00 1989
8 TraesCS2D01G313900 chr2A 84.173 417 24 9 1 390 541837927 541837526 1.480000e-97 366
9 TraesCS2D01G313900 chr4B 85.504 814 63 18 469 1255 351297538 351296753 0.000000e+00 798
10 TraesCS2D01G313900 chr4B 88.330 437 29 9 473 905 257300444 257300862 3.010000e-139 505
11 TraesCS2D01G313900 chr4B 89.105 257 28 0 995 1251 257344416 257344672 1.170000e-83 320
12 TraesCS2D01G313900 chr5D 86.782 348 41 5 1951 2294 67871704 67871358 1.470000e-102 383
13 TraesCS2D01G313900 chr3D 86.628 344 34 9 1955 2292 72042452 72042115 1.140000e-98 370
14 TraesCS2D01G313900 chr3D 84.751 341 26 10 2294 2618 72042477 72042147 4.200000e-83 318
15 TraesCS2D01G313900 chr7D 87.539 321 36 4 1985 2302 9163447 9163766 4.120000e-98 368
16 TraesCS2D01G313900 chr7D 83.841 328 40 9 1952 2271 24930086 24930408 1.520000e-77 300
17 TraesCS2D01G313900 chr1D 86.310 336 28 9 2294 2617 256176881 256177210 1.490000e-92 350
18 TraesCS2D01G313900 chr4A 85.387 349 36 11 1955 2292 629300239 629299895 5.360000e-92 348
19 TraesCS2D01G313900 chr4A 79.167 336 48 16 2294 2618 710206337 710206013 2.040000e-51 213
20 TraesCS2D01G313900 chr6A 86.335 322 27 13 1977 2292 597748109 597747799 4.170000e-88 335
21 TraesCS2D01G313900 chr6A 84.211 304 27 12 2326 2618 597748124 597747831 2.570000e-70 276
22 TraesCS2D01G313900 chr6D 84.527 349 41 12 1952 2294 140017638 140017979 1.500000e-87 333
23 TraesCS2D01G313900 chr7A 83.976 337 45 9 1955 2287 139787625 139787956 5.440000e-82 315
24 TraesCS2D01G313900 chr3A 83.333 354 40 14 1952 2294 744398503 744398848 2.530000e-80 309
25 TraesCS2D01G313900 chr3A 81.948 349 43 16 1957 2294 717009471 717009810 7.140000e-71 278
26 TraesCS2D01G313900 chr3A 79.646 339 44 14 2293 2615 717009443 717009772 1.220000e-53 220
27 TraesCS2D01G313900 chr3B 82.730 359 46 7 1952 2294 2277015 2277373 3.270000e-79 305
28 TraesCS2D01G313900 chr1B 82.997 347 47 10 1951 2294 533813341 533813004 1.180000e-78 303
29 TraesCS2D01G313900 chr5A 83.086 337 34 12 2294 2618 677177044 677177369 4.260000e-73 285


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G313900 chr2D 403484696 403487313 2617 True 4835.0 4835 100.0000 1 2618 1 chr2D.!!$R4 2617
1 TraesCS2D01G313900 chr2B 477595057 477596974 1917 True 2274.0 2274 88.6080 1 1895 1 chr2B.!!$R2 1894
2 TraesCS2D01G313900 chr2B 574921919 574922706 787 False 771.0 771 84.8230 466 1255 1 chr2B.!!$F1 789
3 TraesCS2D01G313900 chr2A 541836016 541837927 1911 True 1177.5 1989 88.0305 1 1895 2 chr2A.!!$R1 1894
4 TraesCS2D01G313900 chr4B 351296753 351297538 785 True 798.0 798 85.5040 469 1255 1 chr4B.!!$R1 786

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
862 946 0.800012 TTGATCGCTTTACAACCGCC 59.2 50.0 0.0 0.0 0.0 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2235 2374 0.028505 CTATGCCATGTGACGCAAGC 59.971 55.0 7.29 7.29 45.62 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.429141 CACCGAGCAAGCTGGCTG 61.429 66.667 23.53 9.93 45.99 4.85
78 82 2.279918 ACCACACGCGAACACTCC 60.280 61.111 15.93 0.00 0.00 3.85
149 164 2.034221 ACGGAAAAGCAGAGGGGC 59.966 61.111 0.00 0.00 0.00 5.80
194 209 3.677700 GCTGCTTGATTGAATGATTGGCA 60.678 43.478 0.00 0.00 0.00 4.92
195 210 3.852286 TGCTTGATTGAATGATTGGCAC 58.148 40.909 0.00 0.00 0.00 5.01
196 211 2.855963 GCTTGATTGAATGATTGGCACG 59.144 45.455 0.00 0.00 0.00 5.34
197 212 3.441163 CTTGATTGAATGATTGGCACGG 58.559 45.455 0.00 0.00 0.00 4.94
198 213 2.445427 TGATTGAATGATTGGCACGGT 58.555 42.857 0.00 0.00 0.00 4.83
199 214 2.164017 TGATTGAATGATTGGCACGGTG 59.836 45.455 3.15 3.15 0.00 4.94
200 215 0.887247 TTGAATGATTGGCACGGTGG 59.113 50.000 10.60 0.00 0.00 4.61
201 216 1.139520 GAATGATTGGCACGGTGGC 59.860 57.895 25.93 25.93 44.03 5.01
280 302 6.561519 TTCCCCTGTCTCCTCTTTAATTAG 57.438 41.667 0.00 0.00 0.00 1.73
281 303 4.409247 TCCCCTGTCTCCTCTTTAATTAGC 59.591 45.833 0.00 0.00 0.00 3.09
283 305 4.164221 CCCTGTCTCCTCTTTAATTAGCCA 59.836 45.833 0.00 0.00 0.00 4.75
285 307 5.129485 CCTGTCTCCTCTTTAATTAGCCAGA 59.871 44.000 0.00 0.00 0.00 3.86
301 326 1.691482 CCAGAAGTCGGATTAGGGGGA 60.691 57.143 0.00 0.00 0.00 4.81
311 336 2.979678 GGATTAGGGGGAGTGCTAATCA 59.020 50.000 4.56 0.00 39.32 2.57
343 374 4.319261 GGGATTTCAAACACGTGTCACTAC 60.319 45.833 23.61 10.19 0.00 2.73
550 632 4.468713 TGGCTGCTGTAATTATGGCATAA 58.531 39.130 21.28 21.28 34.12 1.90
551 633 4.520111 TGGCTGCTGTAATTATGGCATAAG 59.480 41.667 23.01 11.57 34.12 1.73
552 634 4.520492 GGCTGCTGTAATTATGGCATAAGT 59.480 41.667 23.01 22.48 34.12 2.24
553 635 5.705441 GGCTGCTGTAATTATGGCATAAGTA 59.295 40.000 23.01 21.50 34.12 2.24
554 636 6.128172 GGCTGCTGTAATTATGGCATAAGTAG 60.128 42.308 23.30 18.10 34.12 2.57
555 637 6.650807 GCTGCTGTAATTATGGCATAAGTAGA 59.349 38.462 23.30 21.15 34.12 2.59
556 638 7.148507 GCTGCTGTAATTATGGCATAAGTAGAG 60.149 40.741 31.26 31.26 38.74 2.43
728 812 3.788672 CTGGTTAGGGGACAGCATC 57.211 57.895 0.00 0.00 0.00 3.91
862 946 0.800012 TTGATCGCTTTACAACCGCC 59.200 50.000 0.00 0.00 0.00 6.13
905 997 3.931907 TGCCCATGCATCTTACTACTT 57.068 42.857 0.00 0.00 44.23 2.24
927 1019 8.631275 ACTTACTACTACTACTACCCTTACCT 57.369 38.462 0.00 0.00 0.00 3.08
930 1022 6.657875 ACTACTACTACTACCCTTACCTGTG 58.342 44.000 0.00 0.00 0.00 3.66
1040 1160 3.036783 GCAAGCTGCGGCAGAAGAG 62.037 63.158 32.72 18.58 41.70 2.85
1149 1269 3.175240 CGGCTCAGCGTGTCTTCG 61.175 66.667 0.00 0.00 0.00 3.79
1152 1272 2.089349 GCTCAGCGTGTCTTCGTCC 61.089 63.158 0.00 0.00 0.00 4.79
1247 1367 2.124403 GAGGCTGCAGTCCATGGG 60.124 66.667 23.46 0.00 0.00 4.00
1369 1498 4.577246 GCGGCTGCTACGAGAGGG 62.577 72.222 11.21 0.00 38.39 4.30
1431 1560 4.083862 GCCGTGGACAGGAGGACC 62.084 72.222 0.00 0.00 0.00 4.46
1624 1753 0.827507 TTGCAAGGGTTGAAGAGGCC 60.828 55.000 0.00 0.00 0.00 5.19
1644 1780 1.245376 TACTGTCGTCCATGTCCGCA 61.245 55.000 0.00 0.00 0.00 5.69
1691 1827 1.234615 CGCAACGGGGAAGTGTGATT 61.235 55.000 0.00 0.00 0.00 2.57
1697 1833 4.829872 ACGGGGAAGTGTGATTGTATTA 57.170 40.909 0.00 0.00 0.00 0.98
1832 1968 8.841444 ATTTCGCTGTTTGTTATGTTGATATC 57.159 30.769 0.00 0.00 0.00 1.63
1838 1976 7.426456 GCTGTTTGTTATGTTGATATCTGAACG 59.574 37.037 3.98 0.00 0.00 3.95
1844 1982 7.870954 TGTTATGTTGATATCTGAACGTATCCC 59.129 37.037 3.98 0.64 0.00 3.85
1865 2003 3.441572 CCCAGTTCAGATGTGGATTTCAC 59.558 47.826 0.71 0.00 46.23 3.18
1895 2034 5.048782 GTGATGCAAGGTCAACATTGAGTTA 60.049 40.000 11.38 0.00 39.74 2.24
1896 2035 5.711506 TGATGCAAGGTCAACATTGAGTTAT 59.288 36.000 11.38 0.57 39.74 1.89
1897 2036 5.375417 TGCAAGGTCAACATTGAGTTATG 57.625 39.130 11.38 0.00 39.74 1.90
1898 2037 4.168760 GCAAGGTCAACATTGAGTTATGC 58.831 43.478 11.38 1.01 39.74 3.14
1899 2038 4.737054 CAAGGTCAACATTGAGTTATGCC 58.263 43.478 1.45 0.00 39.74 4.40
1900 2039 3.009723 AGGTCAACATTGAGTTATGCCG 58.990 45.455 0.00 0.00 38.74 5.69
1901 2040 2.097466 GGTCAACATTGAGTTATGCCGG 59.903 50.000 0.00 0.00 38.74 6.13
1902 2041 1.742831 TCAACATTGAGTTATGCCGGC 59.257 47.619 22.73 22.73 38.74 6.13
1903 2042 1.472082 CAACATTGAGTTATGCCGGCA 59.528 47.619 34.80 34.80 38.74 5.69
1904 2043 2.057137 ACATTGAGTTATGCCGGCAT 57.943 45.000 41.28 41.28 40.19 4.40
1905 2044 3.207265 ACATTGAGTTATGCCGGCATA 57.793 42.857 39.01 39.01 37.82 3.14
1906 2045 2.878406 ACATTGAGTTATGCCGGCATAC 59.122 45.455 41.62 33.54 38.48 2.39
1907 2046 2.700722 TTGAGTTATGCCGGCATACA 57.299 45.000 41.62 33.19 38.48 2.29
1908 2047 1.948104 TGAGTTATGCCGGCATACAC 58.052 50.000 41.62 36.02 38.48 2.90
1909 2048 1.208293 TGAGTTATGCCGGCATACACA 59.792 47.619 41.62 34.32 38.48 3.72
1910 2049 2.158827 TGAGTTATGCCGGCATACACAT 60.159 45.455 41.62 28.48 38.48 3.21
1911 2050 2.480419 GAGTTATGCCGGCATACACATC 59.520 50.000 41.62 30.87 38.48 3.06
1912 2051 1.535462 GTTATGCCGGCATACACATCC 59.465 52.381 41.62 23.32 38.48 3.51
1913 2052 0.761802 TATGCCGGCATACACATCCA 59.238 50.000 39.01 21.27 37.82 3.41
1914 2053 0.111061 ATGCCGGCATACACATCCAT 59.889 50.000 39.91 13.67 34.49 3.41
1915 2054 0.818852 TGCCGGCATACACATCCATG 60.819 55.000 29.03 0.00 0.00 3.66
1916 2055 0.534877 GCCGGCATACACATCCATGA 60.535 55.000 24.80 0.00 0.00 3.07
1917 2056 1.965935 CCGGCATACACATCCATGAA 58.034 50.000 0.00 0.00 0.00 2.57
1918 2057 2.507484 CCGGCATACACATCCATGAAT 58.493 47.619 0.00 0.00 0.00 2.57
1919 2058 3.673902 CCGGCATACACATCCATGAATA 58.326 45.455 0.00 0.00 0.00 1.75
1920 2059 3.436704 CCGGCATACACATCCATGAATAC 59.563 47.826 0.00 0.00 0.00 1.89
1921 2060 4.064388 CGGCATACACATCCATGAATACA 58.936 43.478 0.00 0.00 0.00 2.29
1922 2061 4.083855 CGGCATACACATCCATGAATACAC 60.084 45.833 0.00 0.00 0.00 2.90
1923 2062 4.083855 GGCATACACATCCATGAATACACG 60.084 45.833 0.00 0.00 0.00 4.49
1924 2063 4.749598 GCATACACATCCATGAATACACGA 59.250 41.667 0.00 0.00 0.00 4.35
1925 2064 5.333339 GCATACACATCCATGAATACACGAC 60.333 44.000 0.00 0.00 0.00 4.34
1926 2065 3.531538 ACACATCCATGAATACACGACC 58.468 45.455 0.00 0.00 0.00 4.79
1927 2066 3.197766 ACACATCCATGAATACACGACCT 59.802 43.478 0.00 0.00 0.00 3.85
1928 2067 4.404394 ACACATCCATGAATACACGACCTA 59.596 41.667 0.00 0.00 0.00 3.08
1929 2068 4.984785 CACATCCATGAATACACGACCTAG 59.015 45.833 0.00 0.00 0.00 3.02
1930 2069 3.728076 TCCATGAATACACGACCTAGC 57.272 47.619 0.00 0.00 0.00 3.42
1931 2070 3.028130 TCCATGAATACACGACCTAGCA 58.972 45.455 0.00 0.00 0.00 3.49
1932 2071 3.641436 TCCATGAATACACGACCTAGCAT 59.359 43.478 0.00 0.00 0.00 3.79
1933 2072 4.100963 TCCATGAATACACGACCTAGCATT 59.899 41.667 0.00 0.00 0.00 3.56
1934 2073 5.303333 TCCATGAATACACGACCTAGCATTA 59.697 40.000 0.00 0.00 0.00 1.90
1935 2074 5.989168 CCATGAATACACGACCTAGCATTAA 59.011 40.000 0.00 0.00 0.00 1.40
1936 2075 6.650807 CCATGAATACACGACCTAGCATTAAT 59.349 38.462 0.00 0.00 0.00 1.40
1937 2076 7.817478 CCATGAATACACGACCTAGCATTAATA 59.183 37.037 0.00 0.00 0.00 0.98
1938 2077 9.203421 CATGAATACACGACCTAGCATTAATAA 57.797 33.333 0.00 0.00 0.00 1.40
1939 2078 9.944376 ATGAATACACGACCTAGCATTAATAAT 57.056 29.630 0.00 0.00 0.00 1.28
1940 2079 9.772973 TGAATACACGACCTAGCATTAATAATT 57.227 29.630 0.00 0.00 0.00 1.40
1954 2093 9.131791 AGCATTAATAATTTACTAGTGGTTGGG 57.868 33.333 5.39 0.00 0.00 4.12
1955 2094 8.357402 GCATTAATAATTTACTAGTGGTTGGGG 58.643 37.037 5.39 0.00 0.00 4.96
1956 2095 7.885009 TTAATAATTTACTAGTGGTTGGGGC 57.115 36.000 5.39 0.00 0.00 5.80
1957 2096 2.413310 ATTTACTAGTGGTTGGGGCG 57.587 50.000 5.39 0.00 0.00 6.13
1958 2097 0.321830 TTTACTAGTGGTTGGGGCGC 60.322 55.000 5.39 0.00 0.00 6.53
1959 2098 2.187896 TTACTAGTGGTTGGGGCGCC 62.188 60.000 21.18 21.18 0.00 6.53
1960 2099 4.028490 CTAGTGGTTGGGGCGCCA 62.028 66.667 30.85 20.22 0.00 5.69
1964 2103 3.571216 TGGTTGGGGCGCCACTTA 61.571 61.111 32.18 15.72 0.00 2.24
1965 2104 2.282603 GGTTGGGGCGCCACTTAA 60.283 61.111 32.18 14.75 0.00 1.85
1966 2105 1.904378 GGTTGGGGCGCCACTTAAA 60.904 57.895 32.18 13.87 0.00 1.52
1967 2106 1.465200 GGTTGGGGCGCCACTTAAAA 61.465 55.000 32.18 13.43 0.00 1.52
1968 2107 0.038618 GTTGGGGCGCCACTTAAAAG 60.039 55.000 32.18 0.00 0.00 2.27
1969 2108 0.178987 TTGGGGCGCCACTTAAAAGA 60.179 50.000 32.18 3.82 0.00 2.52
1970 2109 0.178987 TGGGGCGCCACTTAAAAGAA 60.179 50.000 32.18 2.87 0.00 2.52
1971 2110 0.963225 GGGGCGCCACTTAAAAGAAA 59.037 50.000 30.85 0.00 0.00 2.52
1972 2111 1.067846 GGGGCGCCACTTAAAAGAAAG 60.068 52.381 30.85 0.00 0.00 2.62
1973 2112 1.611977 GGGCGCCACTTAAAAGAAAGT 59.388 47.619 30.85 0.00 40.33 2.66
1974 2113 2.035449 GGGCGCCACTTAAAAGAAAGTT 59.965 45.455 30.85 0.00 37.61 2.66
1975 2114 3.491964 GGGCGCCACTTAAAAGAAAGTTT 60.492 43.478 30.85 0.00 37.61 2.66
1976 2115 4.116961 GGCGCCACTTAAAAGAAAGTTTT 58.883 39.130 24.80 0.00 37.61 2.43
1977 2116 4.026062 GGCGCCACTTAAAAGAAAGTTTTG 60.026 41.667 24.80 0.00 37.61 2.44
1978 2117 4.550063 GCGCCACTTAAAAGAAAGTTTTGC 60.550 41.667 0.00 0.00 37.61 3.68
1979 2118 4.317069 CGCCACTTAAAAGAAAGTTTTGCG 60.317 41.667 9.27 9.27 40.17 4.85
1980 2119 4.550063 GCCACTTAAAAGAAAGTTTTGCGC 60.550 41.667 0.00 0.00 37.61 6.09
1981 2120 4.564769 CCACTTAAAAGAAAGTTTTGCGCA 59.435 37.500 5.66 5.66 37.61 6.09
1982 2121 5.480603 CACTTAAAAGAAAGTTTTGCGCAC 58.519 37.500 11.12 0.00 37.61 5.34
1983 2122 4.264380 ACTTAAAAGAAAGTTTTGCGCACG 59.736 37.500 11.12 0.00 36.26 5.34
1984 2123 2.271821 AAAGAAAGTTTTGCGCACGT 57.728 40.000 11.12 0.00 0.00 4.49
1985 2124 2.271821 AAGAAAGTTTTGCGCACGTT 57.728 40.000 11.12 2.90 0.00 3.99
1986 2125 2.271821 AGAAAGTTTTGCGCACGTTT 57.728 40.000 11.12 7.42 0.00 3.60
1987 2126 2.182014 AGAAAGTTTTGCGCACGTTTC 58.818 42.857 11.12 16.22 0.00 2.78
1988 2127 1.254313 GAAAGTTTTGCGCACGTTTCC 59.746 47.619 11.12 0.00 0.00 3.13
1989 2128 0.171455 AAGTTTTGCGCACGTTTCCA 59.829 45.000 11.12 0.00 0.00 3.53
1990 2129 0.383949 AGTTTTGCGCACGTTTCCAT 59.616 45.000 11.12 0.00 0.00 3.41
1991 2130 1.202359 AGTTTTGCGCACGTTTCCATT 60.202 42.857 11.12 0.00 0.00 3.16
1992 2131 1.590698 GTTTTGCGCACGTTTCCATTT 59.409 42.857 11.12 0.00 0.00 2.32
1993 2132 2.776312 TTTGCGCACGTTTCCATTTA 57.224 40.000 11.12 0.00 0.00 1.40
1994 2133 2.776312 TTGCGCACGTTTCCATTTAA 57.224 40.000 11.12 0.00 0.00 1.52
1995 2134 2.776312 TGCGCACGTTTCCATTTAAA 57.224 40.000 5.66 0.00 0.00 1.52
1996 2135 3.079960 TGCGCACGTTTCCATTTAAAA 57.920 38.095 5.66 0.00 0.00 1.52
1997 2136 3.444916 TGCGCACGTTTCCATTTAAAAA 58.555 36.364 5.66 0.00 0.00 1.94
2019 2158 6.679327 AAAATACATAAAGTCCTCGCCTTC 57.321 37.500 0.00 0.00 0.00 3.46
2020 2159 2.295253 ACATAAAGTCCTCGCCTTCG 57.705 50.000 0.00 0.00 0.00 3.79
2021 2160 1.549170 ACATAAAGTCCTCGCCTTCGT 59.451 47.619 0.00 0.00 36.96 3.85
2022 2161 2.194271 CATAAAGTCCTCGCCTTCGTC 58.806 52.381 0.00 0.00 36.96 4.20
2023 2162 1.542492 TAAAGTCCTCGCCTTCGTCT 58.458 50.000 0.00 0.00 36.96 4.18
2024 2163 1.542492 AAAGTCCTCGCCTTCGTCTA 58.458 50.000 0.00 0.00 36.96 2.59
2025 2164 1.542492 AAGTCCTCGCCTTCGTCTAA 58.458 50.000 0.00 0.00 36.96 2.10
2026 2165 1.542492 AGTCCTCGCCTTCGTCTAAA 58.458 50.000 0.00 0.00 36.96 1.85
2027 2166 1.891150 AGTCCTCGCCTTCGTCTAAAA 59.109 47.619 0.00 0.00 36.96 1.52
2028 2167 2.298163 AGTCCTCGCCTTCGTCTAAAAA 59.702 45.455 0.00 0.00 36.96 1.94
2095 2234 3.378911 AAAAATTTACCACCACAGCCG 57.621 42.857 0.00 0.00 0.00 5.52
2096 2235 2.279935 AAATTTACCACCACAGCCGA 57.720 45.000 0.00 0.00 0.00 5.54
2097 2236 1.530323 AATTTACCACCACAGCCGAC 58.470 50.000 0.00 0.00 0.00 4.79
2098 2237 0.322187 ATTTACCACCACAGCCGACC 60.322 55.000 0.00 0.00 0.00 4.79
2099 2238 1.697082 TTTACCACCACAGCCGACCA 61.697 55.000 0.00 0.00 0.00 4.02
2100 2239 2.107041 TTACCACCACAGCCGACCAG 62.107 60.000 0.00 0.00 0.00 4.00
2101 2240 3.941188 CCACCACAGCCGACCAGT 61.941 66.667 0.00 0.00 0.00 4.00
2102 2241 2.666190 CACCACAGCCGACCAGTG 60.666 66.667 0.00 0.00 0.00 3.66
2103 2242 2.842462 ACCACAGCCGACCAGTGA 60.842 61.111 0.00 0.00 35.33 3.41
2104 2243 2.047844 CCACAGCCGACCAGTGAG 60.048 66.667 0.00 0.00 35.33 3.51
2105 2244 2.737180 CACAGCCGACCAGTGAGT 59.263 61.111 0.00 0.00 35.33 3.41
2106 2245 1.665916 CACAGCCGACCAGTGAGTG 60.666 63.158 0.00 0.00 35.33 3.51
2107 2246 2.740055 CAGCCGACCAGTGAGTGC 60.740 66.667 0.00 0.00 0.00 4.40
2108 2247 3.233980 AGCCGACCAGTGAGTGCA 61.234 61.111 0.00 0.00 0.00 4.57
2109 2248 2.280797 GCCGACCAGTGAGTGCAA 60.281 61.111 0.00 0.00 0.00 4.08
2110 2249 2.607892 GCCGACCAGTGAGTGCAAC 61.608 63.158 0.00 0.00 0.00 4.17
2124 2263 3.850122 GTGCAACTTTGGATAACCCTC 57.150 47.619 0.00 0.00 35.38 4.30
2125 2264 3.153919 GTGCAACTTTGGATAACCCTCA 58.846 45.455 0.00 0.00 35.38 3.86
2126 2265 3.763897 GTGCAACTTTGGATAACCCTCAT 59.236 43.478 0.00 0.00 35.38 2.90
2127 2266 4.220602 GTGCAACTTTGGATAACCCTCATT 59.779 41.667 0.00 0.00 35.38 2.57
2128 2267 4.837860 TGCAACTTTGGATAACCCTCATTT 59.162 37.500 0.00 0.00 35.38 2.32
2129 2268 6.013379 TGCAACTTTGGATAACCCTCATTTA 58.987 36.000 0.00 0.00 35.38 1.40
2130 2269 6.495181 TGCAACTTTGGATAACCCTCATTTAA 59.505 34.615 0.00 0.00 35.38 1.52
2131 2270 7.015682 TGCAACTTTGGATAACCCTCATTTAAA 59.984 33.333 0.00 0.00 35.38 1.52
2132 2271 7.875554 GCAACTTTGGATAACCCTCATTTAAAA 59.124 33.333 0.00 0.00 35.38 1.52
2133 2272 9.771534 CAACTTTGGATAACCCTCATTTAAAAA 57.228 29.630 0.00 0.00 35.38 1.94
2152 2291 5.600669 AAAAATACCAAAGGTCCTCCTCT 57.399 39.130 0.00 0.00 44.35 3.69
2153 2292 4.846168 AAATACCAAAGGTCCTCCTCTC 57.154 45.455 0.00 0.00 44.35 3.20
2154 2293 2.249309 TACCAAAGGTCCTCCTCTCC 57.751 55.000 0.00 0.00 44.35 3.71
2155 2294 0.193574 ACCAAAGGTCCTCCTCTCCA 59.806 55.000 0.00 0.00 44.35 3.86
2156 2295 1.203492 ACCAAAGGTCCTCCTCTCCAT 60.203 52.381 0.00 0.00 44.35 3.41
2157 2296 1.488393 CCAAAGGTCCTCCTCTCCATC 59.512 57.143 0.00 0.00 44.35 3.51
2158 2297 1.137872 CAAAGGTCCTCCTCTCCATCG 59.862 57.143 0.00 0.00 44.35 3.84
2159 2298 0.631753 AAGGTCCTCCTCTCCATCGA 59.368 55.000 0.00 0.00 44.35 3.59
2160 2299 0.631753 AGGTCCTCCTCTCCATCGAA 59.368 55.000 0.00 0.00 40.58 3.71
2161 2300 1.007238 AGGTCCTCCTCTCCATCGAAA 59.993 52.381 0.00 0.00 40.58 3.46
2162 2301 1.831736 GGTCCTCCTCTCCATCGAAAA 59.168 52.381 0.00 0.00 0.00 2.29
2163 2302 2.236395 GGTCCTCCTCTCCATCGAAAAA 59.764 50.000 0.00 0.00 0.00 1.94
2201 2340 8.877864 AAATAATCCACACCTTCATCTAAACA 57.122 30.769 0.00 0.00 0.00 2.83
2202 2341 8.877864 AATAATCCACACCTTCATCTAAACAA 57.122 30.769 0.00 0.00 0.00 2.83
2203 2342 8.877864 ATAATCCACACCTTCATCTAAACAAA 57.122 30.769 0.00 0.00 0.00 2.83
2204 2343 7.595819 AATCCACACCTTCATCTAAACAAAA 57.404 32.000 0.00 0.00 0.00 2.44
2205 2344 7.781324 ATCCACACCTTCATCTAAACAAAAT 57.219 32.000 0.00 0.00 0.00 1.82
2206 2345 7.595819 TCCACACCTTCATCTAAACAAAATT 57.404 32.000 0.00 0.00 0.00 1.82
2207 2346 8.698973 TCCACACCTTCATCTAAACAAAATTA 57.301 30.769 0.00 0.00 0.00 1.40
2208 2347 8.573035 TCCACACCTTCATCTAAACAAAATTAC 58.427 33.333 0.00 0.00 0.00 1.89
2209 2348 8.356657 CCACACCTTCATCTAAACAAAATTACA 58.643 33.333 0.00 0.00 0.00 2.41
2210 2349 9.743057 CACACCTTCATCTAAACAAAATTACAA 57.257 29.630 0.00 0.00 0.00 2.41
2224 2363 8.574196 ACAAAATTACAAAAGATTTCTCACCG 57.426 30.769 0.00 0.00 0.00 4.94
2225 2364 7.169140 ACAAAATTACAAAAGATTTCTCACCGC 59.831 33.333 0.00 0.00 0.00 5.68
2226 2365 2.969443 ACAAAAGATTTCTCACCGCG 57.031 45.000 0.00 0.00 0.00 6.46
2227 2366 1.535462 ACAAAAGATTTCTCACCGCGG 59.465 47.619 26.86 26.86 0.00 6.46
2228 2367 0.521735 AAAAGATTTCTCACCGCGGC 59.478 50.000 28.58 5.95 0.00 6.53
2229 2368 1.305930 AAAGATTTCTCACCGCGGCC 61.306 55.000 28.58 4.16 0.00 6.13
2230 2369 2.435938 GATTTCTCACCGCGGCCA 60.436 61.111 28.58 11.32 0.00 5.36
2231 2370 2.033448 ATTTCTCACCGCGGCCAA 59.967 55.556 28.58 11.39 0.00 4.52
2232 2371 2.253414 GATTTCTCACCGCGGCCAAC 62.253 60.000 28.58 5.00 0.00 3.77
2243 2382 4.043200 GGCCAACCAGCTTGCGTC 62.043 66.667 0.00 0.00 35.26 5.19
2244 2383 3.286751 GCCAACCAGCTTGCGTCA 61.287 61.111 0.00 0.00 0.00 4.35
2245 2384 2.639286 CCAACCAGCTTGCGTCAC 59.361 61.111 0.00 0.00 0.00 3.67
2246 2385 2.186160 CCAACCAGCTTGCGTCACA 61.186 57.895 0.00 0.00 0.00 3.58
2247 2386 1.518056 CCAACCAGCTTGCGTCACAT 61.518 55.000 0.00 0.00 0.00 3.21
2248 2387 0.386352 CAACCAGCTTGCGTCACATG 60.386 55.000 0.00 0.00 0.00 3.21
2249 2388 1.518056 AACCAGCTTGCGTCACATGG 61.518 55.000 0.00 0.00 0.00 3.66
2250 2389 2.177531 CAGCTTGCGTCACATGGC 59.822 61.111 0.00 0.00 0.00 4.40
2251 2390 2.281692 AGCTTGCGTCACATGGCA 60.282 55.556 0.00 0.00 37.39 4.92
2252 2391 1.676635 AGCTTGCGTCACATGGCAT 60.677 52.632 0.00 0.00 39.21 4.40
2253 2392 0.392863 AGCTTGCGTCACATGGCATA 60.393 50.000 0.00 0.00 39.21 3.14
2254 2393 0.028505 GCTTGCGTCACATGGCATAG 59.971 55.000 0.00 0.00 39.21 2.23
2255 2394 1.372582 CTTGCGTCACATGGCATAGT 58.627 50.000 0.00 0.00 39.21 2.12
2256 2395 1.739466 CTTGCGTCACATGGCATAGTT 59.261 47.619 0.00 0.00 39.21 2.24
2257 2396 1.085893 TGCGTCACATGGCATAGTTG 58.914 50.000 0.00 0.00 33.52 3.16
2258 2397 0.378257 GCGTCACATGGCATAGTTGG 59.622 55.000 0.00 0.00 0.00 3.77
2259 2398 1.737838 CGTCACATGGCATAGTTGGT 58.262 50.000 0.00 0.00 0.00 3.67
2260 2399 2.083774 CGTCACATGGCATAGTTGGTT 58.916 47.619 0.00 0.00 0.00 3.67
2261 2400 2.159531 CGTCACATGGCATAGTTGGTTG 60.160 50.000 0.00 0.00 0.00 3.77
2262 2401 2.164219 GTCACATGGCATAGTTGGTTGG 59.836 50.000 0.00 0.00 0.00 3.77
2263 2402 1.135024 CACATGGCATAGTTGGTTGGC 60.135 52.381 0.00 0.00 38.77 4.52
2264 2403 0.461135 CATGGCATAGTTGGTTGGCC 59.539 55.000 0.00 0.00 44.82 5.36
2265 2404 4.432601 GGCATAGTTGGTTGGCCA 57.567 55.556 0.00 0.00 44.01 5.36
2266 2405 1.890174 GGCATAGTTGGTTGGCCAC 59.110 57.895 3.88 0.00 46.01 5.01
2267 2406 1.604147 GGCATAGTTGGTTGGCCACC 61.604 60.000 3.88 11.51 46.01 4.61
2268 2407 1.604147 GCATAGTTGGTTGGCCACCC 61.604 60.000 13.50 13.50 46.68 4.61
2269 2408 0.039618 CATAGTTGGTTGGCCACCCT 59.960 55.000 21.42 13.08 46.68 4.34
2270 2409 0.783850 ATAGTTGGTTGGCCACCCTT 59.216 50.000 21.42 8.70 46.68 3.95
2271 2410 0.111639 TAGTTGGTTGGCCACCCTTC 59.888 55.000 21.42 12.93 46.68 3.46
2272 2411 2.203422 TTGGTTGGCCACCCTTCG 60.203 61.111 21.42 0.00 46.68 3.79
2273 2412 4.966787 TGGTTGGCCACCCTTCGC 62.967 66.667 21.42 0.00 46.68 4.70
2301 2440 9.962783 CGTAGCTTAATAGGTTTAACTAGTGAT 57.037 33.333 0.00 0.00 33.36 3.06
2304 2443 9.614792 AGCTTAATAGGTTTAACTAGTGATTGG 57.385 33.333 0.00 0.00 0.00 3.16
2305 2444 8.837389 GCTTAATAGGTTTAACTAGTGATTGGG 58.163 37.037 0.00 0.00 0.00 4.12
2306 2445 9.338622 CTTAATAGGTTTAACTAGTGATTGGGG 57.661 37.037 0.00 0.00 0.00 4.96
2307 2446 3.964411 AGGTTTAACTAGTGATTGGGGC 58.036 45.455 0.00 0.00 0.00 5.80
2308 2447 3.332485 AGGTTTAACTAGTGATTGGGGCA 59.668 43.478 0.00 0.00 0.00 5.36
2309 2448 3.442625 GGTTTAACTAGTGATTGGGGCAC 59.557 47.826 0.00 0.00 36.53 5.01
2327 2466 4.974721 CACCTTGTGGCGCCCCTT 62.975 66.667 26.77 0.00 36.63 3.95
2328 2467 4.974721 ACCTTGTGGCGCCCCTTG 62.975 66.667 26.77 11.81 36.63 3.61
2329 2468 4.659172 CCTTGTGGCGCCCCTTGA 62.659 66.667 26.77 0.09 0.00 3.02
2330 2469 3.058160 CTTGTGGCGCCCCTTGAG 61.058 66.667 26.77 10.92 0.00 3.02
2331 2470 3.551496 CTTGTGGCGCCCCTTGAGA 62.551 63.158 26.77 0.00 0.00 3.27
2332 2471 2.826777 CTTGTGGCGCCCCTTGAGAT 62.827 60.000 26.77 0.00 0.00 2.75
2333 2472 2.825836 GTGGCGCCCCTTGAGATG 60.826 66.667 26.77 0.00 0.00 2.90
2334 2473 3.008517 TGGCGCCCCTTGAGATGA 61.009 61.111 26.77 0.00 0.00 2.92
2335 2474 2.272146 GGCGCCCCTTGAGATGAA 59.728 61.111 18.11 0.00 0.00 2.57
2336 2475 1.821332 GGCGCCCCTTGAGATGAAG 60.821 63.158 18.11 0.00 0.00 3.02
2337 2476 2.476320 GCGCCCCTTGAGATGAAGC 61.476 63.158 0.00 0.00 0.00 3.86
2338 2477 1.222936 CGCCCCTTGAGATGAAGCT 59.777 57.895 0.00 0.00 0.00 3.74
2339 2478 1.094073 CGCCCCTTGAGATGAAGCTG 61.094 60.000 0.00 0.00 0.00 4.24
2340 2479 0.034670 GCCCCTTGAGATGAAGCTGT 60.035 55.000 0.00 0.00 0.00 4.40
2341 2480 1.747709 CCCCTTGAGATGAAGCTGTG 58.252 55.000 0.00 0.00 0.00 3.66
2342 2481 1.093159 CCCTTGAGATGAAGCTGTGC 58.907 55.000 0.00 0.00 0.00 4.57
2343 2482 0.725686 CCTTGAGATGAAGCTGTGCG 59.274 55.000 0.00 0.00 0.00 5.34
2344 2483 0.096628 CTTGAGATGAAGCTGTGCGC 59.903 55.000 0.00 0.00 39.57 6.09
2345 2484 0.603439 TTGAGATGAAGCTGTGCGCA 60.603 50.000 5.66 5.66 42.61 6.09
2346 2485 1.293963 TGAGATGAAGCTGTGCGCAC 61.294 55.000 33.11 33.11 42.61 5.34
2347 2486 1.293963 GAGATGAAGCTGTGCGCACA 61.294 55.000 38.28 38.28 42.61 4.57
2348 2487 0.675837 AGATGAAGCTGTGCGCACAT 60.676 50.000 40.50 27.96 41.01 3.21
2349 2488 0.169672 GATGAAGCTGTGCGCACATT 59.830 50.000 40.50 32.39 41.01 2.71
2350 2489 0.599558 ATGAAGCTGTGCGCACATTT 59.400 45.000 40.50 34.07 41.01 2.32
2351 2490 0.040157 TGAAGCTGTGCGCACATTTC 60.040 50.000 36.28 36.28 41.01 2.17
2352 2491 0.239347 GAAGCTGTGCGCACATTTCT 59.761 50.000 40.50 31.45 41.01 2.52
2353 2492 1.464608 GAAGCTGTGCGCACATTTCTA 59.535 47.619 40.50 19.19 41.01 2.10
2354 2493 1.742761 AGCTGTGCGCACATTTCTAT 58.257 45.000 40.50 20.70 41.01 1.98
2355 2494 2.086869 AGCTGTGCGCACATTTCTATT 58.913 42.857 40.50 18.96 41.01 1.73
2356 2495 2.159476 AGCTGTGCGCACATTTCTATTG 60.159 45.455 40.50 27.01 41.01 1.90
2357 2496 2.159531 GCTGTGCGCACATTTCTATTGA 60.160 45.455 40.50 16.16 41.01 2.57
2358 2497 3.670359 GCTGTGCGCACATTTCTATTGAA 60.670 43.478 40.50 15.63 41.01 2.69
2359 2498 4.475028 CTGTGCGCACATTTCTATTGAAA 58.525 39.130 40.50 15.42 44.99 2.69
2360 2499 4.864633 TGTGCGCACATTTCTATTGAAAA 58.135 34.783 37.86 11.34 44.22 2.29
2361 2500 5.284864 TGTGCGCACATTTCTATTGAAAAA 58.715 33.333 37.86 10.62 44.22 1.94
2382 2521 7.648039 AAAAATACATAGAGTCCTCGAGTCT 57.352 36.000 12.31 10.32 43.70 3.24
2383 2522 7.648039 AAAATACATAGAGTCCTCGAGTCTT 57.352 36.000 12.31 0.00 39.03 3.01
2384 2523 6.870971 AATACATAGAGTCCTCGAGTCTTC 57.129 41.667 12.31 5.50 39.03 2.87
2386 2525 1.654317 TAGAGTCCTCGAGTCTTCGC 58.346 55.000 12.31 0.82 46.28 4.70
2387 2526 1.027792 AGAGTCCTCGAGTCTTCGCC 61.028 60.000 12.31 0.00 46.28 5.54
2388 2527 1.001887 AGTCCTCGAGTCTTCGCCT 60.002 57.895 12.31 0.00 46.28 5.52
2389 2528 1.027792 AGTCCTCGAGTCTTCGCCTC 61.028 60.000 12.31 0.00 46.28 4.70
2390 2529 1.749638 TCCTCGAGTCTTCGCCTCC 60.750 63.158 12.31 0.00 46.28 4.30
2391 2530 2.046864 CCTCGAGTCTTCGCCTCCA 61.047 63.158 12.31 0.00 46.28 3.86
2392 2531 1.388065 CCTCGAGTCTTCGCCTCCAT 61.388 60.000 12.31 0.00 46.28 3.41
2393 2532 0.030101 CTCGAGTCTTCGCCTCCATC 59.970 60.000 3.62 0.00 46.28 3.51
2394 2533 1.298713 CGAGTCTTCGCCTCCATCG 60.299 63.158 0.00 0.00 40.36 3.84
2395 2534 1.715862 CGAGTCTTCGCCTCCATCGA 61.716 60.000 0.00 0.00 40.36 3.59
2396 2535 0.456221 GAGTCTTCGCCTCCATCGAA 59.544 55.000 0.00 0.00 42.74 3.71
2397 2536 0.895530 AGTCTTCGCCTCCATCGAAA 59.104 50.000 0.00 0.00 44.03 3.46
2398 2537 1.275291 AGTCTTCGCCTCCATCGAAAA 59.725 47.619 0.00 0.00 44.03 2.29
2399 2538 2.073816 GTCTTCGCCTCCATCGAAAAA 58.926 47.619 0.00 0.00 44.03 1.94
2453 2592 5.959618 AAAAGAATACCACAACAGCCTAC 57.040 39.130 0.00 0.00 0.00 3.18
2454 2593 3.629142 AGAATACCACAACAGCCTACC 57.371 47.619 0.00 0.00 0.00 3.18
2455 2594 2.910319 AGAATACCACAACAGCCTACCA 59.090 45.455 0.00 0.00 0.00 3.25
2456 2595 3.055094 AGAATACCACAACAGCCTACCAG 60.055 47.826 0.00 0.00 0.00 4.00
2457 2596 0.323629 TACCACAACAGCCTACCAGC 59.676 55.000 0.00 0.00 0.00 4.85
2458 2597 2.034879 CCACAACAGCCTACCAGCG 61.035 63.158 0.00 0.00 38.01 5.18
2459 2598 1.005037 CACAACAGCCTACCAGCGA 60.005 57.895 0.00 0.00 38.01 4.93
2460 2599 1.016130 CACAACAGCCTACCAGCGAG 61.016 60.000 0.00 0.00 38.01 5.03
2461 2600 1.293498 CAACAGCCTACCAGCGAGT 59.707 57.895 0.00 0.00 38.01 4.18
2462 2601 1.016130 CAACAGCCTACCAGCGAGTG 61.016 60.000 0.00 0.00 38.01 3.51
2463 2602 2.510238 CAGCCTACCAGCGAGTGC 60.510 66.667 0.00 0.00 43.24 4.40
2464 2603 3.775654 AGCCTACCAGCGAGTGCC 61.776 66.667 0.00 0.00 44.31 5.01
2465 2604 4.082523 GCCTACCAGCGAGTGCCA 62.083 66.667 0.00 0.00 44.31 4.92
2466 2605 2.125512 CCTACCAGCGAGTGCCAC 60.126 66.667 0.00 0.00 44.31 5.01
2467 2606 2.650116 CCTACCAGCGAGTGCCACT 61.650 63.158 0.00 0.00 44.31 4.00
2468 2607 1.293498 CTACCAGCGAGTGCCACTT 59.707 57.895 0.00 0.00 44.31 3.16
2469 2608 0.320771 CTACCAGCGAGTGCCACTTT 60.321 55.000 0.00 0.00 44.31 2.66
2470 2609 0.602638 TACCAGCGAGTGCCACTTTG 60.603 55.000 0.00 0.00 44.31 2.77
2471 2610 2.253452 CAGCGAGTGCCACTTTGC 59.747 61.111 13.31 13.31 44.31 3.68
2472 2611 2.203195 AGCGAGTGCCACTTTGCA 60.203 55.556 20.52 0.41 44.31 4.08
2473 2612 1.601759 AGCGAGTGCCACTTTGCAT 60.602 52.632 20.52 7.23 44.30 3.96
2474 2613 0.321564 AGCGAGTGCCACTTTGCATA 60.322 50.000 20.52 0.00 44.30 3.14
2475 2614 0.521291 GCGAGTGCCACTTTGCATAA 59.479 50.000 15.52 0.00 44.30 1.90
2476 2615 1.729149 GCGAGTGCCACTTTGCATAAC 60.729 52.381 15.52 0.00 44.30 1.89
2477 2616 1.135689 CGAGTGCCACTTTGCATAACC 60.136 52.381 0.00 0.00 44.30 2.85
2478 2617 1.202348 GAGTGCCACTTTGCATAACCC 59.798 52.381 0.00 0.00 44.30 4.11
2479 2618 1.203050 AGTGCCACTTTGCATAACCCT 60.203 47.619 0.00 0.00 44.30 4.34
2480 2619 1.202348 GTGCCACTTTGCATAACCCTC 59.798 52.381 0.00 0.00 44.30 4.30
2481 2620 0.817654 GCCACTTTGCATAACCCTCC 59.182 55.000 0.00 0.00 0.00 4.30
2482 2621 1.890573 GCCACTTTGCATAACCCTCCA 60.891 52.381 0.00 0.00 0.00 3.86
2483 2622 2.738743 CCACTTTGCATAACCCTCCAT 58.261 47.619 0.00 0.00 0.00 3.41
2484 2623 3.099141 CCACTTTGCATAACCCTCCATT 58.901 45.455 0.00 0.00 0.00 3.16
2485 2624 3.515104 CCACTTTGCATAACCCTCCATTT 59.485 43.478 0.00 0.00 0.00 2.32
2486 2625 4.709397 CCACTTTGCATAACCCTCCATTTA 59.291 41.667 0.00 0.00 0.00 1.40
2487 2626 5.186797 CCACTTTGCATAACCCTCCATTTAA 59.813 40.000 0.00 0.00 0.00 1.52
2488 2627 6.295575 CCACTTTGCATAACCCTCCATTTAAA 60.296 38.462 0.00 0.00 0.00 1.52
2489 2628 7.158021 CACTTTGCATAACCCTCCATTTAAAA 58.842 34.615 0.00 0.00 0.00 1.52
2490 2629 7.823799 CACTTTGCATAACCCTCCATTTAAAAT 59.176 33.333 0.00 0.00 0.00 1.82
2491 2630 9.041354 ACTTTGCATAACCCTCCATTTAAAATA 57.959 29.630 0.00 0.00 0.00 1.40
2495 2634 9.084533 TGCATAACCCTCCATTTAAAATATACC 57.915 33.333 0.00 0.00 0.00 2.73
2496 2635 9.084533 GCATAACCCTCCATTTAAAATATACCA 57.915 33.333 0.00 0.00 0.00 3.25
2499 2638 8.996651 AACCCTCCATTTAAAATATACCAGAG 57.003 34.615 0.00 0.00 0.00 3.35
2500 2639 7.526918 ACCCTCCATTTAAAATATACCAGAGG 58.473 38.462 0.00 0.00 37.50 3.69
2501 2640 7.130442 ACCCTCCATTTAAAATATACCAGAGGT 59.870 37.037 0.00 0.00 40.16 3.85
2502 2641 7.665974 CCCTCCATTTAAAATATACCAGAGGTC 59.334 40.741 0.00 0.00 37.09 3.85
2503 2642 7.665974 CCTCCATTTAAAATATACCAGAGGTCC 59.334 40.741 0.00 0.00 37.09 4.46
2504 2643 8.344939 TCCATTTAAAATATACCAGAGGTCCT 57.655 34.615 0.00 0.00 37.09 3.85
2505 2644 8.437575 TCCATTTAAAATATACCAGAGGTCCTC 58.562 37.037 11.31 11.31 37.09 3.71
2506 2645 8.440771 CCATTTAAAATATACCAGAGGTCCTCT 58.559 37.037 16.28 16.28 42.11 3.69
2507 2646 9.853177 CATTTAAAATATACCAGAGGTCCTCTT 57.147 33.333 19.46 8.49 38.99 2.85
2509 2648 8.855804 TTAAAATATACCAGAGGTCCTCTTCT 57.144 34.615 19.46 9.28 38.99 2.85
2510 2649 7.757242 AAAATATACCAGAGGTCCTCTTCTT 57.243 36.000 19.46 8.60 38.99 2.52
2511 2650 6.987403 AATATACCAGAGGTCCTCTTCTTC 57.013 41.667 19.46 0.00 38.99 2.87
2512 2651 2.704190 ACCAGAGGTCCTCTTCTTCA 57.296 50.000 19.46 0.00 38.99 3.02
2513 2652 3.197927 ACCAGAGGTCCTCTTCTTCAT 57.802 47.619 19.46 0.00 38.99 2.57
2514 2653 3.103742 ACCAGAGGTCCTCTTCTTCATC 58.896 50.000 19.46 0.00 38.99 2.92
2515 2654 3.245948 ACCAGAGGTCCTCTTCTTCATCT 60.246 47.826 19.46 0.00 38.99 2.90
2516 2655 4.017037 ACCAGAGGTCCTCTTCTTCATCTA 60.017 45.833 19.46 0.00 38.99 1.98
2517 2656 4.959210 CCAGAGGTCCTCTTCTTCATCTAA 59.041 45.833 19.46 0.00 38.99 2.10
2518 2657 5.423610 CCAGAGGTCCTCTTCTTCATCTAAA 59.576 44.000 19.46 0.00 38.99 1.85
2519 2658 6.070538 CCAGAGGTCCTCTTCTTCATCTAAAA 60.071 42.308 19.46 0.00 38.99 1.52
2520 2659 7.390027 CAGAGGTCCTCTTCTTCATCTAAAAA 58.610 38.462 19.46 0.00 38.99 1.94
2521 2660 7.548780 CAGAGGTCCTCTTCTTCATCTAAAAAG 59.451 40.741 19.46 0.00 38.99 2.27
2522 2661 7.456269 AGAGGTCCTCTTCTTCATCTAAAAAGA 59.544 37.037 16.28 0.00 37.60 2.52
2523 2662 7.978925 AGGTCCTCTTCTTCATCTAAAAAGAA 58.021 34.615 0.00 0.00 38.76 2.52
2524 2663 8.440771 AGGTCCTCTTCTTCATCTAAAAAGAAA 58.559 33.333 0.00 0.00 40.09 2.52
2525 2664 9.237187 GGTCCTCTTCTTCATCTAAAAAGAAAT 57.763 33.333 0.00 0.00 40.09 2.17
2584 2723 7.637709 AAATTTGTAAAAGATTTCTCACCGC 57.362 32.000 0.00 0.00 0.00 5.68
2585 2724 4.398549 TTGTAAAAGATTTCTCACCGCG 57.601 40.909 0.00 0.00 0.00 6.46
2586 2725 2.739913 TGTAAAAGATTTCTCACCGCGG 59.260 45.455 26.86 26.86 0.00 6.46
2587 2726 0.521735 AAAAGATTTCTCACCGCGGC 59.478 50.000 28.58 5.95 0.00 6.53
2588 2727 1.305930 AAAGATTTCTCACCGCGGCC 61.306 55.000 28.58 4.16 0.00 6.13
2589 2728 2.435938 GATTTCTCACCGCGGCCA 60.436 61.111 28.58 11.32 0.00 5.36
2590 2729 2.033448 ATTTCTCACCGCGGCCAA 59.967 55.556 28.58 11.39 0.00 4.52
2591 2730 2.253414 GATTTCTCACCGCGGCCAAC 62.253 60.000 28.58 5.00 0.00 3.77
2604 2743 4.347453 CCAACCAGCTTGCGCCAC 62.347 66.667 4.18 0.00 36.60 5.01
2605 2744 4.688419 CAACCAGCTTGCGCCACG 62.688 66.667 4.18 0.00 36.60 4.94
2607 2746 3.818121 AACCAGCTTGCGCCACGTA 62.818 57.895 4.18 0.00 36.60 3.57
2608 2747 3.490759 CCAGCTTGCGCCACGTAG 61.491 66.667 4.18 0.00 36.60 3.51
2609 2748 4.152625 CAGCTTGCGCCACGTAGC 62.153 66.667 4.18 6.19 37.09 3.58
2610 2749 4.680237 AGCTTGCGCCACGTAGCA 62.680 61.111 4.18 7.59 42.15 3.49
2611 2750 3.499737 GCTTGCGCCACGTAGCAT 61.500 61.111 4.18 0.00 43.42 3.79
2612 2751 2.171079 GCTTGCGCCACGTAGCATA 61.171 57.895 4.18 0.00 43.42 3.14
2613 2752 1.927210 CTTGCGCCACGTAGCATAG 59.073 57.895 4.18 7.07 43.42 2.23
2614 2753 2.094126 CTTGCGCCACGTAGCATAGC 62.094 60.000 4.18 1.97 43.42 2.97
2615 2754 2.279517 GCGCCACGTAGCATAGCT 60.280 61.111 6.80 0.00 43.41 3.32
2616 2755 2.589492 GCGCCACGTAGCATAGCTG 61.589 63.158 6.80 0.00 40.10 4.24
2617 2756 1.951130 CGCCACGTAGCATAGCTGG 60.951 63.158 6.80 0.00 40.10 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 3.745803 GCCACAGCCAGCTTGCTC 61.746 66.667 9.79 0.00 40.32 4.26
19 20 1.603842 CATGGAGTAGGCAGCCACA 59.396 57.895 15.80 4.71 33.93 4.17
20 21 1.153086 CCATGGAGTAGGCAGCCAC 60.153 63.158 15.80 10.03 33.93 5.01
78 82 3.756739 CTAGAGGAGCAAGCTGGTG 57.243 57.895 0.00 0.00 0.00 4.17
261 280 5.129485 TCTGGCTAATTAAAGAGGAGACAGG 59.871 44.000 5.38 0.00 42.53 4.00
280 302 0.106894 CCCCTAATCCGACTTCTGGC 59.893 60.000 0.00 0.00 0.00 4.85
281 303 0.759346 CCCCCTAATCCGACTTCTGG 59.241 60.000 0.00 0.00 0.00 3.86
283 305 1.291335 ACTCCCCCTAATCCGACTTCT 59.709 52.381 0.00 0.00 0.00 2.85
285 307 1.497161 CACTCCCCCTAATCCGACTT 58.503 55.000 0.00 0.00 0.00 3.01
301 326 4.934356 TCCCCAAAATCTTGATTAGCACT 58.066 39.130 0.00 0.00 34.14 4.40
311 336 5.163353 ACGTGTTTGAAATCCCCAAAATCTT 60.163 36.000 0.00 0.00 35.57 2.40
457 535 4.033709 TCACTTCCCTTGGAATCTAGGAG 58.966 47.826 0.00 0.00 41.23 3.69
458 536 4.074799 TCACTTCCCTTGGAATCTAGGA 57.925 45.455 0.00 0.00 41.23 2.94
459 537 4.471386 TCTTCACTTCCCTTGGAATCTAGG 59.529 45.833 0.00 0.00 41.23 3.02
460 538 5.683876 TCTTCACTTCCCTTGGAATCTAG 57.316 43.478 0.00 0.00 41.23 2.43
465 543 5.843019 ACTAATCTTCACTTCCCTTGGAA 57.157 39.130 0.00 0.00 39.66 3.53
499 577 3.057596 GCTGTCCTCGGATGAATCTAGAG 60.058 52.174 0.00 8.41 34.12 2.43
529 607 4.520492 ACTTATGCCATAATTACAGCAGCC 59.480 41.667 14.54 0.00 38.89 4.85
530 608 5.695851 ACTTATGCCATAATTACAGCAGC 57.304 39.130 14.54 3.21 38.89 5.25
531 609 8.090831 TCTCTACTTATGCCATAATTACAGCAG 58.909 37.037 14.54 6.22 38.89 4.24
532 610 7.962441 TCTCTACTTATGCCATAATTACAGCA 58.038 34.615 12.29 12.29 40.00 4.41
550 632 6.095160 CCATTACGTGAAACCTACTCTCTACT 59.905 42.308 0.00 0.00 0.00 2.57
551 633 6.264088 CCATTACGTGAAACCTACTCTCTAC 58.736 44.000 0.00 0.00 0.00 2.59
552 634 5.163581 GCCATTACGTGAAACCTACTCTCTA 60.164 44.000 0.00 0.00 0.00 2.43
553 635 4.381718 GCCATTACGTGAAACCTACTCTCT 60.382 45.833 0.00 0.00 0.00 3.10
554 636 3.864003 GCCATTACGTGAAACCTACTCTC 59.136 47.826 0.00 0.00 0.00 3.20
555 637 3.675228 CGCCATTACGTGAAACCTACTCT 60.675 47.826 0.00 0.00 0.00 3.24
556 638 2.601763 CGCCATTACGTGAAACCTACTC 59.398 50.000 0.00 0.00 0.00 2.59
728 812 4.348863 AGCTTTAGGATGTAGCAGGATG 57.651 45.455 0.00 0.00 37.37 3.51
773 857 4.969136 AAAGGAGGAGGGTAAGTAGAGA 57.031 45.455 0.00 0.00 0.00 3.10
810 894 6.017192 GCCTTTTGGTTTTGTGATTAAGCATT 60.017 34.615 0.00 0.00 42.99 3.56
811 895 5.469760 GCCTTTTGGTTTTGTGATTAAGCAT 59.530 36.000 0.00 0.00 42.99 3.79
823 907 2.279851 GCGCCGCCTTTTGGTTTT 60.280 55.556 0.00 0.00 42.99 2.43
862 946 1.939838 GCAACTACAAGAGGACCGTGG 60.940 57.143 0.00 0.00 0.00 4.94
905 997 7.147479 CCACAGGTAAGGGTAGTAGTAGTAGTA 60.147 44.444 0.00 0.00 0.00 1.82
906 998 6.353429 CCACAGGTAAGGGTAGTAGTAGTAGT 60.353 46.154 0.00 0.00 0.00 2.73
927 1019 1.534336 AATGCGCAATTGAGCCCACA 61.534 50.000 27.95 12.42 40.22 4.17
1225 1345 4.828925 GGACTGCAGCCTCGCCTC 62.829 72.222 15.27 1.14 0.00 4.70
1431 1560 4.517934 TCCTCCCGGGGCTCGTAG 62.518 72.222 23.50 9.42 37.11 3.51
1624 1753 0.525668 GCGGACATGGACGACAGTAG 60.526 60.000 14.33 0.00 0.00 2.57
1697 1833 9.522804 TTTGAACAAAAATTAACTTATCACGCT 57.477 25.926 0.00 0.00 0.00 5.07
1838 1976 2.771943 TCCACATCTGAACTGGGGATAC 59.228 50.000 0.00 0.00 41.31 2.24
1844 1982 4.691860 GTGAAATCCACATCTGAACTGG 57.308 45.455 0.00 0.00 45.03 4.00
1865 2003 5.375417 TGTTGACCTTGCATCACTTATTG 57.625 39.130 0.00 0.00 0.00 1.90
1873 2011 4.510038 AACTCAATGTTGACCTTGCATC 57.490 40.909 0.00 0.00 37.52 3.91
1895 2034 0.111061 ATGGATGTGTATGCCGGCAT 59.889 50.000 41.28 41.28 40.19 4.40
1896 2035 0.818852 CATGGATGTGTATGCCGGCA 60.819 55.000 34.80 34.80 0.00 5.69
1897 2036 0.534877 TCATGGATGTGTATGCCGGC 60.535 55.000 22.73 22.73 0.00 6.13
1898 2037 1.965935 TTCATGGATGTGTATGCCGG 58.034 50.000 0.00 0.00 0.00 6.13
1899 2038 4.064388 TGTATTCATGGATGTGTATGCCG 58.936 43.478 0.00 0.00 0.00 5.69
1900 2039 4.083855 CGTGTATTCATGGATGTGTATGCC 60.084 45.833 0.00 0.00 0.00 4.40
1901 2040 4.749598 TCGTGTATTCATGGATGTGTATGC 59.250 41.667 0.00 0.00 0.00 3.14
1902 2041 5.177511 GGTCGTGTATTCATGGATGTGTATG 59.822 44.000 0.00 0.00 0.00 2.39
1903 2042 5.070446 AGGTCGTGTATTCATGGATGTGTAT 59.930 40.000 0.00 0.00 0.00 2.29
1904 2043 4.404394 AGGTCGTGTATTCATGGATGTGTA 59.596 41.667 0.00 0.00 0.00 2.90
1905 2044 3.197766 AGGTCGTGTATTCATGGATGTGT 59.802 43.478 0.00 0.00 0.00 3.72
1906 2045 3.797039 AGGTCGTGTATTCATGGATGTG 58.203 45.455 0.00 0.00 0.00 3.21
1907 2046 4.501571 GCTAGGTCGTGTATTCATGGATGT 60.502 45.833 0.00 0.00 0.00 3.06
1908 2047 3.990469 GCTAGGTCGTGTATTCATGGATG 59.010 47.826 0.00 0.00 0.00 3.51
1909 2048 3.641436 TGCTAGGTCGTGTATTCATGGAT 59.359 43.478 0.00 0.00 0.00 3.41
1910 2049 3.028130 TGCTAGGTCGTGTATTCATGGA 58.972 45.455 0.00 0.00 0.00 3.41
1911 2050 3.452755 TGCTAGGTCGTGTATTCATGG 57.547 47.619 0.00 0.00 0.00 3.66
1912 2051 7.658179 ATTAATGCTAGGTCGTGTATTCATG 57.342 36.000 0.00 0.00 0.00 3.07
1913 2052 9.944376 ATTATTAATGCTAGGTCGTGTATTCAT 57.056 29.630 0.00 0.00 0.00 2.57
1914 2053 9.772973 AATTATTAATGCTAGGTCGTGTATTCA 57.227 29.630 0.00 0.00 0.00 2.57
1928 2067 9.131791 CCCAACCACTAGTAAATTATTAATGCT 57.868 33.333 0.00 0.00 0.00 3.79
1929 2068 8.357402 CCCCAACCACTAGTAAATTATTAATGC 58.643 37.037 0.00 0.00 0.00 3.56
1930 2069 8.357402 GCCCCAACCACTAGTAAATTATTAATG 58.643 37.037 0.00 0.00 0.00 1.90
1931 2070 7.229907 CGCCCCAACCACTAGTAAATTATTAAT 59.770 37.037 0.00 0.00 0.00 1.40
1932 2071 6.543100 CGCCCCAACCACTAGTAAATTATTAA 59.457 38.462 0.00 0.00 0.00 1.40
1933 2072 6.056884 CGCCCCAACCACTAGTAAATTATTA 58.943 40.000 0.00 0.00 0.00 0.98
1934 2073 4.885325 CGCCCCAACCACTAGTAAATTATT 59.115 41.667 0.00 0.00 0.00 1.40
1935 2074 4.457466 CGCCCCAACCACTAGTAAATTAT 58.543 43.478 0.00 0.00 0.00 1.28
1936 2075 3.876341 CGCCCCAACCACTAGTAAATTA 58.124 45.455 0.00 0.00 0.00 1.40
1937 2076 2.718563 CGCCCCAACCACTAGTAAATT 58.281 47.619 0.00 0.00 0.00 1.82
1938 2077 1.680860 GCGCCCCAACCACTAGTAAAT 60.681 52.381 0.00 0.00 0.00 1.40
1939 2078 0.321830 GCGCCCCAACCACTAGTAAA 60.322 55.000 0.00 0.00 0.00 2.01
1940 2079 1.297364 GCGCCCCAACCACTAGTAA 59.703 57.895 0.00 0.00 0.00 2.24
1941 2080 2.662070 GGCGCCCCAACCACTAGTA 61.662 63.158 18.11 0.00 0.00 1.82
1942 2081 4.029809 GGCGCCCCAACCACTAGT 62.030 66.667 18.11 0.00 0.00 2.57
1943 2082 4.028490 TGGCGCCCCAACCACTAG 62.028 66.667 26.77 0.00 38.46 2.57
1947 2086 2.642183 TTTAAGTGGCGCCCCAACCA 62.642 55.000 26.77 0.00 44.33 3.67
1948 2087 1.465200 TTTTAAGTGGCGCCCCAACC 61.465 55.000 26.77 6.51 44.33 3.77
1949 2088 0.038618 CTTTTAAGTGGCGCCCCAAC 60.039 55.000 26.77 16.33 44.33 3.77
1950 2089 0.178987 TCTTTTAAGTGGCGCCCCAA 60.179 50.000 26.77 9.58 44.33 4.12
1951 2090 0.178987 TTCTTTTAAGTGGCGCCCCA 60.179 50.000 26.77 2.06 39.32 4.96
1952 2091 0.963225 TTTCTTTTAAGTGGCGCCCC 59.037 50.000 26.77 14.03 0.00 5.80
1953 2092 1.611977 ACTTTCTTTTAAGTGGCGCCC 59.388 47.619 26.77 15.80 37.00 6.13
1954 2093 3.364889 AACTTTCTTTTAAGTGGCGCC 57.635 42.857 22.73 22.73 38.33 6.53
1955 2094 4.550063 GCAAAACTTTCTTTTAAGTGGCGC 60.550 41.667 0.00 0.00 38.33 6.53
1956 2095 4.317069 CGCAAAACTTTCTTTTAAGTGGCG 60.317 41.667 12.53 12.53 42.17 5.69
1957 2096 4.550063 GCGCAAAACTTTCTTTTAAGTGGC 60.550 41.667 0.30 0.00 38.33 5.01
1958 2097 4.564769 TGCGCAAAACTTTCTTTTAAGTGG 59.435 37.500 8.16 0.00 38.33 4.00
1959 2098 5.480603 GTGCGCAAAACTTTCTTTTAAGTG 58.519 37.500 14.00 0.00 38.33 3.16
1960 2099 4.264380 CGTGCGCAAAACTTTCTTTTAAGT 59.736 37.500 14.00 0.00 39.97 2.24
1961 2100 4.264380 ACGTGCGCAAAACTTTCTTTTAAG 59.736 37.500 14.00 0.00 0.00 1.85
1962 2101 4.167268 ACGTGCGCAAAACTTTCTTTTAA 58.833 34.783 14.00 0.00 0.00 1.52
1963 2102 3.760537 ACGTGCGCAAAACTTTCTTTTA 58.239 36.364 14.00 0.00 0.00 1.52
1964 2103 2.601804 ACGTGCGCAAAACTTTCTTTT 58.398 38.095 14.00 0.00 0.00 2.27
1965 2104 2.271821 ACGTGCGCAAAACTTTCTTT 57.728 40.000 14.00 0.00 0.00 2.52
1966 2105 2.271821 AACGTGCGCAAAACTTTCTT 57.728 40.000 14.00 0.00 0.00 2.52
1967 2106 2.182014 GAAACGTGCGCAAAACTTTCT 58.818 42.857 14.00 0.00 0.00 2.52
1968 2107 1.254313 GGAAACGTGCGCAAAACTTTC 59.746 47.619 14.00 15.61 0.00 2.62
1969 2108 1.273688 GGAAACGTGCGCAAAACTTT 58.726 45.000 14.00 7.13 0.00 2.66
1970 2109 0.171455 TGGAAACGTGCGCAAAACTT 59.829 45.000 14.00 2.85 0.00 2.66
1971 2110 0.383949 ATGGAAACGTGCGCAAAACT 59.616 45.000 14.00 0.00 0.00 2.66
1972 2111 1.204792 AATGGAAACGTGCGCAAAAC 58.795 45.000 14.00 0.00 0.00 2.43
1973 2112 1.927895 AAATGGAAACGTGCGCAAAA 58.072 40.000 14.00 0.00 0.00 2.44
1974 2113 2.776312 TAAATGGAAACGTGCGCAAA 57.224 40.000 14.00 0.00 0.00 3.68
1975 2114 2.776312 TTAAATGGAAACGTGCGCAA 57.224 40.000 14.00 0.00 0.00 4.85
1976 2115 2.776312 TTTAAATGGAAACGTGCGCA 57.224 40.000 5.66 5.66 0.00 6.09
1995 2134 6.183360 CGAAGGCGAGGACTTTATGTATTTTT 60.183 38.462 0.00 0.00 40.82 1.94
1996 2135 5.293569 CGAAGGCGAGGACTTTATGTATTTT 59.706 40.000 0.00 0.00 40.82 1.82
1997 2136 4.809426 CGAAGGCGAGGACTTTATGTATTT 59.191 41.667 0.00 0.00 40.82 1.40
1998 2137 4.142004 ACGAAGGCGAGGACTTTATGTATT 60.142 41.667 0.00 0.00 41.64 1.89
1999 2138 3.383825 ACGAAGGCGAGGACTTTATGTAT 59.616 43.478 0.00 0.00 41.64 2.29
2000 2139 2.756760 ACGAAGGCGAGGACTTTATGTA 59.243 45.455 0.00 0.00 41.64 2.29
2001 2140 1.549170 ACGAAGGCGAGGACTTTATGT 59.451 47.619 0.00 0.00 41.64 2.29
2002 2141 2.159226 AGACGAAGGCGAGGACTTTATG 60.159 50.000 0.00 0.00 41.64 1.90
2003 2142 2.100989 AGACGAAGGCGAGGACTTTAT 58.899 47.619 0.00 0.00 41.64 1.40
2004 2143 1.542492 AGACGAAGGCGAGGACTTTA 58.458 50.000 0.00 0.00 41.64 1.85
2005 2144 1.542492 TAGACGAAGGCGAGGACTTT 58.458 50.000 0.00 0.00 41.64 2.66
2006 2145 1.542492 TTAGACGAAGGCGAGGACTT 58.458 50.000 0.00 0.00 41.64 3.01
2007 2146 1.542492 TTTAGACGAAGGCGAGGACT 58.458 50.000 0.00 0.00 41.64 3.85
2008 2147 2.358939 TTTTAGACGAAGGCGAGGAC 57.641 50.000 0.00 0.00 41.64 3.85
2075 2214 2.959707 TCGGCTGTGGTGGTAAATTTTT 59.040 40.909 0.00 0.00 0.00 1.94
2076 2215 2.295070 GTCGGCTGTGGTGGTAAATTTT 59.705 45.455 0.00 0.00 0.00 1.82
2077 2216 1.883926 GTCGGCTGTGGTGGTAAATTT 59.116 47.619 0.00 0.00 0.00 1.82
2078 2217 1.530323 GTCGGCTGTGGTGGTAAATT 58.470 50.000 0.00 0.00 0.00 1.82
2079 2218 0.322187 GGTCGGCTGTGGTGGTAAAT 60.322 55.000 0.00 0.00 0.00 1.40
2080 2219 1.071814 GGTCGGCTGTGGTGGTAAA 59.928 57.895 0.00 0.00 0.00 2.01
2081 2220 2.107041 CTGGTCGGCTGTGGTGGTAA 62.107 60.000 0.00 0.00 0.00 2.85
2082 2221 2.524640 TGGTCGGCTGTGGTGGTA 60.525 61.111 0.00 0.00 0.00 3.25
2083 2222 3.941188 CTGGTCGGCTGTGGTGGT 61.941 66.667 0.00 0.00 0.00 4.16
2084 2223 3.941188 ACTGGTCGGCTGTGGTGG 61.941 66.667 0.00 0.00 0.00 4.61
2085 2224 2.666190 CACTGGTCGGCTGTGGTG 60.666 66.667 5.94 0.00 0.00 4.17
2086 2225 2.842462 TCACTGGTCGGCTGTGGT 60.842 61.111 12.18 0.00 33.04 4.16
2087 2226 2.047844 CTCACTGGTCGGCTGTGG 60.048 66.667 12.18 2.32 33.04 4.17
2088 2227 1.665916 CACTCACTGGTCGGCTGTG 60.666 63.158 7.24 7.24 0.00 3.66
2089 2228 2.737180 CACTCACTGGTCGGCTGT 59.263 61.111 0.00 0.00 0.00 4.40
2090 2229 2.740055 GCACTCACTGGTCGGCTG 60.740 66.667 0.00 0.00 0.00 4.85
2091 2230 2.807107 TTGCACTCACTGGTCGGCT 61.807 57.895 0.00 0.00 0.00 5.52
2092 2231 2.280797 TTGCACTCACTGGTCGGC 60.281 61.111 0.00 0.00 0.00 5.54
2093 2232 0.532862 AAGTTGCACTCACTGGTCGG 60.533 55.000 0.00 0.00 0.00 4.79
2094 2233 1.003545 CAAAGTTGCACTCACTGGTCG 60.004 52.381 0.00 0.00 0.00 4.79
2095 2234 1.334869 CCAAAGTTGCACTCACTGGTC 59.665 52.381 0.00 0.00 0.00 4.02
2096 2235 1.064758 TCCAAAGTTGCACTCACTGGT 60.065 47.619 0.00 0.00 0.00 4.00
2097 2236 1.679139 TCCAAAGTTGCACTCACTGG 58.321 50.000 0.00 0.00 0.00 4.00
2098 2237 4.320494 GGTTATCCAAAGTTGCACTCACTG 60.320 45.833 0.00 0.00 0.00 3.66
2099 2238 3.821033 GGTTATCCAAAGTTGCACTCACT 59.179 43.478 0.00 0.00 0.00 3.41
2100 2239 3.057526 GGGTTATCCAAAGTTGCACTCAC 60.058 47.826 0.00 0.00 35.00 3.51
2101 2240 3.153919 GGGTTATCCAAAGTTGCACTCA 58.846 45.455 0.00 0.00 35.00 3.41
2102 2241 3.421844 AGGGTTATCCAAAGTTGCACTC 58.578 45.455 0.00 0.00 38.24 3.51
2103 2242 3.181434 TGAGGGTTATCCAAAGTTGCACT 60.181 43.478 0.00 0.00 38.24 4.40
2104 2243 3.153919 TGAGGGTTATCCAAAGTTGCAC 58.846 45.455 0.00 0.00 38.24 4.57
2105 2244 3.517296 TGAGGGTTATCCAAAGTTGCA 57.483 42.857 0.00 0.00 38.24 4.08
2106 2245 5.405935 AAATGAGGGTTATCCAAAGTTGC 57.594 39.130 0.00 0.00 38.24 4.17
2107 2246 9.771534 TTTTTAAATGAGGGTTATCCAAAGTTG 57.228 29.630 0.00 0.00 38.24 3.16
2142 2281 1.486211 TTTCGATGGAGAGGAGGACC 58.514 55.000 0.00 0.00 0.00 4.46
2143 2282 3.611766 TTTTTCGATGGAGAGGAGGAC 57.388 47.619 0.00 0.00 0.00 3.85
2175 2314 9.308000 TGTTTAGATGAAGGTGTGGATTATTTT 57.692 29.630 0.00 0.00 0.00 1.82
2176 2315 8.877864 TGTTTAGATGAAGGTGTGGATTATTT 57.122 30.769 0.00 0.00 0.00 1.40
2177 2316 8.877864 TTGTTTAGATGAAGGTGTGGATTATT 57.122 30.769 0.00 0.00 0.00 1.40
2178 2317 8.877864 TTTGTTTAGATGAAGGTGTGGATTAT 57.122 30.769 0.00 0.00 0.00 1.28
2179 2318 8.698973 TTTTGTTTAGATGAAGGTGTGGATTA 57.301 30.769 0.00 0.00 0.00 1.75
2180 2319 7.595819 TTTTGTTTAGATGAAGGTGTGGATT 57.404 32.000 0.00 0.00 0.00 3.01
2181 2320 7.781324 ATTTTGTTTAGATGAAGGTGTGGAT 57.219 32.000 0.00 0.00 0.00 3.41
2182 2321 7.595819 AATTTTGTTTAGATGAAGGTGTGGA 57.404 32.000 0.00 0.00 0.00 4.02
2183 2322 8.356657 TGTAATTTTGTTTAGATGAAGGTGTGG 58.643 33.333 0.00 0.00 0.00 4.17
2184 2323 9.743057 TTGTAATTTTGTTTAGATGAAGGTGTG 57.257 29.630 0.00 0.00 0.00 3.82
2198 2337 9.030301 CGGTGAGAAATCTTTTGTAATTTTGTT 57.970 29.630 0.00 0.00 0.00 2.83
2199 2338 7.169140 GCGGTGAGAAATCTTTTGTAATTTTGT 59.831 33.333 0.00 0.00 0.00 2.83
2200 2339 7.501515 GCGGTGAGAAATCTTTTGTAATTTTG 58.498 34.615 0.00 0.00 0.00 2.44
2201 2340 6.362283 CGCGGTGAGAAATCTTTTGTAATTTT 59.638 34.615 0.00 0.00 0.00 1.82
2202 2341 5.856455 CGCGGTGAGAAATCTTTTGTAATTT 59.144 36.000 0.00 0.00 0.00 1.82
2203 2342 5.390613 CGCGGTGAGAAATCTTTTGTAATT 58.609 37.500 0.00 0.00 0.00 1.40
2204 2343 4.142687 CCGCGGTGAGAAATCTTTTGTAAT 60.143 41.667 19.50 0.00 0.00 1.89
2205 2344 3.187637 CCGCGGTGAGAAATCTTTTGTAA 59.812 43.478 19.50 0.00 0.00 2.41
2206 2345 2.739913 CCGCGGTGAGAAATCTTTTGTA 59.260 45.455 19.50 0.00 0.00 2.41
2207 2346 1.535462 CCGCGGTGAGAAATCTTTTGT 59.465 47.619 19.50 0.00 0.00 2.83
2208 2347 1.729149 GCCGCGGTGAGAAATCTTTTG 60.729 52.381 28.70 0.00 0.00 2.44
2209 2348 0.521735 GCCGCGGTGAGAAATCTTTT 59.478 50.000 28.70 0.00 0.00 2.27
2210 2349 1.305930 GGCCGCGGTGAGAAATCTTT 61.306 55.000 28.70 0.00 0.00 2.52
2211 2350 1.745489 GGCCGCGGTGAGAAATCTT 60.745 57.895 28.70 0.00 0.00 2.40
2212 2351 2.125106 GGCCGCGGTGAGAAATCT 60.125 61.111 28.70 0.00 0.00 2.40
2213 2352 2.038269 TTGGCCGCGGTGAGAAATC 61.038 57.895 28.70 6.82 0.00 2.17
2214 2353 2.033448 TTGGCCGCGGTGAGAAAT 59.967 55.556 28.70 0.00 0.00 2.17
2215 2354 2.975799 GTTGGCCGCGGTGAGAAA 60.976 61.111 28.70 11.29 0.00 2.52
2226 2365 4.043200 GACGCAAGCTGGTTGGCC 62.043 66.667 19.87 0.00 45.62 5.36
2227 2366 3.286751 TGACGCAAGCTGGTTGGC 61.287 61.111 19.87 11.61 45.62 4.52
2228 2367 1.518056 ATGTGACGCAAGCTGGTTGG 61.518 55.000 19.87 12.63 45.62 3.77
2229 2368 0.386352 CATGTGACGCAAGCTGGTTG 60.386 55.000 14.86 14.86 45.62 3.77
2230 2369 1.518056 CCATGTGACGCAAGCTGGTT 61.518 55.000 0.00 0.00 45.62 3.67
2231 2370 1.968017 CCATGTGACGCAAGCTGGT 60.968 57.895 0.00 0.00 45.62 4.00
2232 2371 2.872557 CCATGTGACGCAAGCTGG 59.127 61.111 0.00 0.00 45.62 4.85
2233 2372 1.929806 ATGCCATGTGACGCAAGCTG 61.930 55.000 13.55 0.00 45.62 4.24
2234 2373 0.392863 TATGCCATGTGACGCAAGCT 60.393 50.000 13.55 0.00 45.62 3.74
2235 2374 0.028505 CTATGCCATGTGACGCAAGC 59.971 55.000 7.29 7.29 45.62 4.01
2236 2375 1.372582 ACTATGCCATGTGACGCAAG 58.627 50.000 0.00 0.00 38.75 4.01
2237 2376 1.468127 CAACTATGCCATGTGACGCAA 59.532 47.619 0.00 0.00 38.75 4.85
2238 2377 1.085893 CAACTATGCCATGTGACGCA 58.914 50.000 0.00 0.00 39.79 5.24
2239 2378 0.378257 CCAACTATGCCATGTGACGC 59.622 55.000 0.00 0.00 0.00 5.19
2240 2379 1.737838 ACCAACTATGCCATGTGACG 58.262 50.000 0.00 0.00 0.00 4.35
2241 2380 2.164219 CCAACCAACTATGCCATGTGAC 59.836 50.000 0.00 0.00 0.00 3.67
2242 2381 2.445427 CCAACCAACTATGCCATGTGA 58.555 47.619 0.00 0.00 0.00 3.58
2243 2382 1.135024 GCCAACCAACTATGCCATGTG 60.135 52.381 0.00 0.00 0.00 3.21
2244 2383 1.185315 GCCAACCAACTATGCCATGT 58.815 50.000 0.00 0.00 0.00 3.21
2245 2384 0.461135 GGCCAACCAACTATGCCATG 59.539 55.000 0.00 0.00 41.76 3.66
2246 2385 0.040942 TGGCCAACCAACTATGCCAT 59.959 50.000 0.61 0.00 46.57 4.40
2247 2386 4.432601 GGCCAACCAACTATGCCA 57.567 55.556 0.00 0.00 41.76 4.92
2248 2387 4.432601 TGGCCAACCAACTATGCC 57.567 55.556 0.61 0.00 45.37 4.40
2266 2405 0.874607 ATTAAGCTACGCGCGAAGGG 60.875 55.000 39.36 22.12 45.59 3.95
2267 2406 1.714460 CTATTAAGCTACGCGCGAAGG 59.286 52.381 39.36 24.62 45.59 3.46
2268 2407 1.714460 CCTATTAAGCTACGCGCGAAG 59.286 52.381 39.36 16.79 45.59 3.79
2269 2408 1.066002 ACCTATTAAGCTACGCGCGAA 59.934 47.619 39.36 19.92 45.59 4.70
2270 2409 0.664761 ACCTATTAAGCTACGCGCGA 59.335 50.000 39.36 19.16 45.59 5.87
2271 2410 1.484356 AACCTATTAAGCTACGCGCG 58.516 50.000 30.96 30.96 45.59 6.86
2272 2411 4.505556 AGTTAAACCTATTAAGCTACGCGC 59.494 41.667 5.73 0.00 39.57 6.86
2273 2412 6.914757 ACTAGTTAAACCTATTAAGCTACGCG 59.085 38.462 3.53 3.53 0.00 6.01
2274 2413 7.917505 TCACTAGTTAAACCTATTAAGCTACGC 59.082 37.037 0.00 0.00 0.00 4.42
2275 2414 9.962783 ATCACTAGTTAAACCTATTAAGCTACG 57.037 33.333 0.00 0.00 0.00 3.51
2278 2417 9.614792 CCAATCACTAGTTAAACCTATTAAGCT 57.385 33.333 0.00 0.00 0.00 3.74
2279 2418 8.837389 CCCAATCACTAGTTAAACCTATTAAGC 58.163 37.037 0.00 0.00 0.00 3.09
2280 2419 9.338622 CCCCAATCACTAGTTAAACCTATTAAG 57.661 37.037 0.00 0.00 0.00 1.85
2281 2420 7.776500 GCCCCAATCACTAGTTAAACCTATTAA 59.224 37.037 0.00 0.00 0.00 1.40
2282 2421 7.092354 TGCCCCAATCACTAGTTAAACCTATTA 60.092 37.037 0.00 0.00 0.00 0.98
2283 2422 6.127101 GCCCCAATCACTAGTTAAACCTATT 58.873 40.000 0.00 0.00 0.00 1.73
2284 2423 5.192923 TGCCCCAATCACTAGTTAAACCTAT 59.807 40.000 0.00 0.00 0.00 2.57
2285 2424 4.536888 TGCCCCAATCACTAGTTAAACCTA 59.463 41.667 0.00 0.00 0.00 3.08
2286 2425 3.332485 TGCCCCAATCACTAGTTAAACCT 59.668 43.478 0.00 0.00 0.00 3.50
2287 2426 3.442625 GTGCCCCAATCACTAGTTAAACC 59.557 47.826 0.00 0.00 0.00 3.27
2288 2427 3.442625 GGTGCCCCAATCACTAGTTAAAC 59.557 47.826 0.00 0.00 34.97 2.01
2289 2428 3.074687 TGGTGCCCCAATCACTAGTTAAA 59.925 43.478 0.00 0.00 37.98 1.52
2290 2429 2.645297 TGGTGCCCCAATCACTAGTTAA 59.355 45.455 0.00 0.00 37.98 2.01
2291 2430 2.026636 GTGGTGCCCCAATCACTAGTTA 60.027 50.000 0.00 0.00 44.15 2.24
2292 2431 1.072266 TGGTGCCCCAATCACTAGTT 58.928 50.000 0.00 0.00 37.98 2.24
2293 2432 0.328258 GTGGTGCCCCAATCACTAGT 59.672 55.000 0.00 0.00 44.15 2.57
2294 2433 0.394352 GGTGGTGCCCCAATCACTAG 60.394 60.000 0.00 0.00 44.15 2.57
2295 2434 0.844661 AGGTGGTGCCCCAATCACTA 60.845 55.000 0.00 0.00 44.15 2.74
2296 2435 1.729267 AAGGTGGTGCCCCAATCACT 61.729 55.000 0.00 0.00 44.15 3.41
2297 2436 1.228862 AAGGTGGTGCCCCAATCAC 60.229 57.895 0.00 0.00 44.15 3.06
2298 2437 1.228831 CAAGGTGGTGCCCCAATCA 60.229 57.895 0.00 0.00 44.15 2.57
2299 2438 1.228862 ACAAGGTGGTGCCCCAATC 60.229 57.895 0.00 0.00 44.15 2.67
2300 2439 1.533753 CACAAGGTGGTGCCCCAAT 60.534 57.895 0.00 0.00 44.15 3.16
2301 2440 2.123511 CACAAGGTGGTGCCCCAA 60.124 61.111 0.00 0.00 44.15 4.12
2311 2450 4.974721 CAAGGGGCGCCACAAGGT 62.975 66.667 34.08 6.98 37.19 3.50
2312 2451 4.659172 TCAAGGGGCGCCACAAGG 62.659 66.667 34.08 19.87 38.23 3.61
2313 2452 2.826777 ATCTCAAGGGGCGCCACAAG 62.827 60.000 34.08 24.28 0.00 3.16
2314 2453 2.905996 ATCTCAAGGGGCGCCACAA 61.906 57.895 34.08 15.27 0.00 3.33
2315 2454 3.329889 ATCTCAAGGGGCGCCACA 61.330 61.111 34.08 10.52 0.00 4.17
2316 2455 2.819984 TTCATCTCAAGGGGCGCCAC 62.820 60.000 30.85 28.13 0.00 5.01
2317 2456 2.541547 CTTCATCTCAAGGGGCGCCA 62.542 60.000 30.85 5.63 0.00 5.69
2318 2457 1.821332 CTTCATCTCAAGGGGCGCC 60.821 63.158 21.18 21.18 0.00 6.53
2319 2458 2.476320 GCTTCATCTCAAGGGGCGC 61.476 63.158 0.00 0.00 0.00 6.53
2320 2459 1.094073 CAGCTTCATCTCAAGGGGCG 61.094 60.000 0.00 0.00 0.00 6.13
2321 2460 0.034670 ACAGCTTCATCTCAAGGGGC 60.035 55.000 0.00 0.00 0.00 5.80
2322 2461 1.747709 CACAGCTTCATCTCAAGGGG 58.252 55.000 0.00 0.00 0.00 4.79
2323 2462 1.093159 GCACAGCTTCATCTCAAGGG 58.907 55.000 0.00 0.00 0.00 3.95
2324 2463 0.725686 CGCACAGCTTCATCTCAAGG 59.274 55.000 0.00 0.00 0.00 3.61
2325 2464 0.096628 GCGCACAGCTTCATCTCAAG 59.903 55.000 0.30 0.00 44.04 3.02
2326 2465 2.165380 GCGCACAGCTTCATCTCAA 58.835 52.632 0.30 0.00 44.04 3.02
2327 2466 3.880591 GCGCACAGCTTCATCTCA 58.119 55.556 0.30 0.00 44.04 3.27
2334 2473 8.658608 TTTCAATAGAAATGTGCGCACAGCTT 62.659 38.462 41.77 35.49 45.48 3.74
2335 2474 7.278737 TTTCAATAGAAATGTGCGCACAGCT 62.279 40.000 41.77 36.09 45.48 4.24
2336 2475 2.159531 TCAATAGAAATGTGCGCACAGC 60.160 45.455 41.77 32.46 45.48 4.40
2337 2476 3.745332 TCAATAGAAATGTGCGCACAG 57.255 42.857 41.77 27.72 45.48 3.66
2338 2477 4.495911 TTTCAATAGAAATGTGCGCACA 57.504 36.364 41.97 41.97 46.44 4.57
2339 2478 5.820926 TTTTTCAATAGAAATGTGCGCAC 57.179 34.783 33.11 33.11 42.90 5.34
2358 2497 7.648039 AGACTCGAGGACTCTATGTATTTTT 57.352 36.000 18.41 0.00 0.00 1.94
2359 2498 7.648039 AAGACTCGAGGACTCTATGTATTTT 57.352 36.000 18.41 0.00 0.00 1.82
2360 2499 7.266922 GAAGACTCGAGGACTCTATGTATTT 57.733 40.000 18.41 0.00 0.00 1.40
2361 2500 6.870971 GAAGACTCGAGGACTCTATGTATT 57.129 41.667 18.41 0.00 0.00 1.89
2379 2518 1.722011 TTTTCGATGGAGGCGAAGAC 58.278 50.000 0.00 0.00 46.73 3.01
2380 2519 2.465860 TTTTTCGATGGAGGCGAAGA 57.534 45.000 0.00 0.00 46.73 2.87
2430 2569 5.243060 GGTAGGCTGTTGTGGTATTCTTTTT 59.757 40.000 0.00 0.00 0.00 1.94
2431 2570 4.765339 GGTAGGCTGTTGTGGTATTCTTTT 59.235 41.667 0.00 0.00 0.00 2.27
2432 2571 4.202524 TGGTAGGCTGTTGTGGTATTCTTT 60.203 41.667 0.00 0.00 0.00 2.52
2433 2572 3.329520 TGGTAGGCTGTTGTGGTATTCTT 59.670 43.478 0.00 0.00 0.00 2.52
2434 2573 2.910319 TGGTAGGCTGTTGTGGTATTCT 59.090 45.455 0.00 0.00 0.00 2.40
2435 2574 3.270877 CTGGTAGGCTGTTGTGGTATTC 58.729 50.000 0.00 0.00 0.00 1.75
2436 2575 2.618045 GCTGGTAGGCTGTTGTGGTATT 60.618 50.000 0.00 0.00 0.00 1.89
2437 2576 1.065418 GCTGGTAGGCTGTTGTGGTAT 60.065 52.381 0.00 0.00 0.00 2.73
2438 2577 0.323629 GCTGGTAGGCTGTTGTGGTA 59.676 55.000 0.00 0.00 0.00 3.25
2439 2578 1.073199 GCTGGTAGGCTGTTGTGGT 59.927 57.895 0.00 0.00 0.00 4.16
2440 2579 2.034879 CGCTGGTAGGCTGTTGTGG 61.035 63.158 0.00 0.00 0.00 4.17
2441 2580 1.005037 TCGCTGGTAGGCTGTTGTG 60.005 57.895 0.00 0.00 0.00 3.33
2442 2581 1.293498 CTCGCTGGTAGGCTGTTGT 59.707 57.895 0.00 0.00 0.00 3.32
2443 2582 1.016130 CACTCGCTGGTAGGCTGTTG 61.016 60.000 0.00 0.00 0.00 3.33
2444 2583 1.293498 CACTCGCTGGTAGGCTGTT 59.707 57.895 0.00 0.00 0.00 3.16
2445 2584 2.973899 CACTCGCTGGTAGGCTGT 59.026 61.111 0.00 0.00 0.00 4.40
2446 2585 2.510238 GCACTCGCTGGTAGGCTG 60.510 66.667 0.00 0.00 34.30 4.85
2447 2586 3.775654 GGCACTCGCTGGTAGGCT 61.776 66.667 0.00 0.00 38.60 4.58
2448 2587 4.082523 TGGCACTCGCTGGTAGGC 62.083 66.667 0.00 0.00 38.60 3.93
2449 2588 2.125512 GTGGCACTCGCTGGTAGG 60.126 66.667 11.13 0.00 38.60 3.18
2450 2589 0.320771 AAAGTGGCACTCGCTGGTAG 60.321 55.000 22.31 0.00 38.60 3.18
2451 2590 0.602638 CAAAGTGGCACTCGCTGGTA 60.603 55.000 22.31 0.00 38.60 3.25
2452 2591 1.893808 CAAAGTGGCACTCGCTGGT 60.894 57.895 22.31 0.07 38.60 4.00
2453 2592 2.949106 CAAAGTGGCACTCGCTGG 59.051 61.111 22.31 0.00 38.60 4.85
2454 2593 2.253452 GCAAAGTGGCACTCGCTG 59.747 61.111 26.14 21.11 38.60 5.18
2455 2594 2.203195 TGCAAAGTGGCACTCGCT 60.203 55.556 30.33 12.89 39.25 4.93
2462 2601 0.817654 GGAGGGTTATGCAAAGTGGC 59.182 55.000 0.00 0.00 0.00 5.01
2463 2602 2.214376 TGGAGGGTTATGCAAAGTGG 57.786 50.000 0.00 0.00 0.00 4.00
2464 2603 4.806640 AAATGGAGGGTTATGCAAAGTG 57.193 40.909 0.00 0.00 0.00 3.16
2465 2604 6.926630 TTTAAATGGAGGGTTATGCAAAGT 57.073 33.333 0.00 0.00 0.00 2.66
2469 2608 9.084533 GGTATATTTTAAATGGAGGGTTATGCA 57.915 33.333 0.00 0.00 0.00 3.96
2470 2609 9.084533 TGGTATATTTTAAATGGAGGGTTATGC 57.915 33.333 0.00 0.00 0.00 3.14
2474 2613 8.004801 CCTCTGGTATATTTTAAATGGAGGGTT 58.995 37.037 0.00 0.00 34.67 4.11
2475 2614 7.130442 ACCTCTGGTATATTTTAAATGGAGGGT 59.870 37.037 0.00 0.00 40.36 4.34
2476 2615 7.526918 ACCTCTGGTATATTTTAAATGGAGGG 58.473 38.462 0.00 0.00 40.36 4.30
2477 2616 7.665974 GGACCTCTGGTATATTTTAAATGGAGG 59.334 40.741 0.00 0.00 41.40 4.30
2478 2617 8.440771 AGGACCTCTGGTATATTTTAAATGGAG 58.559 37.037 0.00 0.00 35.25 3.86
2479 2618 8.344939 AGGACCTCTGGTATATTTTAAATGGA 57.655 34.615 0.00 0.00 35.25 3.41
2480 2619 8.440771 AGAGGACCTCTGGTATATTTTAAATGG 58.559 37.037 23.72 0.00 39.62 3.16
2481 2620 9.853177 AAGAGGACCTCTGGTATATTTTAAATG 57.147 33.333 24.98 0.00 40.28 2.32
2483 2622 9.280456 AGAAGAGGACCTCTGGTATATTTTAAA 57.720 33.333 24.98 0.00 40.28 1.52
2484 2623 8.855804 AGAAGAGGACCTCTGGTATATTTTAA 57.144 34.615 24.98 0.00 40.28 1.52
2485 2624 8.855804 AAGAAGAGGACCTCTGGTATATTTTA 57.144 34.615 24.98 0.00 40.28 1.52
2486 2625 7.403231 TGAAGAAGAGGACCTCTGGTATATTTT 59.597 37.037 24.98 9.23 40.28 1.82
2487 2626 6.903534 TGAAGAAGAGGACCTCTGGTATATTT 59.096 38.462 24.98 6.27 40.28 1.40
2488 2627 6.444704 TGAAGAAGAGGACCTCTGGTATATT 58.555 40.000 24.98 12.27 40.28 1.28
2489 2628 6.031964 TGAAGAAGAGGACCTCTGGTATAT 57.968 41.667 24.98 7.85 40.28 0.86
2490 2629 5.467668 TGAAGAAGAGGACCTCTGGTATA 57.532 43.478 24.98 9.10 40.28 1.47
2491 2630 4.338795 TGAAGAAGAGGACCTCTGGTAT 57.661 45.455 24.98 9.06 40.28 2.73
2492 2631 3.827817 TGAAGAAGAGGACCTCTGGTA 57.172 47.619 24.98 7.36 40.28 3.25
2493 2632 2.704190 TGAAGAAGAGGACCTCTGGT 57.296 50.000 24.98 10.26 40.28 4.00
2494 2633 3.373830 AGATGAAGAAGAGGACCTCTGG 58.626 50.000 24.98 0.00 40.28 3.86
2495 2634 6.537453 TTTAGATGAAGAAGAGGACCTCTG 57.463 41.667 24.98 0.00 40.28 3.35
2496 2635 7.456269 TCTTTTTAGATGAAGAAGAGGACCTCT 59.544 37.037 18.94 18.94 43.37 3.69
2497 2636 7.616313 TCTTTTTAGATGAAGAAGAGGACCTC 58.384 38.462 14.15 14.15 34.27 3.85
2498 2637 7.560796 TCTTTTTAGATGAAGAAGAGGACCT 57.439 36.000 0.00 0.00 34.27 3.85
2499 2638 8.622948 TTTCTTTTTAGATGAAGAAGAGGACC 57.377 34.615 0.00 0.00 41.40 4.46
2558 2697 8.547894 GCGGTGAGAAATCTTTTACAAATTTTT 58.452 29.630 0.00 0.00 0.00 1.94
2559 2698 7.096230 CGCGGTGAGAAATCTTTTACAAATTTT 60.096 33.333 0.00 0.00 0.00 1.82
2560 2699 6.362283 CGCGGTGAGAAATCTTTTACAAATTT 59.638 34.615 0.00 0.00 0.00 1.82
2561 2700 5.856455 CGCGGTGAGAAATCTTTTACAAATT 59.144 36.000 0.00 0.00 0.00 1.82
2562 2701 5.390613 CGCGGTGAGAAATCTTTTACAAAT 58.609 37.500 0.00 0.00 0.00 2.32
2563 2702 4.319911 CCGCGGTGAGAAATCTTTTACAAA 60.320 41.667 19.50 0.00 0.00 2.83
2564 2703 3.187637 CCGCGGTGAGAAATCTTTTACAA 59.812 43.478 19.50 0.00 0.00 2.41
2565 2704 2.739913 CCGCGGTGAGAAATCTTTTACA 59.260 45.455 19.50 0.00 0.00 2.41
2566 2705 2.475685 GCCGCGGTGAGAAATCTTTTAC 60.476 50.000 28.70 0.00 0.00 2.01
2567 2706 1.735571 GCCGCGGTGAGAAATCTTTTA 59.264 47.619 28.70 0.00 0.00 1.52
2568 2707 0.521735 GCCGCGGTGAGAAATCTTTT 59.478 50.000 28.70 0.00 0.00 2.27
2569 2708 1.305930 GGCCGCGGTGAGAAATCTTT 61.306 55.000 28.70 0.00 0.00 2.52
2570 2709 1.745489 GGCCGCGGTGAGAAATCTT 60.745 57.895 28.70 0.00 0.00 2.40
2571 2710 2.125106 GGCCGCGGTGAGAAATCT 60.125 61.111 28.70 0.00 0.00 2.40
2572 2711 2.038269 TTGGCCGCGGTGAGAAATC 61.038 57.895 28.70 6.82 0.00 2.17
2573 2712 2.033448 TTGGCCGCGGTGAGAAAT 59.967 55.556 28.70 0.00 0.00 2.17
2574 2713 2.975799 GTTGGCCGCGGTGAGAAA 60.976 61.111 28.70 11.29 0.00 2.52
2595 2734 1.927210 CTATGCTACGTGGCGCAAG 59.073 57.895 19.46 11.90 39.89 4.01
2596 2735 2.171079 GCTATGCTACGTGGCGCAA 61.171 57.895 19.46 1.72 39.89 4.85
2597 2736 2.584970 GCTATGCTACGTGGCGCA 60.585 61.111 19.46 14.63 40.87 6.09
2598 2737 2.279517 AGCTATGCTACGTGGCGC 60.280 61.111 19.46 15.97 36.99 6.53
2599 2738 1.951130 CCAGCTATGCTACGTGGCG 60.951 63.158 19.46 6.16 36.40 5.69
2600 2739 4.033894 CCAGCTATGCTACGTGGC 57.966 61.111 18.00 18.00 36.40 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.