Multiple sequence alignment - TraesCS2D01G282500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G282500 chr2D 100.000 2210 0 0 1 2210 355451184 355448975 0.000000e+00 4082
1 TraesCS2D01G282500 chr2A 91.228 1197 58 20 570 1741 475583014 475581840 0.000000e+00 1585
2 TraesCS2D01G282500 chr2A 93.048 187 7 2 2005 2190 30311639 30311820 3.620000e-68 268
3 TraesCS2D01G282500 chr2A 88.742 151 10 3 417 561 475583208 475583059 6.270000e-41 178
4 TraesCS2D01G282500 chr2B 89.630 1244 62 25 468 1667 423098871 423097651 0.000000e+00 1520
5 TraesCS2D01G282500 chr2B 82.653 196 22 7 1697 1885 526499545 526499735 1.760000e-36 163
6 TraesCS2D01G282500 chr2B 97.647 85 1 1 1551 1635 529262291 529262374 6.360000e-31 145
7 TraesCS2D01G282500 chr1A 93.617 188 6 2 2004 2190 91172606 91172788 2.160000e-70 276
8 TraesCS2D01G282500 chr6A 93.085 188 7 2 2004 2190 104306960 104307142 1.010000e-68 270
9 TraesCS2D01G282500 chr6A 91.089 202 9 5 1991 2190 426635817 426635623 4.680000e-67 265
10 TraesCS2D01G282500 chr6B 93.478 184 6 2 2008 2190 580307951 580307773 3.620000e-68 268
11 TraesCS2D01G282500 chr5A 93.478 184 6 2 2008 2190 630123780 630123958 3.620000e-68 268
12 TraesCS2D01G282500 chr4A 93.048 187 7 2 2005 2190 93621678 93621859 3.620000e-68 268
13 TraesCS2D01G282500 chr4A 93.478 184 6 3 2008 2190 513328000 513328178 3.620000e-68 268
14 TraesCS2D01G282500 chr4A 97.701 87 0 2 1554 1638 467261671 467261585 4.920000e-32 148
15 TraesCS2D01G282500 chr4A 98.810 84 0 1 1556 1638 619145393 619145310 4.920000e-32 148
16 TraesCS2D01G282500 chr7D 93.011 186 7 2 2005 2189 554577619 554577799 1.300000e-67 267
17 TraesCS2D01G282500 chr7B 87.083 240 22 5 1697 1927 161441891 161441652 1.680000e-66 263
18 TraesCS2D01G282500 chr3D 84.021 194 22 5 1697 1881 164983524 164983717 6.270000e-41 178
19 TraesCS2D01G282500 chr5D 98.824 85 0 1 1556 1639 548877994 548878078 1.370000e-32 150
20 TraesCS2D01G282500 chr5D 98.795 83 1 0 1556 1638 522038345 522038263 4.920000e-32 148
21 TraesCS2D01G282500 chr5D 97.647 85 0 2 1555 1638 548346280 548346197 6.360000e-31 145
22 TraesCS2D01G282500 chr3B 98.795 83 1 0 1556 1638 672874567 672874485 4.920000e-32 148


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G282500 chr2D 355448975 355451184 2209 True 4082.0 4082 100.000 1 2210 1 chr2D.!!$R1 2209
1 TraesCS2D01G282500 chr2A 475581840 475583208 1368 True 881.5 1585 89.985 417 1741 2 chr2A.!!$R1 1324
2 TraesCS2D01G282500 chr2B 423097651 423098871 1220 True 1520.0 1520 89.630 468 1667 1 chr2B.!!$R1 1199


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
128 129 0.032952 TTTTGACGGAGAGGACGGTG 59.967 55.0 0.0 0.0 35.23 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1824 1907 0.02811 GCGCATTTTCTTCCCGCTAG 59.972 55.0 0.3 0.0 41.28 3.42 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.434884 ACCGGCATGCGAGAGTTG 60.435 61.111 12.44 0.00 0.00 3.16
18 19 2.125552 CCGGCATGCGAGAGTTGA 60.126 61.111 12.44 0.00 0.00 3.18
19 20 1.741401 CCGGCATGCGAGAGTTGAA 60.741 57.895 12.44 0.00 0.00 2.69
20 21 1.699656 CCGGCATGCGAGAGTTGAAG 61.700 60.000 12.44 0.00 0.00 3.02
21 22 1.699656 CGGCATGCGAGAGTTGAAGG 61.700 60.000 12.44 0.00 0.00 3.46
22 23 1.427020 GCATGCGAGAGTTGAAGGC 59.573 57.895 0.00 0.00 0.00 4.35
23 24 1.986575 GCATGCGAGAGTTGAAGGCC 61.987 60.000 0.00 0.00 0.00 5.19
24 25 1.448540 ATGCGAGAGTTGAAGGCCG 60.449 57.895 0.00 0.00 0.00 6.13
25 26 2.815647 GCGAGAGTTGAAGGCCGG 60.816 66.667 0.00 0.00 0.00 6.13
26 27 2.815647 CGAGAGTTGAAGGCCGGC 60.816 66.667 21.18 21.18 0.00 6.13
27 28 2.815647 GAGAGTTGAAGGCCGGCG 60.816 66.667 22.54 0.00 0.00 6.46
28 29 3.296709 GAGAGTTGAAGGCCGGCGA 62.297 63.158 22.54 0.32 0.00 5.54
29 30 3.119096 GAGTTGAAGGCCGGCGAC 61.119 66.667 22.54 14.55 0.00 5.19
30 31 4.699522 AGTTGAAGGCCGGCGACC 62.700 66.667 22.54 6.17 0.00 4.79
32 33 4.257654 TTGAAGGCCGGCGACCAA 62.258 61.111 22.54 19.80 0.00 3.67
33 34 3.561120 TTGAAGGCCGGCGACCAAT 62.561 57.895 22.54 2.00 0.00 3.16
34 35 3.508840 GAAGGCCGGCGACCAATG 61.509 66.667 22.54 0.00 0.00 2.82
40 41 3.361158 CGGCGACCAATGGTGCAA 61.361 61.111 10.84 0.00 35.25 4.08
41 42 2.913765 CGGCGACCAATGGTGCAAA 61.914 57.895 10.84 0.00 35.25 3.68
42 43 1.080569 GGCGACCAATGGTGCAAAG 60.081 57.895 10.84 0.00 35.25 2.77
43 44 1.659794 GCGACCAATGGTGCAAAGT 59.340 52.632 10.84 0.00 35.25 2.66
44 45 0.664166 GCGACCAATGGTGCAAAGTG 60.664 55.000 10.84 0.00 35.25 3.16
45 46 0.664166 CGACCAATGGTGCAAAGTGC 60.664 55.000 10.84 0.00 45.29 4.40
46 47 0.675633 GACCAATGGTGCAAAGTGCT 59.324 50.000 10.84 0.00 45.31 4.40
47 48 1.885887 GACCAATGGTGCAAAGTGCTA 59.114 47.619 10.84 0.00 45.31 3.49
48 49 1.613437 ACCAATGGTGCAAAGTGCTAC 59.387 47.619 3.09 0.00 45.31 3.58
49 50 1.612950 CCAATGGTGCAAAGTGCTACA 59.387 47.619 1.43 1.28 45.31 2.74
50 51 2.035704 CCAATGGTGCAAAGTGCTACAA 59.964 45.455 1.43 0.00 45.31 2.41
51 52 3.052036 CAATGGTGCAAAGTGCTACAAC 58.948 45.455 1.43 0.00 45.31 3.32
52 53 1.028905 TGGTGCAAAGTGCTACAACC 58.971 50.000 1.43 1.51 45.31 3.77
53 54 0.040425 GGTGCAAAGTGCTACAACCG 60.040 55.000 1.43 0.00 45.31 4.44
54 55 0.040425 GTGCAAAGTGCTACAACCGG 60.040 55.000 0.00 0.00 45.31 5.28
55 56 1.169661 TGCAAAGTGCTACAACCGGG 61.170 55.000 6.32 0.00 45.31 5.73
56 57 1.579429 CAAAGTGCTACAACCGGGC 59.421 57.895 6.32 0.00 0.00 6.13
57 58 1.149627 AAAGTGCTACAACCGGGCA 59.850 52.632 6.32 1.33 0.00 5.36
58 59 0.251165 AAAGTGCTACAACCGGGCAT 60.251 50.000 6.32 0.00 38.27 4.40
59 60 0.960364 AAGTGCTACAACCGGGCATG 60.960 55.000 6.32 4.28 38.27 4.06
60 61 2.045438 TGCTACAACCGGGCATGG 60.045 61.111 6.32 0.00 0.00 3.66
61 62 2.828549 GCTACAACCGGGCATGGG 60.829 66.667 6.32 1.09 0.00 4.00
62 63 2.674754 CTACAACCGGGCATGGGT 59.325 61.111 6.32 0.00 40.20 4.51
65 66 3.372730 CAACCGGGCATGGGTGTG 61.373 66.667 6.32 0.00 42.02 3.82
71 72 3.304721 GGCATGGGTGTGCTGCAA 61.305 61.111 2.77 0.00 44.45 4.08
72 73 2.048877 GCATGGGTGTGCTGCAAC 60.049 61.111 2.77 5.17 41.82 4.17
77 78 3.348236 GGTGTGCTGCAACCTCAG 58.652 61.111 19.82 0.00 37.15 3.35
78 79 1.227943 GGTGTGCTGCAACCTCAGA 60.228 57.895 19.82 0.00 36.19 3.27
79 80 0.607489 GGTGTGCTGCAACCTCAGAT 60.607 55.000 19.82 0.00 36.19 2.90
80 81 0.520404 GTGTGCTGCAACCTCAGATG 59.480 55.000 2.77 0.00 36.19 2.90
81 82 0.397564 TGTGCTGCAACCTCAGATGA 59.602 50.000 2.77 0.00 36.19 2.92
82 83 0.801251 GTGCTGCAACCTCAGATGAC 59.199 55.000 2.77 0.00 36.19 3.06
83 84 0.671472 TGCTGCAACCTCAGATGACG 60.671 55.000 0.00 0.00 36.19 4.35
84 85 0.390340 GCTGCAACCTCAGATGACGA 60.390 55.000 0.00 0.00 36.19 4.20
85 86 1.941209 GCTGCAACCTCAGATGACGAA 60.941 52.381 0.00 0.00 36.19 3.85
86 87 1.998315 CTGCAACCTCAGATGACGAAG 59.002 52.381 0.00 0.00 36.19 3.79
87 88 1.338105 TGCAACCTCAGATGACGAAGG 60.338 52.381 0.00 0.00 0.00 3.46
88 89 1.338200 GCAACCTCAGATGACGAAGGT 60.338 52.381 0.00 0.00 0.00 3.50
89 90 2.341257 CAACCTCAGATGACGAAGGTG 58.659 52.381 0.00 0.00 0.00 4.00
90 91 0.247736 ACCTCAGATGACGAAGGTGC 59.752 55.000 0.00 0.00 0.00 5.01
91 92 0.247460 CCTCAGATGACGAAGGTGCA 59.753 55.000 0.00 0.00 0.00 4.57
92 93 1.338105 CCTCAGATGACGAAGGTGCAA 60.338 52.381 0.00 0.00 0.00 4.08
93 94 2.416747 CTCAGATGACGAAGGTGCAAA 58.583 47.619 0.00 0.00 0.00 3.68
94 95 3.005554 CTCAGATGACGAAGGTGCAAAT 58.994 45.455 0.00 0.00 0.00 2.32
95 96 4.183865 CTCAGATGACGAAGGTGCAAATA 58.816 43.478 0.00 0.00 0.00 1.40
96 97 4.183865 TCAGATGACGAAGGTGCAAATAG 58.816 43.478 0.00 0.00 0.00 1.73
97 98 4.081697 TCAGATGACGAAGGTGCAAATAGA 60.082 41.667 0.00 0.00 0.00 1.98
98 99 4.631377 CAGATGACGAAGGTGCAAATAGAA 59.369 41.667 0.00 0.00 0.00 2.10
99 100 4.872691 AGATGACGAAGGTGCAAATAGAAG 59.127 41.667 0.00 0.00 0.00 2.85
100 101 4.002906 TGACGAAGGTGCAAATAGAAGT 57.997 40.909 0.00 0.00 0.00 3.01
101 102 3.994392 TGACGAAGGTGCAAATAGAAGTC 59.006 43.478 0.00 0.00 0.00 3.01
102 103 2.993899 ACGAAGGTGCAAATAGAAGTCG 59.006 45.455 0.00 0.00 0.00 4.18
103 104 3.250744 CGAAGGTGCAAATAGAAGTCGA 58.749 45.455 0.00 0.00 0.00 4.20
104 105 3.304559 CGAAGGTGCAAATAGAAGTCGAG 59.695 47.826 0.00 0.00 0.00 4.04
105 106 3.963428 AGGTGCAAATAGAAGTCGAGT 57.037 42.857 0.00 0.00 0.00 4.18
106 107 3.589988 AGGTGCAAATAGAAGTCGAGTG 58.410 45.455 0.00 0.00 0.00 3.51
107 108 2.673368 GGTGCAAATAGAAGTCGAGTGG 59.327 50.000 0.00 0.00 0.00 4.00
108 109 3.326747 GTGCAAATAGAAGTCGAGTGGT 58.673 45.455 0.00 0.00 0.00 4.16
109 110 3.746492 GTGCAAATAGAAGTCGAGTGGTT 59.254 43.478 0.00 0.00 0.00 3.67
110 111 4.213482 GTGCAAATAGAAGTCGAGTGGTTT 59.787 41.667 0.00 0.00 0.00 3.27
111 112 4.819630 TGCAAATAGAAGTCGAGTGGTTTT 59.180 37.500 0.00 0.00 0.00 2.43
112 113 5.298276 TGCAAATAGAAGTCGAGTGGTTTTT 59.702 36.000 0.00 0.00 0.00 1.94
113 114 5.625311 GCAAATAGAAGTCGAGTGGTTTTTG 59.375 40.000 0.00 4.35 0.00 2.44
114 115 6.512741 GCAAATAGAAGTCGAGTGGTTTTTGA 60.513 38.462 16.75 0.00 0.00 2.69
115 116 6.541111 AATAGAAGTCGAGTGGTTTTTGAC 57.459 37.500 0.00 0.00 0.00 3.18
116 117 2.864343 AGAAGTCGAGTGGTTTTTGACG 59.136 45.455 0.00 0.00 34.73 4.35
117 118 1.578583 AGTCGAGTGGTTTTTGACGG 58.421 50.000 0.00 0.00 34.73 4.79
118 119 1.137479 AGTCGAGTGGTTTTTGACGGA 59.863 47.619 0.00 0.00 34.73 4.69
119 120 1.525619 GTCGAGTGGTTTTTGACGGAG 59.474 52.381 0.00 0.00 0.00 4.63
120 121 1.409790 TCGAGTGGTTTTTGACGGAGA 59.590 47.619 0.00 0.00 0.00 3.71
121 122 1.792949 CGAGTGGTTTTTGACGGAGAG 59.207 52.381 0.00 0.00 0.00 3.20
122 123 2.143925 GAGTGGTTTTTGACGGAGAGG 58.856 52.381 0.00 0.00 0.00 3.69
123 124 1.766496 AGTGGTTTTTGACGGAGAGGA 59.234 47.619 0.00 0.00 0.00 3.71
124 125 1.871676 GTGGTTTTTGACGGAGAGGAC 59.128 52.381 0.00 0.00 0.00 3.85
125 126 1.145803 GGTTTTTGACGGAGAGGACG 58.854 55.000 0.00 0.00 37.36 4.79
126 127 1.145803 GTTTTTGACGGAGAGGACGG 58.854 55.000 0.00 0.00 35.23 4.79
127 128 0.754472 TTTTTGACGGAGAGGACGGT 59.246 50.000 0.00 0.00 35.23 4.83
128 129 0.032952 TTTTGACGGAGAGGACGGTG 59.967 55.000 0.00 0.00 35.23 4.94
129 130 2.430382 TTTGACGGAGAGGACGGTGC 62.430 60.000 0.00 0.00 35.23 5.01
130 131 3.063084 GACGGAGAGGACGGTGCT 61.063 66.667 0.31 0.31 35.23 4.40
131 132 2.600769 ACGGAGAGGACGGTGCTT 60.601 61.111 2.97 0.00 35.23 3.91
132 133 2.125912 CGGAGAGGACGGTGCTTG 60.126 66.667 2.97 0.00 0.00 4.01
133 134 2.932234 CGGAGAGGACGGTGCTTGT 61.932 63.158 2.97 0.00 0.00 3.16
134 135 1.374758 GGAGAGGACGGTGCTTGTG 60.375 63.158 2.97 0.00 0.00 3.33
135 136 2.029844 GAGAGGACGGTGCTTGTGC 61.030 63.158 2.97 0.00 40.20 4.57
136 137 3.050275 GAGGACGGTGCTTGTGCC 61.050 66.667 2.97 0.00 38.71 5.01
193 194 2.046892 CAGGTGGTGCTTCGAGGG 60.047 66.667 0.00 0.00 0.00 4.30
194 195 4.021925 AGGTGGTGCTTCGAGGGC 62.022 66.667 0.00 0.86 0.00 5.19
195 196 4.021925 GGTGGTGCTTCGAGGGCT 62.022 66.667 12.40 0.00 0.00 5.19
196 197 2.656069 GGTGGTGCTTCGAGGGCTA 61.656 63.158 12.40 0.00 0.00 3.93
197 198 1.522569 GTGGTGCTTCGAGGGCTAT 59.477 57.895 12.40 0.00 0.00 2.97
198 199 0.107654 GTGGTGCTTCGAGGGCTATT 60.108 55.000 12.40 0.00 0.00 1.73
199 200 0.107703 TGGTGCTTCGAGGGCTATTG 60.108 55.000 12.40 0.00 0.00 1.90
200 201 1.440145 GGTGCTTCGAGGGCTATTGC 61.440 60.000 12.40 0.00 38.76 3.56
201 202 0.462759 GTGCTTCGAGGGCTATTGCT 60.463 55.000 12.40 0.00 39.59 3.91
202 203 0.179073 TGCTTCGAGGGCTATTGCTC 60.179 55.000 12.40 0.00 40.76 4.26
203 204 0.882484 GCTTCGAGGGCTATTGCTCC 60.882 60.000 0.00 0.00 41.57 4.70
204 205 0.598680 CTTCGAGGGCTATTGCTCCG 60.599 60.000 0.00 0.00 41.57 4.63
205 206 2.644555 TTCGAGGGCTATTGCTCCGC 62.645 60.000 0.00 0.00 41.57 5.54
206 207 2.281139 GAGGGCTATTGCTCCGCC 60.281 66.667 0.00 0.00 41.57 6.13
209 210 4.547367 GGCTATTGCTCCGCCCGT 62.547 66.667 0.00 0.00 37.86 5.28
210 211 2.967615 GCTATTGCTCCGCCCGTC 60.968 66.667 0.00 0.00 36.03 4.79
211 212 2.280186 CTATTGCTCCGCCCGTCC 60.280 66.667 0.00 0.00 0.00 4.79
212 213 3.078196 TATTGCTCCGCCCGTCCA 61.078 61.111 0.00 0.00 0.00 4.02
213 214 2.383245 CTATTGCTCCGCCCGTCCAT 62.383 60.000 0.00 0.00 0.00 3.41
214 215 1.116536 TATTGCTCCGCCCGTCCATA 61.117 55.000 0.00 0.00 0.00 2.74
215 216 2.383245 ATTGCTCCGCCCGTCCATAG 62.383 60.000 0.00 0.00 0.00 2.23
216 217 4.971125 GCTCCGCCCGTCCATAGC 62.971 72.222 0.00 0.00 0.00 2.97
223 224 2.279517 CCGTCCATAGCGGCACTC 60.280 66.667 1.45 0.00 42.82 3.51
224 225 2.655364 CGTCCATAGCGGCACTCG 60.655 66.667 1.45 0.00 42.76 4.18
225 226 2.279517 GTCCATAGCGGCACTCGG 60.280 66.667 1.45 0.00 39.69 4.63
226 227 4.221422 TCCATAGCGGCACTCGGC 62.221 66.667 1.45 0.00 43.74 5.54
243 244 3.203442 CGGTGTTCGCTAGGGCTA 58.797 61.111 1.02 0.00 36.09 3.93
244 245 1.740285 CGGTGTTCGCTAGGGCTAT 59.260 57.895 1.02 0.00 36.09 2.97
245 246 0.318784 CGGTGTTCGCTAGGGCTATC 60.319 60.000 1.02 0.00 36.09 2.08
246 247 1.041437 GGTGTTCGCTAGGGCTATCT 58.959 55.000 1.02 0.00 36.09 1.98
247 248 1.269831 GGTGTTCGCTAGGGCTATCTG 60.270 57.143 1.02 0.00 36.09 2.90
248 249 0.389391 TGTTCGCTAGGGCTATCTGC 59.611 55.000 1.02 0.00 41.94 4.26
257 258 4.623814 GCTATCTGCCAGTGCACA 57.376 55.556 21.04 0.00 44.23 4.57
258 259 3.091318 GCTATCTGCCAGTGCACAT 57.909 52.632 21.04 4.90 44.23 3.21
259 260 0.942962 GCTATCTGCCAGTGCACATC 59.057 55.000 21.04 7.82 44.23 3.06
260 261 1.215244 CTATCTGCCAGTGCACATCG 58.785 55.000 21.04 6.79 44.23 3.84
261 262 0.536724 TATCTGCCAGTGCACATCGT 59.463 50.000 21.04 0.00 44.23 3.73
262 263 0.742281 ATCTGCCAGTGCACATCGTC 60.742 55.000 21.04 3.71 44.23 4.20
263 264 1.375140 CTGCCAGTGCACATCGTCT 60.375 57.895 21.04 0.00 44.23 4.18
264 265 1.632948 CTGCCAGTGCACATCGTCTG 61.633 60.000 21.04 7.09 44.23 3.51
265 266 1.374631 GCCAGTGCACATCGTCTGA 60.375 57.895 21.04 0.00 37.47 3.27
266 267 0.742281 GCCAGTGCACATCGTCTGAT 60.742 55.000 21.04 0.00 37.47 2.90
267 268 1.730501 CCAGTGCACATCGTCTGATT 58.269 50.000 21.04 0.00 30.49 2.57
268 269 2.079158 CCAGTGCACATCGTCTGATTT 58.921 47.619 21.04 0.00 30.49 2.17
269 270 2.485426 CCAGTGCACATCGTCTGATTTT 59.515 45.455 21.04 0.00 30.49 1.82
270 271 3.058016 CCAGTGCACATCGTCTGATTTTT 60.058 43.478 21.04 0.00 30.49 1.94
271 272 3.910170 CAGTGCACATCGTCTGATTTTTG 59.090 43.478 21.04 0.00 30.49 2.44
272 273 3.058016 AGTGCACATCGTCTGATTTTTGG 60.058 43.478 21.04 0.00 30.49 3.28
273 274 2.228582 TGCACATCGTCTGATTTTTGGG 59.771 45.455 0.00 0.00 30.49 4.12
274 275 2.415893 GCACATCGTCTGATTTTTGGGG 60.416 50.000 0.00 0.00 30.49 4.96
275 276 3.081061 CACATCGTCTGATTTTTGGGGA 58.919 45.455 0.00 0.00 30.49 4.81
276 277 3.696051 CACATCGTCTGATTTTTGGGGAT 59.304 43.478 0.00 0.00 30.49 3.85
277 278 3.947834 ACATCGTCTGATTTTTGGGGATC 59.052 43.478 0.00 0.00 30.49 3.36
278 279 2.999331 TCGTCTGATTTTTGGGGATCC 58.001 47.619 1.92 1.92 0.00 3.36
279 280 2.307392 TCGTCTGATTTTTGGGGATCCA 59.693 45.455 15.23 0.00 42.25 3.41
280 281 2.684881 CGTCTGATTTTTGGGGATCCAG 59.315 50.000 15.23 0.00 45.04 3.86
281 282 2.428530 GTCTGATTTTTGGGGATCCAGC 59.571 50.000 15.23 0.00 45.04 4.85
282 283 1.758862 CTGATTTTTGGGGATCCAGCC 59.241 52.381 15.23 7.12 45.04 4.85
283 284 1.362237 TGATTTTTGGGGATCCAGCCT 59.638 47.619 15.23 0.00 45.04 4.58
284 285 2.225598 TGATTTTTGGGGATCCAGCCTT 60.226 45.455 15.23 0.00 45.04 4.35
285 286 2.414250 TTTTTGGGGATCCAGCCTTT 57.586 45.000 15.23 0.00 45.04 3.11
286 287 1.643310 TTTTGGGGATCCAGCCTTTG 58.357 50.000 15.23 0.00 45.04 2.77
311 312 3.760035 GGAGCGACAGCCCTCGAA 61.760 66.667 4.86 0.00 46.67 3.71
312 313 2.261671 GAGCGACAGCCCTCGAAA 59.738 61.111 4.86 0.00 46.67 3.46
313 314 1.807573 GAGCGACAGCCCTCGAAAG 60.808 63.158 4.86 0.00 46.67 2.62
314 315 2.815647 GCGACAGCCCTCGAAAGG 60.816 66.667 4.86 0.00 42.95 3.11
321 322 4.865865 CCCTCGAAAGGCTGGATC 57.134 61.111 0.00 0.00 41.85 3.36
322 323 2.216148 CCCTCGAAAGGCTGGATCT 58.784 57.895 0.00 0.00 41.85 2.75
323 324 0.179062 CCCTCGAAAGGCTGGATCTG 60.179 60.000 0.00 0.00 41.85 2.90
324 325 0.826715 CCTCGAAAGGCTGGATCTGA 59.173 55.000 0.00 0.00 35.37 3.27
325 326 1.472376 CCTCGAAAGGCTGGATCTGAC 60.472 57.143 0.00 0.00 35.37 3.51
326 327 0.173481 TCGAAAGGCTGGATCTGACG 59.827 55.000 0.00 0.00 0.00 4.35
327 328 0.173481 CGAAAGGCTGGATCTGACGA 59.827 55.000 0.00 0.00 0.00 4.20
328 329 1.202463 CGAAAGGCTGGATCTGACGAT 60.202 52.381 0.00 0.00 0.00 3.73
329 330 2.739932 CGAAAGGCTGGATCTGACGATT 60.740 50.000 0.00 0.00 0.00 3.34
330 331 3.274288 GAAAGGCTGGATCTGACGATTT 58.726 45.455 0.00 0.00 0.00 2.17
331 332 2.322355 AGGCTGGATCTGACGATTTG 57.678 50.000 0.00 0.00 0.00 2.32
332 333 1.833630 AGGCTGGATCTGACGATTTGA 59.166 47.619 0.00 0.00 0.00 2.69
333 334 2.237143 AGGCTGGATCTGACGATTTGAA 59.763 45.455 0.00 0.00 0.00 2.69
334 335 2.611292 GGCTGGATCTGACGATTTGAAG 59.389 50.000 0.00 0.00 0.00 3.02
335 336 2.611292 GCTGGATCTGACGATTTGAAGG 59.389 50.000 0.00 0.00 0.00 3.46
336 337 3.866651 CTGGATCTGACGATTTGAAGGT 58.133 45.455 0.00 0.00 0.00 3.50
337 338 3.861840 TGGATCTGACGATTTGAAGGTC 58.138 45.455 0.00 0.00 0.00 3.85
338 339 2.860735 GGATCTGACGATTTGAAGGTCG 59.139 50.000 0.00 1.41 43.13 4.79
344 345 1.415374 CGATTTGAAGGTCGTGTCGT 58.585 50.000 0.00 0.00 33.42 4.34
345 346 2.587956 CGATTTGAAGGTCGTGTCGTA 58.412 47.619 0.00 0.00 33.42 3.43
346 347 3.176708 CGATTTGAAGGTCGTGTCGTAT 58.823 45.455 0.00 0.00 33.42 3.06
347 348 3.239941 CGATTTGAAGGTCGTGTCGTATC 59.760 47.826 0.00 0.00 33.42 2.24
348 349 3.928727 TTTGAAGGTCGTGTCGTATCT 57.071 42.857 0.00 0.00 0.00 1.98
349 350 5.571784 ATTTGAAGGTCGTGTCGTATCTA 57.428 39.130 0.00 0.00 0.00 1.98
350 351 5.375417 TTTGAAGGTCGTGTCGTATCTAA 57.625 39.130 0.00 0.00 0.00 2.10
351 352 4.346734 TGAAGGTCGTGTCGTATCTAAC 57.653 45.455 0.00 0.00 0.00 2.34
363 364 2.124903 GTATCTAACGGGTGACATGCG 58.875 52.381 0.00 0.00 0.00 4.73
364 365 0.821517 ATCTAACGGGTGACATGCGA 59.178 50.000 0.00 0.00 0.00 5.10
365 366 0.108992 TCTAACGGGTGACATGCGAC 60.109 55.000 0.00 0.00 0.00 5.19
366 367 1.079681 TAACGGGTGACATGCGACC 60.080 57.895 5.33 5.33 0.00 4.79
370 371 4.760047 GGTGACATGCGACCGGCT 62.760 66.667 0.00 0.00 44.05 5.52
371 372 3.490759 GTGACATGCGACCGGCTG 61.491 66.667 0.00 0.00 44.05 4.85
372 373 3.690280 TGACATGCGACCGGCTGA 61.690 61.111 0.00 0.00 44.05 4.26
373 374 2.887568 GACATGCGACCGGCTGAG 60.888 66.667 0.00 0.00 44.05 3.35
379 380 3.777925 CGACCGGCTGAGCGTTTG 61.778 66.667 0.00 0.00 0.00 2.93
380 381 3.423154 GACCGGCTGAGCGTTTGG 61.423 66.667 0.00 0.00 0.00 3.28
407 408 3.454375 CCTGTCGGCGTCTAAATTATGT 58.546 45.455 6.85 0.00 0.00 2.29
408 409 3.245284 CCTGTCGGCGTCTAAATTATGTG 59.755 47.826 6.85 0.00 0.00 3.21
409 410 4.109766 CTGTCGGCGTCTAAATTATGTGA 58.890 43.478 6.85 0.00 0.00 3.58
410 411 4.689071 TGTCGGCGTCTAAATTATGTGAT 58.311 39.130 6.85 0.00 0.00 3.06
411 412 4.506288 TGTCGGCGTCTAAATTATGTGATG 59.494 41.667 6.85 0.00 0.00 3.07
412 413 4.055360 TCGGCGTCTAAATTATGTGATGG 58.945 43.478 6.85 0.00 0.00 3.51
413 414 4.055360 CGGCGTCTAAATTATGTGATGGA 58.945 43.478 0.00 0.00 0.00 3.41
414 415 4.509970 CGGCGTCTAAATTATGTGATGGAA 59.490 41.667 0.00 0.00 0.00 3.53
415 416 5.007234 CGGCGTCTAAATTATGTGATGGAAA 59.993 40.000 0.00 0.00 0.00 3.13
416 417 6.293407 CGGCGTCTAAATTATGTGATGGAAAT 60.293 38.462 0.00 0.00 0.00 2.17
417 418 7.078228 GGCGTCTAAATTATGTGATGGAAATC 58.922 38.462 0.00 0.00 0.00 2.17
418 419 7.041098 GGCGTCTAAATTATGTGATGGAAATCT 60.041 37.037 0.00 0.00 0.00 2.40
419 420 8.345565 GCGTCTAAATTATGTGATGGAAATCTT 58.654 33.333 0.00 0.00 0.00 2.40
420 421 9.869844 CGTCTAAATTATGTGATGGAAATCTTC 57.130 33.333 0.00 0.00 0.00 2.87
465 466 9.906660 TGTTCAAACTTTCGCTCAAAATATAAT 57.093 25.926 0.00 0.00 0.00 1.28
474 475 5.639506 TCGCTCAAAATATAATAGAGCCTGC 59.360 40.000 0.00 0.00 46.65 4.85
484 485 2.225068 TAGAGCCTGCTAAATGCGAC 57.775 50.000 0.00 0.00 46.63 5.19
496 497 2.674796 AATGCGACCAGAGGAAGTAC 57.325 50.000 0.00 0.00 0.00 2.73
498 499 2.502142 TGCGACCAGAGGAAGTACTA 57.498 50.000 0.00 0.00 0.00 1.82
543 550 3.868369 GCATTCACCTGTTACACCTGCTA 60.868 47.826 0.00 0.00 0.00 3.49
544 551 3.678056 TTCACCTGTTACACCTGCTAG 57.322 47.619 0.00 0.00 0.00 3.42
581 624 3.243401 ACCACCGCTCATTCTTTTGTTTC 60.243 43.478 0.00 0.00 0.00 2.78
691 743 0.043637 ACGTATCCTTTCCCCCTCCA 59.956 55.000 0.00 0.00 0.00 3.86
724 776 3.398406 GAGTACGCCTCTACCTACTACC 58.602 54.545 0.00 0.00 37.22 3.18
725 777 3.044894 AGTACGCCTCTACCTACTACCT 58.955 50.000 0.00 0.00 0.00 3.08
726 778 4.227197 AGTACGCCTCTACCTACTACCTA 58.773 47.826 0.00 0.00 0.00 3.08
747 799 2.282110 CCAATGTCGTGTGGGCCA 60.282 61.111 0.00 0.00 0.00 5.36
797 849 0.251634 TGTCACGGGCATATCAAGCA 59.748 50.000 0.00 0.00 0.00 3.91
801 853 1.097547 ACGGGCATATCAAGCAGCAC 61.098 55.000 0.00 0.00 0.00 4.40
807 859 2.224606 CATATCAAGCAGCACGGGAAT 58.775 47.619 0.00 0.00 0.00 3.01
909 961 2.023181 CGCACTGCACACACACAC 59.977 61.111 1.11 0.00 0.00 3.82
910 962 2.748843 CGCACTGCACACACACACA 61.749 57.895 1.11 0.00 0.00 3.72
911 963 1.226379 GCACTGCACACACACACAC 60.226 57.895 0.00 0.00 0.00 3.82
912 964 1.921045 GCACTGCACACACACACACA 61.921 55.000 0.00 0.00 0.00 3.72
961 1015 0.326264 AGGCTCGCTCAAGATTTGGT 59.674 50.000 0.00 0.00 0.00 3.67
962 1016 1.168714 GGCTCGCTCAAGATTTGGTT 58.831 50.000 0.00 0.00 0.00 3.67
991 1045 3.364549 ACAGAACAGATCAGAGAGAGGG 58.635 50.000 0.00 0.00 0.00 4.30
1032 1086 4.470170 CCGGTGATCGTCGCGACA 62.470 66.667 35.71 23.77 39.18 4.35
1262 1320 0.813210 GAGCTCCTCCGCTGGATTTG 60.813 60.000 0.87 0.00 41.08 2.32
1351 1413 6.418523 GTGGTATGGTTTTAAACTTGGTTTCG 59.581 38.462 7.79 0.00 37.01 3.46
1410 1476 4.552276 CGTGTTGCGGTATACTCGTATATG 59.448 45.833 13.06 5.59 36.85 1.78
1440 1506 5.470777 TGGATTGAAAATTCGAGTACGGTTT 59.529 36.000 0.00 0.00 40.21 3.27
1458 1526 4.327627 CGGTTTGATTGGTCGTTTGTTTTT 59.672 37.500 0.00 0.00 0.00 1.94
1469 1537 2.781646 CGTTTGTTTTTGCCTTCGAGTC 59.218 45.455 0.00 0.00 0.00 3.36
1479 1547 0.314302 CCTTCGAGTCGTTCAGGTGT 59.686 55.000 13.12 0.00 0.00 4.16
1513 1581 3.770666 TCGATTACGCTTCAAAGAGGAG 58.229 45.455 0.00 0.00 39.58 3.69
1517 1585 5.613358 ATTACGCTTCAAAGAGGAGTTTG 57.387 39.130 0.00 0.00 38.55 2.93
1536 1604 9.434559 GGAGTTTGAGAATATATAAAACGTTGC 57.565 33.333 0.00 0.00 36.19 4.17
1540 1608 8.725405 TTGAGAATATATAAAACGTTGCCTCA 57.275 30.769 0.00 2.17 0.00 3.86
1542 1610 8.609176 TGAGAATATATAAAACGTTGCCTCAAC 58.391 33.333 0.00 0.00 40.54 3.18
1544 1612 9.174166 AGAATATATAAAACGTTGCCTCAACTT 57.826 29.630 0.00 0.00 41.62 2.66
1670 1745 3.651803 TTTGGAAACACATTTAGGCCG 57.348 42.857 0.00 0.00 42.67 6.13
1671 1746 0.885196 TGGAAACACATTTAGGCCGC 59.115 50.000 0.00 0.00 33.40 6.53
1673 1748 0.519961 GAAACACATTTAGGCCGCGT 59.480 50.000 4.92 0.00 0.00 6.01
1683 1758 1.928706 TAGGCCGCGTTTGATTTGCC 61.929 55.000 4.92 8.12 39.17 4.52
1688 1763 1.083489 CGCGTTTGATTTGCCTAGGA 58.917 50.000 14.75 0.00 0.00 2.94
1716 1798 7.257790 TCTGTAGATCCTCTGGAAATTTTCA 57.742 36.000 11.09 0.00 34.34 2.69
1721 1803 3.684908 TCCTCTGGAAATTTTCATGCGA 58.315 40.909 11.09 0.00 0.00 5.10
1741 1824 4.034048 GCGATGTCGTTTGATTTACAGGAT 59.966 41.667 4.20 0.00 42.22 3.24
1742 1825 5.447279 GCGATGTCGTTTGATTTACAGGATT 60.447 40.000 4.20 0.00 42.22 3.01
1743 1826 5.959527 CGATGTCGTTTGATTTACAGGATTG 59.040 40.000 0.00 0.00 34.11 2.67
1744 1827 6.402118 CGATGTCGTTTGATTTACAGGATTGT 60.402 38.462 0.00 0.00 36.61 2.71
1745 1828 5.996219 TGTCGTTTGATTTACAGGATTGTG 58.004 37.500 0.00 0.00 38.23 3.33
1746 1829 5.529430 TGTCGTTTGATTTACAGGATTGTGT 59.471 36.000 0.00 0.00 38.23 3.72
1747 1830 6.038825 TGTCGTTTGATTTACAGGATTGTGTT 59.961 34.615 0.00 0.00 38.23 3.32
1748 1831 6.577427 GTCGTTTGATTTACAGGATTGTGTTC 59.423 38.462 0.00 0.00 38.23 3.18
1749 1832 5.856455 CGTTTGATTTACAGGATTGTGTTCC 59.144 40.000 0.00 0.00 38.23 3.62
1750 1833 6.514212 CGTTTGATTTACAGGATTGTGTTCCA 60.514 38.462 0.00 0.00 38.23 3.53
1751 1834 5.957842 TGATTTACAGGATTGTGTTCCAC 57.042 39.130 0.00 0.00 38.23 4.02
1752 1835 4.764823 TGATTTACAGGATTGTGTTCCACC 59.235 41.667 0.00 0.00 38.23 4.61
1753 1836 2.465860 TACAGGATTGTGTTCCACCG 57.534 50.000 0.00 0.00 38.23 4.94
1754 1837 0.762418 ACAGGATTGTGTTCCACCGA 59.238 50.000 0.00 0.00 38.32 4.69
1755 1838 1.142060 ACAGGATTGTGTTCCACCGAA 59.858 47.619 0.00 0.00 38.32 4.30
1756 1839 2.226330 CAGGATTGTGTTCCACCGAAA 58.774 47.619 0.00 0.00 38.32 3.46
1757 1840 2.031157 CAGGATTGTGTTCCACCGAAAC 60.031 50.000 0.00 0.00 38.32 2.78
1758 1841 1.268625 GGATTGTGTTCCACCGAAACC 59.731 52.381 0.00 0.00 35.72 3.27
1759 1842 1.950909 GATTGTGTTCCACCGAAACCA 59.049 47.619 0.00 0.00 32.73 3.67
1760 1843 1.835494 TTGTGTTCCACCGAAACCAA 58.165 45.000 0.00 0.00 32.73 3.67
1761 1844 2.060050 TGTGTTCCACCGAAACCAAT 57.940 45.000 0.00 0.00 32.73 3.16
1762 1845 1.950909 TGTGTTCCACCGAAACCAATC 59.049 47.619 0.00 0.00 32.73 2.67
1763 1846 1.069500 GTGTTCCACCGAAACCAATCG 60.069 52.381 0.00 0.00 42.37 3.34
1764 1847 1.232119 GTTCCACCGAAACCAATCGT 58.768 50.000 0.00 0.00 41.16 3.73
1765 1848 2.224233 TGTTCCACCGAAACCAATCGTA 60.224 45.455 0.00 0.00 41.16 3.43
1766 1849 2.807392 GTTCCACCGAAACCAATCGTAA 59.193 45.455 0.00 0.00 41.16 3.18
1767 1850 3.123157 TCCACCGAAACCAATCGTAAA 57.877 42.857 0.00 0.00 41.16 2.01
1768 1851 3.677190 TCCACCGAAACCAATCGTAAAT 58.323 40.909 0.00 0.00 41.16 1.40
1769 1852 4.829968 TCCACCGAAACCAATCGTAAATA 58.170 39.130 0.00 0.00 41.16 1.40
1770 1853 5.243981 TCCACCGAAACCAATCGTAAATAA 58.756 37.500 0.00 0.00 41.16 1.40
1771 1854 5.704515 TCCACCGAAACCAATCGTAAATAAA 59.295 36.000 0.00 0.00 41.16 1.40
1772 1855 6.206243 TCCACCGAAACCAATCGTAAATAAAA 59.794 34.615 0.00 0.00 41.16 1.52
1773 1856 7.030768 CCACCGAAACCAATCGTAAATAAAAT 58.969 34.615 0.00 0.00 41.16 1.82
1774 1857 7.219344 CCACCGAAACCAATCGTAAATAAAATC 59.781 37.037 0.00 0.00 41.16 2.17
1775 1858 7.219344 CACCGAAACCAATCGTAAATAAAATCC 59.781 37.037 0.00 0.00 41.16 3.01
1776 1859 7.094291 ACCGAAACCAATCGTAAATAAAATCCA 60.094 33.333 0.00 0.00 41.16 3.41
1777 1860 7.918562 CCGAAACCAATCGTAAATAAAATCCAT 59.081 33.333 0.00 0.00 41.16 3.41
1778 1861 9.938670 CGAAACCAATCGTAAATAAAATCCATA 57.061 29.630 0.00 0.00 38.01 2.74
1793 1876 9.739276 ATAAAATCCATAGTTCAGTTTCACAGA 57.261 29.630 0.00 0.00 0.00 3.41
1794 1877 8.463930 AAAATCCATAGTTCAGTTTCACAGAA 57.536 30.769 0.00 0.00 0.00 3.02
1795 1878 8.463930 AAATCCATAGTTCAGTTTCACAGAAA 57.536 30.769 0.00 0.00 0.00 2.52
1796 1879 8.463930 AATCCATAGTTCAGTTTCACAGAAAA 57.536 30.769 0.00 0.00 0.00 2.29
1797 1880 7.873719 TCCATAGTTCAGTTTCACAGAAAAA 57.126 32.000 0.00 0.00 0.00 1.94
1798 1881 7.930217 TCCATAGTTCAGTTTCACAGAAAAAG 58.070 34.615 0.00 0.00 0.00 2.27
1799 1882 7.013274 TCCATAGTTCAGTTTCACAGAAAAAGG 59.987 37.037 0.00 0.00 0.00 3.11
1800 1883 4.998788 AGTTCAGTTTCACAGAAAAAGGC 58.001 39.130 0.00 0.00 0.00 4.35
1801 1884 4.462483 AGTTCAGTTTCACAGAAAAAGGCA 59.538 37.500 0.00 0.00 0.00 4.75
1802 1885 5.047377 AGTTCAGTTTCACAGAAAAAGGCAA 60.047 36.000 0.00 0.00 0.00 4.52
1803 1886 5.596836 TCAGTTTCACAGAAAAAGGCAAT 57.403 34.783 0.00 0.00 0.00 3.56
1804 1887 5.350633 TCAGTTTCACAGAAAAAGGCAATG 58.649 37.500 0.00 0.00 0.00 2.82
1805 1888 5.126869 TCAGTTTCACAGAAAAAGGCAATGA 59.873 36.000 0.00 0.00 0.00 2.57
1806 1889 5.461078 CAGTTTCACAGAAAAAGGCAATGAG 59.539 40.000 0.00 0.00 0.00 2.90
1807 1890 4.589216 TTCACAGAAAAAGGCAATGAGG 57.411 40.909 0.00 0.00 0.00 3.86
1808 1891 3.831323 TCACAGAAAAAGGCAATGAGGA 58.169 40.909 0.00 0.00 0.00 3.71
1809 1892 3.569701 TCACAGAAAAAGGCAATGAGGAC 59.430 43.478 0.00 0.00 0.00 3.85
1810 1893 3.571401 CACAGAAAAAGGCAATGAGGACT 59.429 43.478 0.00 0.00 0.00 3.85
1811 1894 4.038402 CACAGAAAAAGGCAATGAGGACTT 59.962 41.667 0.00 0.00 37.88 3.01
1812 1895 4.279420 ACAGAAAAAGGCAATGAGGACTTC 59.721 41.667 0.00 0.00 34.20 3.01
1813 1896 4.279169 CAGAAAAAGGCAATGAGGACTTCA 59.721 41.667 0.00 0.00 34.20 3.02
1815 1898 4.796038 AAAAGGCAATGAGGACTTCATG 57.204 40.909 0.11 0.00 45.82 3.07
1816 1899 2.431954 AGGCAATGAGGACTTCATGG 57.568 50.000 0.11 0.00 45.82 3.66
1817 1900 1.918262 AGGCAATGAGGACTTCATGGA 59.082 47.619 6.13 0.00 45.82 3.41
1818 1901 2.309755 AGGCAATGAGGACTTCATGGAA 59.690 45.455 6.13 0.00 45.82 3.53
1819 1902 3.091545 GGCAATGAGGACTTCATGGAAA 58.908 45.455 6.13 0.00 45.82 3.13
1820 1903 3.511146 GGCAATGAGGACTTCATGGAAAA 59.489 43.478 6.13 0.00 45.82 2.29
1821 1904 4.021192 GGCAATGAGGACTTCATGGAAAAA 60.021 41.667 6.13 0.00 45.82 1.94
1822 1905 5.337813 GGCAATGAGGACTTCATGGAAAAAT 60.338 40.000 6.13 0.00 45.82 1.82
1823 1906 5.809051 GCAATGAGGACTTCATGGAAAAATC 59.191 40.000 6.13 0.00 45.82 2.17
1824 1907 6.335777 CAATGAGGACTTCATGGAAAAATCC 58.664 40.000 0.11 0.00 45.82 3.01
1825 1908 5.261040 TGAGGACTTCATGGAAAAATCCT 57.739 39.130 0.00 0.00 33.78 3.24
1826 1909 6.387192 TGAGGACTTCATGGAAAAATCCTA 57.613 37.500 0.00 0.00 32.31 2.94
1827 1910 6.418101 TGAGGACTTCATGGAAAAATCCTAG 58.582 40.000 0.00 0.00 32.31 3.02
1828 1911 5.196695 AGGACTTCATGGAAAAATCCTAGC 58.803 41.667 0.00 0.00 31.18 3.42
1829 1912 4.035675 GGACTTCATGGAAAAATCCTAGCG 59.964 45.833 0.00 0.00 0.00 4.26
1830 1913 3.947834 ACTTCATGGAAAAATCCTAGCGG 59.052 43.478 0.00 0.00 0.00 5.52
1831 1914 2.930950 TCATGGAAAAATCCTAGCGGG 58.069 47.619 0.00 0.00 0.00 6.13
1841 1924 2.038387 TCCTAGCGGGAAGAAAATGC 57.962 50.000 0.00 0.00 41.91 3.56
1842 1925 0.657840 CCTAGCGGGAAGAAAATGCG 59.342 55.000 0.00 0.00 37.23 4.73
1843 1926 0.028110 CTAGCGGGAAGAAAATGCGC 59.972 55.000 0.00 0.00 0.00 6.09
1844 1927 0.675208 TAGCGGGAAGAAAATGCGCA 60.675 50.000 14.96 14.96 0.00 6.09
1845 1928 1.801512 GCGGGAAGAAAATGCGCAC 60.802 57.895 14.90 0.00 0.00 5.34
1846 1929 1.511887 CGGGAAGAAAATGCGCACG 60.512 57.895 14.90 4.16 0.00 5.34
1847 1930 1.801512 GGGAAGAAAATGCGCACGC 60.802 57.895 14.90 8.33 42.35 5.34
1857 1940 3.121030 GCGCACGCATGAGTTCCT 61.121 61.111 10.65 0.00 41.49 3.36
1858 1941 1.809619 GCGCACGCATGAGTTCCTA 60.810 57.895 10.65 0.00 41.49 2.94
1859 1942 1.154205 GCGCACGCATGAGTTCCTAT 61.154 55.000 10.65 0.00 41.49 2.57
1860 1943 0.578683 CGCACGCATGAGTTCCTATG 59.421 55.000 0.00 0.00 0.00 2.23
1861 1944 1.656652 GCACGCATGAGTTCCTATGT 58.343 50.000 0.00 0.00 0.00 2.29
1862 1945 2.009774 GCACGCATGAGTTCCTATGTT 58.990 47.619 0.00 0.00 0.00 2.71
1863 1946 2.420022 GCACGCATGAGTTCCTATGTTT 59.580 45.455 0.00 0.00 0.00 2.83
1864 1947 3.119849 GCACGCATGAGTTCCTATGTTTT 60.120 43.478 0.00 0.00 0.00 2.43
1865 1948 4.615912 GCACGCATGAGTTCCTATGTTTTT 60.616 41.667 0.00 0.00 0.00 1.94
1896 1979 9.539825 ACTAGAATCAAATAGCAGTTATGTGAG 57.460 33.333 0.00 0.00 38.96 3.51
1897 1980 9.755804 CTAGAATCAAATAGCAGTTATGTGAGA 57.244 33.333 3.73 0.00 38.96 3.27
1899 1982 9.624373 AGAATCAAATAGCAGTTATGTGAGAAT 57.376 29.630 3.73 0.00 38.96 2.40
1902 1985 8.213518 TCAAATAGCAGTTATGTGAGAATTCC 57.786 34.615 0.65 0.00 32.19 3.01
1903 1986 8.049117 TCAAATAGCAGTTATGTGAGAATTCCT 58.951 33.333 0.65 0.00 32.19 3.36
1904 1987 9.330063 CAAATAGCAGTTATGTGAGAATTCCTA 57.670 33.333 0.65 0.00 29.66 2.94
1906 1989 9.499479 AATAGCAGTTATGTGAGAATTCCTATG 57.501 33.333 0.65 0.00 0.00 2.23
1907 1990 6.893583 AGCAGTTATGTGAGAATTCCTATGT 58.106 36.000 0.65 0.00 0.00 2.29
1908 1991 7.341805 AGCAGTTATGTGAGAATTCCTATGTT 58.658 34.615 0.65 0.00 0.00 2.71
1909 1992 7.831193 AGCAGTTATGTGAGAATTCCTATGTTT 59.169 33.333 0.65 0.00 0.00 2.83
1910 1993 8.462016 GCAGTTATGTGAGAATTCCTATGTTTT 58.538 33.333 0.65 0.00 0.00 2.43
1911 1994 9.778993 CAGTTATGTGAGAATTCCTATGTTTTG 57.221 33.333 0.65 0.00 0.00 2.44
1912 1995 8.462016 AGTTATGTGAGAATTCCTATGTTTTGC 58.538 33.333 0.65 0.00 0.00 3.68
1913 1996 8.462016 GTTATGTGAGAATTCCTATGTTTTGCT 58.538 33.333 0.65 0.00 0.00 3.91
1914 1997 9.679661 TTATGTGAGAATTCCTATGTTTTGCTA 57.320 29.630 0.65 0.00 0.00 3.49
1915 1998 8.757982 ATGTGAGAATTCCTATGTTTTGCTAT 57.242 30.769 0.65 0.00 0.00 2.97
1916 1999 8.213518 TGTGAGAATTCCTATGTTTTGCTATC 57.786 34.615 0.65 0.00 0.00 2.08
1917 2000 7.011389 TGTGAGAATTCCTATGTTTTGCTATCG 59.989 37.037 0.65 0.00 0.00 2.92
1918 2001 6.483307 TGAGAATTCCTATGTTTTGCTATCGG 59.517 38.462 0.65 0.00 0.00 4.18
1919 2002 6.357367 AGAATTCCTATGTTTTGCTATCGGT 58.643 36.000 0.65 0.00 0.00 4.69
1920 2003 6.260936 AGAATTCCTATGTTTTGCTATCGGTG 59.739 38.462 0.65 0.00 0.00 4.94
1921 2004 3.804036 TCCTATGTTTTGCTATCGGTGG 58.196 45.455 0.00 0.00 0.00 4.61
1922 2005 2.878406 CCTATGTTTTGCTATCGGTGGG 59.122 50.000 0.00 0.00 0.00 4.61
1923 2006 2.799126 ATGTTTTGCTATCGGTGGGA 57.201 45.000 0.00 0.00 0.00 4.37
1924 2007 2.799126 TGTTTTGCTATCGGTGGGAT 57.201 45.000 0.00 0.00 39.25 3.85
1925 2008 3.080300 TGTTTTGCTATCGGTGGGATT 57.920 42.857 0.00 0.00 36.55 3.01
1926 2009 3.426615 TGTTTTGCTATCGGTGGGATTT 58.573 40.909 0.00 0.00 36.55 2.17
1927 2010 3.442273 TGTTTTGCTATCGGTGGGATTTC 59.558 43.478 0.00 0.00 36.55 2.17
1928 2011 3.358111 TTTGCTATCGGTGGGATTTCA 57.642 42.857 0.00 0.00 36.55 2.69
1929 2012 2.325583 TGCTATCGGTGGGATTTCAC 57.674 50.000 0.00 0.00 36.55 3.18
1930 2013 1.837439 TGCTATCGGTGGGATTTCACT 59.163 47.619 0.00 0.00 37.75 3.41
1931 2014 2.238646 TGCTATCGGTGGGATTTCACTT 59.761 45.455 0.00 0.00 37.75 3.16
1932 2015 2.614057 GCTATCGGTGGGATTTCACTTG 59.386 50.000 0.00 0.00 37.75 3.16
1933 2016 3.681594 GCTATCGGTGGGATTTCACTTGA 60.682 47.826 0.00 0.00 37.75 3.02
1934 2017 2.178912 TCGGTGGGATTTCACTTGAC 57.821 50.000 0.00 0.00 37.75 3.18
1935 2018 1.418264 TCGGTGGGATTTCACTTGACA 59.582 47.619 0.00 0.00 37.75 3.58
1936 2019 1.535462 CGGTGGGATTTCACTTGACAC 59.465 52.381 0.00 0.00 37.75 3.67
1937 2020 1.535462 GGTGGGATTTCACTTGACACG 59.465 52.381 0.00 0.00 37.75 4.49
1938 2021 1.535462 GTGGGATTTCACTTGACACGG 59.465 52.381 0.00 0.00 34.98 4.94
1939 2022 0.521735 GGGATTTCACTTGACACGGC 59.478 55.000 0.00 0.00 0.00 5.68
1940 2023 1.234821 GGATTTCACTTGACACGGCA 58.765 50.000 0.00 0.00 0.00 5.69
1941 2024 1.812571 GGATTTCACTTGACACGGCAT 59.187 47.619 0.00 0.00 0.00 4.40
1942 2025 2.159517 GGATTTCACTTGACACGGCATC 60.160 50.000 0.00 0.00 0.00 3.91
1943 2026 1.234821 TTTCACTTGACACGGCATCC 58.765 50.000 0.00 0.00 0.00 3.51
1944 2027 0.396435 TTCACTTGACACGGCATCCT 59.604 50.000 0.00 0.00 0.00 3.24
1945 2028 1.262417 TCACTTGACACGGCATCCTA 58.738 50.000 0.00 0.00 0.00 2.94
1946 2029 1.831106 TCACTTGACACGGCATCCTAT 59.169 47.619 0.00 0.00 0.00 2.57
1947 2030 2.159099 TCACTTGACACGGCATCCTATC 60.159 50.000 0.00 0.00 0.00 2.08
1948 2031 2.111384 ACTTGACACGGCATCCTATCT 58.889 47.619 0.00 0.00 0.00 1.98
1949 2032 2.159043 ACTTGACACGGCATCCTATCTG 60.159 50.000 0.00 0.00 0.00 2.90
1950 2033 1.485124 TGACACGGCATCCTATCTGT 58.515 50.000 0.00 0.00 0.00 3.41
1951 2034 2.661718 TGACACGGCATCCTATCTGTA 58.338 47.619 0.00 0.00 0.00 2.74
1952 2035 2.623416 TGACACGGCATCCTATCTGTAG 59.377 50.000 0.00 0.00 0.00 2.74
1953 2036 2.623889 GACACGGCATCCTATCTGTAGT 59.376 50.000 0.00 0.00 0.00 2.73
1954 2037 3.031736 ACACGGCATCCTATCTGTAGTT 58.968 45.455 0.00 0.00 0.00 2.24
1955 2038 3.068307 ACACGGCATCCTATCTGTAGTTC 59.932 47.826 0.00 0.00 0.00 3.01
1956 2039 3.068165 CACGGCATCCTATCTGTAGTTCA 59.932 47.826 0.00 0.00 0.00 3.18
1957 2040 3.898123 ACGGCATCCTATCTGTAGTTCAT 59.102 43.478 0.00 0.00 0.00 2.57
1958 2041 4.345257 ACGGCATCCTATCTGTAGTTCATT 59.655 41.667 0.00 0.00 0.00 2.57
1959 2042 5.163301 ACGGCATCCTATCTGTAGTTCATTT 60.163 40.000 0.00 0.00 0.00 2.32
1960 2043 5.760253 CGGCATCCTATCTGTAGTTCATTTT 59.240 40.000 0.00 0.00 0.00 1.82
1961 2044 6.260936 CGGCATCCTATCTGTAGTTCATTTTT 59.739 38.462 0.00 0.00 0.00 1.94
1962 2045 7.519008 CGGCATCCTATCTGTAGTTCATTTTTC 60.519 40.741 0.00 0.00 0.00 2.29
1963 2046 7.255277 GGCATCCTATCTGTAGTTCATTTTTCC 60.255 40.741 0.00 0.00 0.00 3.13
1964 2047 7.500559 GCATCCTATCTGTAGTTCATTTTTCCT 59.499 37.037 0.00 0.00 0.00 3.36
1965 2048 8.834465 CATCCTATCTGTAGTTCATTTTTCCTG 58.166 37.037 0.00 0.00 0.00 3.86
1966 2049 7.918076 TCCTATCTGTAGTTCATTTTTCCTGT 58.082 34.615 0.00 0.00 0.00 4.00
1967 2050 8.383175 TCCTATCTGTAGTTCATTTTTCCTGTT 58.617 33.333 0.00 0.00 0.00 3.16
1968 2051 9.014297 CCTATCTGTAGTTCATTTTTCCTGTTT 57.986 33.333 0.00 0.00 0.00 2.83
1970 2053 8.697507 ATCTGTAGTTCATTTTTCCTGTTTCT 57.302 30.769 0.00 0.00 0.00 2.52
1971 2054 9.793259 ATCTGTAGTTCATTTTTCCTGTTTCTA 57.207 29.630 0.00 0.00 0.00 2.10
1972 2055 9.052759 TCTGTAGTTCATTTTTCCTGTTTCTAC 57.947 33.333 0.00 0.00 0.00 2.59
1973 2056 8.740123 TGTAGTTCATTTTTCCTGTTTCTACA 57.260 30.769 0.00 0.00 34.03 2.74
1974 2057 8.617809 TGTAGTTCATTTTTCCTGTTTCTACAC 58.382 33.333 0.00 0.00 32.34 2.90
1975 2058 7.881775 AGTTCATTTTTCCTGTTTCTACACT 57.118 32.000 0.00 0.00 0.00 3.55
1976 2059 8.293699 AGTTCATTTTTCCTGTTTCTACACTT 57.706 30.769 0.00 0.00 0.00 3.16
1977 2060 9.403583 AGTTCATTTTTCCTGTTTCTACACTTA 57.596 29.630 0.00 0.00 0.00 2.24
1982 2065 9.802039 ATTTTTCCTGTTTCTACACTTATACCA 57.198 29.630 0.00 0.00 0.00 3.25
1983 2066 9.629878 TTTTTCCTGTTTCTACACTTATACCAA 57.370 29.630 0.00 0.00 0.00 3.67
1984 2067 9.802039 TTTTCCTGTTTCTACACTTATACCAAT 57.198 29.630 0.00 0.00 0.00 3.16
1985 2068 9.444600 TTTCCTGTTTCTACACTTATACCAATC 57.555 33.333 0.00 0.00 0.00 2.67
1986 2069 7.562135 TCCTGTTTCTACACTTATACCAATCC 58.438 38.462 0.00 0.00 0.00 3.01
1987 2070 7.402071 TCCTGTTTCTACACTTATACCAATCCT 59.598 37.037 0.00 0.00 0.00 3.24
1988 2071 7.495934 CCTGTTTCTACACTTATACCAATCCTG 59.504 40.741 0.00 0.00 0.00 3.86
1989 2072 7.913789 TGTTTCTACACTTATACCAATCCTGT 58.086 34.615 0.00 0.00 0.00 4.00
1990 2073 9.038072 TGTTTCTACACTTATACCAATCCTGTA 57.962 33.333 0.00 0.00 0.00 2.74
1991 2074 9.880157 GTTTCTACACTTATACCAATCCTGTAA 57.120 33.333 0.00 0.00 0.00 2.41
1994 2077 9.880157 TCTACACTTATACCAATCCTGTAAAAC 57.120 33.333 0.00 0.00 0.00 2.43
1995 2078 9.661563 CTACACTTATACCAATCCTGTAAAACA 57.338 33.333 0.00 0.00 0.00 2.83
1996 2079 8.927675 ACACTTATACCAATCCTGTAAAACAA 57.072 30.769 0.00 0.00 0.00 2.83
1997 2080 9.357161 ACACTTATACCAATCCTGTAAAACAAA 57.643 29.630 0.00 0.00 0.00 2.83
2002 2085 6.345096 ACCAATCCTGTAAAACAAATGAGG 57.655 37.500 0.00 0.00 0.00 3.86
2003 2086 5.170748 CCAATCCTGTAAAACAAATGAGGC 58.829 41.667 0.00 0.00 0.00 4.70
2004 2087 5.170748 CAATCCTGTAAAACAAATGAGGCC 58.829 41.667 0.00 0.00 0.00 5.19
2005 2088 4.112634 TCCTGTAAAACAAATGAGGCCT 57.887 40.909 3.86 3.86 0.00 5.19
2006 2089 4.479158 TCCTGTAAAACAAATGAGGCCTT 58.521 39.130 6.77 0.00 0.00 4.35
2007 2090 5.636123 TCCTGTAAAACAAATGAGGCCTTA 58.364 37.500 6.77 1.66 0.00 2.69
2008 2091 5.710099 TCCTGTAAAACAAATGAGGCCTTAG 59.290 40.000 6.77 0.00 0.00 2.18
2009 2092 5.105756 CCTGTAAAACAAATGAGGCCTTAGG 60.106 44.000 6.77 0.00 0.00 2.69
2022 2105 3.577649 GCCTTAGGCTTCTTTTGGTTC 57.422 47.619 17.16 0.00 46.69 3.62
2023 2106 2.890945 GCCTTAGGCTTCTTTTGGTTCA 59.109 45.455 17.16 0.00 46.69 3.18
2024 2107 3.511540 GCCTTAGGCTTCTTTTGGTTCAT 59.488 43.478 17.16 0.00 46.69 2.57
2025 2108 4.705023 GCCTTAGGCTTCTTTTGGTTCATA 59.295 41.667 17.16 0.00 46.69 2.15
2026 2109 5.163612 GCCTTAGGCTTCTTTTGGTTCATAG 60.164 44.000 17.16 0.00 46.69 2.23
2027 2110 5.358160 CCTTAGGCTTCTTTTGGTTCATAGG 59.642 44.000 0.00 0.00 0.00 2.57
2028 2111 4.657814 AGGCTTCTTTTGGTTCATAGGA 57.342 40.909 0.00 0.00 0.00 2.94
2029 2112 5.198602 AGGCTTCTTTTGGTTCATAGGAT 57.801 39.130 0.00 0.00 0.00 3.24
2030 2113 6.327386 AGGCTTCTTTTGGTTCATAGGATA 57.673 37.500 0.00 0.00 0.00 2.59
2031 2114 6.360618 AGGCTTCTTTTGGTTCATAGGATAG 58.639 40.000 0.00 0.00 0.00 2.08
2032 2115 5.532779 GGCTTCTTTTGGTTCATAGGATAGG 59.467 44.000 0.00 0.00 0.00 2.57
2033 2116 6.357367 GCTTCTTTTGGTTCATAGGATAGGA 58.643 40.000 0.00 0.00 0.00 2.94
2034 2117 7.001073 GCTTCTTTTGGTTCATAGGATAGGAT 58.999 38.462 0.00 0.00 28.27 3.24
2035 2118 7.503902 GCTTCTTTTGGTTCATAGGATAGGATT 59.496 37.037 0.00 0.00 28.27 3.01
2039 2122 9.155975 CTTTTGGTTCATAGGATAGGATTATCG 57.844 37.037 0.00 0.00 37.20 2.92
2040 2123 7.792364 TTGGTTCATAGGATAGGATTATCGT 57.208 36.000 0.00 0.00 37.20 3.73
2041 2124 8.888836 TTGGTTCATAGGATAGGATTATCGTA 57.111 34.615 0.00 0.00 39.58 3.43
2042 2125 8.521170 TGGTTCATAGGATAGGATTATCGTAG 57.479 38.462 1.23 0.00 39.00 3.51
2043 2126 7.560262 TGGTTCATAGGATAGGATTATCGTAGG 59.440 40.741 1.23 3.78 39.00 3.18
2044 2127 7.778853 GGTTCATAGGATAGGATTATCGTAGGA 59.221 40.741 7.24 7.24 41.67 2.94
2045 2128 9.186837 GTTCATAGGATAGGATTATCGTAGGAA 57.813 37.037 14.87 14.87 45.40 3.36
2046 2129 9.937876 TTCATAGGATAGGATTATCGTAGGAAT 57.062 33.333 14.87 0.00 44.20 3.01
2050 2133 8.115490 AGGATAGGATTATCGTAGGAATAGGA 57.885 38.462 1.23 0.00 37.20 2.94
2051 2134 8.566979 AGGATAGGATTATCGTAGGAATAGGAA 58.433 37.037 1.23 0.00 37.20 3.36
2052 2135 9.369672 GGATAGGATTATCGTAGGAATAGGAAT 57.630 37.037 1.23 0.00 37.20 3.01
2056 2139 9.726438 AGGATTATCGTAGGAATAGGAATTTTG 57.274 33.333 0.00 0.00 0.00 2.44
2057 2140 9.503399 GGATTATCGTAGGAATAGGAATTTTGT 57.497 33.333 0.00 0.00 0.00 2.83
2063 2146 9.947433 TCGTAGGAATAGGAATTTTGTAGAAAA 57.053 29.630 0.00 0.00 35.52 2.29
2116 2199 7.747155 CTATGAGTAGGAATAGGAAACGAGA 57.253 40.000 0.00 0.00 0.00 4.04
2117 2200 8.343168 CTATGAGTAGGAATAGGAAACGAGAT 57.657 38.462 0.00 0.00 0.00 2.75
2118 2201 6.392625 TGAGTAGGAATAGGAAACGAGATG 57.607 41.667 0.00 0.00 0.00 2.90
2119 2202 5.892119 TGAGTAGGAATAGGAAACGAGATGT 59.108 40.000 0.00 0.00 0.00 3.06
2120 2203 6.039493 TGAGTAGGAATAGGAAACGAGATGTC 59.961 42.308 0.00 0.00 0.00 3.06
2121 2204 5.892119 AGTAGGAATAGGAAACGAGATGTCA 59.108 40.000 0.00 0.00 0.00 3.58
2122 2205 5.878406 AGGAATAGGAAACGAGATGTCAT 57.122 39.130 0.00 0.00 0.00 3.06
2123 2206 6.240549 AGGAATAGGAAACGAGATGTCATT 57.759 37.500 0.00 0.00 0.00 2.57
2124 2207 6.653989 AGGAATAGGAAACGAGATGTCATTT 58.346 36.000 0.00 0.00 0.00 2.32
2125 2208 6.540189 AGGAATAGGAAACGAGATGTCATTTG 59.460 38.462 0.00 0.00 0.00 2.32
2126 2209 6.238484 GGAATAGGAAACGAGATGTCATTTGG 60.238 42.308 0.00 0.00 0.00 3.28
2127 2210 4.021102 AGGAAACGAGATGTCATTTGGT 57.979 40.909 0.00 0.00 0.00 3.67
2128 2211 4.398319 AGGAAACGAGATGTCATTTGGTT 58.602 39.130 0.00 0.00 0.00 3.67
2129 2212 4.216257 AGGAAACGAGATGTCATTTGGTTG 59.784 41.667 4.80 0.00 0.00 3.77
2130 2213 4.215399 GGAAACGAGATGTCATTTGGTTGA 59.785 41.667 4.80 0.00 0.00 3.18
2131 2214 4.749245 AACGAGATGTCATTTGGTTGAC 57.251 40.909 3.39 0.00 45.05 3.18
2147 2230 5.984233 GGTTGACACCAAAGAATTTTTCC 57.016 39.130 0.00 0.00 43.61 3.13
2148 2231 5.423886 GGTTGACACCAAAGAATTTTTCCA 58.576 37.500 0.00 0.00 43.61 3.53
2149 2232 6.054941 GGTTGACACCAAAGAATTTTTCCAT 58.945 36.000 0.00 0.00 43.61 3.41
2150 2233 6.542005 GGTTGACACCAAAGAATTTTTCCATT 59.458 34.615 0.00 0.00 43.61 3.16
2151 2234 7.408910 GTTGACACCAAAGAATTTTTCCATTG 58.591 34.615 0.00 0.00 35.03 2.82
2152 2235 5.526846 TGACACCAAAGAATTTTTCCATTGC 59.473 36.000 0.00 0.00 35.03 3.56
2153 2236 4.511082 ACACCAAAGAATTTTTCCATTGCG 59.489 37.500 0.00 0.00 35.03 4.85
2154 2237 4.511082 CACCAAAGAATTTTTCCATTGCGT 59.489 37.500 0.00 0.00 35.03 5.24
2155 2238 4.749598 ACCAAAGAATTTTTCCATTGCGTC 59.250 37.500 0.00 0.00 35.03 5.19
2156 2239 4.990426 CCAAAGAATTTTTCCATTGCGTCT 59.010 37.500 0.00 0.00 35.03 4.18
2157 2240 6.155827 CCAAAGAATTTTTCCATTGCGTCTA 58.844 36.000 0.00 0.00 35.03 2.59
2158 2241 6.308766 CCAAAGAATTTTTCCATTGCGTCTAG 59.691 38.462 0.00 0.00 35.03 2.43
2159 2242 5.567138 AGAATTTTTCCATTGCGTCTAGG 57.433 39.130 0.00 0.00 0.00 3.02
2160 2243 3.782889 ATTTTTCCATTGCGTCTAGGC 57.217 42.857 0.00 0.00 0.00 3.93
2161 2244 2.489938 TTTTCCATTGCGTCTAGGCT 57.510 45.000 0.00 0.00 0.00 4.58
2162 2245 2.024176 TTTCCATTGCGTCTAGGCTC 57.976 50.000 0.00 0.00 0.00 4.70
2163 2246 0.901827 TTCCATTGCGTCTAGGCTCA 59.098 50.000 0.00 0.00 0.00 4.26
2164 2247 1.123077 TCCATTGCGTCTAGGCTCAT 58.877 50.000 0.00 0.00 0.00 2.90
2165 2248 1.486310 TCCATTGCGTCTAGGCTCATT 59.514 47.619 0.00 0.00 0.00 2.57
2166 2249 2.092968 TCCATTGCGTCTAGGCTCATTT 60.093 45.455 0.00 0.00 0.00 2.32
2167 2250 2.684881 CCATTGCGTCTAGGCTCATTTT 59.315 45.455 0.00 0.00 0.00 1.82
2168 2251 3.129287 CCATTGCGTCTAGGCTCATTTTT 59.871 43.478 0.00 0.00 0.00 1.94
2169 2252 4.335315 CCATTGCGTCTAGGCTCATTTTTA 59.665 41.667 0.00 0.00 0.00 1.52
2170 2253 5.009010 CCATTGCGTCTAGGCTCATTTTTAT 59.991 40.000 0.00 0.00 0.00 1.40
2171 2254 6.460123 CCATTGCGTCTAGGCTCATTTTTATT 60.460 38.462 0.00 0.00 0.00 1.40
2172 2255 6.509418 TTGCGTCTAGGCTCATTTTTATTT 57.491 33.333 0.00 0.00 0.00 1.40
2173 2256 6.509418 TGCGTCTAGGCTCATTTTTATTTT 57.491 33.333 0.00 0.00 0.00 1.82
2174 2257 6.551736 TGCGTCTAGGCTCATTTTTATTTTC 58.448 36.000 0.00 0.00 0.00 2.29
2175 2258 5.971792 GCGTCTAGGCTCATTTTTATTTTCC 59.028 40.000 0.00 0.00 0.00 3.13
2176 2259 6.495706 CGTCTAGGCTCATTTTTATTTTCCC 58.504 40.000 0.00 0.00 0.00 3.97
2177 2260 6.094881 CGTCTAGGCTCATTTTTATTTTCCCA 59.905 38.462 0.00 0.00 0.00 4.37
2178 2261 7.201821 CGTCTAGGCTCATTTTTATTTTCCCAT 60.202 37.037 0.00 0.00 0.00 4.00
2179 2262 7.922811 GTCTAGGCTCATTTTTATTTTCCCATG 59.077 37.037 0.00 0.00 0.00 3.66
2180 2263 6.872585 AGGCTCATTTTTATTTTCCCATGA 57.127 33.333 0.00 0.00 0.00 3.07
2181 2264 7.256494 AGGCTCATTTTTATTTTCCCATGAA 57.744 32.000 0.00 0.00 0.00 2.57
2182 2265 7.688343 AGGCTCATTTTTATTTTCCCATGAAA 58.312 30.769 0.00 0.00 38.69 2.69
2183 2266 8.330993 AGGCTCATTTTTATTTTCCCATGAAAT 58.669 29.630 0.00 0.00 40.08 2.17
2184 2267 9.612066 GGCTCATTTTTATTTTCCCATGAAATA 57.388 29.630 0.00 0.00 40.08 1.40
2197 2280 8.654485 TTCCCATGAAATATGGAGAAATATGG 57.346 34.615 7.48 0.00 41.64 2.74
2198 2281 7.999042 TCCCATGAAATATGGAGAAATATGGA 58.001 34.615 7.48 0.00 41.64 3.41
2199 2282 8.111545 TCCCATGAAATATGGAGAAATATGGAG 58.888 37.037 7.48 0.00 41.64 3.86
2200 2283 7.341256 CCCATGAAATATGGAGAAATATGGAGG 59.659 40.741 7.48 0.00 41.64 4.30
2201 2284 8.111545 CCATGAAATATGGAGAAATATGGAGGA 58.888 37.037 0.00 0.00 41.64 3.71
2202 2285 9.696572 CATGAAATATGGAGAAATATGGAGGAT 57.303 33.333 0.00 0.00 0.00 3.24
2205 2288 9.844257 GAAATATGGAGAAATATGGAGGATAGG 57.156 37.037 0.00 0.00 0.00 2.57
2206 2289 9.580103 AAATATGGAGAAATATGGAGGATAGGA 57.420 33.333 0.00 0.00 0.00 2.94
2207 2290 9.580103 AATATGGAGAAATATGGAGGATAGGAA 57.420 33.333 0.00 0.00 0.00 3.36
2208 2291 6.688073 TGGAGAAATATGGAGGATAGGAAC 57.312 41.667 0.00 0.00 0.00 3.62
2209 2292 5.548056 TGGAGAAATATGGAGGATAGGAACC 59.452 44.000 0.00 0.00 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.434884 CAACTCTCGCATGCCGGT 60.435 61.111 13.15 2.89 37.59 5.28
2 3 1.699656 CCTTCAACTCTCGCATGCCG 61.700 60.000 13.15 7.68 38.61 5.69
3 4 1.986575 GCCTTCAACTCTCGCATGCC 61.987 60.000 13.15 0.00 0.00 4.40
4 5 1.427020 GCCTTCAACTCTCGCATGC 59.573 57.895 7.91 7.91 0.00 4.06
5 6 1.699656 CGGCCTTCAACTCTCGCATG 61.700 60.000 0.00 0.00 0.00 4.06
6 7 1.448540 CGGCCTTCAACTCTCGCAT 60.449 57.895 0.00 0.00 0.00 4.73
8 9 2.815647 CCGGCCTTCAACTCTCGC 60.816 66.667 0.00 0.00 0.00 5.03
9 10 2.815647 GCCGGCCTTCAACTCTCG 60.816 66.667 18.11 0.00 0.00 4.04
10 11 2.815647 CGCCGGCCTTCAACTCTC 60.816 66.667 23.46 0.00 0.00 3.20
11 12 3.311110 TCGCCGGCCTTCAACTCT 61.311 61.111 23.46 0.00 0.00 3.24
12 13 3.119096 GTCGCCGGCCTTCAACTC 61.119 66.667 23.46 0.00 0.00 3.01
13 14 4.699522 GGTCGCCGGCCTTCAACT 62.700 66.667 23.46 0.00 0.00 3.16
15 16 3.561120 ATTGGTCGCCGGCCTTCAA 62.561 57.895 23.46 21.45 0.00 2.69
16 17 4.028490 ATTGGTCGCCGGCCTTCA 62.028 61.111 23.46 13.61 0.00 3.02
17 18 3.508840 CATTGGTCGCCGGCCTTC 61.509 66.667 23.46 11.32 0.00 3.46
23 24 2.801113 CTTTGCACCATTGGTCGCCG 62.801 60.000 20.38 7.05 31.02 6.46
24 25 1.080569 CTTTGCACCATTGGTCGCC 60.081 57.895 20.38 8.56 31.02 5.54
25 26 0.664166 CACTTTGCACCATTGGTCGC 60.664 55.000 17.92 17.92 31.02 5.19
26 27 0.664166 GCACTTTGCACCATTGGTCG 60.664 55.000 5.04 3.23 44.26 4.79
27 28 3.199764 GCACTTTGCACCATTGGTC 57.800 52.632 5.04 1.97 44.26 4.02
37 38 1.579429 CCCGGTTGTAGCACTTTGC 59.421 57.895 0.00 0.00 45.46 3.68
38 39 1.169661 TGCCCGGTTGTAGCACTTTG 61.170 55.000 0.00 0.00 0.00 2.77
39 40 0.251165 ATGCCCGGTTGTAGCACTTT 60.251 50.000 4.36 0.00 39.77 2.66
40 41 0.960364 CATGCCCGGTTGTAGCACTT 60.960 55.000 4.36 0.00 39.77 3.16
41 42 1.377202 CATGCCCGGTTGTAGCACT 60.377 57.895 4.36 0.00 39.77 4.40
42 43 2.406616 CCATGCCCGGTTGTAGCAC 61.407 63.158 4.36 0.00 39.77 4.40
43 44 2.045438 CCATGCCCGGTTGTAGCA 60.045 61.111 4.76 4.76 41.50 3.49
44 45 2.828549 CCCATGCCCGGTTGTAGC 60.829 66.667 0.00 0.00 0.00 3.58
45 46 1.748879 CACCCATGCCCGGTTGTAG 60.749 63.158 0.00 0.00 0.00 2.74
46 47 2.353189 CACCCATGCCCGGTTGTA 59.647 61.111 0.00 0.00 0.00 2.41
47 48 3.897122 ACACCCATGCCCGGTTGT 61.897 61.111 0.00 0.00 0.00 3.32
48 49 3.372730 CACACCCATGCCCGGTTG 61.373 66.667 0.00 0.00 0.00 3.77
55 56 2.048877 GTTGCAGCACACCCATGC 60.049 61.111 0.00 0.00 46.50 4.06
56 57 1.870055 GAGGTTGCAGCACACCCATG 61.870 60.000 18.03 0.00 0.00 3.66
57 58 1.604593 GAGGTTGCAGCACACCCAT 60.605 57.895 18.03 5.92 0.00 4.00
58 59 2.203337 GAGGTTGCAGCACACCCA 60.203 61.111 18.03 0.00 0.00 4.51
59 60 2.203337 TGAGGTTGCAGCACACCC 60.203 61.111 18.03 9.27 0.00 4.61
60 61 0.607489 ATCTGAGGTTGCAGCACACC 60.607 55.000 15.31 15.31 35.86 4.16
61 62 0.520404 CATCTGAGGTTGCAGCACAC 59.480 55.000 2.05 0.00 35.86 3.82
62 63 0.397564 TCATCTGAGGTTGCAGCACA 59.602 50.000 2.05 1.25 35.86 4.57
63 64 0.801251 GTCATCTGAGGTTGCAGCAC 59.199 55.000 2.05 0.00 35.86 4.40
64 65 0.671472 CGTCATCTGAGGTTGCAGCA 60.671 55.000 2.05 0.00 35.86 4.41
65 66 0.390340 TCGTCATCTGAGGTTGCAGC 60.390 55.000 0.00 0.00 35.86 5.25
66 67 1.998315 CTTCGTCATCTGAGGTTGCAG 59.002 52.381 0.00 0.00 37.24 4.41
67 68 1.338105 CCTTCGTCATCTGAGGTTGCA 60.338 52.381 0.36 0.00 0.00 4.08
68 69 1.338200 ACCTTCGTCATCTGAGGTTGC 60.338 52.381 0.36 0.00 0.00 4.17
69 70 2.341257 CACCTTCGTCATCTGAGGTTG 58.659 52.381 0.00 0.00 0.00 3.77
70 71 1.338200 GCACCTTCGTCATCTGAGGTT 60.338 52.381 0.00 0.00 0.00 3.50
71 72 0.247736 GCACCTTCGTCATCTGAGGT 59.752 55.000 0.36 0.00 0.00 3.85
72 73 0.247460 TGCACCTTCGTCATCTGAGG 59.753 55.000 0.00 0.00 0.00 3.86
73 74 2.084610 TTGCACCTTCGTCATCTGAG 57.915 50.000 0.00 0.00 0.00 3.35
74 75 2.542020 TTTGCACCTTCGTCATCTGA 57.458 45.000 0.00 0.00 0.00 3.27
75 76 4.183865 TCTATTTGCACCTTCGTCATCTG 58.816 43.478 0.00 0.00 0.00 2.90
76 77 4.471904 TCTATTTGCACCTTCGTCATCT 57.528 40.909 0.00 0.00 0.00 2.90
77 78 4.631813 ACTTCTATTTGCACCTTCGTCATC 59.368 41.667 0.00 0.00 0.00 2.92
78 79 4.579869 ACTTCTATTTGCACCTTCGTCAT 58.420 39.130 0.00 0.00 0.00 3.06
79 80 3.994392 GACTTCTATTTGCACCTTCGTCA 59.006 43.478 0.00 0.00 0.00 4.35
80 81 3.060895 CGACTTCTATTTGCACCTTCGTC 59.939 47.826 0.00 0.00 0.00 4.20
81 82 2.993899 CGACTTCTATTTGCACCTTCGT 59.006 45.455 0.00 0.00 0.00 3.85
82 83 3.250744 TCGACTTCTATTTGCACCTTCG 58.749 45.455 0.00 0.00 0.00 3.79
83 84 4.092091 CACTCGACTTCTATTTGCACCTTC 59.908 45.833 0.00 0.00 0.00 3.46
84 85 3.997021 CACTCGACTTCTATTTGCACCTT 59.003 43.478 0.00 0.00 0.00 3.50
85 86 3.589988 CACTCGACTTCTATTTGCACCT 58.410 45.455 0.00 0.00 0.00 4.00
86 87 2.673368 CCACTCGACTTCTATTTGCACC 59.327 50.000 0.00 0.00 0.00 5.01
87 88 3.326747 ACCACTCGACTTCTATTTGCAC 58.673 45.455 0.00 0.00 0.00 4.57
88 89 3.678056 ACCACTCGACTTCTATTTGCA 57.322 42.857 0.00 0.00 0.00 4.08
89 90 5.358298 AAAACCACTCGACTTCTATTTGC 57.642 39.130 0.00 0.00 0.00 3.68
90 91 6.851330 GTCAAAAACCACTCGACTTCTATTTG 59.149 38.462 0.00 0.00 0.00 2.32
91 92 6.292703 CGTCAAAAACCACTCGACTTCTATTT 60.293 38.462 0.00 0.00 0.00 1.40
92 93 5.176958 CGTCAAAAACCACTCGACTTCTATT 59.823 40.000 0.00 0.00 0.00 1.73
93 94 4.684703 CGTCAAAAACCACTCGACTTCTAT 59.315 41.667 0.00 0.00 0.00 1.98
94 95 4.046462 CGTCAAAAACCACTCGACTTCTA 58.954 43.478 0.00 0.00 0.00 2.10
95 96 2.864343 CGTCAAAAACCACTCGACTTCT 59.136 45.455 0.00 0.00 0.00 2.85
96 97 2.033151 CCGTCAAAAACCACTCGACTTC 60.033 50.000 0.00 0.00 0.00 3.01
97 98 1.937899 CCGTCAAAAACCACTCGACTT 59.062 47.619 0.00 0.00 0.00 3.01
98 99 1.137479 TCCGTCAAAAACCACTCGACT 59.863 47.619 0.00 0.00 0.00 4.18
99 100 1.525619 CTCCGTCAAAAACCACTCGAC 59.474 52.381 0.00 0.00 0.00 4.20
100 101 1.409790 TCTCCGTCAAAAACCACTCGA 59.590 47.619 0.00 0.00 0.00 4.04
101 102 1.792949 CTCTCCGTCAAAAACCACTCG 59.207 52.381 0.00 0.00 0.00 4.18
102 103 2.143925 CCTCTCCGTCAAAAACCACTC 58.856 52.381 0.00 0.00 0.00 3.51
103 104 1.766496 TCCTCTCCGTCAAAAACCACT 59.234 47.619 0.00 0.00 0.00 4.00
104 105 1.871676 GTCCTCTCCGTCAAAAACCAC 59.128 52.381 0.00 0.00 0.00 4.16
105 106 1.539496 CGTCCTCTCCGTCAAAAACCA 60.539 52.381 0.00 0.00 0.00 3.67
106 107 1.145803 CGTCCTCTCCGTCAAAAACC 58.854 55.000 0.00 0.00 0.00 3.27
107 108 1.145803 CCGTCCTCTCCGTCAAAAAC 58.854 55.000 0.00 0.00 0.00 2.43
108 109 0.754472 ACCGTCCTCTCCGTCAAAAA 59.246 50.000 0.00 0.00 0.00 1.94
109 110 0.032952 CACCGTCCTCTCCGTCAAAA 59.967 55.000 0.00 0.00 0.00 2.44
110 111 1.663739 CACCGTCCTCTCCGTCAAA 59.336 57.895 0.00 0.00 0.00 2.69
111 112 2.927580 GCACCGTCCTCTCCGTCAA 61.928 63.158 0.00 0.00 0.00 3.18
112 113 3.371063 GCACCGTCCTCTCCGTCA 61.371 66.667 0.00 0.00 0.00 4.35
113 114 2.637383 AAGCACCGTCCTCTCCGTC 61.637 63.158 0.00 0.00 0.00 4.79
114 115 2.600769 AAGCACCGTCCTCTCCGT 60.601 61.111 0.00 0.00 0.00 4.69
115 116 2.125912 CAAGCACCGTCCTCTCCG 60.126 66.667 0.00 0.00 0.00 4.63
116 117 1.374758 CACAAGCACCGTCCTCTCC 60.375 63.158 0.00 0.00 0.00 3.71
117 118 2.029844 GCACAAGCACCGTCCTCTC 61.030 63.158 0.00 0.00 41.58 3.20
118 119 2.031163 GCACAAGCACCGTCCTCT 59.969 61.111 0.00 0.00 41.58 3.69
119 120 3.050275 GGCACAAGCACCGTCCTC 61.050 66.667 0.00 0.00 44.61 3.71
120 121 4.988598 CGGCACAAGCACCGTCCT 62.989 66.667 0.00 0.00 44.46 3.85
154 155 3.838271 TCGCCAGTCGATGCCCTC 61.838 66.667 0.00 0.00 43.16 4.30
176 177 2.046892 CCCTCGAAGCACCACCTG 60.047 66.667 0.00 0.00 0.00 4.00
177 178 4.021925 GCCCTCGAAGCACCACCT 62.022 66.667 2.34 0.00 0.00 4.00
178 179 1.972660 ATAGCCCTCGAAGCACCACC 61.973 60.000 9.54 0.00 0.00 4.61
179 180 0.107654 AATAGCCCTCGAAGCACCAC 60.108 55.000 9.54 0.00 0.00 4.16
180 181 0.107703 CAATAGCCCTCGAAGCACCA 60.108 55.000 9.54 0.00 0.00 4.17
181 182 1.440145 GCAATAGCCCTCGAAGCACC 61.440 60.000 9.54 0.00 33.58 5.01
182 183 0.462759 AGCAATAGCCCTCGAAGCAC 60.463 55.000 9.54 0.00 43.56 4.40
183 184 0.179073 GAGCAATAGCCCTCGAAGCA 60.179 55.000 9.54 0.00 43.56 3.91
184 185 0.882484 GGAGCAATAGCCCTCGAAGC 60.882 60.000 0.00 0.00 43.56 3.86
185 186 0.598680 CGGAGCAATAGCCCTCGAAG 60.599 60.000 0.00 0.00 43.56 3.79
186 187 1.441729 CGGAGCAATAGCCCTCGAA 59.558 57.895 0.00 0.00 43.56 3.71
187 188 3.129300 CGGAGCAATAGCCCTCGA 58.871 61.111 0.00 0.00 43.56 4.04
200 201 4.647615 CGCTATGGACGGGCGGAG 62.648 72.222 0.00 0.00 44.32 4.63
207 208 2.655364 CGAGTGCCGCTATGGACG 60.655 66.667 0.00 0.00 42.00 4.79
208 209 2.279517 CCGAGTGCCGCTATGGAC 60.280 66.667 0.00 0.00 42.00 4.02
209 210 4.221422 GCCGAGTGCCGCTATGGA 62.221 66.667 0.46 0.00 42.00 3.41
226 227 0.318784 GATAGCCCTAGCGAACACCG 60.319 60.000 0.00 0.00 46.67 4.94
227 228 1.041437 AGATAGCCCTAGCGAACACC 58.959 55.000 0.00 0.00 46.67 4.16
228 229 1.870167 GCAGATAGCCCTAGCGAACAC 60.870 57.143 0.00 0.00 46.67 3.32
229 230 0.389391 GCAGATAGCCCTAGCGAACA 59.611 55.000 0.00 0.00 46.67 3.18
230 231 3.202923 GCAGATAGCCCTAGCGAAC 57.797 57.895 0.00 0.00 46.67 3.95
246 247 4.823988 AATCAGACGATGTGCACTGGCA 62.824 50.000 19.41 0.00 38.88 4.92
247 248 0.742281 ATCAGACGATGTGCACTGGC 60.742 55.000 19.41 10.21 41.68 4.85
248 249 1.730501 AATCAGACGATGTGCACTGG 58.269 50.000 19.41 9.48 30.13 4.00
249 250 3.818961 AAAATCAGACGATGTGCACTG 57.181 42.857 19.41 10.42 30.13 3.66
250 251 3.058016 CCAAAAATCAGACGATGTGCACT 60.058 43.478 19.41 3.19 30.13 4.40
251 252 3.236816 CCAAAAATCAGACGATGTGCAC 58.763 45.455 10.75 10.75 30.13 4.57
252 253 2.228582 CCCAAAAATCAGACGATGTGCA 59.771 45.455 0.00 0.00 30.13 4.57
253 254 2.415893 CCCCAAAAATCAGACGATGTGC 60.416 50.000 0.00 0.00 30.13 4.57
254 255 3.081061 TCCCCAAAAATCAGACGATGTG 58.919 45.455 0.00 0.00 30.13 3.21
255 256 3.433306 TCCCCAAAAATCAGACGATGT 57.567 42.857 0.00 0.00 30.13 3.06
256 257 3.316308 GGATCCCCAAAAATCAGACGATG 59.684 47.826 0.00 0.00 30.13 3.84
257 258 3.053693 TGGATCCCCAAAAATCAGACGAT 60.054 43.478 9.90 0.00 40.09 3.73
258 259 2.307392 TGGATCCCCAAAAATCAGACGA 59.693 45.455 9.90 0.00 40.09 4.20
259 260 2.684881 CTGGATCCCCAAAAATCAGACG 59.315 50.000 9.90 0.00 42.98 4.18
260 261 2.428530 GCTGGATCCCCAAAAATCAGAC 59.571 50.000 9.90 0.00 42.98 3.51
261 262 2.624029 GGCTGGATCCCCAAAAATCAGA 60.624 50.000 9.90 0.00 42.98 3.27
262 263 1.758862 GGCTGGATCCCCAAAAATCAG 59.241 52.381 9.90 0.00 42.98 2.90
263 264 1.362237 AGGCTGGATCCCCAAAAATCA 59.638 47.619 9.90 0.00 42.98 2.57
264 265 2.165357 AGGCTGGATCCCCAAAAATC 57.835 50.000 9.90 0.00 42.98 2.17
265 266 2.573009 CAAAGGCTGGATCCCCAAAAAT 59.427 45.455 9.90 0.00 42.98 1.82
266 267 1.977129 CAAAGGCTGGATCCCCAAAAA 59.023 47.619 9.90 0.00 42.98 1.94
267 268 1.643310 CAAAGGCTGGATCCCCAAAA 58.357 50.000 9.90 0.00 42.98 2.44
268 269 3.379617 CAAAGGCTGGATCCCCAAA 57.620 52.632 9.90 0.00 42.98 3.28
294 295 3.296709 TTTCGAGGGCTGTCGCTCC 62.297 63.158 5.13 0.00 46.13 4.70
295 296 1.807573 CTTTCGAGGGCTGTCGCTC 60.808 63.158 5.13 6.23 45.61 5.03
296 297 2.262915 CTTTCGAGGGCTGTCGCT 59.737 61.111 5.13 0.00 39.90 4.93
297 298 2.815647 CCTTTCGAGGGCTGTCGC 60.816 66.667 5.13 0.00 39.90 5.19
298 299 2.815647 GCCTTTCGAGGGCTGTCG 60.816 66.667 19.80 3.79 45.57 4.35
304 305 0.179062 CAGATCCAGCCTTTCGAGGG 60.179 60.000 2.61 2.61 0.00 4.30
305 306 0.826715 TCAGATCCAGCCTTTCGAGG 59.173 55.000 0.00 0.00 0.00 4.63
306 307 1.800655 CGTCAGATCCAGCCTTTCGAG 60.801 57.143 0.00 0.00 0.00 4.04
307 308 0.173481 CGTCAGATCCAGCCTTTCGA 59.827 55.000 0.00 0.00 0.00 3.71
308 309 0.173481 TCGTCAGATCCAGCCTTTCG 59.827 55.000 0.00 0.00 0.00 3.46
309 310 2.611225 ATCGTCAGATCCAGCCTTTC 57.389 50.000 0.00 0.00 29.44 2.62
310 311 3.012518 CAAATCGTCAGATCCAGCCTTT 58.987 45.455 0.00 0.00 35.74 3.11
311 312 2.237143 TCAAATCGTCAGATCCAGCCTT 59.763 45.455 0.00 0.00 35.74 4.35
312 313 1.833630 TCAAATCGTCAGATCCAGCCT 59.166 47.619 0.00 0.00 35.74 4.58
313 314 2.315925 TCAAATCGTCAGATCCAGCC 57.684 50.000 0.00 0.00 35.74 4.85
314 315 2.611292 CCTTCAAATCGTCAGATCCAGC 59.389 50.000 0.00 0.00 35.74 4.85
315 316 3.866651 ACCTTCAAATCGTCAGATCCAG 58.133 45.455 0.00 0.00 35.74 3.86
316 317 3.676049 CGACCTTCAAATCGTCAGATCCA 60.676 47.826 0.00 0.00 35.74 3.41
317 318 2.860735 CGACCTTCAAATCGTCAGATCC 59.139 50.000 0.00 0.00 35.74 3.36
325 326 1.415374 ACGACACGACCTTCAAATCG 58.585 50.000 0.00 0.00 43.97 3.34
326 327 4.421948 AGATACGACACGACCTTCAAATC 58.578 43.478 0.00 0.00 0.00 2.17
327 328 4.451629 AGATACGACACGACCTTCAAAT 57.548 40.909 0.00 0.00 0.00 2.32
328 329 3.928727 AGATACGACACGACCTTCAAA 57.071 42.857 0.00 0.00 0.00 2.69
329 330 4.726416 GTTAGATACGACACGACCTTCAA 58.274 43.478 0.00 0.00 0.00 2.69
330 331 4.346734 GTTAGATACGACACGACCTTCA 57.653 45.455 0.00 0.00 0.00 3.02
343 344 2.124903 CGCATGTCACCCGTTAGATAC 58.875 52.381 0.00 0.00 0.00 2.24
344 345 2.025898 TCGCATGTCACCCGTTAGATA 58.974 47.619 0.00 0.00 0.00 1.98
345 346 0.821517 TCGCATGTCACCCGTTAGAT 59.178 50.000 0.00 0.00 0.00 1.98
346 347 0.108992 GTCGCATGTCACCCGTTAGA 60.109 55.000 0.00 0.00 0.00 2.10
347 348 1.082117 GGTCGCATGTCACCCGTTAG 61.082 60.000 4.29 0.00 0.00 2.34
348 349 1.079681 GGTCGCATGTCACCCGTTA 60.080 57.895 4.29 0.00 0.00 3.18
349 350 2.358247 GGTCGCATGTCACCCGTT 60.358 61.111 4.29 0.00 0.00 4.44
350 351 4.735132 CGGTCGCATGTCACCCGT 62.735 66.667 9.02 0.00 34.10 5.28
353 354 4.760047 AGCCGGTCGCATGTCACC 62.760 66.667 1.90 5.37 41.38 4.02
354 355 3.490759 CAGCCGGTCGCATGTCAC 61.491 66.667 1.90 0.00 41.38 3.67
355 356 3.647649 CTCAGCCGGTCGCATGTCA 62.648 63.158 1.90 0.00 41.38 3.58
356 357 2.887568 CTCAGCCGGTCGCATGTC 60.888 66.667 1.90 0.00 41.38 3.06
362 363 3.777925 CAAACGCTCAGCCGGTCG 61.778 66.667 1.90 1.89 0.00 4.79
363 364 3.423154 CCAAACGCTCAGCCGGTC 61.423 66.667 1.90 0.00 0.00 4.79
386 387 3.245284 CACATAATTTAGACGCCGACAGG 59.755 47.826 0.00 0.00 41.62 4.00
387 388 4.109766 TCACATAATTTAGACGCCGACAG 58.890 43.478 0.00 0.00 0.00 3.51
388 389 4.112716 TCACATAATTTAGACGCCGACA 57.887 40.909 0.00 0.00 0.00 4.35
389 390 4.084537 CCATCACATAATTTAGACGCCGAC 60.085 45.833 0.00 0.00 0.00 4.79
390 391 4.055360 CCATCACATAATTTAGACGCCGA 58.945 43.478 0.00 0.00 0.00 5.54
391 392 4.055360 TCCATCACATAATTTAGACGCCG 58.945 43.478 0.00 0.00 0.00 6.46
392 393 6.371809 TTTCCATCACATAATTTAGACGCC 57.628 37.500 0.00 0.00 0.00 5.68
393 394 7.865707 AGATTTCCATCACATAATTTAGACGC 58.134 34.615 0.00 0.00 0.00 5.19
394 395 9.869844 GAAGATTTCCATCACATAATTTAGACG 57.130 33.333 0.00 0.00 0.00 4.18
465 466 1.202533 GGTCGCATTTAGCAGGCTCTA 60.203 52.381 0.00 0.00 46.13 2.43
466 467 0.462759 GGTCGCATTTAGCAGGCTCT 60.463 55.000 0.00 0.00 46.13 4.09
474 475 3.252974 ACTTCCTCTGGTCGCATTTAG 57.747 47.619 0.00 0.00 0.00 1.85
484 485 3.810941 CGCTAGTCTAGTACTTCCTCTGG 59.189 52.174 0.00 0.00 39.80 3.86
496 497 4.797693 TCGAAATCACTCGCTAGTCTAG 57.202 45.455 2.18 2.18 38.73 2.43
498 499 3.303461 CGATCGAAATCACTCGCTAGTCT 60.303 47.826 10.26 0.00 38.73 3.24
561 568 4.222114 GAGAAACAAAAGAATGAGCGGTG 58.778 43.478 0.00 0.00 0.00 4.94
640 683 0.591659 GAGGAAACCTTTGTGTCGCC 59.408 55.000 0.00 0.00 31.76 5.54
646 689 4.629092 GTTCTAGTCGAGGAAACCTTTGT 58.371 43.478 0.00 0.00 31.76 2.83
691 743 1.134965 GGCGTACTCTCTTGTGCATCT 60.135 52.381 0.00 0.00 0.00 2.90
718 770 5.009310 CACACGACATTGGCTATAGGTAGTA 59.991 44.000 1.04 0.00 0.00 1.82
719 771 3.958798 ACACGACATTGGCTATAGGTAGT 59.041 43.478 1.04 0.00 0.00 2.73
720 772 4.299155 CACACGACATTGGCTATAGGTAG 58.701 47.826 1.04 0.00 0.00 3.18
721 773 3.069016 CCACACGACATTGGCTATAGGTA 59.931 47.826 1.04 0.00 0.00 3.08
722 774 2.158957 CCACACGACATTGGCTATAGGT 60.159 50.000 1.04 0.00 0.00 3.08
723 775 2.483876 CCACACGACATTGGCTATAGG 58.516 52.381 1.04 0.00 0.00 2.57
724 776 2.483876 CCCACACGACATTGGCTATAG 58.516 52.381 0.00 0.00 0.00 1.31
725 777 1.474320 GCCCACACGACATTGGCTATA 60.474 52.381 0.00 0.00 39.05 1.31
726 778 0.748005 GCCCACACGACATTGGCTAT 60.748 55.000 0.00 0.00 39.05 2.97
747 799 4.151689 CGAATGTTGTCCTGAACGTATTGT 59.848 41.667 0.00 0.00 0.00 2.71
797 849 1.220206 CAGCTCAGATTCCCGTGCT 59.780 57.895 0.00 0.00 0.00 4.40
801 853 2.587194 CGCCAGCTCAGATTCCCG 60.587 66.667 0.00 0.00 0.00 5.14
909 961 1.264749 TGGGAACTCTCCGGGATGTG 61.265 60.000 0.00 0.00 43.51 3.21
910 962 0.978146 CTGGGAACTCTCCGGGATGT 60.978 60.000 0.00 0.00 43.51 3.06
911 963 0.687757 TCTGGGAACTCTCCGGGATG 60.688 60.000 0.00 0.00 43.51 3.51
912 964 0.042731 TTCTGGGAACTCTCCGGGAT 59.957 55.000 0.00 0.00 43.51 3.85
968 1022 4.015764 CCTCTCTCTGATCTGTTCTGTCA 58.984 47.826 0.00 0.00 0.00 3.58
991 1045 3.551407 GTCCGCCATCTCCCCTCC 61.551 72.222 0.00 0.00 0.00 4.30
1032 1086 2.109799 AGCAGCACGAACAGCACT 59.890 55.556 0.00 0.00 0.00 4.40
1104 1158 3.807538 CCGCTGGTGTGCATGCTC 61.808 66.667 20.33 16.39 0.00 4.26
1262 1320 4.569943 TGCAGACAGACAGATCTTAAACC 58.430 43.478 0.00 0.00 30.42 3.27
1351 1413 4.685628 TCGATCTTTAACACCGGTTACAAC 59.314 41.667 2.97 0.00 39.14 3.32
1410 1476 4.092968 ACTCGAATTTTCAATCCAGCGTAC 59.907 41.667 0.00 0.00 0.00 3.67
1417 1483 5.541098 AACCGTACTCGAATTTTCAATCC 57.459 39.130 0.00 0.00 39.71 3.01
1440 1506 3.118956 AGGCAAAAACAAACGACCAATCA 60.119 39.130 0.00 0.00 0.00 2.57
1458 1526 1.289066 CCTGAACGACTCGAAGGCA 59.711 57.895 5.20 0.00 0.00 4.75
1469 1537 1.333619 CCTCAACCAAACACCTGAACG 59.666 52.381 0.00 0.00 0.00 3.95
1479 1547 3.372822 GCGTAATCGAATCCTCAACCAAA 59.627 43.478 0.00 0.00 39.71 3.28
1513 1581 9.434559 GAGGCAACGTTTTATATATTCTCAAAC 57.565 33.333 0.00 0.00 46.39 2.93
1517 1585 8.989160 GTTGAGGCAACGTTTTATATATTCTC 57.011 34.615 0.00 0.00 46.39 2.87
1532 1600 2.623416 AGGTGCTTAAAGTTGAGGCAAC 59.377 45.455 4.14 4.14 43.83 4.17
1536 1604 2.737252 GACGAGGTGCTTAAAGTTGAGG 59.263 50.000 0.00 0.00 0.00 3.86
1540 1608 2.550208 CCCAGACGAGGTGCTTAAAGTT 60.550 50.000 0.00 0.00 0.00 2.66
1542 1610 1.002087 ACCCAGACGAGGTGCTTAAAG 59.998 52.381 0.00 0.00 35.85 1.85
1544 1612 2.754648 ACCCAGACGAGGTGCTTAA 58.245 52.632 0.00 0.00 35.85 1.85
1643 1711 6.705825 GCCTAAATGTGTTTCCAAAAACTGAT 59.294 34.615 3.06 0.00 44.23 2.90
1645 1713 5.236263 GGCCTAAATGTGTTTCCAAAAACTG 59.764 40.000 0.00 0.00 44.23 3.16
1647 1722 4.210328 CGGCCTAAATGTGTTTCCAAAAAC 59.790 41.667 0.00 0.00 44.18 2.43
1670 1745 3.782889 AATCCTAGGCAAATCAAACGC 57.217 42.857 2.96 0.00 0.00 4.84
1671 1746 5.801947 CAGAAAATCCTAGGCAAATCAAACG 59.198 40.000 2.96 0.00 0.00 3.60
1673 1748 6.916360 ACAGAAAATCCTAGGCAAATCAAA 57.084 33.333 2.96 0.00 0.00 2.69
1716 1798 4.201812 CCTGTAAATCAAACGACATCGCAT 60.202 41.667 0.14 0.00 44.43 4.73
1721 1803 6.206634 ACACAATCCTGTAAATCAAACGACAT 59.793 34.615 0.00 0.00 33.22 3.06
1744 1827 1.231221 CGATTGGTTTCGGTGGAACA 58.769 50.000 0.00 0.00 39.98 3.18
1745 1828 1.232119 ACGATTGGTTTCGGTGGAAC 58.768 50.000 0.00 0.00 43.33 3.62
1746 1829 2.835580 TACGATTGGTTTCGGTGGAA 57.164 45.000 0.00 0.00 43.33 3.53
1747 1830 2.835580 TTACGATTGGTTTCGGTGGA 57.164 45.000 0.00 0.00 43.33 4.02
1748 1831 5.548706 TTATTTACGATTGGTTTCGGTGG 57.451 39.130 0.00 0.00 43.33 4.61
1749 1832 7.219344 GGATTTTATTTACGATTGGTTTCGGTG 59.781 37.037 0.00 0.00 43.33 4.94
1750 1833 7.094291 TGGATTTTATTTACGATTGGTTTCGGT 60.094 33.333 0.00 0.00 43.33 4.69
1751 1834 7.251994 TGGATTTTATTTACGATTGGTTTCGG 58.748 34.615 0.00 0.00 43.33 4.30
1752 1835 8.850454 ATGGATTTTATTTACGATTGGTTTCG 57.150 30.769 0.00 0.00 44.56 3.46
1767 1850 9.739276 TCTGTGAAACTGAACTATGGATTTTAT 57.261 29.630 0.00 0.00 42.05 1.40
1781 1864 5.126869 TCATTGCCTTTTTCTGTGAAACTGA 59.873 36.000 0.00 0.00 43.36 3.41
1782 1865 5.350633 TCATTGCCTTTTTCTGTGAAACTG 58.649 37.500 0.00 0.00 38.04 3.16
1783 1866 5.452356 CCTCATTGCCTTTTTCTGTGAAACT 60.452 40.000 0.00 0.00 38.04 2.66
1784 1867 4.746611 CCTCATTGCCTTTTTCTGTGAAAC 59.253 41.667 0.00 0.00 37.35 2.78
1785 1868 4.648762 TCCTCATTGCCTTTTTCTGTGAAA 59.351 37.500 0.00 0.00 0.00 2.69
1786 1869 4.037923 GTCCTCATTGCCTTTTTCTGTGAA 59.962 41.667 0.00 0.00 0.00 3.18
1787 1870 3.569701 GTCCTCATTGCCTTTTTCTGTGA 59.430 43.478 0.00 0.00 0.00 3.58
1788 1871 3.571401 AGTCCTCATTGCCTTTTTCTGTG 59.429 43.478 0.00 0.00 0.00 3.66
1789 1872 3.837355 AGTCCTCATTGCCTTTTTCTGT 58.163 40.909 0.00 0.00 0.00 3.41
1790 1873 4.279169 TGAAGTCCTCATTGCCTTTTTCTG 59.721 41.667 0.00 0.00 0.00 3.02
1791 1874 4.473444 TGAAGTCCTCATTGCCTTTTTCT 58.527 39.130 0.00 0.00 0.00 2.52
1792 1875 4.853924 TGAAGTCCTCATTGCCTTTTTC 57.146 40.909 0.00 0.00 0.00 2.29
1793 1876 4.020839 CCATGAAGTCCTCATTGCCTTTTT 60.021 41.667 0.00 0.00 42.46 1.94
1794 1877 3.512724 CCATGAAGTCCTCATTGCCTTTT 59.487 43.478 0.00 0.00 42.46 2.27
1795 1878 3.094572 CCATGAAGTCCTCATTGCCTTT 58.905 45.455 0.00 0.00 42.46 3.11
1796 1879 2.309755 TCCATGAAGTCCTCATTGCCTT 59.690 45.455 0.00 0.00 42.46 4.35
1797 1880 1.918262 TCCATGAAGTCCTCATTGCCT 59.082 47.619 0.00 0.00 42.46 4.75
1798 1881 2.425143 TCCATGAAGTCCTCATTGCC 57.575 50.000 0.00 0.00 42.46 4.52
1799 1882 4.789012 TTTTCCATGAAGTCCTCATTGC 57.211 40.909 0.00 0.00 42.46 3.56
1800 1883 6.154021 AGGATTTTTCCATGAAGTCCTCATTG 59.846 38.462 4.41 0.00 42.46 2.82
1801 1884 6.259123 AGGATTTTTCCATGAAGTCCTCATT 58.741 36.000 4.41 0.00 42.46 2.57
1802 1885 5.835582 AGGATTTTTCCATGAAGTCCTCAT 58.164 37.500 4.41 0.00 46.25 2.90
1803 1886 5.261040 AGGATTTTTCCATGAAGTCCTCA 57.739 39.130 4.41 0.00 38.81 3.86
1804 1887 5.298026 GCTAGGATTTTTCCATGAAGTCCTC 59.702 44.000 11.51 0.00 34.30 3.71
1805 1888 5.196695 GCTAGGATTTTTCCATGAAGTCCT 58.803 41.667 12.46 12.46 35.52 3.85
1806 1889 4.035675 CGCTAGGATTTTTCCATGAAGTCC 59.964 45.833 0.00 0.00 0.00 3.85
1807 1890 4.035675 CCGCTAGGATTTTTCCATGAAGTC 59.964 45.833 0.00 0.00 41.02 3.01
1808 1891 3.947834 CCGCTAGGATTTTTCCATGAAGT 59.052 43.478 0.00 0.00 41.02 3.01
1809 1892 3.316308 CCCGCTAGGATTTTTCCATGAAG 59.684 47.826 0.00 0.00 41.02 3.02
1810 1893 3.053991 TCCCGCTAGGATTTTTCCATGAA 60.054 43.478 0.00 0.00 40.93 2.57
1811 1894 2.507886 TCCCGCTAGGATTTTTCCATGA 59.492 45.455 0.00 0.00 40.93 3.07
1812 1895 2.930950 TCCCGCTAGGATTTTTCCATG 58.069 47.619 0.00 0.00 40.93 3.66
1813 1896 3.202151 TCTTCCCGCTAGGATTTTTCCAT 59.798 43.478 0.00 0.00 46.94 3.41
1814 1897 2.574369 TCTTCCCGCTAGGATTTTTCCA 59.426 45.455 0.00 0.00 46.94 3.53
1815 1898 3.277142 TCTTCCCGCTAGGATTTTTCC 57.723 47.619 0.00 0.00 46.94 3.13
1816 1899 5.638596 TTTTCTTCCCGCTAGGATTTTTC 57.361 39.130 0.00 0.00 46.94 2.29
1817 1900 5.624509 GCATTTTCTTCCCGCTAGGATTTTT 60.625 40.000 0.00 0.00 46.94 1.94
1818 1901 4.142160 GCATTTTCTTCCCGCTAGGATTTT 60.142 41.667 0.00 0.00 46.94 1.82
1819 1902 3.381590 GCATTTTCTTCCCGCTAGGATTT 59.618 43.478 0.00 0.00 46.94 2.17
1820 1903 2.952310 GCATTTTCTTCCCGCTAGGATT 59.048 45.455 0.00 0.00 46.94 3.01
1821 1904 2.576615 GCATTTTCTTCCCGCTAGGAT 58.423 47.619 0.00 0.00 46.94 3.24
1822 1905 1.742411 CGCATTTTCTTCCCGCTAGGA 60.742 52.381 0.00 0.00 45.68 2.94
1823 1906 0.657840 CGCATTTTCTTCCCGCTAGG 59.342 55.000 0.00 0.00 37.24 3.02
1824 1907 0.028110 GCGCATTTTCTTCCCGCTAG 59.972 55.000 0.30 0.00 41.28 3.42
1825 1908 0.675208 TGCGCATTTTCTTCCCGCTA 60.675 50.000 5.66 0.00 44.44 4.26
1826 1909 1.971167 TGCGCATTTTCTTCCCGCT 60.971 52.632 5.66 0.00 44.44 5.52
1827 1910 1.801512 GTGCGCATTTTCTTCCCGC 60.802 57.895 15.91 0.00 44.39 6.13
1828 1911 1.511887 CGTGCGCATTTTCTTCCCG 60.512 57.895 15.91 4.88 0.00 5.14
1829 1912 1.801512 GCGTGCGCATTTTCTTCCC 60.802 57.895 15.91 0.00 41.49 3.97
1830 1913 3.754091 GCGTGCGCATTTTCTTCC 58.246 55.556 15.91 0.00 41.49 3.46
1840 1923 1.154205 ATAGGAACTCATGCGTGCGC 61.154 55.000 9.85 9.85 41.75 6.09
1841 1924 0.578683 CATAGGAACTCATGCGTGCG 59.421 55.000 0.00 0.00 41.75 5.34
1842 1925 1.656652 ACATAGGAACTCATGCGTGC 58.343 50.000 0.00 0.00 41.75 5.34
1843 1926 4.685169 AAAACATAGGAACTCATGCGTG 57.315 40.909 0.00 0.00 41.75 5.34
1870 1953 9.539825 CTCACATAACTGCTATTTGATTCTAGT 57.460 33.333 0.00 0.00 28.59 2.57
1871 1954 9.755804 TCTCACATAACTGCTATTTGATTCTAG 57.244 33.333 0.00 0.00 28.59 2.43
1873 1956 9.624373 ATTCTCACATAACTGCTATTTGATTCT 57.376 29.630 0.00 0.00 28.59 2.40
1876 1959 8.844244 GGAATTCTCACATAACTGCTATTTGAT 58.156 33.333 5.23 0.00 28.59 2.57
1877 1960 8.049117 AGGAATTCTCACATAACTGCTATTTGA 58.951 33.333 5.23 0.00 0.00 2.69
1878 1961 8.218338 AGGAATTCTCACATAACTGCTATTTG 57.782 34.615 5.23 0.00 0.00 2.32
1880 1963 9.499479 CATAGGAATTCTCACATAACTGCTATT 57.501 33.333 5.23 0.00 0.00 1.73
1881 1964 8.654997 ACATAGGAATTCTCACATAACTGCTAT 58.345 33.333 5.23 0.00 0.00 2.97
1882 1965 8.023021 ACATAGGAATTCTCACATAACTGCTA 57.977 34.615 5.23 0.00 0.00 3.49
1883 1966 6.893583 ACATAGGAATTCTCACATAACTGCT 58.106 36.000 5.23 0.00 0.00 4.24
1884 1967 7.559590 AACATAGGAATTCTCACATAACTGC 57.440 36.000 5.23 0.00 0.00 4.40
1885 1968 9.778993 CAAAACATAGGAATTCTCACATAACTG 57.221 33.333 5.23 0.00 0.00 3.16
1886 1969 8.462016 GCAAAACATAGGAATTCTCACATAACT 58.538 33.333 5.23 0.00 0.00 2.24
1887 1970 8.462016 AGCAAAACATAGGAATTCTCACATAAC 58.538 33.333 5.23 0.00 0.00 1.89
1888 1971 8.579850 AGCAAAACATAGGAATTCTCACATAA 57.420 30.769 5.23 0.00 0.00 1.90
1889 1972 9.851686 ATAGCAAAACATAGGAATTCTCACATA 57.148 29.630 5.23 0.00 0.00 2.29
1890 1973 8.757982 ATAGCAAAACATAGGAATTCTCACAT 57.242 30.769 5.23 0.00 0.00 3.21
1891 1974 7.011389 CGATAGCAAAACATAGGAATTCTCACA 59.989 37.037 5.23 0.00 0.00 3.58
1892 1975 7.348201 CGATAGCAAAACATAGGAATTCTCAC 58.652 38.462 5.23 0.00 0.00 3.51
1893 1976 6.483307 CCGATAGCAAAACATAGGAATTCTCA 59.517 38.462 5.23 0.00 0.00 3.27
1894 1977 6.483640 ACCGATAGCAAAACATAGGAATTCTC 59.516 38.462 5.23 0.00 0.00 2.87
1895 1978 6.260936 CACCGATAGCAAAACATAGGAATTCT 59.739 38.462 5.23 0.00 0.00 2.40
1896 1979 6.430451 CACCGATAGCAAAACATAGGAATTC 58.570 40.000 0.00 0.00 0.00 2.17
1897 1980 5.299279 CCACCGATAGCAAAACATAGGAATT 59.701 40.000 0.00 0.00 0.00 2.17
1898 1981 4.821805 CCACCGATAGCAAAACATAGGAAT 59.178 41.667 0.00 0.00 0.00 3.01
1899 1982 4.196193 CCACCGATAGCAAAACATAGGAA 58.804 43.478 0.00 0.00 0.00 3.36
1900 1983 3.433031 CCCACCGATAGCAAAACATAGGA 60.433 47.826 0.00 0.00 0.00 2.94
1901 1984 2.878406 CCCACCGATAGCAAAACATAGG 59.122 50.000 0.00 0.00 0.00 2.57
1902 1985 3.804036 TCCCACCGATAGCAAAACATAG 58.196 45.455 0.00 0.00 0.00 2.23
1903 1986 3.916359 TCCCACCGATAGCAAAACATA 57.084 42.857 0.00 0.00 0.00 2.29
1904 1987 2.799126 TCCCACCGATAGCAAAACAT 57.201 45.000 0.00 0.00 0.00 2.71
1905 1988 2.799126 ATCCCACCGATAGCAAAACA 57.201 45.000 0.00 0.00 0.00 2.83
1906 1989 3.442273 TGAAATCCCACCGATAGCAAAAC 59.558 43.478 0.00 0.00 0.00 2.43
1907 1990 3.442273 GTGAAATCCCACCGATAGCAAAA 59.558 43.478 0.00 0.00 0.00 2.44
1908 1991 3.013921 GTGAAATCCCACCGATAGCAAA 58.986 45.455 0.00 0.00 0.00 3.68
1909 1992 2.238646 AGTGAAATCCCACCGATAGCAA 59.761 45.455 0.00 0.00 37.76 3.91
1910 1993 1.837439 AGTGAAATCCCACCGATAGCA 59.163 47.619 0.00 0.00 37.76 3.49
1911 1994 2.614057 CAAGTGAAATCCCACCGATAGC 59.386 50.000 0.00 0.00 37.76 2.97
1912 1995 3.871594 GTCAAGTGAAATCCCACCGATAG 59.128 47.826 0.00 0.00 37.76 2.08
1913 1996 3.262151 TGTCAAGTGAAATCCCACCGATA 59.738 43.478 0.00 0.00 37.76 2.92
1914 1997 2.039746 TGTCAAGTGAAATCCCACCGAT 59.960 45.455 0.00 0.00 37.76 4.18
1915 1998 1.418264 TGTCAAGTGAAATCCCACCGA 59.582 47.619 0.00 0.00 37.76 4.69
1916 1999 1.535462 GTGTCAAGTGAAATCCCACCG 59.465 52.381 0.00 0.00 37.76 4.94
1917 2000 1.535462 CGTGTCAAGTGAAATCCCACC 59.465 52.381 0.00 0.00 37.76 4.61
1918 2001 1.535462 CCGTGTCAAGTGAAATCCCAC 59.465 52.381 0.00 0.00 37.32 4.61
1919 2002 1.890876 CCGTGTCAAGTGAAATCCCA 58.109 50.000 0.00 0.00 0.00 4.37
1920 2003 0.521735 GCCGTGTCAAGTGAAATCCC 59.478 55.000 0.00 0.00 0.00 3.85
1921 2004 1.234821 TGCCGTGTCAAGTGAAATCC 58.765 50.000 0.00 0.00 0.00 3.01
1922 2005 2.159517 GGATGCCGTGTCAAGTGAAATC 60.160 50.000 0.00 0.00 0.00 2.17
1923 2006 1.812571 GGATGCCGTGTCAAGTGAAAT 59.187 47.619 0.00 0.00 0.00 2.17
1924 2007 1.202758 AGGATGCCGTGTCAAGTGAAA 60.203 47.619 0.00 0.00 0.00 2.69
1925 2008 0.396435 AGGATGCCGTGTCAAGTGAA 59.604 50.000 0.00 0.00 0.00 3.18
1926 2009 1.262417 TAGGATGCCGTGTCAAGTGA 58.738 50.000 0.00 0.00 0.00 3.41
1927 2010 2.159043 AGATAGGATGCCGTGTCAAGTG 60.159 50.000 0.00 0.00 0.00 3.16
1928 2011 2.111384 AGATAGGATGCCGTGTCAAGT 58.889 47.619 0.00 0.00 0.00 3.16
1929 2012 2.159043 ACAGATAGGATGCCGTGTCAAG 60.159 50.000 0.00 0.00 0.00 3.02
1930 2013 1.831106 ACAGATAGGATGCCGTGTCAA 59.169 47.619 0.00 0.00 0.00 3.18
1931 2014 1.485124 ACAGATAGGATGCCGTGTCA 58.515 50.000 0.00 0.00 0.00 3.58
1932 2015 2.623889 ACTACAGATAGGATGCCGTGTC 59.376 50.000 0.00 0.00 32.08 3.67
1933 2016 2.667470 ACTACAGATAGGATGCCGTGT 58.333 47.619 0.00 0.00 32.08 4.49
1934 2017 3.068165 TGAACTACAGATAGGATGCCGTG 59.932 47.826 0.00 0.00 32.08 4.94
1935 2018 3.296854 TGAACTACAGATAGGATGCCGT 58.703 45.455 0.00 0.00 32.08 5.68
1936 2019 4.527509 ATGAACTACAGATAGGATGCCG 57.472 45.455 0.00 0.00 32.08 5.69
1937 2020 7.255277 GGAAAAATGAACTACAGATAGGATGCC 60.255 40.741 0.00 0.00 32.08 4.40
1938 2021 7.500559 AGGAAAAATGAACTACAGATAGGATGC 59.499 37.037 0.00 0.00 32.08 3.91
1939 2022 8.834465 CAGGAAAAATGAACTACAGATAGGATG 58.166 37.037 0.00 0.00 32.08 3.51
1940 2023 8.552296 ACAGGAAAAATGAACTACAGATAGGAT 58.448 33.333 0.00 0.00 32.08 3.24
1941 2024 7.918076 ACAGGAAAAATGAACTACAGATAGGA 58.082 34.615 0.00 0.00 32.08 2.94
1942 2025 8.567285 AACAGGAAAAATGAACTACAGATAGG 57.433 34.615 0.00 0.00 32.08 2.57
1944 2027 9.793259 AGAAACAGGAAAAATGAACTACAGATA 57.207 29.630 0.00 0.00 0.00 1.98
1945 2028 8.697507 AGAAACAGGAAAAATGAACTACAGAT 57.302 30.769 0.00 0.00 0.00 2.90
1946 2029 9.052759 GTAGAAACAGGAAAAATGAACTACAGA 57.947 33.333 0.00 0.00 0.00 3.41
1947 2030 8.836413 TGTAGAAACAGGAAAAATGAACTACAG 58.164 33.333 0.00 0.00 34.00 2.74
1948 2031 8.617809 GTGTAGAAACAGGAAAAATGAACTACA 58.382 33.333 0.00 0.00 35.91 2.74
1949 2032 8.837389 AGTGTAGAAACAGGAAAAATGAACTAC 58.163 33.333 0.00 0.00 35.91 2.73
1950 2033 8.974060 AGTGTAGAAACAGGAAAAATGAACTA 57.026 30.769 0.00 0.00 35.91 2.24
1951 2034 7.881775 AGTGTAGAAACAGGAAAAATGAACT 57.118 32.000 0.00 0.00 35.91 3.01
1956 2039 9.802039 TGGTATAAGTGTAGAAACAGGAAAAAT 57.198 29.630 0.00 0.00 35.91 1.82
1957 2040 9.629878 TTGGTATAAGTGTAGAAACAGGAAAAA 57.370 29.630 0.00 0.00 35.91 1.94
1958 2041 9.802039 ATTGGTATAAGTGTAGAAACAGGAAAA 57.198 29.630 0.00 0.00 35.91 2.29
1959 2042 9.444600 GATTGGTATAAGTGTAGAAACAGGAAA 57.555 33.333 0.00 0.00 35.91 3.13
1960 2043 8.044908 GGATTGGTATAAGTGTAGAAACAGGAA 58.955 37.037 0.00 0.00 35.91 3.36
1961 2044 7.402071 AGGATTGGTATAAGTGTAGAAACAGGA 59.598 37.037 0.00 0.00 35.91 3.86
1962 2045 7.495934 CAGGATTGGTATAAGTGTAGAAACAGG 59.504 40.741 0.00 0.00 35.91 4.00
1963 2046 8.041323 ACAGGATTGGTATAAGTGTAGAAACAG 58.959 37.037 0.00 0.00 35.91 3.16
1964 2047 7.913789 ACAGGATTGGTATAAGTGTAGAAACA 58.086 34.615 0.00 0.00 0.00 2.83
1965 2048 9.880157 TTACAGGATTGGTATAAGTGTAGAAAC 57.120 33.333 0.00 0.00 0.00 2.78
1968 2051 9.880157 GTTTTACAGGATTGGTATAAGTGTAGA 57.120 33.333 0.00 0.00 0.00 2.59
1969 2052 9.661563 TGTTTTACAGGATTGGTATAAGTGTAG 57.338 33.333 0.00 0.00 0.00 2.74
1971 2054 8.927675 TTGTTTTACAGGATTGGTATAAGTGT 57.072 30.769 0.00 0.00 0.00 3.55
1976 2059 9.184523 CCTCATTTGTTTTACAGGATTGGTATA 57.815 33.333 0.00 0.00 0.00 1.47
1977 2060 7.363793 GCCTCATTTGTTTTACAGGATTGGTAT 60.364 37.037 0.00 0.00 0.00 2.73
1978 2061 6.071616 GCCTCATTTGTTTTACAGGATTGGTA 60.072 38.462 0.00 0.00 0.00 3.25
1979 2062 5.279456 GCCTCATTTGTTTTACAGGATTGGT 60.279 40.000 0.00 0.00 0.00 3.67
1980 2063 5.170748 GCCTCATTTGTTTTACAGGATTGG 58.829 41.667 0.00 0.00 0.00 3.16
1981 2064 5.047092 AGGCCTCATTTGTTTTACAGGATTG 60.047 40.000 0.00 0.00 0.00 2.67
1982 2065 5.086621 AGGCCTCATTTGTTTTACAGGATT 58.913 37.500 0.00 0.00 0.00 3.01
1983 2066 4.677182 AGGCCTCATTTGTTTTACAGGAT 58.323 39.130 0.00 0.00 0.00 3.24
1984 2067 4.112634 AGGCCTCATTTGTTTTACAGGA 57.887 40.909 0.00 0.00 0.00 3.86
1985 2068 4.871933 AAGGCCTCATTTGTTTTACAGG 57.128 40.909 5.23 0.00 0.00 4.00
1986 2069 5.622233 GCCTAAGGCCTCATTTGTTTTACAG 60.622 44.000 5.23 0.00 44.06 2.74
1987 2070 4.219725 GCCTAAGGCCTCATTTGTTTTACA 59.780 41.667 5.23 0.00 44.06 2.41
1988 2071 4.744570 GCCTAAGGCCTCATTTGTTTTAC 58.255 43.478 5.23 0.00 44.06 2.01
1990 2073 3.961480 GCCTAAGGCCTCATTTGTTTT 57.039 42.857 5.23 0.00 44.06 2.43
2003 2086 5.358160 CCTATGAACCAAAAGAAGCCTAAGG 59.642 44.000 0.00 0.00 0.00 2.69
2004 2087 6.180472 TCCTATGAACCAAAAGAAGCCTAAG 58.820 40.000 0.00 0.00 0.00 2.18
2005 2088 6.134535 TCCTATGAACCAAAAGAAGCCTAA 57.865 37.500 0.00 0.00 0.00 2.69
2006 2089 5.772393 TCCTATGAACCAAAAGAAGCCTA 57.228 39.130 0.00 0.00 0.00 3.93
2007 2090 4.657814 TCCTATGAACCAAAAGAAGCCT 57.342 40.909 0.00 0.00 0.00 4.58
2008 2091 5.532779 CCTATCCTATGAACCAAAAGAAGCC 59.467 44.000 0.00 0.00 0.00 4.35
2009 2092 6.357367 TCCTATCCTATGAACCAAAAGAAGC 58.643 40.000 0.00 0.00 0.00 3.86
2010 2093 8.986929 AATCCTATCCTATGAACCAAAAGAAG 57.013 34.615 0.00 0.00 0.00 2.85
2013 2096 9.155975 CGATAATCCTATCCTATGAACCAAAAG 57.844 37.037 0.00 0.00 31.68 2.27
2014 2097 8.656806 ACGATAATCCTATCCTATGAACCAAAA 58.343 33.333 0.00 0.00 31.68 2.44
2015 2098 8.202461 ACGATAATCCTATCCTATGAACCAAA 57.798 34.615 0.00 0.00 31.68 3.28
2016 2099 7.792364 ACGATAATCCTATCCTATGAACCAA 57.208 36.000 0.00 0.00 31.68 3.67
2017 2100 7.560262 CCTACGATAATCCTATCCTATGAACCA 59.440 40.741 0.00 0.00 31.68 3.67
2018 2101 7.778853 TCCTACGATAATCCTATCCTATGAACC 59.221 40.741 0.00 0.00 31.68 3.62
2019 2102 8.749026 TCCTACGATAATCCTATCCTATGAAC 57.251 38.462 0.00 0.00 31.68 3.18
2020 2103 9.937876 ATTCCTACGATAATCCTATCCTATGAA 57.062 33.333 0.00 0.00 31.68 2.57
2024 2107 9.234086 TCCTATTCCTACGATAATCCTATCCTA 57.766 37.037 0.00 0.00 31.68 2.94
2025 2108 8.115490 TCCTATTCCTACGATAATCCTATCCT 57.885 38.462 0.00 0.00 31.68 3.24
2026 2109 8.763984 TTCCTATTCCTACGATAATCCTATCC 57.236 38.462 0.00 0.00 31.68 2.59
2030 2113 9.726438 CAAAATTCCTATTCCTACGATAATCCT 57.274 33.333 0.00 0.00 0.00 3.24
2031 2114 9.503399 ACAAAATTCCTATTCCTACGATAATCC 57.497 33.333 0.00 0.00 0.00 3.01
2037 2120 9.947433 TTTTCTACAAAATTCCTATTCCTACGA 57.053 29.630 0.00 0.00 0.00 3.43
2092 2175 7.747155 TCTCGTTTCCTATTCCTACTCATAG 57.253 40.000 0.00 0.00 0.00 2.23
2093 2176 7.724506 ACATCTCGTTTCCTATTCCTACTCATA 59.275 37.037 0.00 0.00 0.00 2.15
2094 2177 6.551601 ACATCTCGTTTCCTATTCCTACTCAT 59.448 38.462 0.00 0.00 0.00 2.90
2095 2178 5.892119 ACATCTCGTTTCCTATTCCTACTCA 59.108 40.000 0.00 0.00 0.00 3.41
2096 2179 6.039493 TGACATCTCGTTTCCTATTCCTACTC 59.961 42.308 0.00 0.00 0.00 2.59
2097 2180 5.892119 TGACATCTCGTTTCCTATTCCTACT 59.108 40.000 0.00 0.00 0.00 2.57
2098 2181 6.145338 TGACATCTCGTTTCCTATTCCTAC 57.855 41.667 0.00 0.00 0.00 3.18
2099 2182 6.978674 ATGACATCTCGTTTCCTATTCCTA 57.021 37.500 0.00 0.00 0.00 2.94
2100 2183 5.878406 ATGACATCTCGTTTCCTATTCCT 57.122 39.130 0.00 0.00 0.00 3.36
2101 2184 6.238484 CCAAATGACATCTCGTTTCCTATTCC 60.238 42.308 0.00 0.00 33.97 3.01
2102 2185 6.316390 ACCAAATGACATCTCGTTTCCTATTC 59.684 38.462 0.00 0.00 33.97 1.75
2103 2186 6.180472 ACCAAATGACATCTCGTTTCCTATT 58.820 36.000 0.00 0.00 33.97 1.73
2104 2187 5.745227 ACCAAATGACATCTCGTTTCCTAT 58.255 37.500 0.00 0.00 33.97 2.57
2105 2188 5.160607 ACCAAATGACATCTCGTTTCCTA 57.839 39.130 0.00 0.00 33.97 2.94
2106 2189 4.021102 ACCAAATGACATCTCGTTTCCT 57.979 40.909 0.00 0.00 33.97 3.36
2107 2190 4.215399 TCAACCAAATGACATCTCGTTTCC 59.785 41.667 0.00 0.00 33.97 3.13
2108 2191 5.356882 TCAACCAAATGACATCTCGTTTC 57.643 39.130 0.00 0.00 33.97 2.78
2126 2209 7.408910 CAATGGAAAAATTCTTTGGTGTCAAC 58.591 34.615 0.00 0.00 31.78 3.18
2127 2210 6.038050 GCAATGGAAAAATTCTTTGGTGTCAA 59.962 34.615 0.00 0.00 0.00 3.18
2128 2211 5.526846 GCAATGGAAAAATTCTTTGGTGTCA 59.473 36.000 0.00 0.00 0.00 3.58
2129 2212 5.333263 CGCAATGGAAAAATTCTTTGGTGTC 60.333 40.000 0.00 0.00 0.00 3.67
2130 2213 4.511082 CGCAATGGAAAAATTCTTTGGTGT 59.489 37.500 0.00 0.00 0.00 4.16
2131 2214 4.511082 ACGCAATGGAAAAATTCTTTGGTG 59.489 37.500 0.00 0.00 0.00 4.17
2132 2215 4.702831 ACGCAATGGAAAAATTCTTTGGT 58.297 34.783 0.00 0.00 0.00 3.67
2133 2216 4.990426 AGACGCAATGGAAAAATTCTTTGG 59.010 37.500 0.00 0.00 0.00 3.28
2134 2217 6.308766 CCTAGACGCAATGGAAAAATTCTTTG 59.691 38.462 0.00 0.00 0.00 2.77
2135 2218 6.389906 CCTAGACGCAATGGAAAAATTCTTT 58.610 36.000 0.00 0.00 0.00 2.52
2136 2219 5.622233 GCCTAGACGCAATGGAAAAATTCTT 60.622 40.000 0.00 0.00 0.00 2.52
2137 2220 4.142381 GCCTAGACGCAATGGAAAAATTCT 60.142 41.667 0.00 0.00 0.00 2.40
2138 2221 4.105486 GCCTAGACGCAATGGAAAAATTC 58.895 43.478 0.00 0.00 0.00 2.17
2139 2222 3.763897 AGCCTAGACGCAATGGAAAAATT 59.236 39.130 0.00 0.00 0.00 1.82
2140 2223 3.356290 AGCCTAGACGCAATGGAAAAAT 58.644 40.909 0.00 0.00 0.00 1.82
2141 2224 2.747446 GAGCCTAGACGCAATGGAAAAA 59.253 45.455 0.00 0.00 0.00 1.94
2142 2225 2.290008 TGAGCCTAGACGCAATGGAAAA 60.290 45.455 0.00 0.00 0.00 2.29
2143 2226 1.277842 TGAGCCTAGACGCAATGGAAA 59.722 47.619 0.00 0.00 0.00 3.13
2144 2227 0.901827 TGAGCCTAGACGCAATGGAA 59.098 50.000 0.00 0.00 0.00 3.53
2145 2228 1.123077 ATGAGCCTAGACGCAATGGA 58.877 50.000 0.00 0.00 0.00 3.41
2146 2229 1.959042 AATGAGCCTAGACGCAATGG 58.041 50.000 0.00 0.00 0.00 3.16
2147 2230 4.361451 AAAAATGAGCCTAGACGCAATG 57.639 40.909 0.00 0.00 0.00 2.82
2148 2231 6.699575 AATAAAAATGAGCCTAGACGCAAT 57.300 33.333 0.00 0.00 0.00 3.56
2149 2232 6.509418 AAATAAAAATGAGCCTAGACGCAA 57.491 33.333 0.00 0.00 0.00 4.85
2150 2233 6.404293 GGAAAATAAAAATGAGCCTAGACGCA 60.404 38.462 0.00 0.00 0.00 5.24
2151 2234 5.971792 GGAAAATAAAAATGAGCCTAGACGC 59.028 40.000 0.00 0.00 0.00 5.19
2152 2235 6.094881 TGGGAAAATAAAAATGAGCCTAGACG 59.905 38.462 0.00 0.00 0.00 4.18
2153 2236 7.404671 TGGGAAAATAAAAATGAGCCTAGAC 57.595 36.000 0.00 0.00 0.00 2.59
2154 2237 7.838696 TCATGGGAAAATAAAAATGAGCCTAGA 59.161 33.333 0.00 0.00 0.00 2.43
2155 2238 8.010733 TCATGGGAAAATAAAAATGAGCCTAG 57.989 34.615 0.00 0.00 0.00 3.02
2156 2239 7.969690 TCATGGGAAAATAAAAATGAGCCTA 57.030 32.000 0.00 0.00 0.00 3.93
2157 2240 6.872585 TCATGGGAAAATAAAAATGAGCCT 57.127 33.333 0.00 0.00 0.00 4.58
2158 2241 7.920160 TTTCATGGGAAAATAAAAATGAGCC 57.080 32.000 0.00 0.00 39.96 4.70
2171 2254 9.092338 CCATATTTCTCCATATTTCATGGGAAA 57.908 33.333 15.79 15.79 46.36 3.13
2172 2255 8.455309 TCCATATTTCTCCATATTTCATGGGAA 58.545 33.333 3.55 3.93 39.60 3.97
2173 2256 7.999042 TCCATATTTCTCCATATTTCATGGGA 58.001 34.615 3.55 0.00 39.60 4.37
2174 2257 7.341256 CCTCCATATTTCTCCATATTTCATGGG 59.659 40.741 3.55 0.00 39.60 4.00
2175 2258 8.111545 TCCTCCATATTTCTCCATATTTCATGG 58.888 37.037 0.00 0.00 40.48 3.66
2176 2259 9.696572 ATCCTCCATATTTCTCCATATTTCATG 57.303 33.333 0.00 0.00 0.00 3.07
2179 2262 9.844257 CCTATCCTCCATATTTCTCCATATTTC 57.156 37.037 0.00 0.00 0.00 2.17
2180 2263 9.580103 TCCTATCCTCCATATTTCTCCATATTT 57.420 33.333 0.00 0.00 0.00 1.40
2181 2264 9.580103 TTCCTATCCTCCATATTTCTCCATATT 57.420 33.333 0.00 0.00 0.00 1.28
2182 2265 8.997734 GTTCCTATCCTCCATATTTCTCCATAT 58.002 37.037 0.00 0.00 0.00 1.78
2183 2266 7.403231 GGTTCCTATCCTCCATATTTCTCCATA 59.597 40.741 0.00 0.00 0.00 2.74
2184 2267 6.216456 GGTTCCTATCCTCCATATTTCTCCAT 59.784 42.308 0.00 0.00 0.00 3.41
2185 2268 5.548056 GGTTCCTATCCTCCATATTTCTCCA 59.452 44.000 0.00 0.00 0.00 3.86
2186 2269 6.056090 GGTTCCTATCCTCCATATTTCTCC 57.944 45.833 0.00 0.00 0.00 3.71



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.