Multiple sequence alignment - TraesCS2D01G289800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G289800 chr2D 100.000 2379 0 0 1 2379 371926718 371924340 0.000000e+00 4394
1 TraesCS2D01G289800 chr2D 99.026 308 3 0 1 308 547785783 547785476 1.230000e-153 553
2 TraesCS2D01G289800 chr2D 98.689 305 4 0 3 307 2574272 2574576 2.660000e-150 542
3 TraesCS2D01G289800 chr2D 100.000 179 0 0 2854 3032 371923865 371923687 6.270000e-87 331
4 TraesCS2D01G289800 chr2B 93.384 1315 63 17 317 1622 441081676 441080377 0.000000e+00 1925
5 TraesCS2D01G289800 chr2B 94.953 634 28 2 1748 2379 441080302 441079671 0.000000e+00 990
6 TraesCS2D01G289800 chr2A 94.472 1212 56 8 469 1674 502628316 502627110 0.000000e+00 1857
7 TraesCS2D01G289800 chr2A 95.483 642 19 3 1748 2379 502627061 502626420 0.000000e+00 1016
8 TraesCS2D01G289800 chr2A 92.683 82 4 1 317 396 502628398 502628317 1.910000e-22 117
9 TraesCS2D01G289800 chr5D 99.679 312 1 0 1 312 552737869 552737558 3.390000e-159 571
10 TraesCS2D01G289800 chr5D 98.697 307 3 1 1 307 193615160 193614855 7.390000e-151 544
11 TraesCS2D01G289800 chr5D 98.355 304 5 0 3 306 113850569 113850266 4.450000e-148 534
12 TraesCS2D01G289800 chr1D 98.710 310 3 1 1 309 410457409 410457718 1.590000e-152 549
13 TraesCS2D01G289800 chr4D 98.371 307 5 0 1 307 450218658 450218352 9.560000e-150 540
14 TraesCS2D01G289800 chr4D 97.720 307 6 1 1 306 98862098 98862404 7.450000e-146 527
15 TraesCS2D01G289800 chr6D 97.411 309 7 1 1 309 448783717 448784024 2.680000e-145 525


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G289800 chr2D 371923687 371926718 3031 True 2362.500000 4394 100.000000 1 3032 2 chr2D.!!$R2 3031
1 TraesCS2D01G289800 chr2B 441079671 441081676 2005 True 1457.500000 1925 94.168500 317 2379 2 chr2B.!!$R1 2062
2 TraesCS2D01G289800 chr2A 502626420 502628398 1978 True 996.666667 1857 94.212667 317 2379 3 chr2A.!!$R1 2062

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
57 58 0.031994 GTGGTGTCAATGGTTGGTGC 59.968 55.0 0.0 0.0 0.00 5.01 F
235 236 0.034059 CCTAGTTATGCAGAGGCCGG 59.966 60.0 0.0 0.0 40.13 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1705 1721 0.108615 CTGTCAGTGGGGCTAACGAG 60.109 60.0 0.0 0.0 0.0 4.18 R
2116 2159 0.596859 GCACGCTACGGTCTTATCCC 60.597 60.0 0.0 0.0 0.0 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.842208 TCTTGAAGGCGTTGTTGTTG 57.158 45.000 0.00 0.00 0.00 3.33
20 21 2.360844 TCTTGAAGGCGTTGTTGTTGA 58.639 42.857 0.00 0.00 0.00 3.18
21 22 2.750166 TCTTGAAGGCGTTGTTGTTGAA 59.250 40.909 0.00 0.00 0.00 2.69
22 23 2.842208 TGAAGGCGTTGTTGTTGAAG 57.158 45.000 0.00 0.00 0.00 3.02
23 24 2.360844 TGAAGGCGTTGTTGTTGAAGA 58.639 42.857 0.00 0.00 0.00 2.87
24 25 2.948979 TGAAGGCGTTGTTGTTGAAGAT 59.051 40.909 0.00 0.00 0.00 2.40
25 26 3.003275 TGAAGGCGTTGTTGTTGAAGATC 59.997 43.478 0.00 0.00 0.00 2.75
26 27 1.880027 AGGCGTTGTTGTTGAAGATCC 59.120 47.619 0.00 0.00 0.00 3.36
27 28 1.880027 GGCGTTGTTGTTGAAGATCCT 59.120 47.619 0.00 0.00 0.00 3.24
28 29 2.095718 GGCGTTGTTGTTGAAGATCCTC 60.096 50.000 0.00 0.00 0.00 3.71
29 30 2.411547 GCGTTGTTGTTGAAGATCCTCG 60.412 50.000 0.00 0.00 0.00 4.63
30 31 2.800544 CGTTGTTGTTGAAGATCCTCGT 59.199 45.455 0.00 0.00 0.00 4.18
31 32 3.120991 CGTTGTTGTTGAAGATCCTCGTC 60.121 47.826 0.00 0.00 0.00 4.20
32 33 2.672714 TGTTGTTGAAGATCCTCGTCG 58.327 47.619 0.00 0.00 0.00 5.12
33 34 2.035449 TGTTGTTGAAGATCCTCGTCGT 59.965 45.455 0.00 0.00 0.00 4.34
34 35 2.631418 TGTTGAAGATCCTCGTCGTC 57.369 50.000 0.00 0.00 0.00 4.20
35 36 1.883926 TGTTGAAGATCCTCGTCGTCA 59.116 47.619 0.00 0.00 35.35 4.35
36 37 2.295070 TGTTGAAGATCCTCGTCGTCAA 59.705 45.455 2.03 2.03 41.86 3.18
37 38 3.056821 TGTTGAAGATCCTCGTCGTCAAT 60.057 43.478 8.13 0.00 44.34 2.57
38 39 3.150848 TGAAGATCCTCGTCGTCAATG 57.849 47.619 0.00 0.00 34.46 2.82
39 40 2.492088 TGAAGATCCTCGTCGTCAATGT 59.508 45.455 0.00 0.00 34.46 2.71
40 41 2.568696 AGATCCTCGTCGTCAATGTG 57.431 50.000 0.00 0.00 0.00 3.21
41 42 1.135139 AGATCCTCGTCGTCAATGTGG 59.865 52.381 0.00 0.00 0.00 4.17
42 43 0.895530 ATCCTCGTCGTCAATGTGGT 59.104 50.000 0.00 0.00 0.00 4.16
43 44 0.038618 TCCTCGTCGTCAATGTGGTG 60.039 55.000 0.00 0.00 0.00 4.17
44 45 0.319555 CCTCGTCGTCAATGTGGTGT 60.320 55.000 0.00 0.00 0.00 4.16
45 46 1.060713 CTCGTCGTCAATGTGGTGTC 58.939 55.000 0.00 0.00 0.00 3.67
46 47 0.386113 TCGTCGTCAATGTGGTGTCA 59.614 50.000 0.00 0.00 0.00 3.58
47 48 1.202428 TCGTCGTCAATGTGGTGTCAA 60.202 47.619 0.00 0.00 0.00 3.18
48 49 1.798223 CGTCGTCAATGTGGTGTCAAT 59.202 47.619 0.00 0.00 0.00 2.57
49 50 2.411418 CGTCGTCAATGTGGTGTCAATG 60.411 50.000 0.00 0.00 0.00 2.82
50 51 2.095768 GTCGTCAATGTGGTGTCAATGG 60.096 50.000 0.00 0.00 0.00 3.16
51 52 1.879380 CGTCAATGTGGTGTCAATGGT 59.121 47.619 0.00 0.00 0.00 3.55
52 53 2.293122 CGTCAATGTGGTGTCAATGGTT 59.707 45.455 0.00 0.00 0.00 3.67
53 54 3.641648 GTCAATGTGGTGTCAATGGTTG 58.358 45.455 0.00 0.00 0.00 3.77
54 55 2.627221 TCAATGTGGTGTCAATGGTTGG 59.373 45.455 0.00 0.00 0.00 3.77
55 56 2.364970 CAATGTGGTGTCAATGGTTGGT 59.635 45.455 0.00 0.00 0.00 3.67
56 57 1.397672 TGTGGTGTCAATGGTTGGTG 58.602 50.000 0.00 0.00 0.00 4.17
57 58 0.031994 GTGGTGTCAATGGTTGGTGC 59.968 55.000 0.00 0.00 0.00 5.01
58 59 1.285641 GGTGTCAATGGTTGGTGCG 59.714 57.895 0.00 0.00 0.00 5.34
59 60 1.285641 GTGTCAATGGTTGGTGCGG 59.714 57.895 0.00 0.00 0.00 5.69
60 61 1.149401 TGTCAATGGTTGGTGCGGA 59.851 52.632 0.00 0.00 0.00 5.54
61 62 0.251121 TGTCAATGGTTGGTGCGGAT 60.251 50.000 0.00 0.00 0.00 4.18
62 63 1.003696 TGTCAATGGTTGGTGCGGATA 59.996 47.619 0.00 0.00 0.00 2.59
63 64 2.297701 GTCAATGGTTGGTGCGGATAT 58.702 47.619 0.00 0.00 0.00 1.63
64 65 2.033299 GTCAATGGTTGGTGCGGATATG 59.967 50.000 0.00 0.00 0.00 1.78
65 66 1.337703 CAATGGTTGGTGCGGATATGG 59.662 52.381 0.00 0.00 0.00 2.74
66 67 0.550914 ATGGTTGGTGCGGATATGGT 59.449 50.000 0.00 0.00 0.00 3.55
67 68 0.107410 TGGTTGGTGCGGATATGGTC 60.107 55.000 0.00 0.00 0.00 4.02
68 69 1.157870 GGTTGGTGCGGATATGGTCG 61.158 60.000 0.00 0.00 0.00 4.79
75 76 3.967886 CGGATATGGTCGCAGTTCT 57.032 52.632 0.00 0.00 0.00 3.01
77 78 2.935042 CGGATATGGTCGCAGTTCTAG 58.065 52.381 0.00 0.00 0.00 2.43
78 79 2.293677 CGGATATGGTCGCAGTTCTAGT 59.706 50.000 0.00 0.00 0.00 2.57
79 80 3.243434 CGGATATGGTCGCAGTTCTAGTT 60.243 47.826 0.00 0.00 0.00 2.24
80 81 4.694339 GGATATGGTCGCAGTTCTAGTTT 58.306 43.478 0.00 0.00 0.00 2.66
81 82 4.508124 GGATATGGTCGCAGTTCTAGTTTG 59.492 45.833 0.00 0.00 0.00 2.93
82 83 2.902705 TGGTCGCAGTTCTAGTTTGT 57.097 45.000 0.00 0.00 0.00 2.83
83 84 2.750948 TGGTCGCAGTTCTAGTTTGTC 58.249 47.619 0.00 0.00 0.00 3.18
84 85 1.719780 GGTCGCAGTTCTAGTTTGTCG 59.280 52.381 0.00 0.00 0.00 4.35
85 86 2.391879 GTCGCAGTTCTAGTTTGTCGT 58.608 47.619 0.00 0.00 0.00 4.34
86 87 2.793232 GTCGCAGTTCTAGTTTGTCGTT 59.207 45.455 0.00 0.00 0.00 3.85
87 88 3.047796 TCGCAGTTCTAGTTTGTCGTTC 58.952 45.455 0.00 0.00 0.00 3.95
88 89 2.792674 CGCAGTTCTAGTTTGTCGTTCA 59.207 45.455 0.00 0.00 0.00 3.18
89 90 3.361724 CGCAGTTCTAGTTTGTCGTTCAC 60.362 47.826 0.00 0.00 0.00 3.18
90 91 3.802685 GCAGTTCTAGTTTGTCGTTCACT 59.197 43.478 0.00 0.00 0.00 3.41
91 92 4.318121 GCAGTTCTAGTTTGTCGTTCACTG 60.318 45.833 0.00 0.00 0.00 3.66
92 93 5.041287 CAGTTCTAGTTTGTCGTTCACTGA 58.959 41.667 0.00 0.00 0.00 3.41
93 94 5.692204 CAGTTCTAGTTTGTCGTTCACTGAT 59.308 40.000 0.00 0.00 0.00 2.90
94 95 5.921408 AGTTCTAGTTTGTCGTTCACTGATC 59.079 40.000 0.00 0.00 0.00 2.92
95 96 5.707242 TCTAGTTTGTCGTTCACTGATCT 57.293 39.130 0.00 0.00 0.00 2.75
96 97 5.461526 TCTAGTTTGTCGTTCACTGATCTG 58.538 41.667 0.00 0.00 0.00 2.90
97 98 4.322080 AGTTTGTCGTTCACTGATCTGA 57.678 40.909 6.60 0.00 0.00 3.27
98 99 4.887748 AGTTTGTCGTTCACTGATCTGAT 58.112 39.130 6.60 0.00 0.00 2.90
99 100 4.926238 AGTTTGTCGTTCACTGATCTGATC 59.074 41.667 10.72 10.72 0.00 2.92
100 101 3.136808 TGTCGTTCACTGATCTGATCG 57.863 47.619 12.65 7.69 35.56 3.69
101 102 1.849219 GTCGTTCACTGATCTGATCGC 59.151 52.381 12.65 1.64 34.66 4.58
102 103 1.745653 TCGTTCACTGATCTGATCGCT 59.254 47.619 12.65 0.00 34.66 4.93
103 104 2.164422 TCGTTCACTGATCTGATCGCTT 59.836 45.455 12.65 0.00 34.66 4.68
104 105 2.926200 CGTTCACTGATCTGATCGCTTT 59.074 45.455 12.65 0.00 0.00 3.51
105 106 3.241900 CGTTCACTGATCTGATCGCTTTG 60.242 47.826 12.65 7.10 0.00 2.77
106 107 2.897436 TCACTGATCTGATCGCTTTGG 58.103 47.619 12.65 0.37 0.00 3.28
107 108 1.938577 CACTGATCTGATCGCTTTGGG 59.061 52.381 12.65 0.00 0.00 4.12
108 109 1.134280 ACTGATCTGATCGCTTTGGGG 60.134 52.381 12.65 0.00 0.00 4.96
109 110 0.464373 TGATCTGATCGCTTTGGGGC 60.464 55.000 12.65 0.00 0.00 5.80
110 111 0.179034 GATCTGATCGCTTTGGGGCT 60.179 55.000 1.26 0.00 0.00 5.19
111 112 0.257039 ATCTGATCGCTTTGGGGCTT 59.743 50.000 0.00 0.00 0.00 4.35
112 113 0.038166 TCTGATCGCTTTGGGGCTTT 59.962 50.000 0.00 0.00 0.00 3.51
113 114 0.890683 CTGATCGCTTTGGGGCTTTT 59.109 50.000 0.00 0.00 0.00 2.27
114 115 1.273327 CTGATCGCTTTGGGGCTTTTT 59.727 47.619 0.00 0.00 0.00 1.94
148 149 7.391148 TTTCCTTTTCACACCTATTCATAGC 57.609 36.000 0.00 0.00 0.00 2.97
149 150 6.313519 TCCTTTTCACACCTATTCATAGCT 57.686 37.500 0.00 0.00 0.00 3.32
150 151 6.721318 TCCTTTTCACACCTATTCATAGCTT 58.279 36.000 0.00 0.00 0.00 3.74
151 152 7.175104 TCCTTTTCACACCTATTCATAGCTTT 58.825 34.615 0.00 0.00 0.00 3.51
152 153 7.669722 TCCTTTTCACACCTATTCATAGCTTTT 59.330 33.333 0.00 0.00 0.00 2.27
153 154 7.756722 CCTTTTCACACCTATTCATAGCTTTTG 59.243 37.037 0.00 0.00 0.00 2.44
154 155 6.757897 TTCACACCTATTCATAGCTTTTGG 57.242 37.500 0.00 0.00 0.00 3.28
155 156 5.815581 TCACACCTATTCATAGCTTTTGGT 58.184 37.500 0.00 0.00 0.00 3.67
156 157 5.880332 TCACACCTATTCATAGCTTTTGGTC 59.120 40.000 0.00 0.00 0.00 4.02
157 158 5.882557 CACACCTATTCATAGCTTTTGGTCT 59.117 40.000 0.00 0.00 0.00 3.85
158 159 6.375455 CACACCTATTCATAGCTTTTGGTCTT 59.625 38.462 0.00 0.00 0.00 3.01
159 160 7.552687 CACACCTATTCATAGCTTTTGGTCTTA 59.447 37.037 0.00 0.00 0.00 2.10
160 161 8.275040 ACACCTATTCATAGCTTTTGGTCTTAT 58.725 33.333 0.00 0.00 0.00 1.73
161 162 8.562892 CACCTATTCATAGCTTTTGGTCTTATG 58.437 37.037 0.00 0.00 0.00 1.90
162 163 8.494433 ACCTATTCATAGCTTTTGGTCTTATGA 58.506 33.333 0.00 0.00 0.00 2.15
163 164 8.778358 CCTATTCATAGCTTTTGGTCTTATGAC 58.222 37.037 0.00 0.10 42.22 3.06
164 165 9.553064 CTATTCATAGCTTTTGGTCTTATGACT 57.447 33.333 8.51 0.00 42.54 3.41
165 166 8.814038 ATTCATAGCTTTTGGTCTTATGACTT 57.186 30.769 8.51 0.00 42.54 3.01
166 167 8.635765 TTCATAGCTTTTGGTCTTATGACTTT 57.364 30.769 8.51 0.00 42.54 2.66
167 168 8.044060 TCATAGCTTTTGGTCTTATGACTTTG 57.956 34.615 8.51 0.00 42.54 2.77
168 169 5.126396 AGCTTTTGGTCTTATGACTTTGC 57.874 39.130 8.51 6.66 42.54 3.68
169 170 4.829492 AGCTTTTGGTCTTATGACTTTGCT 59.171 37.500 8.51 8.38 42.54 3.91
170 171 6.003950 AGCTTTTGGTCTTATGACTTTGCTA 58.996 36.000 8.51 0.00 42.54 3.49
171 172 6.150140 AGCTTTTGGTCTTATGACTTTGCTAG 59.850 38.462 8.51 0.00 42.54 3.42
172 173 6.072452 GCTTTTGGTCTTATGACTTTGCTAGT 60.072 38.462 8.51 0.00 42.54 2.57
181 182 2.480845 GACTTTGCTAGTCGTTGGTGT 58.519 47.619 4.22 0.00 43.59 4.16
182 183 2.210116 ACTTTGCTAGTCGTTGGTGTG 58.790 47.619 0.00 0.00 28.23 3.82
183 184 2.210116 CTTTGCTAGTCGTTGGTGTGT 58.790 47.619 0.00 0.00 0.00 3.72
184 185 2.319136 TTGCTAGTCGTTGGTGTGTT 57.681 45.000 0.00 0.00 0.00 3.32
185 186 2.319136 TGCTAGTCGTTGGTGTGTTT 57.681 45.000 0.00 0.00 0.00 2.83
186 187 2.634600 TGCTAGTCGTTGGTGTGTTTT 58.365 42.857 0.00 0.00 0.00 2.43
187 188 3.794717 TGCTAGTCGTTGGTGTGTTTTA 58.205 40.909 0.00 0.00 0.00 1.52
188 189 3.805422 TGCTAGTCGTTGGTGTGTTTTAG 59.195 43.478 0.00 0.00 0.00 1.85
189 190 3.363673 GCTAGTCGTTGGTGTGTTTTAGC 60.364 47.826 0.00 0.00 0.00 3.09
190 191 1.595794 AGTCGTTGGTGTGTTTTAGCG 59.404 47.619 0.00 0.00 0.00 4.26
191 192 1.328374 GTCGTTGGTGTGTTTTAGCGT 59.672 47.619 0.00 0.00 0.00 5.07
192 193 2.008329 TCGTTGGTGTGTTTTAGCGTT 58.992 42.857 0.00 0.00 0.00 4.84
193 194 2.419324 TCGTTGGTGTGTTTTAGCGTTT 59.581 40.909 0.00 0.00 0.00 3.60
194 195 2.528287 CGTTGGTGTGTTTTAGCGTTTG 59.472 45.455 0.00 0.00 0.00 2.93
195 196 3.503891 GTTGGTGTGTTTTAGCGTTTGT 58.496 40.909 0.00 0.00 0.00 2.83
196 197 3.138205 TGGTGTGTTTTAGCGTTTGTG 57.862 42.857 0.00 0.00 0.00 3.33
197 198 2.488545 TGGTGTGTTTTAGCGTTTGTGT 59.511 40.909 0.00 0.00 0.00 3.72
198 199 3.057456 TGGTGTGTTTTAGCGTTTGTGTT 60.057 39.130 0.00 0.00 0.00 3.32
199 200 3.302170 GGTGTGTTTTAGCGTTTGTGTTG 59.698 43.478 0.00 0.00 0.00 3.33
200 201 3.302170 GTGTGTTTTAGCGTTTGTGTTGG 59.698 43.478 0.00 0.00 0.00 3.77
201 202 2.855370 GTGTTTTAGCGTTTGTGTTGGG 59.145 45.455 0.00 0.00 0.00 4.12
202 203 2.492484 TGTTTTAGCGTTTGTGTTGGGT 59.508 40.909 0.00 0.00 0.00 4.51
203 204 3.056749 TGTTTTAGCGTTTGTGTTGGGTT 60.057 39.130 0.00 0.00 0.00 4.11
204 205 2.853731 TTAGCGTTTGTGTTGGGTTG 57.146 45.000 0.00 0.00 0.00 3.77
205 206 1.025812 TAGCGTTTGTGTTGGGTTGG 58.974 50.000 0.00 0.00 0.00 3.77
206 207 1.880796 GCGTTTGTGTTGGGTTGGC 60.881 57.895 0.00 0.00 0.00 4.52
207 208 1.813192 CGTTTGTGTTGGGTTGGCT 59.187 52.632 0.00 0.00 0.00 4.75
208 209 0.527385 CGTTTGTGTTGGGTTGGCTG 60.527 55.000 0.00 0.00 0.00 4.85
209 210 0.534873 GTTTGTGTTGGGTTGGCTGT 59.465 50.000 0.00 0.00 0.00 4.40
210 211 0.534412 TTTGTGTTGGGTTGGCTGTG 59.466 50.000 0.00 0.00 0.00 3.66
211 212 0.613292 TTGTGTTGGGTTGGCTGTGT 60.613 50.000 0.00 0.00 0.00 3.72
212 213 1.318886 TGTGTTGGGTTGGCTGTGTG 61.319 55.000 0.00 0.00 0.00 3.82
213 214 2.417097 GTTGGGTTGGCTGTGTGC 59.583 61.111 0.00 0.00 41.94 4.57
214 215 2.043551 TTGGGTTGGCTGTGTGCA 60.044 55.556 0.00 0.00 45.15 4.57
215 216 1.457267 TTGGGTTGGCTGTGTGCAT 60.457 52.632 0.00 0.00 45.15 3.96
216 217 1.462731 TTGGGTTGGCTGTGTGCATC 61.463 55.000 0.00 0.00 45.15 3.91
217 218 2.639327 GGGTTGGCTGTGTGCATCC 61.639 63.158 0.00 0.00 45.15 3.51
218 219 1.604593 GGTTGGCTGTGTGCATCCT 60.605 57.895 0.00 0.00 45.15 3.24
219 220 0.322456 GGTTGGCTGTGTGCATCCTA 60.322 55.000 0.00 0.00 45.15 2.94
220 221 1.089920 GTTGGCTGTGTGCATCCTAG 58.910 55.000 0.00 0.00 45.15 3.02
221 222 0.692476 TTGGCTGTGTGCATCCTAGT 59.308 50.000 0.00 0.00 45.15 2.57
222 223 0.692476 TGGCTGTGTGCATCCTAGTT 59.308 50.000 0.00 0.00 45.15 2.24
223 224 1.905894 TGGCTGTGTGCATCCTAGTTA 59.094 47.619 0.00 0.00 45.15 2.24
224 225 2.505407 TGGCTGTGTGCATCCTAGTTAT 59.495 45.455 0.00 0.00 45.15 1.89
225 226 2.874701 GGCTGTGTGCATCCTAGTTATG 59.125 50.000 0.00 0.00 45.15 1.90
233 234 3.051081 CATCCTAGTTATGCAGAGGCC 57.949 52.381 0.00 0.00 40.13 5.19
234 235 1.040646 TCCTAGTTATGCAGAGGCCG 58.959 55.000 0.00 0.00 40.13 6.13
235 236 0.034059 CCTAGTTATGCAGAGGCCGG 59.966 60.000 0.00 0.00 40.13 6.13
236 237 0.034059 CTAGTTATGCAGAGGCCGGG 59.966 60.000 2.18 0.00 40.13 5.73
237 238 0.689745 TAGTTATGCAGAGGCCGGGT 60.690 55.000 2.18 0.00 40.13 5.28
238 239 1.819632 GTTATGCAGAGGCCGGGTG 60.820 63.158 2.18 0.00 40.13 4.61
239 240 2.297895 TTATGCAGAGGCCGGGTGT 61.298 57.895 2.18 0.00 40.13 4.16
240 241 0.978667 TTATGCAGAGGCCGGGTGTA 60.979 55.000 2.18 0.00 40.13 2.90
241 242 0.762842 TATGCAGAGGCCGGGTGTAT 60.763 55.000 2.18 3.94 40.13 2.29
242 243 2.203070 GCAGAGGCCGGGTGTATG 60.203 66.667 2.18 0.00 0.00 2.39
243 244 3.031417 GCAGAGGCCGGGTGTATGT 62.031 63.158 2.18 0.00 0.00 2.29
244 245 1.602237 CAGAGGCCGGGTGTATGTT 59.398 57.895 2.18 0.00 0.00 2.71
245 246 0.462047 CAGAGGCCGGGTGTATGTTC 60.462 60.000 2.18 0.00 0.00 3.18
246 247 0.907704 AGAGGCCGGGTGTATGTTCA 60.908 55.000 2.18 0.00 0.00 3.18
247 248 0.180406 GAGGCCGGGTGTATGTTCAT 59.820 55.000 2.18 0.00 0.00 2.57
248 249 0.623723 AGGCCGGGTGTATGTTCATT 59.376 50.000 2.18 0.00 0.00 2.57
249 250 1.841277 AGGCCGGGTGTATGTTCATTA 59.159 47.619 2.18 0.00 0.00 1.90
250 251 2.441750 AGGCCGGGTGTATGTTCATTAT 59.558 45.455 2.18 0.00 0.00 1.28
251 252 3.649023 AGGCCGGGTGTATGTTCATTATA 59.351 43.478 2.18 0.00 0.00 0.98
252 253 4.288626 AGGCCGGGTGTATGTTCATTATAT 59.711 41.667 2.18 0.00 0.00 0.86
253 254 5.007682 GGCCGGGTGTATGTTCATTATATT 58.992 41.667 2.18 0.00 0.00 1.28
254 255 5.106317 GGCCGGGTGTATGTTCATTATATTG 60.106 44.000 2.18 0.00 0.00 1.90
255 256 5.472137 GCCGGGTGTATGTTCATTATATTGT 59.528 40.000 2.18 0.00 0.00 2.71
256 257 6.651643 GCCGGGTGTATGTTCATTATATTGTA 59.348 38.462 2.18 0.00 0.00 2.41
257 258 7.335924 GCCGGGTGTATGTTCATTATATTGTAT 59.664 37.037 2.18 0.00 0.00 2.29
258 259 8.879759 CCGGGTGTATGTTCATTATATTGTATC 58.120 37.037 0.00 0.00 0.00 2.24
259 260 8.879759 CGGGTGTATGTTCATTATATTGTATCC 58.120 37.037 0.00 0.00 0.00 2.59
260 261 9.959721 GGGTGTATGTTCATTATATTGTATCCT 57.040 33.333 0.00 0.00 0.00 3.24
275 276 7.951347 ATTGTATCCTCTTGATGCTTCTTTT 57.049 32.000 0.88 0.00 37.04 2.27
276 277 6.748333 TGTATCCTCTTGATGCTTCTTTTG 57.252 37.500 0.88 0.00 37.04 2.44
277 278 6.475504 TGTATCCTCTTGATGCTTCTTTTGA 58.524 36.000 0.88 0.00 37.04 2.69
278 279 6.596888 TGTATCCTCTTGATGCTTCTTTTGAG 59.403 38.462 0.88 3.77 37.04 3.02
279 280 3.755378 TCCTCTTGATGCTTCTTTTGAGC 59.245 43.478 0.88 0.00 0.00 4.26
280 281 3.119566 CCTCTTGATGCTTCTTTTGAGCC 60.120 47.826 0.88 0.00 0.00 4.70
281 282 3.489355 TCTTGATGCTTCTTTTGAGCCA 58.511 40.909 0.88 0.00 0.00 4.75
282 283 3.890756 TCTTGATGCTTCTTTTGAGCCAA 59.109 39.130 0.88 0.00 0.00 4.52
283 284 4.525487 TCTTGATGCTTCTTTTGAGCCAAT 59.475 37.500 0.88 0.00 0.00 3.16
284 285 5.711506 TCTTGATGCTTCTTTTGAGCCAATA 59.288 36.000 0.88 0.00 0.00 1.90
285 286 5.981088 TGATGCTTCTTTTGAGCCAATAA 57.019 34.783 0.88 0.00 0.00 1.40
286 287 6.343716 TGATGCTTCTTTTGAGCCAATAAA 57.656 33.333 0.88 0.00 0.00 1.40
287 288 6.757237 TGATGCTTCTTTTGAGCCAATAAAA 58.243 32.000 0.88 0.00 0.00 1.52
288 289 7.388437 TGATGCTTCTTTTGAGCCAATAAAAT 58.612 30.769 0.88 0.00 0.00 1.82
289 290 7.879160 TGATGCTTCTTTTGAGCCAATAAAATT 59.121 29.630 0.88 0.00 0.00 1.82
290 291 7.656707 TGCTTCTTTTGAGCCAATAAAATTC 57.343 32.000 0.00 0.00 0.00 2.17
291 292 7.215789 TGCTTCTTTTGAGCCAATAAAATTCA 58.784 30.769 0.00 0.00 0.00 2.57
292 293 7.171337 TGCTTCTTTTGAGCCAATAAAATTCAC 59.829 33.333 0.00 0.00 0.00 3.18
293 294 7.360353 GCTTCTTTTGAGCCAATAAAATTCACC 60.360 37.037 0.00 0.00 0.00 4.02
294 295 6.463360 TCTTTTGAGCCAATAAAATTCACCC 58.537 36.000 0.00 0.00 0.00 4.61
295 296 6.269769 TCTTTTGAGCCAATAAAATTCACCCT 59.730 34.615 0.00 0.00 0.00 4.34
296 297 6.432403 TTTGAGCCAATAAAATTCACCCTT 57.568 33.333 0.00 0.00 0.00 3.95
297 298 6.432403 TTGAGCCAATAAAATTCACCCTTT 57.568 33.333 0.00 0.00 0.00 3.11
298 299 5.792741 TGAGCCAATAAAATTCACCCTTTG 58.207 37.500 0.00 0.00 0.00 2.77
299 300 5.306678 TGAGCCAATAAAATTCACCCTTTGT 59.693 36.000 0.00 0.00 0.00 2.83
300 301 5.793817 AGCCAATAAAATTCACCCTTTGTC 58.206 37.500 0.00 0.00 0.00 3.18
301 302 4.625311 GCCAATAAAATTCACCCTTTGTCG 59.375 41.667 0.00 0.00 0.00 4.35
302 303 5.565834 GCCAATAAAATTCACCCTTTGTCGA 60.566 40.000 0.00 0.00 0.00 4.20
303 304 6.451393 CCAATAAAATTCACCCTTTGTCGAA 58.549 36.000 0.00 0.00 0.00 3.71
304 305 6.926272 CCAATAAAATTCACCCTTTGTCGAAA 59.074 34.615 0.00 0.00 0.00 3.46
305 306 7.439655 CCAATAAAATTCACCCTTTGTCGAAAA 59.560 33.333 0.00 0.00 0.00 2.29
306 307 8.821894 CAATAAAATTCACCCTTTGTCGAAAAA 58.178 29.630 0.00 0.00 0.00 1.94
327 328 1.128188 ACCTCACCACTCCAAGTCCC 61.128 60.000 0.00 0.00 0.00 4.46
354 357 4.045207 AGTCCTCTATCCATATGCTCCTCA 59.955 45.833 0.00 0.00 0.00 3.86
355 358 4.402155 GTCCTCTATCCATATGCTCCTCAG 59.598 50.000 0.00 0.00 0.00 3.35
387 390 4.037923 TGAATCTTGCAAGTTCAAGGGTTC 59.962 41.667 27.43 16.02 42.68 3.62
404 407 3.059120 GGGTTCTGTTTCGCACTACTTTC 60.059 47.826 0.00 0.00 0.00 2.62
409 412 5.543714 TCTGTTTCGCACTACTTTCCATAA 58.456 37.500 0.00 0.00 0.00 1.90
748 762 1.888512 TCTGGCTTTGATTGTGCTTCC 59.111 47.619 0.00 0.00 0.00 3.46
791 805 2.299867 CCTTGCTTTAATTGTGCCCTGT 59.700 45.455 0.00 0.00 0.00 4.00
840 854 1.525535 GCCATAGGACCAGCTGCAG 60.526 63.158 10.11 10.11 0.00 4.41
972 986 1.963338 GAGCTGTTTCTGCGGCAGT 60.963 57.895 27.63 8.29 42.87 4.40
1014 1028 4.819761 GCGATGCCTCCTCACGCA 62.820 66.667 0.00 0.00 46.75 5.24
1015 1029 2.125552 CGATGCCTCCTCACGCAA 60.126 61.111 0.00 0.00 38.75 4.85
1071 1085 3.333219 CAGGAGGCAGGAGGGCAA 61.333 66.667 0.00 0.00 46.44 4.52
1462 1476 4.848757 CTTGGAAAGTAAGTCTGTTGCAC 58.151 43.478 0.00 0.00 39.70 4.57
1469 1483 2.717639 AAGTCTGTTGCACCTGAAGT 57.282 45.000 0.00 0.00 0.00 3.01
1499 1513 4.145052 ACCCTCTGTTTTTCATTCCAGAC 58.855 43.478 0.00 0.00 31.11 3.51
1529 1543 5.215160 CACACAACTATCAAAGTGGAAAGC 58.785 41.667 0.00 0.00 38.88 3.51
1539 1553 3.447040 TGGAAAGCCAGCACAAGC 58.553 55.556 0.00 0.00 39.92 4.01
1540 1554 2.202395 TGGAAAGCCAGCACAAGCC 61.202 57.895 0.00 0.00 43.56 4.35
1543 1557 1.747325 GAAAGCCAGCACAAGCCCAA 61.747 55.000 0.00 0.00 43.56 4.12
1544 1558 1.751349 AAAGCCAGCACAAGCCCAAG 61.751 55.000 0.00 0.00 43.56 3.61
1545 1559 2.914097 GCCAGCACAAGCCCAAGT 60.914 61.111 0.00 0.00 43.56 3.16
1547 1561 1.589716 GCCAGCACAAGCCCAAGTAG 61.590 60.000 0.00 0.00 43.56 2.57
1549 1563 1.160137 CAGCACAAGCCCAAGTAGTC 58.840 55.000 0.00 0.00 43.56 2.59
1556 1572 4.393062 CACAAGCCCAAGTAGTCAGTATTG 59.607 45.833 0.00 0.00 0.00 1.90
1586 1602 1.321474 CCATATGCCGGCATGAACTT 58.679 50.000 44.59 25.99 37.82 2.66
1587 1603 1.001048 CCATATGCCGGCATGAACTTG 60.001 52.381 44.59 31.08 37.82 3.16
1591 1607 1.212751 GCCGGCATGAACTTGGTTC 59.787 57.895 24.80 3.75 42.26 3.62
1618 1634 1.218230 GCCGGCGAGATGAATCAGAC 61.218 60.000 12.58 0.00 0.00 3.51
1633 1649 5.474532 TGAATCAGACCATTTGTTTCCTCAG 59.525 40.000 0.00 0.00 0.00 3.35
1647 1663 2.418669 TCCTCAGAAAACCCCTGAACT 58.581 47.619 0.00 0.00 39.83 3.01
1654 1670 6.369629 TCAGAAAACCCCTGAACTTATTCAA 58.630 36.000 0.00 0.00 44.28 2.69
1674 1690 1.691337 AAGCAATGCATGGGCCCAT 60.691 52.632 32.75 32.75 40.13 4.00
1681 1697 4.438255 CATGGGCCCATGTGTCAA 57.562 55.556 44.55 16.57 46.20 3.18
1682 1698 2.904835 CATGGGCCCATGTGTCAAT 58.095 52.632 44.55 19.95 46.20 2.57
1683 1699 0.462375 CATGGGCCCATGTGTCAATG 59.538 55.000 44.55 26.57 46.20 2.82
1684 1700 0.688418 ATGGGCCCATGTGTCAATGG 60.688 55.000 37.06 6.93 45.82 3.16
1685 1701 1.305213 GGGCCCATGTGTCAATGGT 60.305 57.895 19.95 0.00 44.93 3.55
1686 1702 1.322538 GGGCCCATGTGTCAATGGTC 61.323 60.000 19.95 1.76 44.93 4.02
1687 1703 0.323725 GGCCCATGTGTCAATGGTCT 60.324 55.000 0.00 0.00 44.93 3.85
1688 1704 0.813184 GCCCATGTGTCAATGGTCTG 59.187 55.000 11.00 1.49 44.93 3.51
1689 1705 1.887956 GCCCATGTGTCAATGGTCTGT 60.888 52.381 11.00 0.00 44.93 3.41
1690 1706 2.517959 CCCATGTGTCAATGGTCTGTT 58.482 47.619 11.00 0.00 44.93 3.16
1691 1707 2.892852 CCCATGTGTCAATGGTCTGTTT 59.107 45.455 11.00 0.00 44.93 2.83
1692 1708 3.321682 CCCATGTGTCAATGGTCTGTTTT 59.678 43.478 11.00 0.00 44.93 2.43
1693 1709 4.549458 CCATGTGTCAATGGTCTGTTTTC 58.451 43.478 0.00 0.00 41.98 2.29
1694 1710 4.549458 CATGTGTCAATGGTCTGTTTTCC 58.451 43.478 0.00 0.00 0.00 3.13
1695 1711 2.955660 TGTGTCAATGGTCTGTTTTCCC 59.044 45.455 0.00 0.00 0.00 3.97
1696 1712 3.222603 GTGTCAATGGTCTGTTTTCCCT 58.777 45.455 0.00 0.00 0.00 4.20
1697 1713 3.636764 GTGTCAATGGTCTGTTTTCCCTT 59.363 43.478 0.00 0.00 0.00 3.95
1698 1714 4.099419 GTGTCAATGGTCTGTTTTCCCTTT 59.901 41.667 0.00 0.00 0.00 3.11
1699 1715 4.340950 TGTCAATGGTCTGTTTTCCCTTTC 59.659 41.667 0.00 0.00 0.00 2.62
1700 1716 4.584743 GTCAATGGTCTGTTTTCCCTTTCT 59.415 41.667 0.00 0.00 0.00 2.52
1701 1717 4.827284 TCAATGGTCTGTTTTCCCTTTCTC 59.173 41.667 0.00 0.00 0.00 2.87
1702 1718 4.731313 ATGGTCTGTTTTCCCTTTCTCT 57.269 40.909 0.00 0.00 0.00 3.10
1703 1719 4.519906 TGGTCTGTTTTCCCTTTCTCTT 57.480 40.909 0.00 0.00 0.00 2.85
1704 1720 5.640158 TGGTCTGTTTTCCCTTTCTCTTA 57.360 39.130 0.00 0.00 0.00 2.10
1705 1721 5.374071 TGGTCTGTTTTCCCTTTCTCTTAC 58.626 41.667 0.00 0.00 0.00 2.34
1706 1722 5.132144 TGGTCTGTTTTCCCTTTCTCTTACT 59.868 40.000 0.00 0.00 0.00 2.24
1707 1723 5.701750 GGTCTGTTTTCCCTTTCTCTTACTC 59.298 44.000 0.00 0.00 0.00 2.59
1708 1724 5.405873 GTCTGTTTTCCCTTTCTCTTACTCG 59.594 44.000 0.00 0.00 0.00 4.18
1709 1725 5.070047 TCTGTTTTCCCTTTCTCTTACTCGT 59.930 40.000 0.00 0.00 0.00 4.18
1710 1726 5.677567 TGTTTTCCCTTTCTCTTACTCGTT 58.322 37.500 0.00 0.00 0.00 3.85
1711 1727 6.819284 TGTTTTCCCTTTCTCTTACTCGTTA 58.181 36.000 0.00 0.00 0.00 3.18
1712 1728 6.927381 TGTTTTCCCTTTCTCTTACTCGTTAG 59.073 38.462 0.00 0.00 0.00 2.34
1713 1729 4.715527 TCCCTTTCTCTTACTCGTTAGC 57.284 45.455 0.00 0.00 0.00 3.09
1714 1730 3.446516 TCCCTTTCTCTTACTCGTTAGCC 59.553 47.826 0.00 0.00 0.00 3.93
1715 1731 3.430513 CCCTTTCTCTTACTCGTTAGCCC 60.431 52.174 0.00 0.00 0.00 5.19
1716 1732 3.430513 CCTTTCTCTTACTCGTTAGCCCC 60.431 52.174 0.00 0.00 0.00 5.80
1717 1733 2.519771 TCTCTTACTCGTTAGCCCCA 57.480 50.000 0.00 0.00 0.00 4.96
1722 1738 1.180029 TACTCGTTAGCCCCACTGAC 58.820 55.000 0.00 0.00 0.00 3.51
1726 1742 0.892755 CGTTAGCCCCACTGACAGTA 59.107 55.000 8.02 0.00 34.60 2.74
1758 1794 4.885907 ACCATTGATCCTTTAGTGAGCATG 59.114 41.667 0.00 0.00 0.00 4.06
2037 2073 2.655364 CCGACCATGTAGCGAGCG 60.655 66.667 0.00 0.00 0.00 5.03
2038 2074 2.655364 CGACCATGTAGCGAGCGG 60.655 66.667 0.00 0.00 0.00 5.52
2040 2076 4.530857 ACCATGTAGCGAGCGGGC 62.531 66.667 0.00 0.00 0.00 6.13
2041 2077 4.529219 CCATGTAGCGAGCGGGCA 62.529 66.667 4.87 0.00 34.64 5.36
2045 2083 4.436998 GTAGCGAGCGGGCACACT 62.437 66.667 4.87 0.00 34.64 3.55
2116 2159 3.123620 GGCACGCAGAGCTTCAGG 61.124 66.667 0.00 0.00 45.31 3.86
2191 2234 0.461548 GTCATGATCCACTCGGCTCA 59.538 55.000 0.00 0.00 41.55 4.26
2871 2921 2.081526 CGTCGGCACATTCTTCTGG 58.918 57.895 0.00 0.00 0.00 3.86
2872 2922 0.389817 CGTCGGCACATTCTTCTGGA 60.390 55.000 0.00 0.00 0.00 3.86
2873 2923 1.079503 GTCGGCACATTCTTCTGGAC 58.920 55.000 0.00 0.00 0.00 4.02
2874 2924 0.036388 TCGGCACATTCTTCTGGACC 60.036 55.000 0.00 0.00 0.00 4.46
2875 2925 0.321564 CGGCACATTCTTCTGGACCA 60.322 55.000 0.00 0.00 0.00 4.02
2876 2926 1.881925 CGGCACATTCTTCTGGACCAA 60.882 52.381 0.00 0.00 0.00 3.67
2877 2927 2.238521 GGCACATTCTTCTGGACCAAA 58.761 47.619 0.00 0.00 0.00 3.28
2878 2928 2.627699 GGCACATTCTTCTGGACCAAAA 59.372 45.455 0.00 0.00 0.00 2.44
2879 2929 3.259123 GGCACATTCTTCTGGACCAAAAT 59.741 43.478 0.00 0.00 0.00 1.82
2880 2930 4.488879 GCACATTCTTCTGGACCAAAATC 58.511 43.478 0.00 0.00 0.00 2.17
2881 2931 4.726416 CACATTCTTCTGGACCAAAATCG 58.274 43.478 0.00 0.00 0.00 3.34
2882 2932 4.455533 CACATTCTTCTGGACCAAAATCGA 59.544 41.667 0.00 0.00 0.00 3.59
2883 2933 4.455877 ACATTCTTCTGGACCAAAATCGAC 59.544 41.667 0.00 0.00 0.00 4.20
2884 2934 2.683968 TCTTCTGGACCAAAATCGACG 58.316 47.619 0.00 0.00 0.00 5.12
2885 2935 2.297880 TCTTCTGGACCAAAATCGACGA 59.702 45.455 0.00 0.00 0.00 4.20
2886 2936 2.823924 TCTGGACCAAAATCGACGAA 57.176 45.000 0.00 0.00 0.00 3.85
2887 2937 3.328382 TCTGGACCAAAATCGACGAAT 57.672 42.857 0.00 0.00 0.00 3.34
2888 2938 4.459390 TCTGGACCAAAATCGACGAATA 57.541 40.909 0.00 0.00 0.00 1.75
2889 2939 4.178540 TCTGGACCAAAATCGACGAATAC 58.821 43.478 0.00 0.00 0.00 1.89
2890 2940 4.081862 TCTGGACCAAAATCGACGAATACT 60.082 41.667 0.00 0.00 0.00 2.12
2891 2941 4.178540 TGGACCAAAATCGACGAATACTC 58.821 43.478 0.00 0.00 0.00 2.59
2892 2942 4.178540 GGACCAAAATCGACGAATACTCA 58.821 43.478 0.00 0.00 0.00 3.41
2893 2943 4.628333 GGACCAAAATCGACGAATACTCAA 59.372 41.667 0.00 0.00 0.00 3.02
2894 2944 5.121142 GGACCAAAATCGACGAATACTCAAA 59.879 40.000 0.00 0.00 0.00 2.69
2895 2945 6.183360 GGACCAAAATCGACGAATACTCAAAT 60.183 38.462 0.00 0.00 0.00 2.32
2896 2946 6.772078 ACCAAAATCGACGAATACTCAAATC 58.228 36.000 0.00 0.00 0.00 2.17
2897 2947 6.594159 ACCAAAATCGACGAATACTCAAATCT 59.406 34.615 0.00 0.00 0.00 2.40
2898 2948 7.762615 ACCAAAATCGACGAATACTCAAATCTA 59.237 33.333 0.00 0.00 0.00 1.98
2899 2949 8.056571 CCAAAATCGACGAATACTCAAATCTAC 58.943 37.037 0.00 0.00 0.00 2.59
2900 2950 8.808529 CAAAATCGACGAATACTCAAATCTACT 58.191 33.333 0.00 0.00 0.00 2.57
2901 2951 8.928270 AAATCGACGAATACTCAAATCTACTT 57.072 30.769 0.00 0.00 0.00 2.24
2905 2955 9.661187 TCGACGAATACTCAAATCTACTTAATC 57.339 33.333 0.00 0.00 0.00 1.75
2906 2956 8.619796 CGACGAATACTCAAATCTACTTAATCG 58.380 37.037 0.00 0.00 0.00 3.34
2907 2957 9.448294 GACGAATACTCAAATCTACTTAATCGT 57.552 33.333 0.00 0.00 39.61 3.73
2908 2958 9.448294 ACGAATACTCAAATCTACTTAATCGTC 57.552 33.333 0.00 0.00 32.55 4.20
2909 2959 9.447040 CGAATACTCAAATCTACTTAATCGTCA 57.553 33.333 0.00 0.00 0.00 4.35
2913 2963 8.690680 ACTCAAATCTACTTAATCGTCAGAAC 57.309 34.615 0.00 0.00 0.00 3.01
2914 2964 8.304596 ACTCAAATCTACTTAATCGTCAGAACA 58.695 33.333 0.00 0.00 0.00 3.18
2915 2965 8.462143 TCAAATCTACTTAATCGTCAGAACAC 57.538 34.615 0.00 0.00 0.00 3.32
2916 2966 7.272731 TCAAATCTACTTAATCGTCAGAACACG 59.727 37.037 0.00 0.00 41.36 4.49
2923 2973 0.040336 TCGTCAGAACACGAGACAGC 60.040 55.000 0.00 0.00 43.79 4.40
2924 2974 0.039978 CGTCAGAACACGAGACAGCT 60.040 55.000 0.00 0.00 42.69 4.24
2925 2975 1.197036 CGTCAGAACACGAGACAGCTA 59.803 52.381 0.00 0.00 42.69 3.32
2926 2976 2.350484 CGTCAGAACACGAGACAGCTAA 60.350 50.000 0.00 0.00 42.69 3.09
2927 2977 2.981140 GTCAGAACACGAGACAGCTAAC 59.019 50.000 0.00 0.00 32.68 2.34
2928 2978 1.979469 CAGAACACGAGACAGCTAACG 59.021 52.381 0.00 0.00 0.00 3.18
2929 2979 1.878088 AGAACACGAGACAGCTAACGA 59.122 47.619 0.00 0.00 0.00 3.85
2930 2980 2.292569 AGAACACGAGACAGCTAACGAA 59.707 45.455 0.00 0.00 0.00 3.85
2931 2981 2.787601 ACACGAGACAGCTAACGAAA 57.212 45.000 0.00 0.00 0.00 3.46
2932 2982 2.662700 ACACGAGACAGCTAACGAAAG 58.337 47.619 0.00 0.00 0.00 2.62
2933 2983 2.292569 ACACGAGACAGCTAACGAAAGA 59.707 45.455 0.00 0.00 0.00 2.52
2934 2984 3.057456 ACACGAGACAGCTAACGAAAGAT 60.057 43.478 0.00 0.00 0.00 2.40
2935 2985 3.921021 CACGAGACAGCTAACGAAAGATT 59.079 43.478 0.00 0.00 0.00 2.40
2936 2986 5.093457 CACGAGACAGCTAACGAAAGATTA 58.907 41.667 0.00 0.00 0.00 1.75
2937 2987 5.571741 CACGAGACAGCTAACGAAAGATTAA 59.428 40.000 0.00 0.00 0.00 1.40
2938 2988 6.089016 CACGAGACAGCTAACGAAAGATTAAA 59.911 38.462 0.00 0.00 0.00 1.52
2939 2989 6.643770 ACGAGACAGCTAACGAAAGATTAAAA 59.356 34.615 0.00 0.00 0.00 1.52
2940 2990 7.148787 ACGAGACAGCTAACGAAAGATTAAAAG 60.149 37.037 0.00 0.00 0.00 2.27
2941 2991 7.061905 CGAGACAGCTAACGAAAGATTAAAAGA 59.938 37.037 0.00 0.00 0.00 2.52
2942 2992 8.603242 AGACAGCTAACGAAAGATTAAAAGAA 57.397 30.769 0.00 0.00 0.00 2.52
2943 2993 8.496751 AGACAGCTAACGAAAGATTAAAAGAAC 58.503 33.333 0.00 0.00 0.00 3.01
2944 2994 8.149973 ACAGCTAACGAAAGATTAAAAGAACA 57.850 30.769 0.00 0.00 0.00 3.18
2945 2995 8.784043 ACAGCTAACGAAAGATTAAAAGAACAT 58.216 29.630 0.00 0.00 0.00 2.71
2946 2996 9.267096 CAGCTAACGAAAGATTAAAAGAACATC 57.733 33.333 0.00 0.00 0.00 3.06
2947 2997 9.220767 AGCTAACGAAAGATTAAAAGAACATCT 57.779 29.630 0.00 0.00 0.00 2.90
2948 2998 9.267096 GCTAACGAAAGATTAAAAGAACATCTG 57.733 33.333 0.00 0.00 0.00 2.90
2961 3011 7.536895 AAAGAACATCTGAAATCATCTCTCG 57.463 36.000 0.00 0.00 0.00 4.04
2962 3012 5.049167 AGAACATCTGAAATCATCTCTCGC 58.951 41.667 0.00 0.00 0.00 5.03
2963 3013 4.397481 ACATCTGAAATCATCTCTCGCA 57.603 40.909 0.00 0.00 0.00 5.10
2964 3014 4.958509 ACATCTGAAATCATCTCTCGCAT 58.041 39.130 0.00 0.00 0.00 4.73
2965 3015 5.366460 ACATCTGAAATCATCTCTCGCATT 58.634 37.500 0.00 0.00 0.00 3.56
2966 3016 5.821470 ACATCTGAAATCATCTCTCGCATTT 59.179 36.000 0.00 0.00 0.00 2.32
2967 3017 6.318144 ACATCTGAAATCATCTCTCGCATTTT 59.682 34.615 0.00 0.00 0.00 1.82
2968 3018 6.115450 TCTGAAATCATCTCTCGCATTTTG 57.885 37.500 0.00 0.00 0.00 2.44
2969 3019 5.645067 TCTGAAATCATCTCTCGCATTTTGT 59.355 36.000 0.00 0.00 0.00 2.83
2970 3020 6.149973 TCTGAAATCATCTCTCGCATTTTGTT 59.850 34.615 0.00 0.00 0.00 2.83
2971 3021 6.088173 TGAAATCATCTCTCGCATTTTGTTG 58.912 36.000 0.00 0.00 0.00 3.33
2972 3022 5.885230 AATCATCTCTCGCATTTTGTTGA 57.115 34.783 0.00 0.00 0.00 3.18
2973 3023 4.668576 TCATCTCTCGCATTTTGTTGAC 57.331 40.909 0.00 0.00 0.00 3.18
2974 3024 4.064388 TCATCTCTCGCATTTTGTTGACA 58.936 39.130 0.00 0.00 0.00 3.58
2975 3025 4.514816 TCATCTCTCGCATTTTGTTGACAA 59.485 37.500 0.00 0.00 0.00 3.18
2976 3026 4.891627 TCTCTCGCATTTTGTTGACAAA 57.108 36.364 5.25 5.25 43.36 2.83
2977 3027 5.437289 TCTCTCGCATTTTGTTGACAAAT 57.563 34.783 9.84 0.00 44.30 2.32
2978 3028 5.451908 TCTCTCGCATTTTGTTGACAAATC 58.548 37.500 9.84 3.06 44.30 2.17
2979 3029 5.239306 TCTCTCGCATTTTGTTGACAAATCT 59.761 36.000 9.84 0.00 44.30 2.40
2980 3030 5.451908 TCTCGCATTTTGTTGACAAATCTC 58.548 37.500 9.84 2.48 44.30 2.75
2981 3031 5.008514 TCTCGCATTTTGTTGACAAATCTCA 59.991 36.000 9.84 0.00 44.30 3.27
2982 3032 5.214417 TCGCATTTTGTTGACAAATCTCAG 58.786 37.500 9.84 2.85 44.30 3.35
2983 3033 4.143473 CGCATTTTGTTGACAAATCTCAGC 60.143 41.667 9.84 8.79 44.30 4.26
2984 3034 4.746115 GCATTTTGTTGACAAATCTCAGCA 59.254 37.500 9.84 0.00 44.30 4.41
2985 3035 5.107607 GCATTTTGTTGACAAATCTCAGCAG 60.108 40.000 9.84 0.00 44.30 4.24
2986 3036 3.631145 TTGTTGACAAATCTCAGCAGC 57.369 42.857 0.00 0.00 33.50 5.25
2987 3037 2.574450 TGTTGACAAATCTCAGCAGCA 58.426 42.857 0.00 0.00 29.06 4.41
2988 3038 2.950975 TGTTGACAAATCTCAGCAGCAA 59.049 40.909 0.00 0.00 29.06 3.91
2989 3039 3.243168 TGTTGACAAATCTCAGCAGCAAC 60.243 43.478 0.00 0.00 36.02 4.17
2990 3040 2.574450 TGACAAATCTCAGCAGCAACA 58.426 42.857 0.00 0.00 0.00 3.33
2991 3041 2.291465 TGACAAATCTCAGCAGCAACAC 59.709 45.455 0.00 0.00 0.00 3.32
2992 3042 2.291465 GACAAATCTCAGCAGCAACACA 59.709 45.455 0.00 0.00 0.00 3.72
2993 3043 2.889045 ACAAATCTCAGCAGCAACACAT 59.111 40.909 0.00 0.00 0.00 3.21
2994 3044 3.319972 ACAAATCTCAGCAGCAACACATT 59.680 39.130 0.00 0.00 0.00 2.71
2995 3045 4.520111 ACAAATCTCAGCAGCAACACATTA 59.480 37.500 0.00 0.00 0.00 1.90
2996 3046 5.009911 ACAAATCTCAGCAGCAACACATTAA 59.990 36.000 0.00 0.00 0.00 1.40
2997 3047 4.959596 ATCTCAGCAGCAACACATTAAG 57.040 40.909 0.00 0.00 0.00 1.85
2998 3048 3.076621 TCTCAGCAGCAACACATTAAGG 58.923 45.455 0.00 0.00 0.00 2.69
2999 3049 2.816087 CTCAGCAGCAACACATTAAGGT 59.184 45.455 0.00 0.00 0.00 3.50
3000 3050 3.221771 TCAGCAGCAACACATTAAGGTT 58.778 40.909 0.00 0.00 0.00 3.50
3001 3051 3.253188 TCAGCAGCAACACATTAAGGTTC 59.747 43.478 0.00 0.00 0.00 3.62
3002 3052 3.004629 CAGCAGCAACACATTAAGGTTCA 59.995 43.478 0.00 0.00 0.00 3.18
3003 3053 3.254166 AGCAGCAACACATTAAGGTTCAG 59.746 43.478 0.00 0.00 0.00 3.02
3004 3054 3.612479 GCAGCAACACATTAAGGTTCAGG 60.612 47.826 0.00 0.00 0.00 3.86
3005 3055 3.820467 CAGCAACACATTAAGGTTCAGGA 59.180 43.478 0.00 0.00 0.00 3.86
3006 3056 4.074970 AGCAACACATTAAGGTTCAGGAG 58.925 43.478 0.00 0.00 0.00 3.69
3007 3057 3.821033 GCAACACATTAAGGTTCAGGAGT 59.179 43.478 0.00 0.00 0.00 3.85
3008 3058 4.278419 GCAACACATTAAGGTTCAGGAGTT 59.722 41.667 0.00 0.00 0.00 3.01
3009 3059 5.562890 GCAACACATTAAGGTTCAGGAGTTC 60.563 44.000 0.00 0.00 0.00 3.01
3010 3060 4.315803 ACACATTAAGGTTCAGGAGTTCG 58.684 43.478 0.00 0.00 0.00 3.95
3011 3061 3.684788 CACATTAAGGTTCAGGAGTTCGG 59.315 47.826 0.00 0.00 0.00 4.30
3012 3062 3.581332 ACATTAAGGTTCAGGAGTTCGGA 59.419 43.478 0.00 0.00 0.00 4.55
3013 3063 4.041198 ACATTAAGGTTCAGGAGTTCGGAA 59.959 41.667 0.00 0.00 0.00 4.30
3014 3064 4.903045 TTAAGGTTCAGGAGTTCGGAAT 57.097 40.909 0.00 0.00 32.56 3.01
3015 3065 2.770164 AGGTTCAGGAGTTCGGAATG 57.230 50.000 0.00 0.00 32.56 2.67
3016 3066 1.087501 GGTTCAGGAGTTCGGAATGC 58.912 55.000 0.00 0.00 32.56 3.56
3017 3067 1.087501 GTTCAGGAGTTCGGAATGCC 58.912 55.000 0.00 0.00 32.56 4.40
3018 3068 0.690192 TTCAGGAGTTCGGAATGCCA 59.310 50.000 12.43 0.00 0.00 4.92
3019 3069 0.250234 TCAGGAGTTCGGAATGCCAG 59.750 55.000 12.43 6.34 0.00 4.85
3020 3070 0.250234 CAGGAGTTCGGAATGCCAGA 59.750 55.000 12.43 0.00 0.00 3.86
3021 3071 0.250513 AGGAGTTCGGAATGCCAGAC 59.749 55.000 12.43 0.00 0.00 3.51
3022 3072 0.250513 GGAGTTCGGAATGCCAGACT 59.749 55.000 0.00 0.00 33.20 3.24
3023 3073 1.363744 GAGTTCGGAATGCCAGACTG 58.636 55.000 0.00 0.00 31.36 3.51
3024 3074 0.036010 AGTTCGGAATGCCAGACTGG 60.036 55.000 17.83 17.83 41.55 4.00
3025 3075 1.026718 GTTCGGAATGCCAGACTGGG 61.027 60.000 23.09 5.26 38.19 4.45
3026 3076 1.198094 TTCGGAATGCCAGACTGGGA 61.198 55.000 23.09 21.14 43.78 4.37
3027 3077 1.450312 CGGAATGCCAGACTGGGAC 60.450 63.158 23.09 9.24 41.95 4.46
3028 3078 1.903877 CGGAATGCCAGACTGGGACT 61.904 60.000 23.09 10.63 41.95 3.85
3029 3079 1.204146 GGAATGCCAGACTGGGACTA 58.796 55.000 23.09 0.00 41.95 2.59
3030 3080 1.134371 GGAATGCCAGACTGGGACTAC 60.134 57.143 23.09 7.36 41.95 2.73
3031 3081 1.555075 GAATGCCAGACTGGGACTACA 59.445 52.381 23.09 12.01 41.95 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.360844 TCAACAACAACGCCTTCAAGA 58.639 42.857 0.00 0.00 0.00 3.02
1 2 2.842208 TCAACAACAACGCCTTCAAG 57.158 45.000 0.00 0.00 0.00 3.02
2 3 2.750166 TCTTCAACAACAACGCCTTCAA 59.250 40.909 0.00 0.00 0.00 2.69
3 4 2.360844 TCTTCAACAACAACGCCTTCA 58.639 42.857 0.00 0.00 0.00 3.02
4 5 3.555518 GATCTTCAACAACAACGCCTTC 58.444 45.455 0.00 0.00 0.00 3.46
5 6 2.293399 GGATCTTCAACAACAACGCCTT 59.707 45.455 0.00 0.00 0.00 4.35
6 7 1.880027 GGATCTTCAACAACAACGCCT 59.120 47.619 0.00 0.00 0.00 5.52
7 8 1.880027 AGGATCTTCAACAACAACGCC 59.120 47.619 0.00 0.00 0.00 5.68
8 9 2.411547 CGAGGATCTTCAACAACAACGC 60.412 50.000 5.61 0.00 0.00 4.84
9 10 2.800544 ACGAGGATCTTCAACAACAACG 59.199 45.455 5.61 0.00 0.00 4.10
10 11 3.120991 CGACGAGGATCTTCAACAACAAC 60.121 47.826 5.61 0.00 32.07 3.32
11 12 3.057019 CGACGAGGATCTTCAACAACAA 58.943 45.455 5.61 0.00 32.07 2.83
12 13 2.035449 ACGACGAGGATCTTCAACAACA 59.965 45.455 0.00 0.00 32.07 3.33
13 14 2.662156 GACGACGAGGATCTTCAACAAC 59.338 50.000 0.00 0.00 32.07 3.32
14 15 2.295070 TGACGACGAGGATCTTCAACAA 59.705 45.455 0.00 0.00 32.07 2.83
15 16 1.883926 TGACGACGAGGATCTTCAACA 59.116 47.619 0.00 0.00 32.07 3.33
16 17 2.631418 TGACGACGAGGATCTTCAAC 57.369 50.000 0.00 0.00 32.07 3.18
17 18 3.056821 ACATTGACGACGAGGATCTTCAA 60.057 43.478 0.00 0.00 40.07 2.69
18 19 2.492088 ACATTGACGACGAGGATCTTCA 59.508 45.455 0.00 0.00 32.07 3.02
19 20 2.854777 CACATTGACGACGAGGATCTTC 59.145 50.000 0.00 0.00 0.00 2.87
20 21 2.417379 CCACATTGACGACGAGGATCTT 60.417 50.000 0.00 0.00 0.00 2.40
21 22 1.135139 CCACATTGACGACGAGGATCT 59.865 52.381 0.00 0.00 0.00 2.75
22 23 1.135083 ACCACATTGACGACGAGGATC 60.135 52.381 0.00 0.00 0.00 3.36
23 24 0.895530 ACCACATTGACGACGAGGAT 59.104 50.000 0.00 0.00 0.00 3.24
24 25 0.038618 CACCACATTGACGACGAGGA 60.039 55.000 0.00 0.00 0.00 3.71
25 26 0.319555 ACACCACATTGACGACGAGG 60.320 55.000 0.00 0.00 0.00 4.63
26 27 1.060713 GACACCACATTGACGACGAG 58.939 55.000 0.00 0.00 0.00 4.18
27 28 0.386113 TGACACCACATTGACGACGA 59.614 50.000 0.00 0.00 0.00 4.20
28 29 1.213491 TTGACACCACATTGACGACG 58.787 50.000 0.00 0.00 0.00 5.12
29 30 2.095768 CCATTGACACCACATTGACGAC 60.096 50.000 0.00 0.00 0.00 4.34
30 31 2.150390 CCATTGACACCACATTGACGA 58.850 47.619 0.00 0.00 0.00 4.20
31 32 1.879380 ACCATTGACACCACATTGACG 59.121 47.619 0.00 0.00 0.00 4.35
32 33 3.552684 CCAACCATTGACACCACATTGAC 60.553 47.826 0.00 0.00 0.00 3.18
33 34 2.627221 CCAACCATTGACACCACATTGA 59.373 45.455 0.00 0.00 0.00 2.57
34 35 2.364970 ACCAACCATTGACACCACATTG 59.635 45.455 0.00 0.00 0.00 2.82
35 36 2.364970 CACCAACCATTGACACCACATT 59.635 45.455 0.00 0.00 0.00 2.71
36 37 1.962807 CACCAACCATTGACACCACAT 59.037 47.619 0.00 0.00 0.00 3.21
37 38 1.397672 CACCAACCATTGACACCACA 58.602 50.000 0.00 0.00 0.00 4.17
38 39 0.031994 GCACCAACCATTGACACCAC 59.968 55.000 0.00 0.00 0.00 4.16
39 40 1.451337 CGCACCAACCATTGACACCA 61.451 55.000 0.00 0.00 0.00 4.17
40 41 1.285641 CGCACCAACCATTGACACC 59.714 57.895 0.00 0.00 0.00 4.16
41 42 1.169661 TCCGCACCAACCATTGACAC 61.170 55.000 0.00 0.00 0.00 3.67
42 43 0.251121 ATCCGCACCAACCATTGACA 60.251 50.000 0.00 0.00 0.00 3.58
43 44 1.745232 TATCCGCACCAACCATTGAC 58.255 50.000 0.00 0.00 0.00 3.18
44 45 2.296792 CATATCCGCACCAACCATTGA 58.703 47.619 0.00 0.00 0.00 2.57
45 46 1.337703 CCATATCCGCACCAACCATTG 59.662 52.381 0.00 0.00 0.00 2.82
46 47 1.064017 ACCATATCCGCACCAACCATT 60.064 47.619 0.00 0.00 0.00 3.16
47 48 0.550914 ACCATATCCGCACCAACCAT 59.449 50.000 0.00 0.00 0.00 3.55
48 49 0.107410 GACCATATCCGCACCAACCA 60.107 55.000 0.00 0.00 0.00 3.67
49 50 1.157870 CGACCATATCCGCACCAACC 61.158 60.000 0.00 0.00 0.00 3.77
50 51 2.307363 CGACCATATCCGCACCAAC 58.693 57.895 0.00 0.00 0.00 3.77
51 52 4.846551 CGACCATATCCGCACCAA 57.153 55.556 0.00 0.00 0.00 3.67
57 58 2.293677 ACTAGAACTGCGACCATATCCG 59.706 50.000 0.00 0.00 0.00 4.18
58 59 4.323553 AACTAGAACTGCGACCATATCC 57.676 45.455 0.00 0.00 0.00 2.59
59 60 5.109903 ACAAACTAGAACTGCGACCATATC 58.890 41.667 0.00 0.00 0.00 1.63
60 61 5.086104 ACAAACTAGAACTGCGACCATAT 57.914 39.130 0.00 0.00 0.00 1.78
61 62 4.491676 GACAAACTAGAACTGCGACCATA 58.508 43.478 0.00 0.00 0.00 2.74
62 63 3.326747 GACAAACTAGAACTGCGACCAT 58.673 45.455 0.00 0.00 0.00 3.55
63 64 2.750948 GACAAACTAGAACTGCGACCA 58.249 47.619 0.00 0.00 0.00 4.02
64 65 1.719780 CGACAAACTAGAACTGCGACC 59.280 52.381 0.00 0.00 0.00 4.79
65 66 2.391879 ACGACAAACTAGAACTGCGAC 58.608 47.619 0.00 0.00 0.00 5.19
66 67 2.787601 ACGACAAACTAGAACTGCGA 57.212 45.000 0.00 0.00 0.00 5.10
67 68 2.792674 TGAACGACAAACTAGAACTGCG 59.207 45.455 0.00 0.00 0.00 5.18
68 69 3.802685 AGTGAACGACAAACTAGAACTGC 59.197 43.478 0.00 0.00 0.00 4.40
69 70 5.041287 TCAGTGAACGACAAACTAGAACTG 58.959 41.667 0.00 0.00 35.07 3.16
70 71 5.258456 TCAGTGAACGACAAACTAGAACT 57.742 39.130 0.00 0.00 0.00 3.01
71 72 5.921408 AGATCAGTGAACGACAAACTAGAAC 59.079 40.000 0.00 0.00 0.00 3.01
72 73 5.920840 CAGATCAGTGAACGACAAACTAGAA 59.079 40.000 0.00 0.00 0.00 2.10
73 74 5.240844 TCAGATCAGTGAACGACAAACTAGA 59.759 40.000 0.00 0.00 0.00 2.43
74 75 5.461526 TCAGATCAGTGAACGACAAACTAG 58.538 41.667 0.00 0.00 0.00 2.57
75 76 5.447624 TCAGATCAGTGAACGACAAACTA 57.552 39.130 0.00 0.00 0.00 2.24
76 77 4.322080 TCAGATCAGTGAACGACAAACT 57.678 40.909 0.00 0.00 0.00 2.66
77 78 4.201532 CGATCAGATCAGTGAACGACAAAC 60.202 45.833 11.12 0.00 43.30 2.93
78 79 3.920412 CGATCAGATCAGTGAACGACAAA 59.080 43.478 11.12 0.00 43.30 2.83
79 80 3.501950 CGATCAGATCAGTGAACGACAA 58.498 45.455 11.12 0.00 43.30 3.18
80 81 2.732282 GCGATCAGATCAGTGAACGACA 60.732 50.000 15.71 0.00 43.30 4.35
81 82 1.849219 GCGATCAGATCAGTGAACGAC 59.151 52.381 15.71 6.22 43.30 4.34
82 83 1.745653 AGCGATCAGATCAGTGAACGA 59.254 47.619 15.71 0.00 43.30 3.85
83 84 2.200792 AGCGATCAGATCAGTGAACG 57.799 50.000 11.12 9.40 43.43 3.95
84 85 3.063180 CCAAAGCGATCAGATCAGTGAAC 59.937 47.826 11.12 0.00 0.00 3.18
85 86 3.264947 CCAAAGCGATCAGATCAGTGAA 58.735 45.455 11.12 0.00 0.00 3.18
86 87 2.419159 CCCAAAGCGATCAGATCAGTGA 60.419 50.000 11.12 0.00 0.00 3.41
87 88 1.938577 CCCAAAGCGATCAGATCAGTG 59.061 52.381 11.12 2.61 0.00 3.66
88 89 1.134280 CCCCAAAGCGATCAGATCAGT 60.134 52.381 11.12 0.00 0.00 3.41
89 90 1.590932 CCCCAAAGCGATCAGATCAG 58.409 55.000 11.12 4.80 0.00 2.90
90 91 0.464373 GCCCCAAAGCGATCAGATCA 60.464 55.000 11.12 0.00 0.00 2.92
91 92 0.179034 AGCCCCAAAGCGATCAGATC 60.179 55.000 0.00 0.00 38.01 2.75
92 93 0.257039 AAGCCCCAAAGCGATCAGAT 59.743 50.000 0.00 0.00 38.01 2.90
93 94 0.038166 AAAGCCCCAAAGCGATCAGA 59.962 50.000 0.00 0.00 38.01 3.27
94 95 0.890683 AAAAGCCCCAAAGCGATCAG 59.109 50.000 0.00 0.00 38.01 2.90
95 96 1.337118 AAAAAGCCCCAAAGCGATCA 58.663 45.000 0.00 0.00 38.01 2.92
122 123 8.303876 GCTATGAATAGGTGTGAAAAGGAAAAA 58.696 33.333 0.00 0.00 0.00 1.94
123 124 7.669722 AGCTATGAATAGGTGTGAAAAGGAAAA 59.330 33.333 1.33 0.00 39.43 2.29
124 125 7.175104 AGCTATGAATAGGTGTGAAAAGGAAA 58.825 34.615 1.33 0.00 39.43 3.13
125 126 6.721318 AGCTATGAATAGGTGTGAAAAGGAA 58.279 36.000 1.33 0.00 39.43 3.36
126 127 6.313519 AGCTATGAATAGGTGTGAAAAGGA 57.686 37.500 1.33 0.00 39.43 3.36
127 128 7.396540 AAAGCTATGAATAGGTGTGAAAAGG 57.603 36.000 2.93 0.00 40.63 3.11
128 129 7.756722 CCAAAAGCTATGAATAGGTGTGAAAAG 59.243 37.037 2.93 0.00 40.63 2.27
129 130 7.232534 ACCAAAAGCTATGAATAGGTGTGAAAA 59.767 33.333 2.93 0.00 40.63 2.29
130 131 6.719370 ACCAAAAGCTATGAATAGGTGTGAAA 59.281 34.615 2.93 0.00 40.63 2.69
131 132 6.245408 ACCAAAAGCTATGAATAGGTGTGAA 58.755 36.000 2.93 0.00 40.63 3.18
132 133 5.815581 ACCAAAAGCTATGAATAGGTGTGA 58.184 37.500 2.93 0.00 40.63 3.58
133 134 5.882557 AGACCAAAAGCTATGAATAGGTGTG 59.117 40.000 2.93 5.08 40.63 3.82
134 135 6.067217 AGACCAAAAGCTATGAATAGGTGT 57.933 37.500 2.93 0.00 40.63 4.16
135 136 8.562892 CATAAGACCAAAAGCTATGAATAGGTG 58.437 37.037 2.93 0.00 40.63 4.00
136 137 8.494433 TCATAAGACCAAAAGCTATGAATAGGT 58.506 33.333 1.14 0.00 42.41 3.08
137 138 8.778358 GTCATAAGACCAAAAGCTATGAATAGG 58.222 37.037 1.14 0.00 38.89 2.57
138 139 9.553064 AGTCATAAGACCAAAAGCTATGAATAG 57.447 33.333 1.14 0.00 46.15 1.73
139 140 9.905713 AAGTCATAAGACCAAAAGCTATGAATA 57.094 29.630 1.14 0.00 46.15 1.75
140 141 8.814038 AAGTCATAAGACCAAAAGCTATGAAT 57.186 30.769 1.14 0.00 46.15 2.57
141 142 8.514594 CAAAGTCATAAGACCAAAAGCTATGAA 58.485 33.333 1.14 0.00 46.15 2.57
142 143 7.362056 GCAAAGTCATAAGACCAAAAGCTATGA 60.362 37.037 1.14 0.00 46.15 2.15
143 144 6.749118 GCAAAGTCATAAGACCAAAAGCTATG 59.251 38.462 0.00 0.00 46.15 2.23
144 145 6.660949 AGCAAAGTCATAAGACCAAAAGCTAT 59.339 34.615 0.00 0.00 46.15 2.97
145 146 6.003950 AGCAAAGTCATAAGACCAAAAGCTA 58.996 36.000 0.00 0.00 46.15 3.32
146 147 4.829492 AGCAAAGTCATAAGACCAAAAGCT 59.171 37.500 0.00 0.00 46.15 3.74
147 148 5.126396 AGCAAAGTCATAAGACCAAAAGC 57.874 39.130 0.00 0.00 46.15 3.51
148 149 7.440523 ACTAGCAAAGTCATAAGACCAAAAG 57.559 36.000 0.00 0.00 46.15 2.27
162 163 2.210116 CACACCAACGACTAGCAAAGT 58.790 47.619 0.00 0.00 42.80 2.66
163 164 2.210116 ACACACCAACGACTAGCAAAG 58.790 47.619 0.00 0.00 0.00 2.77
164 165 2.319136 ACACACCAACGACTAGCAAA 57.681 45.000 0.00 0.00 0.00 3.68
165 166 2.319136 AACACACCAACGACTAGCAA 57.681 45.000 0.00 0.00 0.00 3.91
166 167 2.319136 AAACACACCAACGACTAGCA 57.681 45.000 0.00 0.00 0.00 3.49
167 168 3.363673 GCTAAAACACACCAACGACTAGC 60.364 47.826 0.00 0.00 0.00 3.42
168 169 3.121126 CGCTAAAACACACCAACGACTAG 60.121 47.826 0.00 0.00 0.00 2.57
169 170 2.796031 CGCTAAAACACACCAACGACTA 59.204 45.455 0.00 0.00 0.00 2.59
170 171 1.595794 CGCTAAAACACACCAACGACT 59.404 47.619 0.00 0.00 0.00 4.18
171 172 1.328374 ACGCTAAAACACACCAACGAC 59.672 47.619 0.00 0.00 0.00 4.34
172 173 1.654317 ACGCTAAAACACACCAACGA 58.346 45.000 0.00 0.00 0.00 3.85
173 174 2.461897 AACGCTAAAACACACCAACG 57.538 45.000 0.00 0.00 0.00 4.10
174 175 3.302170 CACAAACGCTAAAACACACCAAC 59.698 43.478 0.00 0.00 0.00 3.77
175 176 3.057456 ACACAAACGCTAAAACACACCAA 60.057 39.130 0.00 0.00 0.00 3.67
176 177 2.488545 ACACAAACGCTAAAACACACCA 59.511 40.909 0.00 0.00 0.00 4.17
177 178 3.139603 ACACAAACGCTAAAACACACC 57.860 42.857 0.00 0.00 0.00 4.16
178 179 3.302170 CCAACACAAACGCTAAAACACAC 59.698 43.478 0.00 0.00 0.00 3.82
179 180 3.502920 CCAACACAAACGCTAAAACACA 58.497 40.909 0.00 0.00 0.00 3.72
180 181 2.855370 CCCAACACAAACGCTAAAACAC 59.145 45.455 0.00 0.00 0.00 3.32
181 182 2.492484 ACCCAACACAAACGCTAAAACA 59.508 40.909 0.00 0.00 0.00 2.83
182 183 3.153676 ACCCAACACAAACGCTAAAAC 57.846 42.857 0.00 0.00 0.00 2.43
183 184 3.512680 CAACCCAACACAAACGCTAAAA 58.487 40.909 0.00 0.00 0.00 1.52
184 185 2.159226 CCAACCCAACACAAACGCTAAA 60.159 45.455 0.00 0.00 0.00 1.85
185 186 1.405821 CCAACCCAACACAAACGCTAA 59.594 47.619 0.00 0.00 0.00 3.09
186 187 1.025812 CCAACCCAACACAAACGCTA 58.974 50.000 0.00 0.00 0.00 4.26
187 188 1.813192 CCAACCCAACACAAACGCT 59.187 52.632 0.00 0.00 0.00 5.07
188 189 1.880796 GCCAACCCAACACAAACGC 60.881 57.895 0.00 0.00 0.00 4.84
189 190 0.527385 CAGCCAACCCAACACAAACG 60.527 55.000 0.00 0.00 0.00 3.60
190 191 0.534873 ACAGCCAACCCAACACAAAC 59.465 50.000 0.00 0.00 0.00 2.93
191 192 0.534412 CACAGCCAACCCAACACAAA 59.466 50.000 0.00 0.00 0.00 2.83
192 193 0.613292 ACACAGCCAACCCAACACAA 60.613 50.000 0.00 0.00 0.00 3.33
193 194 1.000270 ACACAGCCAACCCAACACA 60.000 52.632 0.00 0.00 0.00 3.72
194 195 1.437160 CACACAGCCAACCCAACAC 59.563 57.895 0.00 0.00 0.00 3.32
195 196 2.422231 GCACACAGCCAACCCAACA 61.422 57.895 0.00 0.00 37.23 3.33
196 197 1.747325 ATGCACACAGCCAACCCAAC 61.747 55.000 0.00 0.00 44.83 3.77
197 198 1.457267 ATGCACACAGCCAACCCAA 60.457 52.632 0.00 0.00 44.83 4.12
198 199 1.902918 GATGCACACAGCCAACCCA 60.903 57.895 0.00 0.00 44.83 4.51
199 200 2.964978 GATGCACACAGCCAACCC 59.035 61.111 0.00 0.00 44.83 4.11
213 214 2.611473 CGGCCTCTGCATAACTAGGATG 60.611 54.545 0.00 0.00 40.13 3.51
214 215 1.620819 CGGCCTCTGCATAACTAGGAT 59.379 52.381 0.00 0.00 40.13 3.24
215 216 1.040646 CGGCCTCTGCATAACTAGGA 58.959 55.000 0.00 0.00 40.13 2.94
216 217 0.034059 CCGGCCTCTGCATAACTAGG 59.966 60.000 0.00 0.00 40.13 3.02
217 218 0.034059 CCCGGCCTCTGCATAACTAG 59.966 60.000 0.00 0.00 40.13 2.57
218 219 0.689745 ACCCGGCCTCTGCATAACTA 60.690 55.000 0.00 0.00 40.13 2.24
219 220 1.995626 ACCCGGCCTCTGCATAACT 60.996 57.895 0.00 0.00 40.13 2.24
220 221 1.819632 CACCCGGCCTCTGCATAAC 60.820 63.158 0.00 0.00 40.13 1.89
221 222 0.978667 TACACCCGGCCTCTGCATAA 60.979 55.000 0.00 0.00 40.13 1.90
222 223 0.762842 ATACACCCGGCCTCTGCATA 60.763 55.000 0.00 0.00 40.13 3.14
223 224 2.072487 ATACACCCGGCCTCTGCAT 61.072 57.895 0.00 0.00 40.13 3.96
224 225 2.687200 ATACACCCGGCCTCTGCA 60.687 61.111 0.00 0.00 40.13 4.41
225 226 2.203070 CATACACCCGGCCTCTGC 60.203 66.667 0.00 0.00 0.00 4.26
226 227 0.462047 GAACATACACCCGGCCTCTG 60.462 60.000 0.00 0.00 0.00 3.35
227 228 0.907704 TGAACATACACCCGGCCTCT 60.908 55.000 0.00 0.00 0.00 3.69
228 229 0.180406 ATGAACATACACCCGGCCTC 59.820 55.000 0.00 0.00 0.00 4.70
229 230 0.623723 AATGAACATACACCCGGCCT 59.376 50.000 0.00 0.00 0.00 5.19
230 231 2.335316 TAATGAACATACACCCGGCC 57.665 50.000 0.00 0.00 0.00 6.13
231 232 5.472137 ACAATATAATGAACATACACCCGGC 59.528 40.000 0.00 0.00 0.00 6.13
232 233 8.786826 ATACAATATAATGAACATACACCCGG 57.213 34.615 0.00 0.00 0.00 5.73
233 234 8.879759 GGATACAATATAATGAACATACACCCG 58.120 37.037 0.00 0.00 0.00 5.28
234 235 9.959721 AGGATACAATATAATGAACATACACCC 57.040 33.333 0.00 0.00 41.41 4.61
249 250 9.638176 AAAAGAAGCATCAAGAGGATACAATAT 57.362 29.630 0.00 0.00 41.41 1.28
250 251 8.896744 CAAAAGAAGCATCAAGAGGATACAATA 58.103 33.333 0.00 0.00 41.41 1.90
251 252 7.613022 TCAAAAGAAGCATCAAGAGGATACAAT 59.387 33.333 0.00 0.00 41.41 2.71
252 253 6.942005 TCAAAAGAAGCATCAAGAGGATACAA 59.058 34.615 0.00 0.00 41.41 2.41
253 254 6.475504 TCAAAAGAAGCATCAAGAGGATACA 58.524 36.000 0.00 0.00 41.41 2.29
254 255 6.458070 GCTCAAAAGAAGCATCAAGAGGATAC 60.458 42.308 0.00 0.00 39.61 2.24
255 256 5.587844 GCTCAAAAGAAGCATCAAGAGGATA 59.412 40.000 0.00 0.00 39.61 2.59
256 257 4.398673 GCTCAAAAGAAGCATCAAGAGGAT 59.601 41.667 0.00 0.00 39.61 3.24
257 258 3.755378 GCTCAAAAGAAGCATCAAGAGGA 59.245 43.478 0.00 0.00 39.61 3.71
258 259 3.119566 GGCTCAAAAGAAGCATCAAGAGG 60.120 47.826 0.00 0.00 41.66 3.69
259 260 3.504906 TGGCTCAAAAGAAGCATCAAGAG 59.495 43.478 0.00 0.00 41.66 2.85
260 261 3.489355 TGGCTCAAAAGAAGCATCAAGA 58.511 40.909 0.00 0.00 41.66 3.02
261 262 3.928727 TGGCTCAAAAGAAGCATCAAG 57.071 42.857 0.00 0.00 41.66 3.02
262 263 4.877378 ATTGGCTCAAAAGAAGCATCAA 57.123 36.364 0.00 0.00 41.66 2.57
263 264 5.981088 TTATTGGCTCAAAAGAAGCATCA 57.019 34.783 0.00 0.00 41.66 3.07
264 265 7.838771 ATTTTATTGGCTCAAAAGAAGCATC 57.161 32.000 0.00 0.00 41.66 3.91
265 266 7.879160 TGAATTTTATTGGCTCAAAAGAAGCAT 59.121 29.630 0.00 0.00 41.66 3.79
266 267 7.171337 GTGAATTTTATTGGCTCAAAAGAAGCA 59.829 33.333 0.00 0.00 41.66 3.91
267 268 7.360353 GGTGAATTTTATTGGCTCAAAAGAAGC 60.360 37.037 0.00 0.00 39.09 3.86
268 269 7.118245 GGGTGAATTTTATTGGCTCAAAAGAAG 59.882 37.037 0.00 0.00 0.00 2.85
269 270 6.934083 GGGTGAATTTTATTGGCTCAAAAGAA 59.066 34.615 0.00 0.00 0.00 2.52
270 271 6.269769 AGGGTGAATTTTATTGGCTCAAAAGA 59.730 34.615 0.00 0.00 0.00 2.52
271 272 6.466812 AGGGTGAATTTTATTGGCTCAAAAG 58.533 36.000 0.00 0.00 0.00 2.27
272 273 6.432403 AGGGTGAATTTTATTGGCTCAAAA 57.568 33.333 0.00 0.00 0.00 2.44
273 274 6.432403 AAGGGTGAATTTTATTGGCTCAAA 57.568 33.333 0.00 0.00 0.00 2.69
274 275 6.183361 ACAAAGGGTGAATTTTATTGGCTCAA 60.183 34.615 0.00 0.00 0.00 3.02
275 276 5.306678 ACAAAGGGTGAATTTTATTGGCTCA 59.693 36.000 0.00 0.00 0.00 4.26
276 277 5.793817 ACAAAGGGTGAATTTTATTGGCTC 58.206 37.500 0.00 0.00 0.00 4.70
277 278 5.566627 CGACAAAGGGTGAATTTTATTGGCT 60.567 40.000 0.00 0.00 0.00 4.75
278 279 4.625311 CGACAAAGGGTGAATTTTATTGGC 59.375 41.667 0.00 0.00 0.00 4.52
279 280 6.019779 TCGACAAAGGGTGAATTTTATTGG 57.980 37.500 0.00 0.00 0.00 3.16
280 281 7.938563 TTTCGACAAAGGGTGAATTTTATTG 57.061 32.000 0.00 0.00 0.00 1.90
281 282 8.950208 TTTTTCGACAAAGGGTGAATTTTATT 57.050 26.923 0.00 0.00 0.00 1.40
304 305 3.288092 GACTTGGAGTGGTGAGGTTTTT 58.712 45.455 0.00 0.00 0.00 1.94
305 306 2.422945 GGACTTGGAGTGGTGAGGTTTT 60.423 50.000 0.00 0.00 0.00 2.43
306 307 1.143073 GGACTTGGAGTGGTGAGGTTT 59.857 52.381 0.00 0.00 0.00 3.27
307 308 0.765510 GGACTTGGAGTGGTGAGGTT 59.234 55.000 0.00 0.00 0.00 3.50
308 309 1.128188 GGGACTTGGAGTGGTGAGGT 61.128 60.000 0.00 0.00 0.00 3.85
309 310 0.838122 AGGGACTTGGAGTGGTGAGG 60.838 60.000 0.00 0.00 27.25 3.86
310 311 0.322975 CAGGGACTTGGAGTGGTGAG 59.677 60.000 0.00 0.00 34.60 3.51
311 312 0.105194 TCAGGGACTTGGAGTGGTGA 60.105 55.000 0.00 0.00 34.60 4.02
312 313 0.764890 TTCAGGGACTTGGAGTGGTG 59.235 55.000 0.00 0.00 34.60 4.17
313 314 1.059913 CTTCAGGGACTTGGAGTGGT 58.940 55.000 0.00 0.00 34.60 4.16
314 315 1.002544 GACTTCAGGGACTTGGAGTGG 59.997 57.143 0.00 0.00 34.60 4.00
315 316 1.002544 GGACTTCAGGGACTTGGAGTG 59.997 57.143 0.00 0.00 34.60 3.51
327 328 5.105392 GGAGCATATGGATAGAGGACTTCAG 60.105 48.000 4.56 0.00 0.00 3.02
354 357 4.823989 ACTTGCAAGATTCAAGCTTACACT 59.176 37.500 32.50 1.12 43.40 3.55
355 358 5.113502 ACTTGCAAGATTCAAGCTTACAC 57.886 39.130 32.50 0.00 43.40 2.90
387 390 5.178623 TGTTATGGAAAGTAGTGCGAAACAG 59.821 40.000 0.00 0.00 0.00 3.16
431 436 9.419297 GGTTGATGCACTATATATAAAAGACGA 57.581 33.333 0.00 0.00 0.00 4.20
432 437 9.203421 TGGTTGATGCACTATATATAAAAGACG 57.797 33.333 0.00 0.00 0.00 4.18
438 443 7.659799 ACGCTTTGGTTGATGCACTATATATAA 59.340 33.333 0.00 0.00 0.00 0.98
445 450 1.535028 CACGCTTTGGTTGATGCACTA 59.465 47.619 0.00 0.00 0.00 2.74
446 451 0.311790 CACGCTTTGGTTGATGCACT 59.688 50.000 0.00 0.00 0.00 4.40
473 478 6.018507 GCCCATTTGATTTCTATTGCATTGAC 60.019 38.462 0.00 0.00 0.00 3.18
533 538 5.959618 AAGGGCAAAACACTCTTACATAC 57.040 39.130 0.00 0.00 0.00 2.39
534 539 6.653320 CACTAAGGGCAAAACACTCTTACATA 59.347 38.462 0.00 0.00 0.00 2.29
535 540 5.473504 CACTAAGGGCAAAACACTCTTACAT 59.526 40.000 0.00 0.00 0.00 2.29
748 762 4.546570 GAGAACCGAATTTTCAAAGGTGG 58.453 43.478 0.00 0.00 35.08 4.61
791 805 2.431942 GCCGAGACGAAGGCGAAA 60.432 61.111 0.00 0.00 44.22 3.46
849 863 0.815734 ATGCAGAAACAGAGCATGCC 59.184 50.000 15.66 6.03 46.34 4.40
860 874 1.522668 CGAGGTTGTCCATGCAGAAA 58.477 50.000 0.00 0.00 35.89 2.52
861 875 0.955428 GCGAGGTTGTCCATGCAGAA 60.955 55.000 0.00 0.00 36.54 3.02
1014 1028 2.611722 GCAGCTCTTCTCGAAGGAAGTT 60.612 50.000 12.58 0.71 42.19 2.66
1015 1029 1.067213 GCAGCTCTTCTCGAAGGAAGT 60.067 52.381 12.58 0.00 42.19 3.01
1351 1365 0.323633 TTGACGTAGATCCCCACGGA 60.324 55.000 14.33 0.00 44.33 4.69
1462 1476 1.550976 GAGGGTACTGTGGACTTCAGG 59.449 57.143 0.00 0.00 37.25 3.86
1499 1513 4.036734 ACTTTGATAGTTGTGTGGTGCAAG 59.963 41.667 0.00 0.00 31.29 4.01
1529 1543 0.250901 ACTACTTGGGCTTGTGCTGG 60.251 55.000 0.00 0.00 39.59 4.85
1532 1546 1.160137 CTGACTACTTGGGCTTGTGC 58.840 55.000 0.00 0.00 38.76 4.57
1538 1552 2.289565 GCCAATACTGACTACTTGGGC 58.710 52.381 0.00 0.00 38.84 5.36
1539 1553 2.238646 TGGCCAATACTGACTACTTGGG 59.761 50.000 0.61 0.00 38.84 4.12
1540 1554 3.627395 TGGCCAATACTGACTACTTGG 57.373 47.619 0.61 0.00 40.89 3.61
1543 1557 2.840651 AGCTTGGCCAATACTGACTACT 59.159 45.455 20.85 2.73 0.00 2.57
1544 1558 2.939103 CAGCTTGGCCAATACTGACTAC 59.061 50.000 31.09 10.67 30.42 2.73
1545 1559 2.092968 CCAGCTTGGCCAATACTGACTA 60.093 50.000 34.11 8.71 30.42 2.59
1547 1561 1.098050 CCAGCTTGGCCAATACTGAC 58.902 55.000 34.11 16.47 30.42 3.51
1568 1584 1.001048 CCAAGTTCATGCCGGCATATG 60.001 52.381 39.94 30.41 34.91 1.78
1586 1602 1.143183 GCCGGCTATTCTCGAACCA 59.857 57.895 22.15 0.00 0.00 3.67
1587 1603 1.949631 CGCCGGCTATTCTCGAACC 60.950 63.158 26.68 0.00 0.00 3.62
1591 1607 0.730834 CATCTCGCCGGCTATTCTCG 60.731 60.000 26.68 6.92 0.00 4.04
1618 1634 4.503123 GGGGTTTTCTGAGGAAACAAATGG 60.503 45.833 17.49 0.00 40.63 3.16
1633 1649 6.399639 TGTTGAATAAGTTCAGGGGTTTTC 57.600 37.500 0.00 0.00 44.62 2.29
1647 1663 4.505808 CCCATGCATTGCTTGTTGAATAA 58.494 39.130 19.53 0.00 32.83 1.40
1654 1670 2.662070 GGGCCCATGCATTGCTTGT 61.662 57.895 19.95 0.73 40.13 3.16
1674 1690 2.955660 GGGAAAACAGACCATTGACACA 59.044 45.455 0.00 0.00 0.00 3.72
1675 1691 3.222603 AGGGAAAACAGACCATTGACAC 58.777 45.455 0.00 0.00 0.00 3.67
1676 1692 3.593442 AGGGAAAACAGACCATTGACA 57.407 42.857 0.00 0.00 0.00 3.58
1677 1693 4.584743 AGAAAGGGAAAACAGACCATTGAC 59.415 41.667 0.00 0.00 30.58 3.18
1678 1694 4.803452 AGAAAGGGAAAACAGACCATTGA 58.197 39.130 0.00 0.00 30.58 2.57
1679 1695 4.829492 AGAGAAAGGGAAAACAGACCATTG 59.171 41.667 0.00 0.00 30.58 2.82
1680 1696 5.066913 AGAGAAAGGGAAAACAGACCATT 57.933 39.130 0.00 0.00 0.00 3.16
1681 1697 4.731313 AGAGAAAGGGAAAACAGACCAT 57.269 40.909 0.00 0.00 0.00 3.55
1682 1698 4.519906 AAGAGAAAGGGAAAACAGACCA 57.480 40.909 0.00 0.00 0.00 4.02
1683 1699 5.622180 AGTAAGAGAAAGGGAAAACAGACC 58.378 41.667 0.00 0.00 0.00 3.85
1684 1700 5.405873 CGAGTAAGAGAAAGGGAAAACAGAC 59.594 44.000 0.00 0.00 0.00 3.51
1685 1701 5.070047 ACGAGTAAGAGAAAGGGAAAACAGA 59.930 40.000 0.00 0.00 0.00 3.41
1686 1702 5.298347 ACGAGTAAGAGAAAGGGAAAACAG 58.702 41.667 0.00 0.00 0.00 3.16
1687 1703 5.286267 ACGAGTAAGAGAAAGGGAAAACA 57.714 39.130 0.00 0.00 0.00 2.83
1688 1704 6.128607 GCTAACGAGTAAGAGAAAGGGAAAAC 60.129 42.308 0.00 0.00 0.00 2.43
1689 1705 5.930569 GCTAACGAGTAAGAGAAAGGGAAAA 59.069 40.000 0.00 0.00 0.00 2.29
1690 1706 5.476614 GCTAACGAGTAAGAGAAAGGGAAA 58.523 41.667 0.00 0.00 0.00 3.13
1691 1707 4.081807 GGCTAACGAGTAAGAGAAAGGGAA 60.082 45.833 0.00 0.00 0.00 3.97
1692 1708 3.446516 GGCTAACGAGTAAGAGAAAGGGA 59.553 47.826 0.00 0.00 0.00 4.20
1693 1709 3.430513 GGGCTAACGAGTAAGAGAAAGGG 60.431 52.174 0.00 0.00 0.00 3.95
1694 1710 3.430513 GGGGCTAACGAGTAAGAGAAAGG 60.431 52.174 0.00 0.00 0.00 3.11
1695 1711 3.194968 TGGGGCTAACGAGTAAGAGAAAG 59.805 47.826 0.00 0.00 0.00 2.62
1696 1712 3.056322 GTGGGGCTAACGAGTAAGAGAAA 60.056 47.826 0.00 0.00 0.00 2.52
1697 1713 2.494870 GTGGGGCTAACGAGTAAGAGAA 59.505 50.000 0.00 0.00 0.00 2.87
1698 1714 2.097825 GTGGGGCTAACGAGTAAGAGA 58.902 52.381 0.00 0.00 0.00 3.10
1699 1715 2.100989 AGTGGGGCTAACGAGTAAGAG 58.899 52.381 0.00 0.00 0.00 2.85
1700 1716 1.822990 CAGTGGGGCTAACGAGTAAGA 59.177 52.381 0.00 0.00 0.00 2.10
1701 1717 1.822990 TCAGTGGGGCTAACGAGTAAG 59.177 52.381 0.00 0.00 0.00 2.34
1702 1718 1.547372 GTCAGTGGGGCTAACGAGTAA 59.453 52.381 0.00 0.00 0.00 2.24
1703 1719 1.180029 GTCAGTGGGGCTAACGAGTA 58.820 55.000 0.00 0.00 0.00 2.59
1704 1720 0.830444 TGTCAGTGGGGCTAACGAGT 60.830 55.000 0.00 0.00 0.00 4.18
1705 1721 0.108615 CTGTCAGTGGGGCTAACGAG 60.109 60.000 0.00 0.00 0.00 4.18
1706 1722 0.830444 ACTGTCAGTGGGGCTAACGA 60.830 55.000 4.21 0.00 0.00 3.85
1707 1723 0.892755 TACTGTCAGTGGGGCTAACG 59.107 55.000 16.03 0.00 0.00 3.18
1708 1724 2.500098 TGATACTGTCAGTGGGGCTAAC 59.500 50.000 16.03 0.00 31.80 2.34
1709 1725 2.827755 TGATACTGTCAGTGGGGCTAA 58.172 47.619 16.03 0.00 31.80 3.09
1710 1726 2.543037 TGATACTGTCAGTGGGGCTA 57.457 50.000 16.03 0.00 31.80 3.93
1711 1727 1.556911 CTTGATACTGTCAGTGGGGCT 59.443 52.381 16.03 0.00 38.29 5.19
1712 1728 1.279271 ACTTGATACTGTCAGTGGGGC 59.721 52.381 16.03 2.94 38.29 5.80
1713 1729 2.567169 TGACTTGATACTGTCAGTGGGG 59.433 50.000 16.03 4.15 38.15 4.96
1714 1730 3.961480 TGACTTGATACTGTCAGTGGG 57.039 47.619 16.03 3.83 38.15 4.61
1715 1731 3.997021 GGTTGACTTGATACTGTCAGTGG 59.003 47.826 16.03 3.51 42.98 4.00
1716 1732 4.631131 TGGTTGACTTGATACTGTCAGTG 58.369 43.478 16.03 0.67 42.98 3.66
1717 1733 4.955811 TGGTTGACTTGATACTGTCAGT 57.044 40.909 10.99 10.99 42.98 3.41
1722 1738 6.118170 AGGATCAATGGTTGACTTGATACTG 58.882 40.000 8.77 0.00 46.49 2.74
1726 1742 7.121759 CACTAAAGGATCAATGGTTGACTTGAT 59.878 37.037 0.00 0.00 43.48 2.57
1758 1794 4.424626 TCACTTACTGAACGATGCAGATC 58.575 43.478 10.04 0.00 36.86 2.75
2037 2073 1.679680 CATGGATGATGAAGTGTGCCC 59.320 52.381 0.00 0.00 33.31 5.36
2038 2074 2.646930 TCATGGATGATGAAGTGTGCC 58.353 47.619 0.00 0.00 38.19 5.01
2116 2159 0.596859 GCACGCTACGGTCTTATCCC 60.597 60.000 0.00 0.00 0.00 3.85
2191 2234 1.069823 CTATCTGAATCTGGCGTGGCT 59.930 52.381 0.00 0.00 0.00 4.75
2853 2903 0.389817 TCCAGAAGAATGTGCCGACG 60.390 55.000 0.00 0.00 0.00 5.12
2854 2904 1.079503 GTCCAGAAGAATGTGCCGAC 58.920 55.000 0.00 0.00 0.00 4.79
2855 2905 0.036388 GGTCCAGAAGAATGTGCCGA 60.036 55.000 0.00 0.00 0.00 5.54
2856 2906 0.321564 TGGTCCAGAAGAATGTGCCG 60.322 55.000 0.00 0.00 0.00 5.69
2857 2907 1.909700 TTGGTCCAGAAGAATGTGCC 58.090 50.000 0.00 0.00 0.00 5.01
2858 2908 4.488879 GATTTTGGTCCAGAAGAATGTGC 58.511 43.478 0.85 0.00 0.00 4.57
2859 2909 4.455533 TCGATTTTGGTCCAGAAGAATGTG 59.544 41.667 0.85 0.00 0.00 3.21
2860 2910 4.455877 GTCGATTTTGGTCCAGAAGAATGT 59.544 41.667 0.85 0.00 0.00 2.71
2861 2911 4.436050 CGTCGATTTTGGTCCAGAAGAATG 60.436 45.833 0.85 0.00 0.00 2.67
2862 2912 3.684788 CGTCGATTTTGGTCCAGAAGAAT 59.315 43.478 0.85 0.00 0.00 2.40
2863 2913 3.064207 CGTCGATTTTGGTCCAGAAGAA 58.936 45.455 0.85 0.00 0.00 2.52
2864 2914 2.297880 TCGTCGATTTTGGTCCAGAAGA 59.702 45.455 0.85 0.00 0.00 2.87
2865 2915 2.683968 TCGTCGATTTTGGTCCAGAAG 58.316 47.619 0.85 0.00 0.00 2.85
2866 2916 2.823924 TCGTCGATTTTGGTCCAGAA 57.176 45.000 0.00 0.00 0.00 3.02
2867 2917 2.823924 TTCGTCGATTTTGGTCCAGA 57.176 45.000 0.00 0.00 0.00 3.86
2868 2918 4.181578 AGTATTCGTCGATTTTGGTCCAG 58.818 43.478 0.00 0.00 0.00 3.86
2869 2919 4.178540 GAGTATTCGTCGATTTTGGTCCA 58.821 43.478 0.00 0.00 0.00 4.02
2870 2920 4.178540 TGAGTATTCGTCGATTTTGGTCC 58.821 43.478 0.00 0.00 0.00 4.46
2871 2921 5.773239 TTGAGTATTCGTCGATTTTGGTC 57.227 39.130 0.00 0.00 0.00 4.02
2872 2922 6.594159 AGATTTGAGTATTCGTCGATTTTGGT 59.406 34.615 0.00 0.00 0.00 3.67
2873 2923 7.005062 AGATTTGAGTATTCGTCGATTTTGG 57.995 36.000 0.00 0.00 0.00 3.28
2874 2924 8.808529 AGTAGATTTGAGTATTCGTCGATTTTG 58.191 33.333 0.00 0.00 0.00 2.44
2875 2925 8.928270 AGTAGATTTGAGTATTCGTCGATTTT 57.072 30.769 0.00 0.00 0.00 1.82
2876 2926 8.928270 AAGTAGATTTGAGTATTCGTCGATTT 57.072 30.769 0.00 0.00 0.00 2.17
2879 2929 9.661187 GATTAAGTAGATTTGAGTATTCGTCGA 57.339 33.333 0.00 0.00 0.00 4.20
2880 2930 8.619796 CGATTAAGTAGATTTGAGTATTCGTCG 58.380 37.037 0.00 0.00 0.00 5.12
2881 2931 9.448294 ACGATTAAGTAGATTTGAGTATTCGTC 57.552 33.333 0.00 0.00 0.00 4.20
2882 2932 9.448294 GACGATTAAGTAGATTTGAGTATTCGT 57.552 33.333 0.00 0.00 0.00 3.85
2883 2933 9.447040 TGACGATTAAGTAGATTTGAGTATTCG 57.553 33.333 0.00 0.00 0.00 3.34
2887 2937 9.784680 GTTCTGACGATTAAGTAGATTTGAGTA 57.215 33.333 0.00 0.00 0.00 2.59
2888 2938 8.304596 TGTTCTGACGATTAAGTAGATTTGAGT 58.695 33.333 0.00 0.00 0.00 3.41
2889 2939 8.587950 GTGTTCTGACGATTAAGTAGATTTGAG 58.412 37.037 0.00 0.00 0.00 3.02
2890 2940 7.272731 CGTGTTCTGACGATTAAGTAGATTTGA 59.727 37.037 0.00 0.00 42.10 2.69
2891 2941 7.272731 TCGTGTTCTGACGATTAAGTAGATTTG 59.727 37.037 0.00 0.00 43.26 2.32
2892 2942 7.310664 TCGTGTTCTGACGATTAAGTAGATTT 58.689 34.615 0.00 0.00 43.26 2.17
2893 2943 6.849502 TCGTGTTCTGACGATTAAGTAGATT 58.150 36.000 0.00 0.00 43.26 2.40
2894 2944 6.315642 TCTCGTGTTCTGACGATTAAGTAGAT 59.684 38.462 0.00 0.00 46.72 1.98
2895 2945 5.640783 TCTCGTGTTCTGACGATTAAGTAGA 59.359 40.000 0.00 0.00 46.72 2.59
2896 2946 5.733572 GTCTCGTGTTCTGACGATTAAGTAG 59.266 44.000 0.00 0.00 46.72 2.57
2897 2947 5.179929 TGTCTCGTGTTCTGACGATTAAGTA 59.820 40.000 0.00 0.00 46.72 2.24
2898 2948 4.023450 TGTCTCGTGTTCTGACGATTAAGT 60.023 41.667 0.00 0.00 46.72 2.24
2899 2949 4.473199 TGTCTCGTGTTCTGACGATTAAG 58.527 43.478 0.00 0.00 46.72 1.85
2900 2950 4.473199 CTGTCTCGTGTTCTGACGATTAA 58.527 43.478 0.00 0.00 46.72 1.40
2901 2951 3.669824 GCTGTCTCGTGTTCTGACGATTA 60.670 47.826 0.00 0.00 46.72 1.75
2902 2952 2.922758 GCTGTCTCGTGTTCTGACGATT 60.923 50.000 0.00 0.00 46.72 3.34
2903 2953 1.401670 GCTGTCTCGTGTTCTGACGAT 60.402 52.381 0.00 0.00 46.72 3.73
2904 2954 0.040336 GCTGTCTCGTGTTCTGACGA 60.040 55.000 0.00 0.00 45.84 4.20
2905 2955 0.039978 AGCTGTCTCGTGTTCTGACG 60.040 55.000 0.00 0.00 40.83 4.35
2906 2956 2.981140 GTTAGCTGTCTCGTGTTCTGAC 59.019 50.000 0.00 0.00 0.00 3.51
2907 2957 2.350484 CGTTAGCTGTCTCGTGTTCTGA 60.350 50.000 0.00 0.00 0.00 3.27
2908 2958 1.979469 CGTTAGCTGTCTCGTGTTCTG 59.021 52.381 0.00 0.00 0.00 3.02
2909 2959 1.878088 TCGTTAGCTGTCTCGTGTTCT 59.122 47.619 0.00 0.00 0.00 3.01
2910 2960 2.327081 TCGTTAGCTGTCTCGTGTTC 57.673 50.000 0.00 0.00 0.00 3.18
2911 2961 2.787601 TTCGTTAGCTGTCTCGTGTT 57.212 45.000 0.00 0.00 0.00 3.32
2912 2962 2.292569 TCTTTCGTTAGCTGTCTCGTGT 59.707 45.455 0.00 0.00 0.00 4.49
2913 2963 2.929960 TCTTTCGTTAGCTGTCTCGTG 58.070 47.619 0.00 0.00 0.00 4.35
2914 2964 3.851976 ATCTTTCGTTAGCTGTCTCGT 57.148 42.857 0.00 0.00 0.00 4.18
2915 2965 6.627690 TTTAATCTTTCGTTAGCTGTCTCG 57.372 37.500 0.00 0.00 0.00 4.04
2916 2966 8.240883 TCTTTTAATCTTTCGTTAGCTGTCTC 57.759 34.615 0.00 0.00 0.00 3.36
2917 2967 8.496751 GTTCTTTTAATCTTTCGTTAGCTGTCT 58.503 33.333 0.00 0.00 0.00 3.41
2918 2968 8.280497 TGTTCTTTTAATCTTTCGTTAGCTGTC 58.720 33.333 0.00 0.00 0.00 3.51
2919 2969 8.149973 TGTTCTTTTAATCTTTCGTTAGCTGT 57.850 30.769 0.00 0.00 0.00 4.40
2920 2970 9.267096 GATGTTCTTTTAATCTTTCGTTAGCTG 57.733 33.333 0.00 0.00 0.00 4.24
2921 2971 9.220767 AGATGTTCTTTTAATCTTTCGTTAGCT 57.779 29.630 0.00 0.00 0.00 3.32
2922 2972 9.267096 CAGATGTTCTTTTAATCTTTCGTTAGC 57.733 33.333 0.00 0.00 0.00 3.09
2935 2985 9.091784 CGAGAGATGATTTCAGATGTTCTTTTA 57.908 33.333 0.00 0.00 0.00 1.52
2936 2986 7.413877 GCGAGAGATGATTTCAGATGTTCTTTT 60.414 37.037 0.00 0.00 0.00 2.27
2937 2987 6.036953 GCGAGAGATGATTTCAGATGTTCTTT 59.963 38.462 0.00 0.00 0.00 2.52
2938 2988 5.523188 GCGAGAGATGATTTCAGATGTTCTT 59.477 40.000 0.00 0.00 0.00 2.52
2939 2989 5.049167 GCGAGAGATGATTTCAGATGTTCT 58.951 41.667 0.00 0.00 0.00 3.01
2940 2990 4.807834 TGCGAGAGATGATTTCAGATGTTC 59.192 41.667 0.00 0.00 0.00 3.18
2941 2991 4.763073 TGCGAGAGATGATTTCAGATGTT 58.237 39.130 0.00 0.00 0.00 2.71
2942 2992 4.397481 TGCGAGAGATGATTTCAGATGT 57.603 40.909 0.00 0.00 0.00 3.06
2943 2993 5.926214 AATGCGAGAGATGATTTCAGATG 57.074 39.130 0.00 0.00 0.00 2.90
2944 2994 6.318144 ACAAAATGCGAGAGATGATTTCAGAT 59.682 34.615 0.00 0.00 0.00 2.90
2945 2995 5.645067 ACAAAATGCGAGAGATGATTTCAGA 59.355 36.000 0.00 0.00 0.00 3.27
2946 2996 5.877031 ACAAAATGCGAGAGATGATTTCAG 58.123 37.500 0.00 0.00 0.00 3.02
2947 2997 5.885230 ACAAAATGCGAGAGATGATTTCA 57.115 34.783 0.00 0.00 0.00 2.69
2948 2998 6.250104 GTCAACAAAATGCGAGAGATGATTTC 59.750 38.462 0.00 0.00 0.00 2.17
2949 2999 6.088824 GTCAACAAAATGCGAGAGATGATTT 58.911 36.000 0.00 0.00 0.00 2.17
2950 3000 5.181811 TGTCAACAAAATGCGAGAGATGATT 59.818 36.000 0.00 0.00 0.00 2.57
2951 3001 4.696877 TGTCAACAAAATGCGAGAGATGAT 59.303 37.500 0.00 0.00 0.00 2.45
2952 3002 4.064388 TGTCAACAAAATGCGAGAGATGA 58.936 39.130 0.00 0.00 0.00 2.92
2953 3003 4.408993 TGTCAACAAAATGCGAGAGATG 57.591 40.909 0.00 0.00 0.00 2.90
2954 3004 5.437289 TTTGTCAACAAAATGCGAGAGAT 57.563 34.783 5.86 0.00 42.26 2.75
2955 3005 4.891627 TTTGTCAACAAAATGCGAGAGA 57.108 36.364 5.86 0.00 42.26 3.10
2966 3016 2.950975 TGCTGCTGAGATTTGTCAACAA 59.049 40.909 0.00 0.00 0.00 2.83
2967 3017 2.574450 TGCTGCTGAGATTTGTCAACA 58.426 42.857 0.00 0.00 0.00 3.33
2968 3018 3.243168 TGTTGCTGCTGAGATTTGTCAAC 60.243 43.478 0.00 0.00 34.76 3.18
2969 3019 2.950975 TGTTGCTGCTGAGATTTGTCAA 59.049 40.909 0.00 0.00 0.00 3.18
2970 3020 2.291465 GTGTTGCTGCTGAGATTTGTCA 59.709 45.455 0.00 0.00 0.00 3.58
2971 3021 2.291465 TGTGTTGCTGCTGAGATTTGTC 59.709 45.455 0.00 0.00 0.00 3.18
2972 3022 2.300433 TGTGTTGCTGCTGAGATTTGT 58.700 42.857 0.00 0.00 0.00 2.83
2973 3023 3.570926 ATGTGTTGCTGCTGAGATTTG 57.429 42.857 0.00 0.00 0.00 2.32
2974 3024 5.336213 CCTTAATGTGTTGCTGCTGAGATTT 60.336 40.000 0.00 0.00 0.00 2.17
2975 3025 4.157289 CCTTAATGTGTTGCTGCTGAGATT 59.843 41.667 0.00 0.00 0.00 2.40
2976 3026 3.693085 CCTTAATGTGTTGCTGCTGAGAT 59.307 43.478 0.00 0.00 0.00 2.75
2977 3027 3.076621 CCTTAATGTGTTGCTGCTGAGA 58.923 45.455 0.00 0.00 0.00 3.27
2978 3028 2.816087 ACCTTAATGTGTTGCTGCTGAG 59.184 45.455 0.00 0.00 0.00 3.35
2979 3029 2.862541 ACCTTAATGTGTTGCTGCTGA 58.137 42.857 0.00 0.00 0.00 4.26
2980 3030 3.004629 TGAACCTTAATGTGTTGCTGCTG 59.995 43.478 0.00 0.00 0.00 4.41
2981 3031 3.221771 TGAACCTTAATGTGTTGCTGCT 58.778 40.909 0.00 0.00 0.00 4.24
2982 3032 3.568538 CTGAACCTTAATGTGTTGCTGC 58.431 45.455 0.00 0.00 0.00 5.25
2983 3033 3.820467 TCCTGAACCTTAATGTGTTGCTG 59.180 43.478 0.00 0.00 0.00 4.41
2984 3034 4.074970 CTCCTGAACCTTAATGTGTTGCT 58.925 43.478 0.00 0.00 0.00 3.91
2985 3035 3.821033 ACTCCTGAACCTTAATGTGTTGC 59.179 43.478 0.00 0.00 0.00 4.17
2986 3036 5.334105 CGAACTCCTGAACCTTAATGTGTTG 60.334 44.000 0.00 0.00 0.00 3.33
2987 3037 4.755123 CGAACTCCTGAACCTTAATGTGTT 59.245 41.667 0.00 0.00 0.00 3.32
2988 3038 4.315803 CGAACTCCTGAACCTTAATGTGT 58.684 43.478 0.00 0.00 0.00 3.72
2989 3039 3.684788 CCGAACTCCTGAACCTTAATGTG 59.315 47.826 0.00 0.00 0.00 3.21
2990 3040 3.581332 TCCGAACTCCTGAACCTTAATGT 59.419 43.478 0.00 0.00 0.00 2.71
2991 3041 4.202245 TCCGAACTCCTGAACCTTAATG 57.798 45.455 0.00 0.00 0.00 1.90
2992 3042 4.903045 TTCCGAACTCCTGAACCTTAAT 57.097 40.909 0.00 0.00 0.00 1.40
2993 3043 4.575885 CATTCCGAACTCCTGAACCTTAA 58.424 43.478 0.00 0.00 0.00 1.85
2994 3044 3.618997 GCATTCCGAACTCCTGAACCTTA 60.619 47.826 0.00 0.00 0.00 2.69
2995 3045 2.876079 GCATTCCGAACTCCTGAACCTT 60.876 50.000 0.00 0.00 0.00 3.50
2996 3046 1.339151 GCATTCCGAACTCCTGAACCT 60.339 52.381 0.00 0.00 0.00 3.50
2997 3047 1.087501 GCATTCCGAACTCCTGAACC 58.912 55.000 0.00 0.00 0.00 3.62
2998 3048 1.087501 GGCATTCCGAACTCCTGAAC 58.912 55.000 0.00 0.00 0.00 3.18
2999 3049 0.690192 TGGCATTCCGAACTCCTGAA 59.310 50.000 0.00 0.00 34.14 3.02
3000 3050 0.250234 CTGGCATTCCGAACTCCTGA 59.750 55.000 0.00 0.00 34.14 3.86
3001 3051 0.250234 TCTGGCATTCCGAACTCCTG 59.750 55.000 0.00 2.88 34.14 3.86
3002 3052 0.250513 GTCTGGCATTCCGAACTCCT 59.749 55.000 0.00 0.00 34.14 3.69
3003 3053 0.250513 AGTCTGGCATTCCGAACTCC 59.749 55.000 0.00 0.00 34.14 3.85
3004 3054 1.363744 CAGTCTGGCATTCCGAACTC 58.636 55.000 0.00 0.00 34.14 3.01
3005 3055 0.036010 CCAGTCTGGCATTCCGAACT 60.036 55.000 5.79 0.00 34.14 3.01
3006 3056 1.026718 CCCAGTCTGGCATTCCGAAC 61.027 60.000 13.99 0.00 35.79 3.95
3007 3057 1.198094 TCCCAGTCTGGCATTCCGAA 61.198 55.000 13.99 0.00 35.79 4.30
3008 3058 1.612146 TCCCAGTCTGGCATTCCGA 60.612 57.895 13.99 1.15 35.79 4.55
3009 3059 1.450312 GTCCCAGTCTGGCATTCCG 60.450 63.158 13.99 0.00 35.79 4.30
3010 3060 1.134371 GTAGTCCCAGTCTGGCATTCC 60.134 57.143 13.99 0.00 35.79 3.01
3011 3061 1.555075 TGTAGTCCCAGTCTGGCATTC 59.445 52.381 13.99 3.39 35.79 2.67
3012 3062 1.656587 TGTAGTCCCAGTCTGGCATT 58.343 50.000 13.99 0.00 35.79 3.56
3013 3063 3.399234 TGTAGTCCCAGTCTGGCAT 57.601 52.632 13.99 3.79 35.79 4.40
3014 3064 4.966247 TGTAGTCCCAGTCTGGCA 57.034 55.556 13.99 2.62 35.79 4.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.