Multiple sequence alignment - TraesCS2D01G246400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G246400 chr2D 100.000 2513 0 0 1 2513 287236161 287238673 0.000000e+00 4641.0
1 TraesCS2D01G246400 chr2D 97.015 67 1 1 1 67 334120364 334120299 7.350000e-21 111.0
2 TraesCS2D01G246400 chr2D 95.522 67 3 0 1 67 342419276 342419210 9.510000e-20 108.0
3 TraesCS2D01G246400 chr2B 91.572 1851 66 20 686 2508 325628024 325629812 0.000000e+00 2471.0
4 TraesCS2D01G246400 chr2B 96.970 66 1 1 5 69 603711214 603711149 2.640000e-20 110.0
5 TraesCS2D01G246400 chr2B 95.161 62 3 0 6 67 451399336 451399397 5.720000e-17 99.0
6 TraesCS2D01G246400 chr4D 92.000 175 8 4 508 678 301014440 301014612 8.980000e-60 241.0
7 TraesCS2D01G246400 chr1D 90.374 187 11 1 508 687 276528972 276528786 3.230000e-59 239.0
8 TraesCS2D01G246400 chr1D 96.825 63 2 0 5 67 397111518 397111580 3.420000e-19 106.0
9 TraesCS2D01G246400 chr1A 88.083 193 17 2 500 687 393460939 393460748 9.050000e-55 224.0
10 TraesCS2D01G246400 chr1A 97.015 67 2 0 1 67 122484655 122484589 2.040000e-21 113.0
11 TraesCS2D01G246400 chr1A 95.652 46 2 0 462 507 320485673 320485628 9.640000e-10 75.0
12 TraesCS2D01G246400 chr6B 87.302 189 21 3 500 687 118779484 118779670 1.960000e-51 213.0
13 TraesCS2D01G246400 chrUn 89.412 170 14 3 518 687 320491402 320491567 7.040000e-51 211.0
14 TraesCS2D01G246400 chrUn 88.824 170 13 4 518 687 320678901 320679064 1.180000e-48 204.0
15 TraesCS2D01G246400 chrUn 87.302 63 7 1 452 513 71515090 71515152 1.250000e-08 71.3
16 TraesCS2D01G246400 chr4B 88.304 171 12 5 508 671 321213459 321213628 5.480000e-47 198.0
17 TraesCS2D01G246400 chr4B 95.522 67 3 0 1 67 382138589 382138523 9.510000e-20 108.0
18 TraesCS2D01G246400 chr7A 87.135 171 17 4 508 678 117435337 117435502 3.300000e-44 189.0
19 TraesCS2D01G246400 chr7A 93.878 49 3 0 459 507 185591568 185591616 9.640000e-10 75.0
20 TraesCS2D01G246400 chr1B 86.034 179 17 5 508 686 121343907 121344077 4.270000e-43 185.0
21 TraesCS2D01G246400 chr1B 88.710 62 4 3 453 513 635845628 635845569 3.470000e-09 73.1
22 TraesCS2D01G246400 chr5B 95.522 67 3 0 1 67 248598478 248598412 9.510000e-20 108.0
23 TraesCS2D01G246400 chr6D 94.030 67 4 0 1 67 156368926 156368860 4.420000e-18 102.0
24 TraesCS2D01G246400 chr5D 95.652 46 2 0 462 507 24356334 24356379 9.640000e-10 75.0
25 TraesCS2D01G246400 chr5A 94.000 50 1 2 461 509 17812348 17812396 9.640000e-10 75.0
26 TraesCS2D01G246400 chr5A 95.652 46 2 0 462 507 230543090 230543135 9.640000e-10 75.0
27 TraesCS2D01G246400 chr5A 90.741 54 5 0 454 507 561552012 561552065 3.470000e-09 73.1
28 TraesCS2D01G246400 chr3A 88.525 61 6 1 446 505 731891363 731891303 3.470000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G246400 chr2D 287236161 287238673 2512 False 4641 4641 100.000 1 2513 1 chr2D.!!$F1 2512
1 TraesCS2D01G246400 chr2B 325628024 325629812 1788 False 2471 2471 91.572 686 2508 1 chr2B.!!$F1 1822

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
336 337 0.028505 GATGGCTACATGCTGCGTTG 59.971 55.0 0.0 0.0 42.39 4.10 F
835 836 0.034767 TCGCCTCGTCTTCCTCCTAA 60.035 55.0 0.0 0.0 0.00 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1254 1257 0.727122 GTACGACGACCTTGGTGACG 60.727 60.0 0.00 5.05 0.00 4.35 R
2344 2371 0.909610 TAGGCCTCTCACCAACCTGG 60.910 60.0 9.68 0.00 45.02 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.453567 AACTTCTGTCATTTTAGCAACCC 57.546 39.130 0.00 0.00 0.00 4.11
25 26 4.469657 ACTTCTGTCATTTTAGCAACCCA 58.530 39.130 0.00 0.00 0.00 4.51
26 27 5.079643 ACTTCTGTCATTTTAGCAACCCAT 58.920 37.500 0.00 0.00 0.00 4.00
27 28 5.183904 ACTTCTGTCATTTTAGCAACCCATC 59.816 40.000 0.00 0.00 0.00 3.51
28 29 4.661222 TCTGTCATTTTAGCAACCCATCA 58.339 39.130 0.00 0.00 0.00 3.07
29 30 5.263599 TCTGTCATTTTAGCAACCCATCAT 58.736 37.500 0.00 0.00 0.00 2.45
30 31 5.357878 TCTGTCATTTTAGCAACCCATCATC 59.642 40.000 0.00 0.00 0.00 2.92
31 32 5.263599 TGTCATTTTAGCAACCCATCATCT 58.736 37.500 0.00 0.00 0.00 2.90
32 33 6.422333 TGTCATTTTAGCAACCCATCATCTA 58.578 36.000 0.00 0.00 0.00 1.98
33 34 6.889177 TGTCATTTTAGCAACCCATCATCTAA 59.111 34.615 0.00 0.00 0.00 2.10
34 35 7.560991 TGTCATTTTAGCAACCCATCATCTAAT 59.439 33.333 0.00 0.00 0.00 1.73
35 36 9.066892 GTCATTTTAGCAACCCATCATCTAATA 57.933 33.333 0.00 0.00 0.00 0.98
36 37 9.639563 TCATTTTAGCAACCCATCATCTAATAA 57.360 29.630 0.00 0.00 0.00 1.40
37 38 9.683069 CATTTTAGCAACCCATCATCTAATAAC 57.317 33.333 0.00 0.00 0.00 1.89
38 39 9.646522 ATTTTAGCAACCCATCATCTAATAACT 57.353 29.630 0.00 0.00 0.00 2.24
40 41 9.555727 TTTAGCAACCCATCATCTAATAACTAC 57.444 33.333 0.00 0.00 0.00 2.73
41 42 7.380423 AGCAACCCATCATCTAATAACTACT 57.620 36.000 0.00 0.00 0.00 2.57
42 43 7.445945 AGCAACCCATCATCTAATAACTACTC 58.554 38.462 0.00 0.00 0.00 2.59
43 44 7.291182 AGCAACCCATCATCTAATAACTACTCT 59.709 37.037 0.00 0.00 0.00 3.24
44 45 8.585881 GCAACCCATCATCTAATAACTACTCTA 58.414 37.037 0.00 0.00 0.00 2.43
45 46 9.915629 CAACCCATCATCTAATAACTACTCTAC 57.084 37.037 0.00 0.00 0.00 2.59
46 47 9.656323 AACCCATCATCTAATAACTACTCTACA 57.344 33.333 0.00 0.00 0.00 2.74
47 48 9.656323 ACCCATCATCTAATAACTACTCTACAA 57.344 33.333 0.00 0.00 0.00 2.41
55 56 9.982651 TCTAATAACTACTCTACAATGCATTCC 57.017 33.333 9.53 0.00 0.00 3.01
56 57 9.209175 CTAATAACTACTCTACAATGCATTCCC 57.791 37.037 9.53 0.00 0.00 3.97
57 58 5.700402 AACTACTCTACAATGCATTCCCT 57.300 39.130 9.53 0.00 0.00 4.20
58 59 5.700402 ACTACTCTACAATGCATTCCCTT 57.300 39.130 9.53 0.00 0.00 3.95
59 60 6.808321 ACTACTCTACAATGCATTCCCTTA 57.192 37.500 9.53 0.00 0.00 2.69
60 61 6.821388 ACTACTCTACAATGCATTCCCTTAG 58.179 40.000 9.53 8.05 0.00 2.18
61 62 5.041191 ACTCTACAATGCATTCCCTTAGG 57.959 43.478 9.53 0.00 0.00 2.69
62 63 3.817647 CTCTACAATGCATTCCCTTAGGC 59.182 47.826 9.53 0.00 0.00 3.93
63 64 1.780503 ACAATGCATTCCCTTAGGCC 58.219 50.000 9.53 0.00 0.00 5.19
64 65 1.043022 CAATGCATTCCCTTAGGCCC 58.957 55.000 9.53 0.00 0.00 5.80
65 66 0.636101 AATGCATTCCCTTAGGCCCA 59.364 50.000 5.99 0.00 0.00 5.36
66 67 0.636101 ATGCATTCCCTTAGGCCCAA 59.364 50.000 0.00 0.00 0.00 4.12
67 68 0.636101 TGCATTCCCTTAGGCCCAAT 59.364 50.000 0.00 0.00 0.00 3.16
68 69 1.856259 TGCATTCCCTTAGGCCCAATA 59.144 47.619 0.00 0.00 0.00 1.90
69 70 2.158475 TGCATTCCCTTAGGCCCAATAG 60.158 50.000 0.00 0.00 0.00 1.73
70 71 2.158460 GCATTCCCTTAGGCCCAATAGT 60.158 50.000 0.00 0.00 0.00 2.12
71 72 3.691311 GCATTCCCTTAGGCCCAATAGTT 60.691 47.826 0.00 0.00 0.00 2.24
72 73 4.447180 GCATTCCCTTAGGCCCAATAGTTA 60.447 45.833 0.00 0.00 0.00 2.24
73 74 5.752030 GCATTCCCTTAGGCCCAATAGTTAT 60.752 44.000 0.00 0.00 0.00 1.89
74 75 4.993705 TCCCTTAGGCCCAATAGTTATG 57.006 45.455 0.00 0.00 0.00 1.90
75 76 3.073946 TCCCTTAGGCCCAATAGTTATGC 59.926 47.826 0.00 0.00 0.00 3.14
76 77 3.074412 CCTTAGGCCCAATAGTTATGCG 58.926 50.000 0.00 0.00 0.00 4.73
77 78 3.496160 CCTTAGGCCCAATAGTTATGCGT 60.496 47.826 0.00 0.00 0.00 5.24
78 79 2.729028 AGGCCCAATAGTTATGCGTT 57.271 45.000 0.00 0.00 0.00 4.84
79 80 2.297701 AGGCCCAATAGTTATGCGTTG 58.702 47.619 0.00 0.00 0.00 4.10
80 81 2.092646 AGGCCCAATAGTTATGCGTTGA 60.093 45.455 0.00 0.00 0.00 3.18
81 82 2.032924 GGCCCAATAGTTATGCGTTGAC 59.967 50.000 0.00 0.00 0.00 3.18
82 83 2.680841 GCCCAATAGTTATGCGTTGACA 59.319 45.455 0.00 0.00 0.00 3.58
83 84 3.242739 GCCCAATAGTTATGCGTTGACAG 60.243 47.826 0.00 0.00 0.00 3.51
84 85 3.242739 CCCAATAGTTATGCGTTGACAGC 60.243 47.826 0.00 0.00 0.00 4.40
85 86 3.544048 CCAATAGTTATGCGTTGACAGCG 60.544 47.826 7.39 7.39 37.44 5.18
86 87 2.640346 TAGTTATGCGTTGACAGCGA 57.360 45.000 16.35 1.25 37.44 4.93
87 88 2.010145 AGTTATGCGTTGACAGCGAT 57.990 45.000 16.35 8.54 37.44 4.58
88 89 1.660607 AGTTATGCGTTGACAGCGATG 59.339 47.619 16.35 0.00 37.44 3.84
89 90 1.006086 TTATGCGTTGACAGCGATGG 58.994 50.000 16.35 0.00 37.44 3.51
90 91 1.428370 TATGCGTTGACAGCGATGGC 61.428 55.000 16.35 0.86 37.44 4.40
91 92 3.422303 GCGTTGACAGCGATGGCA 61.422 61.111 4.32 4.32 43.41 4.92
92 93 2.780643 CGTTGACAGCGATGGCAG 59.219 61.111 10.12 0.00 43.41 4.85
93 94 2.482374 GTTGACAGCGATGGCAGC 59.518 61.111 10.12 8.94 43.41 5.25
94 95 3.120385 TTGACAGCGATGGCAGCG 61.120 61.111 22.35 22.35 43.41 5.18
95 96 3.588057 TTGACAGCGATGGCAGCGA 62.588 57.895 30.95 3.95 43.41 4.93
96 97 3.260483 GACAGCGATGGCAGCGAG 61.260 66.667 30.95 21.80 43.41 5.03
109 110 2.580867 GCGAGCGGCACACTAGAG 60.581 66.667 1.45 0.00 42.87 2.43
110 111 2.878429 CGAGCGGCACACTAGAGT 59.122 61.111 1.45 0.00 0.00 3.24
124 125 5.836821 CACTAGAGTGCTACAACCATAGA 57.163 43.478 0.00 0.00 39.39 1.98
125 126 5.826586 CACTAGAGTGCTACAACCATAGAG 58.173 45.833 0.00 0.00 39.39 2.43
126 127 5.358442 CACTAGAGTGCTACAACCATAGAGT 59.642 44.000 0.00 0.00 39.39 3.24
127 128 4.727507 AGAGTGCTACAACCATAGAGTG 57.272 45.455 0.00 0.00 0.00 3.51
128 129 4.090090 AGAGTGCTACAACCATAGAGTGT 58.910 43.478 0.00 0.00 0.00 3.55
129 130 4.158764 AGAGTGCTACAACCATAGAGTGTC 59.841 45.833 0.00 0.00 0.00 3.67
130 131 3.119459 AGTGCTACAACCATAGAGTGTCG 60.119 47.826 0.00 0.00 0.00 4.35
131 132 3.086282 TGCTACAACCATAGAGTGTCGA 58.914 45.455 0.00 0.00 0.00 4.20
132 133 3.699538 TGCTACAACCATAGAGTGTCGAT 59.300 43.478 0.00 0.00 0.00 3.59
133 134 4.045104 GCTACAACCATAGAGTGTCGATG 58.955 47.826 0.00 0.00 30.64 3.84
134 135 4.202020 GCTACAACCATAGAGTGTCGATGA 60.202 45.833 0.00 0.00 32.23 2.92
135 136 4.377839 ACAACCATAGAGTGTCGATGAG 57.622 45.455 0.00 0.00 32.23 2.90
136 137 3.119291 CAACCATAGAGTGTCGATGAGC 58.881 50.000 0.00 0.00 32.23 4.26
137 138 2.379005 ACCATAGAGTGTCGATGAGCA 58.621 47.619 0.00 0.00 32.23 4.26
138 139 2.360483 ACCATAGAGTGTCGATGAGCAG 59.640 50.000 0.00 0.00 32.23 4.24
139 140 2.288091 CCATAGAGTGTCGATGAGCAGG 60.288 54.545 0.00 0.00 32.23 4.85
140 141 2.420058 TAGAGTGTCGATGAGCAGGA 57.580 50.000 0.00 0.00 0.00 3.86
141 142 1.102154 AGAGTGTCGATGAGCAGGAG 58.898 55.000 0.00 0.00 0.00 3.69
142 143 0.814457 GAGTGTCGATGAGCAGGAGT 59.186 55.000 0.00 0.00 0.00 3.85
143 144 1.203523 GAGTGTCGATGAGCAGGAGTT 59.796 52.381 0.00 0.00 0.00 3.01
144 145 1.067283 AGTGTCGATGAGCAGGAGTTG 60.067 52.381 0.00 0.00 0.00 3.16
153 154 3.655481 CAGGAGTTGCAACCGGTC 58.345 61.111 25.62 16.36 0.00 4.79
154 155 1.227823 CAGGAGTTGCAACCGGTCA 60.228 57.895 25.62 0.00 0.00 4.02
155 156 0.606401 CAGGAGTTGCAACCGGTCAT 60.606 55.000 25.62 12.04 0.00 3.06
156 157 0.321653 AGGAGTTGCAACCGGTCATC 60.322 55.000 25.62 14.93 0.00 2.92
157 158 1.635663 GGAGTTGCAACCGGTCATCG 61.636 60.000 25.62 0.00 38.88 3.84
158 159 0.669318 GAGTTGCAACCGGTCATCGA 60.669 55.000 25.62 0.00 42.43 3.59
159 160 0.949105 AGTTGCAACCGGTCATCGAC 60.949 55.000 25.62 10.16 42.43 4.20
160 161 2.024868 TTGCAACCGGTCATCGACG 61.025 57.895 8.04 0.00 42.43 5.12
166 167 4.616592 CGGTCATCGACGGATCTG 57.383 61.111 0.00 0.00 42.43 2.90
167 168 1.658717 CGGTCATCGACGGATCTGC 60.659 63.158 0.00 0.00 42.43 4.26
168 169 1.437573 GGTCATCGACGGATCTGCA 59.562 57.895 0.00 0.00 32.65 4.41
169 170 0.179111 GGTCATCGACGGATCTGCAA 60.179 55.000 0.00 0.00 32.65 4.08
170 171 0.924090 GTCATCGACGGATCTGCAAC 59.076 55.000 0.00 0.00 0.00 4.17
171 172 0.179111 TCATCGACGGATCTGCAACC 60.179 55.000 0.00 0.00 0.00 3.77
178 179 2.941210 GGATCTGCAACCGAAACCA 58.059 52.632 0.00 0.00 0.00 3.67
179 180 1.243902 GGATCTGCAACCGAAACCAA 58.756 50.000 0.00 0.00 0.00 3.67
180 181 1.068541 GGATCTGCAACCGAAACCAAC 60.069 52.381 0.00 0.00 0.00 3.77
181 182 0.591170 ATCTGCAACCGAAACCAACG 59.409 50.000 0.00 0.00 0.00 4.10
182 183 0.462225 TCTGCAACCGAAACCAACGA 60.462 50.000 0.00 0.00 0.00 3.85
183 184 0.316689 CTGCAACCGAAACCAACGAC 60.317 55.000 0.00 0.00 0.00 4.34
184 185 1.009335 GCAACCGAAACCAACGACC 60.009 57.895 0.00 0.00 0.00 4.79
185 186 1.716826 GCAACCGAAACCAACGACCA 61.717 55.000 0.00 0.00 0.00 4.02
186 187 0.733729 CAACCGAAACCAACGACCAA 59.266 50.000 0.00 0.00 0.00 3.67
187 188 1.018910 AACCGAAACCAACGACCAAG 58.981 50.000 0.00 0.00 0.00 3.61
188 189 0.816421 ACCGAAACCAACGACCAAGG 60.816 55.000 0.00 0.00 0.00 3.61
189 190 1.512156 CCGAAACCAACGACCAAGGG 61.512 60.000 0.00 0.00 0.00 3.95
190 191 1.512156 CGAAACCAACGACCAAGGGG 61.512 60.000 0.00 0.00 41.29 4.79
191 192 0.179012 GAAACCAACGACCAAGGGGA 60.179 55.000 0.00 0.00 38.05 4.81
192 193 0.179001 AAACCAACGACCAAGGGGAG 60.179 55.000 0.00 0.00 38.05 4.30
193 194 2.064242 AACCAACGACCAAGGGGAGG 62.064 60.000 0.00 0.00 38.05 4.30
194 195 2.526046 CCAACGACCAAGGGGAGGT 61.526 63.158 0.00 0.00 43.46 3.85
195 196 1.454539 CAACGACCAAGGGGAGGTT 59.545 57.895 0.00 0.00 40.09 3.50
196 197 0.605589 CAACGACCAAGGGGAGGTTC 60.606 60.000 0.00 0.00 40.09 3.62
197 198 0.767060 AACGACCAAGGGGAGGTTCT 60.767 55.000 0.00 0.00 40.09 3.01
198 199 0.767060 ACGACCAAGGGGAGGTTCTT 60.767 55.000 0.00 0.00 40.09 2.52
199 200 0.036294 CGACCAAGGGGAGGTTCTTC 60.036 60.000 0.00 0.00 40.09 2.87
200 201 0.036294 GACCAAGGGGAGGTTCTTCG 60.036 60.000 0.00 0.00 40.09 3.79
201 202 1.299976 CCAAGGGGAGGTTCTTCGG 59.700 63.158 0.00 0.00 35.59 4.30
202 203 1.377333 CAAGGGGAGGTTCTTCGGC 60.377 63.158 0.00 0.00 0.00 5.54
203 204 1.846124 AAGGGGAGGTTCTTCGGCA 60.846 57.895 0.00 0.00 0.00 5.69
204 205 1.423794 AAGGGGAGGTTCTTCGGCAA 61.424 55.000 0.00 0.00 0.00 4.52
205 206 1.377333 GGGGAGGTTCTTCGGCAAG 60.377 63.158 0.00 0.00 0.00 4.01
206 207 2.041115 GGGAGGTTCTTCGGCAAGC 61.041 63.158 0.00 0.00 0.00 4.01
207 208 1.302511 GGAGGTTCTTCGGCAAGCA 60.303 57.895 0.00 0.00 0.00 3.91
208 209 0.678048 GGAGGTTCTTCGGCAAGCAT 60.678 55.000 0.00 0.00 0.00 3.79
209 210 0.729690 GAGGTTCTTCGGCAAGCATC 59.270 55.000 0.00 0.00 0.00 3.91
210 211 1.021390 AGGTTCTTCGGCAAGCATCG 61.021 55.000 0.00 0.00 0.00 3.84
211 212 1.226128 GTTCTTCGGCAAGCATCGC 60.226 57.895 0.00 0.00 0.00 4.58
212 213 2.398554 TTCTTCGGCAAGCATCGCC 61.399 57.895 1.17 1.17 46.62 5.54
219 220 3.570638 CAAGCATCGCCGCCTGAG 61.571 66.667 0.00 0.00 0.00 3.35
220 221 3.774528 AAGCATCGCCGCCTGAGA 61.775 61.111 0.00 0.00 0.00 3.27
221 222 3.315142 AAGCATCGCCGCCTGAGAA 62.315 57.895 0.00 0.00 0.00 2.87
222 223 2.803155 AAGCATCGCCGCCTGAGAAA 62.803 55.000 0.00 0.00 0.00 2.52
223 224 2.817423 GCATCGCCGCCTGAGAAAG 61.817 63.158 0.00 0.00 0.00 2.62
224 225 2.512515 ATCGCCGCCTGAGAAAGC 60.513 61.111 0.00 0.00 0.00 3.51
229 230 4.139420 CGCCTGAGAAAGCGCGTG 62.139 66.667 8.43 0.00 46.50 5.34
230 231 4.451652 GCCTGAGAAAGCGCGTGC 62.452 66.667 14.39 14.39 43.24 5.34
231 232 3.793144 CCTGAGAAAGCGCGTGCC 61.793 66.667 19.02 1.89 44.31 5.01
232 233 3.793144 CTGAGAAAGCGCGTGCCC 61.793 66.667 19.02 7.43 44.31 5.36
233 234 4.314440 TGAGAAAGCGCGTGCCCT 62.314 61.111 19.02 12.56 44.31 5.19
234 235 3.793144 GAGAAAGCGCGTGCCCTG 61.793 66.667 19.02 0.00 44.31 4.45
244 245 3.357079 GTGCCCTGCCGTTGTGAG 61.357 66.667 0.00 0.00 0.00 3.51
247 248 4.680237 CCCTGCCGTTGTGAGCGA 62.680 66.667 0.00 0.00 0.00 4.93
248 249 3.114616 CCTGCCGTTGTGAGCGAG 61.115 66.667 0.00 0.00 0.00 5.03
249 250 3.782244 CTGCCGTTGTGAGCGAGC 61.782 66.667 0.00 0.00 0.00 5.03
263 264 4.210304 GAGCGCGCCATCAACGAC 62.210 66.667 30.33 4.35 0.00 4.34
265 266 4.083600 GCGCGCCATCAACGACAA 62.084 61.111 23.24 0.00 0.00 3.18
266 267 2.202171 CGCGCCATCAACGACAAC 60.202 61.111 0.00 0.00 0.00 3.32
267 268 2.667318 CGCGCCATCAACGACAACT 61.667 57.895 0.00 0.00 0.00 3.16
268 269 1.574428 GCGCCATCAACGACAACTT 59.426 52.632 0.00 0.00 0.00 2.66
269 270 0.040425 GCGCCATCAACGACAACTTT 60.040 50.000 0.00 0.00 0.00 2.66
270 271 1.599419 GCGCCATCAACGACAACTTTT 60.599 47.619 0.00 0.00 0.00 2.27
271 272 2.726633 CGCCATCAACGACAACTTTTT 58.273 42.857 0.00 0.00 0.00 1.94
294 295 6.935741 TTTTTCAATGACGGAGAAAGAAGA 57.064 33.333 0.00 0.00 33.35 2.87
295 296 5.924475 TTTCAATGACGGAGAAAGAAGAC 57.076 39.130 0.00 0.00 0.00 3.01
296 297 3.575630 TCAATGACGGAGAAAGAAGACG 58.424 45.455 0.00 0.00 0.00 4.18
297 298 3.254903 TCAATGACGGAGAAAGAAGACGA 59.745 43.478 0.00 0.00 0.00 4.20
298 299 4.082190 TCAATGACGGAGAAAGAAGACGAT 60.082 41.667 0.00 0.00 0.00 3.73
299 300 3.217599 TGACGGAGAAAGAAGACGATG 57.782 47.619 0.00 0.00 0.00 3.84
300 301 2.817844 TGACGGAGAAAGAAGACGATGA 59.182 45.455 0.00 0.00 0.00 2.92
301 302 3.254903 TGACGGAGAAAGAAGACGATGAA 59.745 43.478 0.00 0.00 0.00 2.57
302 303 4.235360 GACGGAGAAAGAAGACGATGAAA 58.765 43.478 0.00 0.00 0.00 2.69
303 304 4.822026 ACGGAGAAAGAAGACGATGAAAT 58.178 39.130 0.00 0.00 0.00 2.17
304 305 5.962433 ACGGAGAAAGAAGACGATGAAATA 58.038 37.500 0.00 0.00 0.00 1.40
305 306 6.037098 ACGGAGAAAGAAGACGATGAAATAG 58.963 40.000 0.00 0.00 0.00 1.73
306 307 5.460419 CGGAGAAAGAAGACGATGAAATAGG 59.540 44.000 0.00 0.00 0.00 2.57
307 308 5.755861 GGAGAAAGAAGACGATGAAATAGGG 59.244 44.000 0.00 0.00 0.00 3.53
308 309 5.119694 AGAAAGAAGACGATGAAATAGGGC 58.880 41.667 0.00 0.00 0.00 5.19
309 310 4.487714 AAGAAGACGATGAAATAGGGCA 57.512 40.909 0.00 0.00 0.00 5.36
310 311 4.696479 AGAAGACGATGAAATAGGGCAT 57.304 40.909 0.00 0.00 0.00 4.40
311 312 5.808366 AGAAGACGATGAAATAGGGCATA 57.192 39.130 0.00 0.00 0.00 3.14
312 313 6.174720 AGAAGACGATGAAATAGGGCATAA 57.825 37.500 0.00 0.00 0.00 1.90
313 314 6.591935 AGAAGACGATGAAATAGGGCATAAA 58.408 36.000 0.00 0.00 0.00 1.40
314 315 7.227156 AGAAGACGATGAAATAGGGCATAAAT 58.773 34.615 0.00 0.00 0.00 1.40
315 316 7.721399 AGAAGACGATGAAATAGGGCATAAATT 59.279 33.333 0.00 0.00 0.00 1.82
316 317 7.206981 AGACGATGAAATAGGGCATAAATTG 57.793 36.000 0.00 0.00 0.00 2.32
317 318 6.207417 AGACGATGAAATAGGGCATAAATTGG 59.793 38.462 0.00 0.00 0.00 3.16
318 319 6.068010 ACGATGAAATAGGGCATAAATTGGA 58.932 36.000 0.00 0.00 0.00 3.53
319 320 6.721208 ACGATGAAATAGGGCATAAATTGGAT 59.279 34.615 0.00 0.00 0.00 3.41
320 321 7.031372 CGATGAAATAGGGCATAAATTGGATG 58.969 38.462 0.00 0.00 0.00 3.51
321 322 6.669125 TGAAATAGGGCATAAATTGGATGG 57.331 37.500 3.48 0.00 0.00 3.51
322 323 5.011943 TGAAATAGGGCATAAATTGGATGGC 59.988 40.000 15.22 15.22 46.33 4.40
323 324 2.781403 AGGGCATAAATTGGATGGCT 57.219 45.000 20.10 8.96 46.29 4.75
324 325 3.901570 AGGGCATAAATTGGATGGCTA 57.098 42.857 20.10 0.00 46.29 3.93
325 326 3.500343 AGGGCATAAATTGGATGGCTAC 58.500 45.455 20.10 9.69 46.29 3.58
326 327 3.117169 AGGGCATAAATTGGATGGCTACA 60.117 43.478 20.10 0.00 46.29 2.74
327 328 3.834231 GGGCATAAATTGGATGGCTACAT 59.166 43.478 20.10 0.00 46.29 2.29
328 329 4.322198 GGGCATAAATTGGATGGCTACATG 60.322 45.833 20.10 0.00 46.29 3.21
329 330 4.240096 GCATAAATTGGATGGCTACATGC 58.760 43.478 0.00 0.00 44.75 4.06
330 331 4.021719 GCATAAATTGGATGGCTACATGCT 60.022 41.667 0.00 0.00 44.78 3.79
331 332 5.466819 CATAAATTGGATGGCTACATGCTG 58.533 41.667 0.00 0.00 44.78 4.41
332 333 1.325355 ATTGGATGGCTACATGCTGC 58.675 50.000 0.00 0.00 44.78 5.25
333 334 1.096967 TTGGATGGCTACATGCTGCG 61.097 55.000 0.00 0.00 44.78 5.18
334 335 1.524621 GGATGGCTACATGCTGCGT 60.525 57.895 0.00 0.00 41.66 5.24
335 336 1.097547 GGATGGCTACATGCTGCGTT 61.098 55.000 0.00 0.00 41.66 4.84
336 337 0.028505 GATGGCTACATGCTGCGTTG 59.971 55.000 0.00 0.00 42.39 4.10
337 338 1.996786 ATGGCTACATGCTGCGTTGC 61.997 55.000 5.78 5.78 42.39 4.17
339 340 1.512734 GCTACATGCTGCGTTGCAC 60.513 57.895 6.62 0.00 46.33 4.57
340 341 1.225827 CTACATGCTGCGTTGCACG 60.226 57.895 6.62 1.81 46.33 5.34
341 342 1.625759 CTACATGCTGCGTTGCACGA 61.626 55.000 11.94 0.00 46.05 4.35
342 343 1.018752 TACATGCTGCGTTGCACGAT 61.019 50.000 11.94 0.00 46.05 3.73
343 344 1.581912 CATGCTGCGTTGCACGATC 60.582 57.895 11.94 0.00 46.05 3.69
344 345 2.034317 ATGCTGCGTTGCACGATCA 61.034 52.632 11.94 6.64 46.05 2.92
345 346 1.576451 ATGCTGCGTTGCACGATCAA 61.576 50.000 11.94 0.00 46.05 2.57
346 347 1.793613 GCTGCGTTGCACGATCAAC 60.794 57.895 11.94 12.26 46.05 3.18
347 348 1.154413 CTGCGTTGCACGATCAACC 60.154 57.895 11.94 10.37 46.05 3.77
348 349 2.175811 GCGTTGCACGATCAACCC 59.824 61.111 11.94 6.31 46.05 4.11
349 350 2.474266 CGTTGCACGATCAACCCG 59.526 61.111 15.10 5.11 46.05 5.28
350 351 2.024868 CGTTGCACGATCAACCCGA 61.025 57.895 15.10 0.00 46.05 5.14
351 352 1.495951 GTTGCACGATCAACCCGAC 59.504 57.895 11.53 0.00 40.18 4.79
352 353 2.024868 TTGCACGATCAACCCGACG 61.025 57.895 0.00 0.00 0.00 5.12
353 354 2.431942 GCACGATCAACCCGACGT 60.432 61.111 0.00 0.00 39.53 4.34
354 355 2.442188 GCACGATCAACCCGACGTC 61.442 63.158 5.18 5.18 36.86 4.34
355 356 1.804326 CACGATCAACCCGACGTCC 60.804 63.158 10.58 0.00 36.86 4.79
356 357 2.270257 ACGATCAACCCGACGTCCA 61.270 57.895 10.58 0.00 33.80 4.02
357 358 1.516386 CGATCAACCCGACGTCCAG 60.516 63.158 10.58 3.78 0.00 3.86
358 359 1.810030 GATCAACCCGACGTCCAGC 60.810 63.158 10.58 0.00 0.00 4.85
366 367 4.451150 GACGTCCAGCGCATCCCA 62.451 66.667 11.47 0.00 46.11 4.37
367 368 3.740128 GACGTCCAGCGCATCCCAT 62.740 63.158 11.47 0.00 46.11 4.00
368 369 2.514592 CGTCCAGCGCATCCCATT 60.515 61.111 11.47 0.00 0.00 3.16
369 370 2.114670 CGTCCAGCGCATCCCATTT 61.115 57.895 11.47 0.00 0.00 2.32
370 371 1.434696 GTCCAGCGCATCCCATTTG 59.565 57.895 11.47 0.00 0.00 2.32
371 372 1.031571 GTCCAGCGCATCCCATTTGA 61.032 55.000 11.47 0.00 0.00 2.69
372 373 0.106569 TCCAGCGCATCCCATTTGAT 60.107 50.000 11.47 0.00 0.00 2.57
373 374 0.748450 CCAGCGCATCCCATTTGATT 59.252 50.000 11.47 0.00 0.00 2.57
374 375 1.269413 CCAGCGCATCCCATTTGATTC 60.269 52.381 11.47 0.00 0.00 2.52
375 376 1.679680 CAGCGCATCCCATTTGATTCT 59.320 47.619 11.47 0.00 0.00 2.40
376 377 2.880268 CAGCGCATCCCATTTGATTCTA 59.120 45.455 11.47 0.00 0.00 2.10
377 378 3.504906 CAGCGCATCCCATTTGATTCTAT 59.495 43.478 11.47 0.00 0.00 1.98
378 379 3.504906 AGCGCATCCCATTTGATTCTATG 59.495 43.478 11.47 0.00 0.00 2.23
379 380 3.829948 CGCATCCCATTTGATTCTATGC 58.170 45.455 0.00 0.00 35.94 3.14
380 381 3.366679 CGCATCCCATTTGATTCTATGCC 60.367 47.826 0.00 0.00 35.89 4.40
381 382 3.575256 GCATCCCATTTGATTCTATGCCA 59.425 43.478 0.00 0.00 33.78 4.92
382 383 4.039488 GCATCCCATTTGATTCTATGCCAA 59.961 41.667 0.00 0.00 33.78 4.52
383 384 5.453621 GCATCCCATTTGATTCTATGCCAAA 60.454 40.000 0.00 0.00 33.78 3.28
384 385 5.857471 TCCCATTTGATTCTATGCCAAAG 57.143 39.130 0.00 0.00 33.91 2.77
385 386 5.517924 TCCCATTTGATTCTATGCCAAAGA 58.482 37.500 0.00 0.00 33.91 2.52
386 387 5.360714 TCCCATTTGATTCTATGCCAAAGAC 59.639 40.000 0.00 0.00 33.91 3.01
387 388 5.127519 CCCATTTGATTCTATGCCAAAGACA 59.872 40.000 0.00 0.00 33.91 3.41
388 389 6.270815 CCATTTGATTCTATGCCAAAGACAG 58.729 40.000 0.00 0.00 33.91 3.51
389 390 6.127535 CCATTTGATTCTATGCCAAAGACAGT 60.128 38.462 0.00 0.00 33.91 3.55
390 391 6.500684 TTTGATTCTATGCCAAAGACAGTC 57.499 37.500 0.00 0.00 0.00 3.51
391 392 5.164620 TGATTCTATGCCAAAGACAGTCA 57.835 39.130 2.66 0.00 0.00 3.41
392 393 5.748402 TGATTCTATGCCAAAGACAGTCAT 58.252 37.500 2.66 0.00 0.00 3.06
393 394 5.819379 TGATTCTATGCCAAAGACAGTCATC 59.181 40.000 2.66 0.00 0.00 2.92
394 395 4.142609 TCTATGCCAAAGACAGTCATCC 57.857 45.455 2.66 0.00 0.00 3.51
395 396 2.134789 ATGCCAAAGACAGTCATCCC 57.865 50.000 2.66 0.00 0.00 3.85
396 397 0.038166 TGCCAAAGACAGTCATCCCC 59.962 55.000 2.66 0.00 0.00 4.81
397 398 0.329596 GCCAAAGACAGTCATCCCCT 59.670 55.000 2.66 0.00 0.00 4.79
398 399 1.680249 GCCAAAGACAGTCATCCCCTC 60.680 57.143 2.66 0.00 0.00 4.30
399 400 1.065126 CCAAAGACAGTCATCCCCTCC 60.065 57.143 2.66 0.00 0.00 4.30
400 401 0.905357 AAAGACAGTCATCCCCTCCG 59.095 55.000 2.66 0.00 0.00 4.63
401 402 0.252284 AAGACAGTCATCCCCTCCGT 60.252 55.000 2.66 0.00 0.00 4.69
402 403 0.252284 AGACAGTCATCCCCTCCGTT 60.252 55.000 2.66 0.00 0.00 4.44
403 404 0.175989 GACAGTCATCCCCTCCGTTC 59.824 60.000 0.00 0.00 0.00 3.95
404 405 0.544357 ACAGTCATCCCCTCCGTTCA 60.544 55.000 0.00 0.00 0.00 3.18
405 406 0.613260 CAGTCATCCCCTCCGTTCAA 59.387 55.000 0.00 0.00 0.00 2.69
406 407 1.003118 CAGTCATCCCCTCCGTTCAAA 59.997 52.381 0.00 0.00 0.00 2.69
407 408 1.702957 AGTCATCCCCTCCGTTCAAAA 59.297 47.619 0.00 0.00 0.00 2.44
408 409 2.308866 AGTCATCCCCTCCGTTCAAAAT 59.691 45.455 0.00 0.00 0.00 1.82
409 410 3.521937 AGTCATCCCCTCCGTTCAAAATA 59.478 43.478 0.00 0.00 0.00 1.40
410 411 4.018779 AGTCATCCCCTCCGTTCAAAATAA 60.019 41.667 0.00 0.00 0.00 1.40
411 412 4.703093 GTCATCCCCTCCGTTCAAAATAAA 59.297 41.667 0.00 0.00 0.00 1.40
412 413 4.947388 TCATCCCCTCCGTTCAAAATAAAG 59.053 41.667 0.00 0.00 0.00 1.85
413 414 4.644163 TCCCCTCCGTTCAAAATAAAGA 57.356 40.909 0.00 0.00 0.00 2.52
414 415 4.988029 TCCCCTCCGTTCAAAATAAAGAA 58.012 39.130 0.00 0.00 0.00 2.52
415 416 5.007682 TCCCCTCCGTTCAAAATAAAGAAG 58.992 41.667 0.00 0.00 0.00 2.85
416 417 5.007682 CCCCTCCGTTCAAAATAAAGAAGA 58.992 41.667 0.00 0.00 0.00 2.87
417 418 5.652452 CCCCTCCGTTCAAAATAAAGAAGAT 59.348 40.000 0.00 0.00 0.00 2.40
418 419 6.152831 CCCCTCCGTTCAAAATAAAGAAGATT 59.847 38.462 0.00 0.00 0.00 2.40
419 420 7.251281 CCCTCCGTTCAAAATAAAGAAGATTC 58.749 38.462 0.00 0.00 0.00 2.52
420 421 7.094377 CCCTCCGTTCAAAATAAAGAAGATTCA 60.094 37.037 0.00 0.00 0.00 2.57
421 422 8.462016 CCTCCGTTCAAAATAAAGAAGATTCAT 58.538 33.333 0.00 0.00 0.00 2.57
422 423 9.846248 CTCCGTTCAAAATAAAGAAGATTCATT 57.154 29.630 0.00 0.00 0.00 2.57
423 424 9.840427 TCCGTTCAAAATAAAGAAGATTCATTC 57.160 29.630 0.00 0.00 0.00 2.67
424 425 9.846248 CCGTTCAAAATAAAGAAGATTCATTCT 57.154 29.630 0.00 0.00 41.31 2.40
435 436 9.525826 AAAGAAGATTCATTCTCTGGTATTGTT 57.474 29.630 0.00 0.00 38.59 2.83
436 437 8.729805 AGAAGATTCATTCTCTGGTATTGTTC 57.270 34.615 0.00 0.00 34.37 3.18
437 438 7.493971 AGAAGATTCATTCTCTGGTATTGTTCG 59.506 37.037 0.00 0.00 34.37 3.95
438 439 6.644347 AGATTCATTCTCTGGTATTGTTCGT 58.356 36.000 0.00 0.00 0.00 3.85
439 440 7.782049 AGATTCATTCTCTGGTATTGTTCGTA 58.218 34.615 0.00 0.00 0.00 3.43
440 441 8.424918 AGATTCATTCTCTGGTATTGTTCGTAT 58.575 33.333 0.00 0.00 0.00 3.06
441 442 7.770801 TTCATTCTCTGGTATTGTTCGTATG 57.229 36.000 0.00 0.00 0.00 2.39
442 443 6.280643 TCATTCTCTGGTATTGTTCGTATGG 58.719 40.000 0.00 0.00 0.00 2.74
443 444 5.670792 TTCTCTGGTATTGTTCGTATGGT 57.329 39.130 0.00 0.00 0.00 3.55
444 445 5.258456 TCTCTGGTATTGTTCGTATGGTC 57.742 43.478 0.00 0.00 0.00 4.02
445 446 4.098960 TCTCTGGTATTGTTCGTATGGTCC 59.901 45.833 0.00 0.00 0.00 4.46
446 447 3.770388 TCTGGTATTGTTCGTATGGTCCA 59.230 43.478 0.00 0.00 0.00 4.02
447 448 3.864243 TGGTATTGTTCGTATGGTCCAC 58.136 45.455 0.00 0.00 0.00 4.02
448 449 2.861935 GGTATTGTTCGTATGGTCCACG 59.138 50.000 0.00 0.00 40.72 4.94
449 450 2.754946 ATTGTTCGTATGGTCCACGT 57.245 45.000 0.00 0.00 40.27 4.49
450 451 1.785768 TTGTTCGTATGGTCCACGTG 58.214 50.000 9.08 9.08 40.27 4.49
451 452 0.960286 TGTTCGTATGGTCCACGTGA 59.040 50.000 19.30 0.00 40.27 4.35
452 453 1.546923 TGTTCGTATGGTCCACGTGAT 59.453 47.619 19.30 4.77 40.27 3.06
453 454 2.754002 TGTTCGTATGGTCCACGTGATA 59.246 45.455 19.30 3.64 40.27 2.15
454 455 3.382227 TGTTCGTATGGTCCACGTGATAT 59.618 43.478 19.30 7.97 40.27 1.63
455 456 3.909776 TCGTATGGTCCACGTGATATC 57.090 47.619 19.30 5.60 40.27 1.63
456 457 3.483421 TCGTATGGTCCACGTGATATCT 58.517 45.455 19.30 0.95 40.27 1.98
457 458 3.887110 TCGTATGGTCCACGTGATATCTT 59.113 43.478 19.30 5.98 40.27 2.40
458 459 5.065235 TCGTATGGTCCACGTGATATCTTA 58.935 41.667 19.30 4.99 40.27 2.10
459 460 5.532032 TCGTATGGTCCACGTGATATCTTAA 59.468 40.000 19.30 0.00 40.27 1.85
460 461 6.208007 TCGTATGGTCCACGTGATATCTTAAT 59.792 38.462 19.30 2.28 40.27 1.40
461 462 6.866770 CGTATGGTCCACGTGATATCTTAATT 59.133 38.462 19.30 0.00 34.74 1.40
462 463 8.024865 CGTATGGTCCACGTGATATCTTAATTA 58.975 37.037 19.30 0.00 34.74 1.40
463 464 9.136952 GTATGGTCCACGTGATATCTTAATTAC 57.863 37.037 19.30 2.20 0.00 1.89
464 465 7.356089 TGGTCCACGTGATATCTTAATTACT 57.644 36.000 19.30 0.00 0.00 2.24
465 466 7.431249 TGGTCCACGTGATATCTTAATTACTC 58.569 38.462 19.30 0.00 0.00 2.59
466 467 7.287005 TGGTCCACGTGATATCTTAATTACTCT 59.713 37.037 19.30 0.00 0.00 3.24
467 468 8.790718 GGTCCACGTGATATCTTAATTACTCTA 58.209 37.037 19.30 0.00 0.00 2.43
518 519 8.927675 AGATCACTATTTTATACTCTCTCCGT 57.072 34.615 0.00 0.00 0.00 4.69
519 520 9.357161 AGATCACTATTTTATACTCTCTCCGTT 57.643 33.333 0.00 0.00 0.00 4.44
520 521 9.615295 GATCACTATTTTATACTCTCTCCGTTC 57.385 37.037 0.00 0.00 0.00 3.95
521 522 7.938715 TCACTATTTTATACTCTCTCCGTTCC 58.061 38.462 0.00 0.00 0.00 3.62
522 523 7.778853 TCACTATTTTATACTCTCTCCGTTCCT 59.221 37.037 0.00 0.00 0.00 3.36
523 524 9.064706 CACTATTTTATACTCTCTCCGTTCCTA 57.935 37.037 0.00 0.00 0.00 2.94
524 525 9.638176 ACTATTTTATACTCTCTCCGTTCCTAA 57.362 33.333 0.00 0.00 0.00 2.69
532 533 7.184067 ACTCTCTCCGTTCCTAAATATTTGT 57.816 36.000 11.05 0.00 0.00 2.83
533 534 7.266400 ACTCTCTCCGTTCCTAAATATTTGTC 58.734 38.462 11.05 0.00 0.00 3.18
534 535 7.124448 ACTCTCTCCGTTCCTAAATATTTGTCT 59.876 37.037 11.05 0.00 0.00 3.41
535 536 7.848128 TCTCTCCGTTCCTAAATATTTGTCTT 58.152 34.615 11.05 0.00 0.00 3.01
536 537 8.319146 TCTCTCCGTTCCTAAATATTTGTCTTT 58.681 33.333 11.05 0.00 0.00 2.52
537 538 8.488651 TCTCCGTTCCTAAATATTTGTCTTTC 57.511 34.615 11.05 0.00 0.00 2.62
538 539 8.319146 TCTCCGTTCCTAAATATTTGTCTTTCT 58.681 33.333 11.05 0.00 0.00 2.52
539 540 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
540 541 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
541 542 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
554 555 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
555 556 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
556 557 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
557 558 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
558 559 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
559 560 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
560 561 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
561 562 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
562 563 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
564 565 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
565 566 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
566 567 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
567 568 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
568 569 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
569 570 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
570 571 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
571 572 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
572 573 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
573 574 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
574 575 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
575 576 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
576 577 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
577 578 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
578 579 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
579 580 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
580 581 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
581 582 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
582 583 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
583 584 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
584 585 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
585 586 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
586 587 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
587 588 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
588 589 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
639 640 9.081204 TGTTTATATACATCCGTATGTGGTAGT 57.919 33.333 3.56 0.00 45.99 2.73
640 641 9.565213 GTTTATATACATCCGTATGTGGTAGTC 57.435 37.037 3.56 0.00 45.99 2.59
641 642 9.524496 TTTATATACATCCGTATGTGGTAGTCT 57.476 33.333 3.56 0.00 45.99 3.24
644 645 9.696572 ATATACATCCGTATGTGGTAGTCTATT 57.303 33.333 3.56 0.00 45.99 1.73
645 646 6.726490 ACATCCGTATGTGGTAGTCTATTT 57.274 37.500 0.00 0.00 44.79 1.40
646 647 6.513180 ACATCCGTATGTGGTAGTCTATTTG 58.487 40.000 0.00 0.00 44.79 2.32
647 648 6.322969 ACATCCGTATGTGGTAGTCTATTTGA 59.677 38.462 0.00 0.00 44.79 2.69
648 649 6.778834 TCCGTATGTGGTAGTCTATTTGAA 57.221 37.500 0.00 0.00 0.00 2.69
649 650 7.172868 TCCGTATGTGGTAGTCTATTTGAAA 57.827 36.000 0.00 0.00 0.00 2.69
650 651 7.788026 TCCGTATGTGGTAGTCTATTTGAAAT 58.212 34.615 0.00 0.00 0.00 2.17
651 652 7.924412 TCCGTATGTGGTAGTCTATTTGAAATC 59.076 37.037 0.00 0.00 0.00 2.17
652 653 7.926555 CCGTATGTGGTAGTCTATTTGAAATCT 59.073 37.037 0.00 0.00 0.00 2.40
653 654 8.969267 CGTATGTGGTAGTCTATTTGAAATCTC 58.031 37.037 0.00 0.00 0.00 2.75
683 684 9.720769 AAAGACAAATATTTAGGAACGAAGAGA 57.279 29.630 0.00 0.00 0.00 3.10
684 685 8.934507 AGACAAATATTTAGGAACGAAGAGAG 57.065 34.615 0.00 0.00 0.00 3.20
720 721 9.849166 ATATGTTTTTATGTTTGTTTACGGAGG 57.151 29.630 0.00 0.00 0.00 4.30
721 722 7.330900 TGTTTTTATGTTTGTTTACGGAGGA 57.669 32.000 0.00 0.00 0.00 3.71
745 746 3.389925 ACTTTGCAATGAACATGTGGG 57.610 42.857 18.35 0.00 0.00 4.61
749 750 3.834489 TGCAATGAACATGTGGGTTTT 57.166 38.095 0.00 0.00 0.00 2.43
791 792 8.836413 GGAAATCGGAAACTATTATGACATCAA 58.164 33.333 0.00 0.00 0.00 2.57
792 793 9.651718 GAAATCGGAAACTATTATGACATCAAC 57.348 33.333 0.00 0.00 0.00 3.18
809 810 1.186267 AACTCCCACACCTCTCCGTC 61.186 60.000 0.00 0.00 0.00 4.79
829 830 1.066587 CCATCTCGCCTCGTCTTCC 59.933 63.158 0.00 0.00 0.00 3.46
833 834 1.751162 CTCGCCTCGTCTTCCTCCT 60.751 63.158 0.00 0.00 0.00 3.69
835 836 0.034767 TCGCCTCGTCTTCCTCCTAA 60.035 55.000 0.00 0.00 0.00 2.69
838 839 2.544069 CGCCTCGTCTTCCTCCTAAATC 60.544 54.545 0.00 0.00 0.00 2.17
879 880 3.706563 GAGCTCCGCATCGACAGCA 62.707 63.158 0.87 0.00 35.86 4.41
882 883 3.971453 CTCCGCATCGACAGCACGT 62.971 63.158 11.65 0.00 34.70 4.49
886 887 0.645355 CGCATCGACAGCACGTAATT 59.355 50.000 11.65 0.00 34.70 1.40
888 889 2.280445 CGCATCGACAGCACGTAATTTA 59.720 45.455 11.65 0.00 34.70 1.40
889 890 3.241836 CGCATCGACAGCACGTAATTTAA 60.242 43.478 11.65 0.00 34.70 1.52
891 892 4.723862 GCATCGACAGCACGTAATTTAAAG 59.276 41.667 6.80 0.00 34.70 1.85
892 893 4.316375 TCGACAGCACGTAATTTAAAGC 57.684 40.909 0.00 0.00 34.70 3.51
893 894 3.741856 TCGACAGCACGTAATTTAAAGCA 59.258 39.130 0.00 0.00 34.70 3.91
894 895 3.838550 CGACAGCACGTAATTTAAAGCAC 59.161 43.478 0.00 0.00 0.00 4.40
895 896 4.155310 ACAGCACGTAATTTAAAGCACC 57.845 40.909 0.00 0.00 0.00 5.01
896 897 3.818773 ACAGCACGTAATTTAAAGCACCT 59.181 39.130 0.00 0.00 0.00 4.00
897 898 4.083484 ACAGCACGTAATTTAAAGCACCTC 60.083 41.667 0.00 0.00 0.00 3.85
898 899 4.154195 CAGCACGTAATTTAAAGCACCTCT 59.846 41.667 0.00 0.00 0.00 3.69
899 900 4.154195 AGCACGTAATTTAAAGCACCTCTG 59.846 41.667 0.00 0.00 0.00 3.35
951 953 0.719465 CGCGCCTAGGTTAGTGTTTG 59.281 55.000 11.31 0.00 0.00 2.93
955 957 2.357075 GCCTAGGTTAGTGTTTGGAGC 58.643 52.381 11.31 0.00 0.00 4.70
1139 1142 2.888051 GCTCGAGCTCCCTTTCGC 60.888 66.667 29.88 0.00 36.79 4.70
1254 1257 2.801631 CCTCGAGATCCACCCTGGC 61.802 68.421 15.71 0.00 37.47 4.85
1272 1275 1.575922 CGTCACCAAGGTCGTCGTA 59.424 57.895 0.00 0.00 0.00 3.43
1380 1383 4.682334 CCCACCATGGCCACAGCA 62.682 66.667 8.16 0.00 42.56 4.41
1419 1422 2.047274 ATCGTCACCGTGCCCAAG 60.047 61.111 0.00 0.00 35.01 3.61
1470 1473 3.224324 GACGGAGCCGCCATCCTA 61.224 66.667 9.14 0.00 44.19 2.94
1479 1482 2.578714 CGCCATCCTAGGAGGCTCC 61.579 68.421 32.10 26.42 46.14 4.70
1534 1537 4.139038 ACTTTATGCCGTAACACCACTTT 58.861 39.130 0.00 0.00 0.00 2.66
1568 1571 7.995998 CCGCATCGTTTTTAATATTTATGTTGC 59.004 33.333 0.00 0.42 0.00 4.17
1620 1631 8.292448 ACAACAGTGCAGTAAGAATAAGAAATG 58.708 33.333 0.00 0.00 0.00 2.32
1655 1666 3.922240 CACTGTTTGCTGTGAATTATGCC 59.078 43.478 0.00 0.00 44.19 4.40
1679 1690 3.445450 AGTGACATCTAATCTGCTCGTGT 59.555 43.478 0.00 0.00 0.00 4.49
1689 1700 7.997482 TCTAATCTGCTCGTGTAATTCTAGTT 58.003 34.615 0.00 0.00 0.00 2.24
1802 1813 5.434408 TCGTGTACTCTTAGCCTGATTAGA 58.566 41.667 0.00 0.00 0.00 2.10
1898 1925 7.550551 TGTTGATGAGGTGTTGAGAATCTATTC 59.449 37.037 0.00 0.00 37.06 1.75
1959 1986 2.320681 TAGTGGTAGGGTCTGTTGCT 57.679 50.000 0.00 0.00 0.00 3.91
1988 2015 5.257082 AGTTTGCGTGTACCTTTGAAATT 57.743 34.783 0.00 0.00 0.00 1.82
1989 2016 5.656480 AGTTTGCGTGTACCTTTGAAATTT 58.344 33.333 0.00 0.00 0.00 1.82
1990 2017 5.518487 AGTTTGCGTGTACCTTTGAAATTTG 59.482 36.000 0.00 0.00 0.00 2.32
1991 2018 3.971150 TGCGTGTACCTTTGAAATTTGG 58.029 40.909 0.00 0.00 0.00 3.28
1992 2019 3.381908 TGCGTGTACCTTTGAAATTTGGT 59.618 39.130 0.00 0.00 36.66 3.67
1993 2020 3.733727 GCGTGTACCTTTGAAATTTGGTG 59.266 43.478 7.92 0.00 34.33 4.17
1994 2021 4.295051 CGTGTACCTTTGAAATTTGGTGG 58.705 43.478 7.92 2.38 34.33 4.61
1995 2022 4.202070 CGTGTACCTTTGAAATTTGGTGGT 60.202 41.667 7.92 7.35 34.33 4.16
1996 2023 5.666462 GTGTACCTTTGAAATTTGGTGGTT 58.334 37.500 7.92 0.00 34.33 3.67
1997 2024 6.110033 GTGTACCTTTGAAATTTGGTGGTTT 58.890 36.000 7.92 0.00 34.33 3.27
1998 2025 6.256975 GTGTACCTTTGAAATTTGGTGGTTTC 59.743 38.462 7.92 0.00 35.45 2.78
1999 2026 4.776349 ACCTTTGAAATTTGGTGGTTTCC 58.224 39.130 0.00 0.00 34.29 3.13
2000 2027 4.226168 ACCTTTGAAATTTGGTGGTTTCCA 59.774 37.500 0.00 0.00 34.29 3.53
2001 2028 5.104151 ACCTTTGAAATTTGGTGGTTTCCAT 60.104 36.000 0.00 0.00 37.33 3.41
2002 2029 5.827267 CCTTTGAAATTTGGTGGTTTCCATT 59.173 36.000 0.00 0.00 37.33 3.16
2003 2030 6.320926 CCTTTGAAATTTGGTGGTTTCCATTT 59.679 34.615 0.00 0.00 37.33 2.32
2004 2031 7.147932 CCTTTGAAATTTGGTGGTTTCCATTTT 60.148 33.333 0.00 0.00 37.33 1.82
2005 2032 8.807948 TTTGAAATTTGGTGGTTTCCATTTTA 57.192 26.923 0.00 0.00 37.33 1.52
2006 2033 7.793927 TGAAATTTGGTGGTTTCCATTTTAC 57.206 32.000 0.00 0.00 37.33 2.01
2007 2034 6.768381 TGAAATTTGGTGGTTTCCATTTTACC 59.232 34.615 0.00 0.00 37.33 2.85
2008 2035 6.508030 AATTTGGTGGTTTCCATTTTACCT 57.492 33.333 0.00 0.00 37.33 3.08
2009 2036 5.959583 TTTGGTGGTTTCCATTTTACCTT 57.040 34.783 0.00 0.00 37.33 3.50
2010 2037 5.959583 TTGGTGGTTTCCATTTTACCTTT 57.040 34.783 0.00 0.00 37.33 3.11
2011 2038 7.433537 TTTGGTGGTTTCCATTTTACCTTTA 57.566 32.000 0.00 0.00 37.33 1.85
2012 2039 7.433537 TTGGTGGTTTCCATTTTACCTTTAA 57.566 32.000 0.00 0.00 37.33 1.52
2013 2040 7.433537 TGGTGGTTTCCATTTTACCTTTAAA 57.566 32.000 0.00 0.00 35.28 1.52
2014 2041 7.858498 TGGTGGTTTCCATTTTACCTTTAAAA 58.142 30.769 0.00 0.00 40.63 1.52
2015 2042 8.495260 TGGTGGTTTCCATTTTACCTTTAAAAT 58.505 29.630 0.00 0.00 45.11 1.82
2042 2069 5.756347 GGTGGTTTCCATTTACCTTTTTGAC 59.244 40.000 0.00 0.00 35.28 3.18
2048 2075 6.633500 TCCATTTACCTTTTTGACAGACAG 57.367 37.500 0.00 0.00 0.00 3.51
2072 2099 9.676195 CAGACTACTGTGATTTAGTATCATCTG 57.324 37.037 0.00 0.00 39.11 2.90
2082 2109 1.693062 AGTATCATCTGGCTGGAGCTG 59.307 52.381 0.00 0.00 41.70 4.24
2128 2155 3.062763 CACTCAAAGACTGGCTACTGTG 58.937 50.000 0.00 0.00 0.00 3.66
2177 2204 3.566351 AGCAATTCTATAACCTTGGGGC 58.434 45.455 0.00 0.00 35.63 5.80
2188 2215 1.463553 CCTTGGGGCACTTGTGGTTC 61.464 60.000 2.81 0.00 0.00 3.62
2196 2223 4.446311 GGGGCACTTGTGGTTCATAGATAT 60.446 45.833 2.81 0.00 0.00 1.63
2249 2276 0.179004 TTGTGTCGCATTCAGGGGTT 60.179 50.000 0.00 0.00 0.00 4.11
2336 2363 5.815222 CCTCAATCCATGTATGTGTCGTTTA 59.185 40.000 0.00 0.00 0.00 2.01
2344 2371 6.033407 CCATGTATGTGTCGTTTACAAAATGC 59.967 38.462 0.00 0.00 40.63 3.56
2348 2375 3.243234 TGTGTCGTTTACAAAATGCCAGG 60.243 43.478 0.00 0.00 40.63 4.45
2399 2426 1.387737 CCTTCAAAGGCCCCATCCA 59.612 57.895 0.00 0.00 39.76 3.41
2400 2427 0.685458 CCTTCAAAGGCCCCATCCAG 60.685 60.000 0.00 0.00 39.76 3.86
2401 2428 0.040204 CTTCAAAGGCCCCATCCAGT 59.960 55.000 0.00 0.00 0.00 4.00
2402 2429 0.486879 TTCAAAGGCCCCATCCAGTT 59.513 50.000 0.00 0.00 0.00 3.16
2403 2430 0.486879 TCAAAGGCCCCATCCAGTTT 59.513 50.000 0.00 0.00 0.00 2.66
2404 2431 0.609662 CAAAGGCCCCATCCAGTTTG 59.390 55.000 0.00 0.00 0.00 2.93
2405 2432 0.190815 AAAGGCCCCATCCAGTTTGT 59.809 50.000 0.00 0.00 0.00 2.83
2406 2433 0.190815 AAGGCCCCATCCAGTTTGTT 59.809 50.000 0.00 0.00 0.00 2.83
2407 2434 0.542702 AGGCCCCATCCAGTTTGTTG 60.543 55.000 0.00 0.00 0.00 3.33
2408 2435 0.831711 GGCCCCATCCAGTTTGTTGT 60.832 55.000 0.00 0.00 0.00 3.32
2409 2436 0.318120 GCCCCATCCAGTTTGTTGTG 59.682 55.000 0.00 0.00 0.00 3.33
2410 2437 0.318120 CCCCATCCAGTTTGTTGTGC 59.682 55.000 0.00 0.00 0.00 4.57
2411 2438 1.039068 CCCATCCAGTTTGTTGTGCA 58.961 50.000 0.00 0.00 0.00 4.57
2412 2439 1.619827 CCCATCCAGTTTGTTGTGCAT 59.380 47.619 0.00 0.00 0.00 3.96
2413 2440 2.824936 CCCATCCAGTTTGTTGTGCATA 59.175 45.455 0.00 0.00 0.00 3.14
2414 2441 3.448301 CCCATCCAGTTTGTTGTGCATAT 59.552 43.478 0.00 0.00 0.00 1.78
2415 2442 4.426416 CCATCCAGTTTGTTGTGCATATG 58.574 43.478 0.00 0.00 0.00 1.78
2416 2443 4.082081 CCATCCAGTTTGTTGTGCATATGT 60.082 41.667 4.29 0.00 0.00 2.29
2417 2444 5.125257 CCATCCAGTTTGTTGTGCATATGTA 59.875 40.000 4.29 0.00 0.00 2.29
2418 2445 6.350027 CCATCCAGTTTGTTGTGCATATGTAA 60.350 38.462 4.29 0.00 0.00 2.41
2419 2446 6.007936 TCCAGTTTGTTGTGCATATGTAAC 57.992 37.500 4.29 8.31 0.00 2.50
2420 2447 5.532779 TCCAGTTTGTTGTGCATATGTAACA 59.467 36.000 14.25 14.25 0.00 2.41
2421 2448 5.858049 CCAGTTTGTTGTGCATATGTAACAG 59.142 40.000 16.27 9.24 34.86 3.16
2422 2449 6.437928 CAGTTTGTTGTGCATATGTAACAGT 58.562 36.000 16.27 7.98 34.86 3.55
2423 2450 7.308288 CCAGTTTGTTGTGCATATGTAACAGTA 60.308 37.037 16.27 10.02 34.86 2.74
2424 2451 7.533900 CAGTTTGTTGTGCATATGTAACAGTAC 59.466 37.037 16.27 16.77 34.86 2.73
2512 2541 9.778741 TGTTCTCAGTTTTATTCTAGTTGATGT 57.221 29.630 0.00 0.00 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.547880 TGGGTTGCTAAAATGACAGAAGTTTA 59.452 34.615 0.00 0.00 0.00 2.01
1 2 5.362430 TGGGTTGCTAAAATGACAGAAGTTT 59.638 36.000 0.00 0.00 0.00 2.66
2 3 4.892934 TGGGTTGCTAAAATGACAGAAGTT 59.107 37.500 0.00 0.00 0.00 2.66
3 4 4.469657 TGGGTTGCTAAAATGACAGAAGT 58.530 39.130 0.00 0.00 0.00 3.01
4 5 5.183713 TGATGGGTTGCTAAAATGACAGAAG 59.816 40.000 0.00 0.00 0.00 2.85
5 6 5.076182 TGATGGGTTGCTAAAATGACAGAA 58.924 37.500 0.00 0.00 0.00 3.02
6 7 4.661222 TGATGGGTTGCTAAAATGACAGA 58.339 39.130 0.00 0.00 0.00 3.41
7 8 5.359009 AGATGATGGGTTGCTAAAATGACAG 59.641 40.000 0.00 0.00 0.00 3.51
8 9 5.263599 AGATGATGGGTTGCTAAAATGACA 58.736 37.500 0.00 0.00 0.00 3.58
9 10 5.841957 AGATGATGGGTTGCTAAAATGAC 57.158 39.130 0.00 0.00 0.00 3.06
10 11 9.639563 TTATTAGATGATGGGTTGCTAAAATGA 57.360 29.630 0.00 0.00 0.00 2.57
11 12 9.683069 GTTATTAGATGATGGGTTGCTAAAATG 57.317 33.333 0.00 0.00 0.00 2.32
12 13 9.646522 AGTTATTAGATGATGGGTTGCTAAAAT 57.353 29.630 0.00 0.00 0.00 1.82
14 15 9.555727 GTAGTTATTAGATGATGGGTTGCTAAA 57.444 33.333 0.00 0.00 0.00 1.85
15 16 8.934697 AGTAGTTATTAGATGATGGGTTGCTAA 58.065 33.333 0.00 0.00 0.00 3.09
16 17 8.492415 AGTAGTTATTAGATGATGGGTTGCTA 57.508 34.615 0.00 0.00 0.00 3.49
17 18 7.291182 AGAGTAGTTATTAGATGATGGGTTGCT 59.709 37.037 0.00 0.00 0.00 3.91
18 19 7.445945 AGAGTAGTTATTAGATGATGGGTTGC 58.554 38.462 0.00 0.00 0.00 4.17
19 20 9.915629 GTAGAGTAGTTATTAGATGATGGGTTG 57.084 37.037 0.00 0.00 0.00 3.77
20 21 9.656323 TGTAGAGTAGTTATTAGATGATGGGTT 57.344 33.333 0.00 0.00 0.00 4.11
21 22 9.656323 TTGTAGAGTAGTTATTAGATGATGGGT 57.344 33.333 0.00 0.00 0.00 4.51
29 30 9.982651 GGAATGCATTGTAGAGTAGTTATTAGA 57.017 33.333 18.59 0.00 0.00 2.10
30 31 9.209175 GGGAATGCATTGTAGAGTAGTTATTAG 57.791 37.037 18.59 0.00 0.00 1.73
31 32 8.934697 AGGGAATGCATTGTAGAGTAGTTATTA 58.065 33.333 18.59 0.00 0.00 0.98
32 33 7.806180 AGGGAATGCATTGTAGAGTAGTTATT 58.194 34.615 18.59 0.00 0.00 1.40
33 34 7.380423 AGGGAATGCATTGTAGAGTAGTTAT 57.620 36.000 18.59 0.00 0.00 1.89
34 35 6.808321 AGGGAATGCATTGTAGAGTAGTTA 57.192 37.500 18.59 0.00 0.00 2.24
35 36 5.700402 AGGGAATGCATTGTAGAGTAGTT 57.300 39.130 18.59 0.00 0.00 2.24
36 37 5.700402 AAGGGAATGCATTGTAGAGTAGT 57.300 39.130 18.59 0.00 0.00 2.73
37 38 6.226787 CCTAAGGGAATGCATTGTAGAGTAG 58.773 44.000 18.59 9.93 33.58 2.57
38 39 5.454755 GCCTAAGGGAATGCATTGTAGAGTA 60.455 44.000 18.59 0.75 33.58 2.59
39 40 4.687219 GCCTAAGGGAATGCATTGTAGAGT 60.687 45.833 18.59 0.00 33.58 3.24
40 41 3.817647 GCCTAAGGGAATGCATTGTAGAG 59.182 47.826 18.59 7.26 33.58 2.43
41 42 3.435026 GGCCTAAGGGAATGCATTGTAGA 60.435 47.826 18.59 0.00 33.58 2.59
42 43 2.887152 GGCCTAAGGGAATGCATTGTAG 59.113 50.000 18.59 11.89 33.58 2.74
43 44 2.424234 GGGCCTAAGGGAATGCATTGTA 60.424 50.000 18.59 2.85 33.58 2.41
44 45 1.689258 GGGCCTAAGGGAATGCATTGT 60.689 52.381 18.59 1.72 33.58 2.71
45 46 1.043022 GGGCCTAAGGGAATGCATTG 58.957 55.000 18.59 1.10 33.58 2.82
46 47 0.636101 TGGGCCTAAGGGAATGCATT 59.364 50.000 12.83 12.83 33.58 3.56
47 48 0.636101 TTGGGCCTAAGGGAATGCAT 59.364 50.000 4.53 0.00 33.58 3.96
48 49 0.636101 ATTGGGCCTAAGGGAATGCA 59.364 50.000 7.87 0.00 33.58 3.96
49 50 2.158460 ACTATTGGGCCTAAGGGAATGC 60.158 50.000 7.87 0.00 33.58 3.56
50 51 3.884037 ACTATTGGGCCTAAGGGAATG 57.116 47.619 7.87 0.00 33.58 2.67
51 52 5.752030 GCATAACTATTGGGCCTAAGGGAAT 60.752 44.000 7.87 0.00 33.58 3.01
52 53 4.447180 GCATAACTATTGGGCCTAAGGGAA 60.447 45.833 7.87 0.00 33.58 3.97
53 54 3.073946 GCATAACTATTGGGCCTAAGGGA 59.926 47.826 7.87 0.00 33.58 4.20
54 55 3.421844 GCATAACTATTGGGCCTAAGGG 58.578 50.000 7.87 5.03 0.00 3.95
55 56 3.074412 CGCATAACTATTGGGCCTAAGG 58.926 50.000 7.87 5.40 0.00 2.69
56 57 3.740115 ACGCATAACTATTGGGCCTAAG 58.260 45.455 7.87 0.00 0.00 2.18
57 58 3.849563 ACGCATAACTATTGGGCCTAA 57.150 42.857 3.11 3.11 0.00 2.69
58 59 3.134985 TCAACGCATAACTATTGGGCCTA 59.865 43.478 4.53 0.00 0.00 3.93
59 60 2.092646 TCAACGCATAACTATTGGGCCT 60.093 45.455 4.53 0.00 0.00 5.19
60 61 2.032924 GTCAACGCATAACTATTGGGCC 59.967 50.000 0.00 0.00 0.00 5.80
61 62 2.680841 TGTCAACGCATAACTATTGGGC 59.319 45.455 0.00 0.00 0.00 5.36
62 63 3.242739 GCTGTCAACGCATAACTATTGGG 60.243 47.826 0.00 0.00 0.00 4.12
63 64 3.544048 CGCTGTCAACGCATAACTATTGG 60.544 47.826 0.00 0.00 0.00 3.16
64 65 3.305897 TCGCTGTCAACGCATAACTATTG 59.694 43.478 0.00 0.00 0.00 1.90
65 66 3.517602 TCGCTGTCAACGCATAACTATT 58.482 40.909 0.00 0.00 0.00 1.73
66 67 3.159353 TCGCTGTCAACGCATAACTAT 57.841 42.857 0.00 0.00 0.00 2.12
67 68 2.640346 TCGCTGTCAACGCATAACTA 57.360 45.000 0.00 0.00 0.00 2.24
68 69 1.660607 CATCGCTGTCAACGCATAACT 59.339 47.619 0.00 0.00 0.00 2.24
69 70 1.267532 CCATCGCTGTCAACGCATAAC 60.268 52.381 0.00 0.00 0.00 1.89
70 71 1.006086 CCATCGCTGTCAACGCATAA 58.994 50.000 0.00 0.00 0.00 1.90
71 72 1.428370 GCCATCGCTGTCAACGCATA 61.428 55.000 0.00 0.00 0.00 3.14
72 73 2.753966 GCCATCGCTGTCAACGCAT 61.754 57.895 0.00 0.00 0.00 4.73
73 74 3.422303 GCCATCGCTGTCAACGCA 61.422 61.111 0.00 0.00 0.00 5.24
74 75 3.372676 CTGCCATCGCTGTCAACGC 62.373 63.158 0.00 0.00 35.36 4.84
75 76 2.780643 CTGCCATCGCTGTCAACG 59.219 61.111 0.00 0.00 35.36 4.10
76 77 2.482374 GCTGCCATCGCTGTCAAC 59.518 61.111 0.00 0.00 36.39 3.18
77 78 3.120385 CGCTGCCATCGCTGTCAA 61.120 61.111 0.00 0.00 36.39 3.18
78 79 3.995219 CTCGCTGCCATCGCTGTCA 62.995 63.158 0.00 0.00 36.39 3.58
79 80 3.260483 CTCGCTGCCATCGCTGTC 61.260 66.667 0.00 0.00 36.39 3.51
90 91 2.882777 CTAGTGTGCCGCTCGCTG 60.883 66.667 16.75 5.28 38.78 5.18
91 92 3.057547 CTCTAGTGTGCCGCTCGCT 62.058 63.158 12.72 12.72 38.78 4.93
92 93 2.580867 CTCTAGTGTGCCGCTCGC 60.581 66.667 0.00 0.00 38.31 5.03
93 94 1.515088 CACTCTAGTGTGCCGCTCG 60.515 63.158 11.70 0.00 40.96 5.03
94 95 4.485554 CACTCTAGTGTGCCGCTC 57.514 61.111 11.70 0.00 40.96 5.03
103 104 5.358442 CACTCTATGGTTGTAGCACTCTAGT 59.642 44.000 0.00 0.00 0.00 2.57
104 105 5.358442 ACACTCTATGGTTGTAGCACTCTAG 59.642 44.000 0.00 0.00 0.00 2.43
105 106 5.262009 ACACTCTATGGTTGTAGCACTCTA 58.738 41.667 0.00 0.00 0.00 2.43
106 107 4.090090 ACACTCTATGGTTGTAGCACTCT 58.910 43.478 0.00 0.00 0.00 3.24
107 108 4.425520 GACACTCTATGGTTGTAGCACTC 58.574 47.826 0.00 0.00 0.00 3.51
108 109 3.119459 CGACACTCTATGGTTGTAGCACT 60.119 47.826 0.00 0.00 0.00 4.40
109 110 3.119602 TCGACACTCTATGGTTGTAGCAC 60.120 47.826 0.00 0.00 0.00 4.40
110 111 3.086282 TCGACACTCTATGGTTGTAGCA 58.914 45.455 0.00 0.00 0.00 3.49
111 112 3.777465 TCGACACTCTATGGTTGTAGC 57.223 47.619 0.00 0.00 0.00 3.58
112 113 5.500645 TCATCGACACTCTATGGTTGTAG 57.499 43.478 0.00 0.00 0.00 2.74
113 114 4.202020 GCTCATCGACACTCTATGGTTGTA 60.202 45.833 0.00 0.00 0.00 2.41
114 115 3.429547 GCTCATCGACACTCTATGGTTGT 60.430 47.826 0.00 0.00 0.00 3.32
115 116 3.119291 GCTCATCGACACTCTATGGTTG 58.881 50.000 0.00 0.00 0.00 3.77
116 117 2.760650 TGCTCATCGACACTCTATGGTT 59.239 45.455 0.00 0.00 0.00 3.67
117 118 2.360483 CTGCTCATCGACACTCTATGGT 59.640 50.000 0.00 0.00 0.00 3.55
118 119 2.288091 CCTGCTCATCGACACTCTATGG 60.288 54.545 0.00 0.00 0.00 2.74
119 120 2.620585 TCCTGCTCATCGACACTCTATG 59.379 50.000 0.00 0.00 0.00 2.23
120 121 2.884012 CTCCTGCTCATCGACACTCTAT 59.116 50.000 0.00 0.00 0.00 1.98
121 122 2.293170 CTCCTGCTCATCGACACTCTA 58.707 52.381 0.00 0.00 0.00 2.43
122 123 1.102154 CTCCTGCTCATCGACACTCT 58.898 55.000 0.00 0.00 0.00 3.24
123 124 0.814457 ACTCCTGCTCATCGACACTC 59.186 55.000 0.00 0.00 0.00 3.51
124 125 1.067283 CAACTCCTGCTCATCGACACT 60.067 52.381 0.00 0.00 0.00 3.55
125 126 1.354040 CAACTCCTGCTCATCGACAC 58.646 55.000 0.00 0.00 0.00 3.67
126 127 3.820595 CAACTCCTGCTCATCGACA 57.179 52.632 0.00 0.00 0.00 4.35
136 137 0.606401 ATGACCGGTTGCAACTCCTG 60.606 55.000 27.64 15.89 0.00 3.86
137 138 0.321653 GATGACCGGTTGCAACTCCT 60.322 55.000 27.64 11.58 0.00 3.69
138 139 1.635663 CGATGACCGGTTGCAACTCC 61.636 60.000 27.64 12.58 33.91 3.85
139 140 0.669318 TCGATGACCGGTTGCAACTC 60.669 55.000 27.64 18.19 39.14 3.01
140 141 0.949105 GTCGATGACCGGTTGCAACT 60.949 55.000 27.64 9.61 39.14 3.16
141 142 1.495951 GTCGATGACCGGTTGCAAC 59.504 57.895 21.59 21.59 39.14 4.17
142 143 2.024868 CGTCGATGACCGGTTGCAA 61.025 57.895 9.42 0.00 39.14 4.08
143 144 2.431771 CGTCGATGACCGGTTGCA 60.432 61.111 9.42 2.68 39.14 4.08
144 145 2.901051 ATCCGTCGATGACCGGTTGC 62.901 60.000 9.42 0.00 39.14 4.17
145 146 0.870307 GATCCGTCGATGACCGGTTG 60.870 60.000 9.42 0.00 39.14 3.77
146 147 1.035932 AGATCCGTCGATGACCGGTT 61.036 55.000 9.42 0.41 39.14 4.44
147 148 1.453379 AGATCCGTCGATGACCGGT 60.453 57.895 6.92 6.92 39.14 5.28
148 149 1.008424 CAGATCCGTCGATGACCGG 60.008 63.158 6.11 5.98 39.14 5.28
149 150 1.658717 GCAGATCCGTCGATGACCG 60.659 63.158 6.11 0.00 40.25 4.79
150 151 0.179111 TTGCAGATCCGTCGATGACC 60.179 55.000 6.11 0.00 0.00 4.02
151 152 0.924090 GTTGCAGATCCGTCGATGAC 59.076 55.000 6.11 0.00 0.00 3.06
152 153 0.179111 GGTTGCAGATCCGTCGATGA 60.179 55.000 6.11 0.00 0.00 2.92
153 154 1.482621 CGGTTGCAGATCCGTCGATG 61.483 60.000 15.53 0.00 41.58 3.84
154 155 1.226974 CGGTTGCAGATCCGTCGAT 60.227 57.895 15.53 0.00 41.58 3.59
155 156 1.868987 TTCGGTTGCAGATCCGTCGA 61.869 55.000 20.46 7.24 45.88 4.20
156 157 1.011968 TTTCGGTTGCAGATCCGTCG 61.012 55.000 20.46 5.40 45.88 5.12
157 158 0.442699 GTTTCGGTTGCAGATCCGTC 59.557 55.000 20.46 12.10 45.88 4.79
158 159 0.953960 GGTTTCGGTTGCAGATCCGT 60.954 55.000 20.46 0.00 45.88 4.69
159 160 0.953471 TGGTTTCGGTTGCAGATCCG 60.953 55.000 17.00 17.00 46.93 4.18
160 161 1.068541 GTTGGTTTCGGTTGCAGATCC 60.069 52.381 0.00 0.00 0.00 3.36
161 162 1.399727 CGTTGGTTTCGGTTGCAGATC 60.400 52.381 0.00 0.00 0.00 2.75
162 163 0.591170 CGTTGGTTTCGGTTGCAGAT 59.409 50.000 0.00 0.00 0.00 2.90
163 164 0.462225 TCGTTGGTTTCGGTTGCAGA 60.462 50.000 0.00 0.00 0.00 4.26
164 165 0.316689 GTCGTTGGTTTCGGTTGCAG 60.317 55.000 0.00 0.00 0.00 4.41
165 166 1.716826 GGTCGTTGGTTTCGGTTGCA 61.717 55.000 0.00 0.00 0.00 4.08
166 167 1.009335 GGTCGTTGGTTTCGGTTGC 60.009 57.895 0.00 0.00 0.00 4.17
167 168 0.733729 TTGGTCGTTGGTTTCGGTTG 59.266 50.000 0.00 0.00 0.00 3.77
168 169 1.018910 CTTGGTCGTTGGTTTCGGTT 58.981 50.000 0.00 0.00 0.00 4.44
169 170 0.816421 CCTTGGTCGTTGGTTTCGGT 60.816 55.000 0.00 0.00 0.00 4.69
170 171 1.512156 CCCTTGGTCGTTGGTTTCGG 61.512 60.000 0.00 0.00 0.00 4.30
171 172 1.512156 CCCCTTGGTCGTTGGTTTCG 61.512 60.000 0.00 0.00 0.00 3.46
172 173 0.179012 TCCCCTTGGTCGTTGGTTTC 60.179 55.000 0.00 0.00 0.00 2.78
173 174 0.179001 CTCCCCTTGGTCGTTGGTTT 60.179 55.000 0.00 0.00 0.00 3.27
174 175 1.454539 CTCCCCTTGGTCGTTGGTT 59.545 57.895 0.00 0.00 0.00 3.67
175 176 2.526046 CCTCCCCTTGGTCGTTGGT 61.526 63.158 0.00 0.00 0.00 3.67
176 177 2.064242 AACCTCCCCTTGGTCGTTGG 62.064 60.000 0.00 0.00 36.69 3.77
177 178 0.605589 GAACCTCCCCTTGGTCGTTG 60.606 60.000 0.00 0.00 36.69 4.10
178 179 0.767060 AGAACCTCCCCTTGGTCGTT 60.767 55.000 0.00 0.00 36.69 3.85
179 180 0.767060 AAGAACCTCCCCTTGGTCGT 60.767 55.000 0.00 0.00 36.69 4.34
180 181 0.036294 GAAGAACCTCCCCTTGGTCG 60.036 60.000 0.00 0.00 36.69 4.79
181 182 0.036294 CGAAGAACCTCCCCTTGGTC 60.036 60.000 0.00 0.00 36.69 4.02
182 183 1.489560 CCGAAGAACCTCCCCTTGGT 61.490 60.000 0.00 0.00 39.91 3.67
183 184 1.299976 CCGAAGAACCTCCCCTTGG 59.700 63.158 0.00 0.00 0.00 3.61
184 185 1.377333 GCCGAAGAACCTCCCCTTG 60.377 63.158 0.00 0.00 0.00 3.61
185 186 1.423794 TTGCCGAAGAACCTCCCCTT 61.424 55.000 0.00 0.00 0.00 3.95
186 187 1.842381 CTTGCCGAAGAACCTCCCCT 61.842 60.000 0.00 0.00 0.00 4.79
187 188 1.377333 CTTGCCGAAGAACCTCCCC 60.377 63.158 0.00 0.00 0.00 4.81
188 189 2.041115 GCTTGCCGAAGAACCTCCC 61.041 63.158 0.00 0.00 0.00 4.30
189 190 0.678048 ATGCTTGCCGAAGAACCTCC 60.678 55.000 0.00 0.00 0.00 4.30
190 191 0.729690 GATGCTTGCCGAAGAACCTC 59.270 55.000 0.00 0.00 0.00 3.85
191 192 1.021390 CGATGCTTGCCGAAGAACCT 61.021 55.000 0.00 0.00 0.00 3.50
192 193 1.425428 CGATGCTTGCCGAAGAACC 59.575 57.895 0.00 0.00 0.00 3.62
193 194 1.226128 GCGATGCTTGCCGAAGAAC 60.226 57.895 0.00 0.00 0.00 3.01
194 195 2.398554 GGCGATGCTTGCCGAAGAA 61.399 57.895 0.00 0.00 43.70 2.52
195 196 2.819595 GGCGATGCTTGCCGAAGA 60.820 61.111 0.00 0.00 43.70 2.87
202 203 3.570638 CTCAGGCGGCGATGCTTG 61.571 66.667 12.98 0.00 42.74 4.01
203 204 2.803155 TTTCTCAGGCGGCGATGCTT 62.803 55.000 12.98 0.00 34.52 3.91
204 205 3.315142 TTTCTCAGGCGGCGATGCT 62.315 57.895 12.98 0.00 34.52 3.79
205 206 2.817423 CTTTCTCAGGCGGCGATGC 61.817 63.158 12.98 0.00 0.00 3.91
206 207 2.817423 GCTTTCTCAGGCGGCGATG 61.817 63.158 12.98 8.88 0.00 3.84
207 208 2.512515 GCTTTCTCAGGCGGCGAT 60.513 61.111 12.98 0.00 0.00 4.58
213 214 4.451652 GCACGCGCTTTCTCAGGC 62.452 66.667 5.73 0.00 34.30 4.85
214 215 3.793144 GGCACGCGCTTTCTCAGG 61.793 66.667 5.73 0.00 38.60 3.86
215 216 3.793144 GGGCACGCGCTTTCTCAG 61.793 66.667 5.73 0.00 38.60 3.35
216 217 4.314440 AGGGCACGCGCTTTCTCA 62.314 61.111 5.73 0.00 38.60 3.27
217 218 3.793144 CAGGGCACGCGCTTTCTC 61.793 66.667 5.73 0.00 37.10 2.87
227 228 3.357079 CTCACAACGGCAGGGCAC 61.357 66.667 0.00 0.00 0.00 5.01
230 231 4.680237 TCGCTCACAACGGCAGGG 62.680 66.667 0.00 0.00 0.00 4.45
231 232 3.114616 CTCGCTCACAACGGCAGG 61.115 66.667 0.00 0.00 0.00 4.85
232 233 3.782244 GCTCGCTCACAACGGCAG 61.782 66.667 0.00 0.00 0.00 4.85
246 247 4.210304 GTCGTTGATGGCGCGCTC 62.210 66.667 32.29 22.06 0.00 5.03
248 249 4.083600 TTGTCGTTGATGGCGCGC 62.084 61.111 25.94 25.94 0.00 6.86
249 250 2.170260 AAGTTGTCGTTGATGGCGCG 62.170 55.000 0.00 0.00 0.00 6.86
250 251 0.040425 AAAGTTGTCGTTGATGGCGC 60.040 50.000 0.00 0.00 0.00 6.53
251 252 2.399396 AAAAGTTGTCGTTGATGGCG 57.601 45.000 0.00 0.00 0.00 5.69
271 272 6.511121 CGTCTTCTTTCTCCGTCATTGAAAAA 60.511 38.462 0.00 0.00 30.67 1.94
272 273 5.050363 CGTCTTCTTTCTCCGTCATTGAAAA 60.050 40.000 0.00 0.00 30.67 2.29
273 274 4.447724 CGTCTTCTTTCTCCGTCATTGAAA 59.552 41.667 0.00 0.00 0.00 2.69
274 275 3.987868 CGTCTTCTTTCTCCGTCATTGAA 59.012 43.478 0.00 0.00 0.00 2.69
275 276 3.254903 TCGTCTTCTTTCTCCGTCATTGA 59.745 43.478 0.00 0.00 0.00 2.57
276 277 3.575630 TCGTCTTCTTTCTCCGTCATTG 58.424 45.455 0.00 0.00 0.00 2.82
277 278 3.936372 TCGTCTTCTTTCTCCGTCATT 57.064 42.857 0.00 0.00 0.00 2.57
278 279 3.444034 TCATCGTCTTCTTTCTCCGTCAT 59.556 43.478 0.00 0.00 0.00 3.06
279 280 2.817844 TCATCGTCTTCTTTCTCCGTCA 59.182 45.455 0.00 0.00 0.00 4.35
280 281 3.489180 TCATCGTCTTCTTTCTCCGTC 57.511 47.619 0.00 0.00 0.00 4.79
281 282 3.936372 TTCATCGTCTTCTTTCTCCGT 57.064 42.857 0.00 0.00 0.00 4.69
282 283 5.460419 CCTATTTCATCGTCTTCTTTCTCCG 59.540 44.000 0.00 0.00 0.00 4.63
283 284 5.755861 CCCTATTTCATCGTCTTCTTTCTCC 59.244 44.000 0.00 0.00 0.00 3.71
284 285 5.235401 GCCCTATTTCATCGTCTTCTTTCTC 59.765 44.000 0.00 0.00 0.00 2.87
285 286 5.119694 GCCCTATTTCATCGTCTTCTTTCT 58.880 41.667 0.00 0.00 0.00 2.52
286 287 4.876107 TGCCCTATTTCATCGTCTTCTTTC 59.124 41.667 0.00 0.00 0.00 2.62
287 288 4.843728 TGCCCTATTTCATCGTCTTCTTT 58.156 39.130 0.00 0.00 0.00 2.52
288 289 4.487714 TGCCCTATTTCATCGTCTTCTT 57.512 40.909 0.00 0.00 0.00 2.52
289 290 4.696479 ATGCCCTATTTCATCGTCTTCT 57.304 40.909 0.00 0.00 0.00 2.85
290 291 6.861065 TTTATGCCCTATTTCATCGTCTTC 57.139 37.500 0.00 0.00 0.00 2.87
291 292 7.255590 CCAATTTATGCCCTATTTCATCGTCTT 60.256 37.037 0.00 0.00 0.00 3.01
292 293 6.207417 CCAATTTATGCCCTATTTCATCGTCT 59.793 38.462 0.00 0.00 0.00 4.18
293 294 6.206634 TCCAATTTATGCCCTATTTCATCGTC 59.793 38.462 0.00 0.00 0.00 4.20
294 295 6.068010 TCCAATTTATGCCCTATTTCATCGT 58.932 36.000 0.00 0.00 0.00 3.73
295 296 6.573664 TCCAATTTATGCCCTATTTCATCG 57.426 37.500 0.00 0.00 0.00 3.84
296 297 7.325694 CCATCCAATTTATGCCCTATTTCATC 58.674 38.462 0.00 0.00 0.00 2.92
297 298 6.296030 GCCATCCAATTTATGCCCTATTTCAT 60.296 38.462 0.00 0.00 0.00 2.57
298 299 5.011943 GCCATCCAATTTATGCCCTATTTCA 59.988 40.000 0.00 0.00 0.00 2.69
299 300 5.246883 AGCCATCCAATTTATGCCCTATTTC 59.753 40.000 0.00 0.00 0.00 2.17
300 301 5.157395 AGCCATCCAATTTATGCCCTATTT 58.843 37.500 0.00 0.00 0.00 1.40
301 302 4.755437 AGCCATCCAATTTATGCCCTATT 58.245 39.130 0.00 0.00 0.00 1.73
302 303 4.408904 AGCCATCCAATTTATGCCCTAT 57.591 40.909 0.00 0.00 0.00 2.57
303 304 3.901570 AGCCATCCAATTTATGCCCTA 57.098 42.857 0.00 0.00 0.00 3.53
304 305 2.781403 AGCCATCCAATTTATGCCCT 57.219 45.000 0.00 0.00 0.00 5.19
305 306 3.230134 TGTAGCCATCCAATTTATGCCC 58.770 45.455 0.00 0.00 0.00 5.36
306 307 4.813027 CATGTAGCCATCCAATTTATGCC 58.187 43.478 0.00 0.00 0.00 4.40
307 308 4.240096 GCATGTAGCCATCCAATTTATGC 58.760 43.478 0.00 0.00 37.23 3.14
321 322 2.869646 TGCAACGCAGCATGTAGC 59.130 55.556 0.00 0.00 40.11 3.58
333 334 1.495951 GTCGGGTTGATCGTGCAAC 59.504 57.895 12.52 12.52 45.62 4.17
334 335 2.024868 CGTCGGGTTGATCGTGCAA 61.025 57.895 0.00 0.00 0.00 4.08
335 336 2.431771 CGTCGGGTTGATCGTGCA 60.432 61.111 0.00 0.00 0.00 4.57
336 337 2.431942 ACGTCGGGTTGATCGTGC 60.432 61.111 0.00 0.00 34.56 5.34
337 338 1.804326 GGACGTCGGGTTGATCGTG 60.804 63.158 9.92 0.00 35.49 4.35
338 339 2.209064 CTGGACGTCGGGTTGATCGT 62.209 60.000 9.92 0.00 37.15 3.73
339 340 1.516386 CTGGACGTCGGGTTGATCG 60.516 63.158 9.92 0.00 0.00 3.69
340 341 1.810030 GCTGGACGTCGGGTTGATC 60.810 63.158 9.92 0.00 0.00 2.92
341 342 2.264794 GCTGGACGTCGGGTTGAT 59.735 61.111 9.92 0.00 0.00 2.57
342 343 4.351938 CGCTGGACGTCGGGTTGA 62.352 66.667 9.92 0.00 36.87 3.18
349 350 3.740128 ATGGGATGCGCTGGACGTC 62.740 63.158 9.73 7.13 46.11 4.34
350 351 2.819984 AAATGGGATGCGCTGGACGT 62.820 55.000 9.73 0.00 46.11 4.34
352 353 1.031571 TCAAATGGGATGCGCTGGAC 61.032 55.000 9.73 0.00 0.00 4.02
353 354 0.106569 ATCAAATGGGATGCGCTGGA 60.107 50.000 9.73 0.00 0.00 3.86
354 355 0.748450 AATCAAATGGGATGCGCTGG 59.252 50.000 9.73 0.00 0.00 4.85
355 356 1.679680 AGAATCAAATGGGATGCGCTG 59.320 47.619 9.73 0.00 0.00 5.18
356 357 2.062971 AGAATCAAATGGGATGCGCT 57.937 45.000 9.73 0.00 0.00 5.92
357 358 3.829948 CATAGAATCAAATGGGATGCGC 58.170 45.455 0.00 0.00 0.00 6.09
358 359 3.366679 GGCATAGAATCAAATGGGATGCG 60.367 47.826 0.00 0.00 39.23 4.73
359 360 3.575256 TGGCATAGAATCAAATGGGATGC 59.425 43.478 0.00 0.00 37.95 3.91
360 361 5.794726 TTGGCATAGAATCAAATGGGATG 57.205 39.130 0.00 0.00 0.00 3.51
361 362 6.041296 GTCTTTGGCATAGAATCAAATGGGAT 59.959 38.462 9.28 0.00 31.21 3.85
362 363 5.360714 GTCTTTGGCATAGAATCAAATGGGA 59.639 40.000 9.28 0.00 31.21 4.37
363 364 5.127519 TGTCTTTGGCATAGAATCAAATGGG 59.872 40.000 9.28 0.00 31.21 4.00
364 365 6.127535 ACTGTCTTTGGCATAGAATCAAATGG 60.128 38.462 9.28 0.00 31.21 3.16
365 366 6.860080 ACTGTCTTTGGCATAGAATCAAATG 58.140 36.000 9.28 0.00 31.21 2.32
366 367 6.660521 TGACTGTCTTTGGCATAGAATCAAAT 59.339 34.615 9.28 0.00 31.21 2.32
367 368 6.003326 TGACTGTCTTTGGCATAGAATCAAA 58.997 36.000 9.28 0.00 0.00 2.69
368 369 5.559770 TGACTGTCTTTGGCATAGAATCAA 58.440 37.500 9.28 0.00 0.00 2.57
369 370 5.164620 TGACTGTCTTTGGCATAGAATCA 57.835 39.130 9.28 10.50 0.00 2.57
370 371 5.238214 GGATGACTGTCTTTGGCATAGAATC 59.762 44.000 9.28 8.27 0.00 2.52
371 372 5.128919 GGATGACTGTCTTTGGCATAGAAT 58.871 41.667 9.28 0.00 0.00 2.40
372 373 4.517285 GGATGACTGTCTTTGGCATAGAA 58.483 43.478 9.28 0.00 0.00 2.10
373 374 3.118261 GGGATGACTGTCTTTGGCATAGA 60.118 47.826 9.51 3.36 0.00 1.98
374 375 3.209410 GGGATGACTGTCTTTGGCATAG 58.791 50.000 9.51 0.00 0.00 2.23
375 376 2.092429 GGGGATGACTGTCTTTGGCATA 60.092 50.000 9.51 0.00 0.00 3.14
376 377 1.341383 GGGGATGACTGTCTTTGGCAT 60.341 52.381 9.51 0.00 0.00 4.40
377 378 0.038166 GGGGATGACTGTCTTTGGCA 59.962 55.000 9.51 0.00 0.00 4.92
378 379 0.329596 AGGGGATGACTGTCTTTGGC 59.670 55.000 9.51 0.00 0.00 4.52
379 380 1.065126 GGAGGGGATGACTGTCTTTGG 60.065 57.143 9.51 0.00 0.00 3.28
380 381 1.406069 CGGAGGGGATGACTGTCTTTG 60.406 57.143 9.51 0.00 0.00 2.77
381 382 0.905357 CGGAGGGGATGACTGTCTTT 59.095 55.000 9.51 0.00 0.00 2.52
382 383 0.252284 ACGGAGGGGATGACTGTCTT 60.252 55.000 9.51 2.27 0.00 3.01
383 384 0.252284 AACGGAGGGGATGACTGTCT 60.252 55.000 9.51 0.00 0.00 3.41
384 385 0.175989 GAACGGAGGGGATGACTGTC 59.824 60.000 0.00 0.00 0.00 3.51
385 386 0.544357 TGAACGGAGGGGATGACTGT 60.544 55.000 0.00 0.00 0.00 3.55
386 387 0.613260 TTGAACGGAGGGGATGACTG 59.387 55.000 0.00 0.00 0.00 3.51
387 388 1.358152 TTTGAACGGAGGGGATGACT 58.642 50.000 0.00 0.00 0.00 3.41
388 389 2.194201 TTTTGAACGGAGGGGATGAC 57.806 50.000 0.00 0.00 0.00 3.06
389 390 4.577988 TTATTTTGAACGGAGGGGATGA 57.422 40.909 0.00 0.00 0.00 2.92
390 391 4.947388 TCTTTATTTTGAACGGAGGGGATG 59.053 41.667 0.00 0.00 0.00 3.51
391 392 5.187621 TCTTTATTTTGAACGGAGGGGAT 57.812 39.130 0.00 0.00 0.00 3.85
392 393 4.644163 TCTTTATTTTGAACGGAGGGGA 57.356 40.909 0.00 0.00 0.00 4.81
393 394 5.007682 TCTTCTTTATTTTGAACGGAGGGG 58.992 41.667 0.00 0.00 0.00 4.79
394 395 6.759497 ATCTTCTTTATTTTGAACGGAGGG 57.241 37.500 0.00 0.00 0.00 4.30
395 396 7.816640 TGAATCTTCTTTATTTTGAACGGAGG 58.183 34.615 0.00 0.00 0.00 4.30
396 397 9.846248 AATGAATCTTCTTTATTTTGAACGGAG 57.154 29.630 0.00 0.00 0.00 4.63
397 398 9.840427 GAATGAATCTTCTTTATTTTGAACGGA 57.160 29.630 0.00 0.00 0.00 4.69
398 399 9.846248 AGAATGAATCTTCTTTATTTTGAACGG 57.154 29.630 0.00 0.00 33.39 4.44
409 410 9.525826 AACAATACCAGAGAATGAATCTTCTTT 57.474 29.630 0.00 0.00 38.96 2.52
410 411 9.171877 GAACAATACCAGAGAATGAATCTTCTT 57.828 33.333 0.00 0.00 38.96 2.52
411 412 7.493971 CGAACAATACCAGAGAATGAATCTTCT 59.506 37.037 0.00 0.00 38.96 2.85
412 413 7.278868 ACGAACAATACCAGAGAATGAATCTTC 59.721 37.037 0.00 0.00 38.96 2.87
413 414 7.106239 ACGAACAATACCAGAGAATGAATCTT 58.894 34.615 0.00 0.00 38.96 2.40
414 415 6.644347 ACGAACAATACCAGAGAATGAATCT 58.356 36.000 0.00 0.00 42.61 2.40
415 416 6.910536 ACGAACAATACCAGAGAATGAATC 57.089 37.500 0.00 0.00 0.00 2.52
416 417 7.442364 CCATACGAACAATACCAGAGAATGAAT 59.558 37.037 0.00 0.00 0.00 2.57
417 418 6.761242 CCATACGAACAATACCAGAGAATGAA 59.239 38.462 0.00 0.00 0.00 2.57
418 419 6.127168 ACCATACGAACAATACCAGAGAATGA 60.127 38.462 0.00 0.00 0.00 2.57
419 420 6.049149 ACCATACGAACAATACCAGAGAATG 58.951 40.000 0.00 0.00 0.00 2.67
420 421 6.235231 ACCATACGAACAATACCAGAGAAT 57.765 37.500 0.00 0.00 0.00 2.40
421 422 5.394883 GGACCATACGAACAATACCAGAGAA 60.395 44.000 0.00 0.00 0.00 2.87
422 423 4.098960 GGACCATACGAACAATACCAGAGA 59.901 45.833 0.00 0.00 0.00 3.10
423 424 4.142026 TGGACCATACGAACAATACCAGAG 60.142 45.833 0.00 0.00 0.00 3.35
424 425 3.770388 TGGACCATACGAACAATACCAGA 59.230 43.478 0.00 0.00 0.00 3.86
425 426 3.869246 GTGGACCATACGAACAATACCAG 59.131 47.826 0.00 0.00 0.00 4.00
426 427 3.676598 CGTGGACCATACGAACAATACCA 60.677 47.826 0.00 0.00 43.82 3.25
427 428 2.861935 CGTGGACCATACGAACAATACC 59.138 50.000 0.00 0.00 43.82 2.73
428 429 3.305094 CACGTGGACCATACGAACAATAC 59.695 47.826 7.95 0.00 43.82 1.89
429 430 3.193056 TCACGTGGACCATACGAACAATA 59.807 43.478 17.00 0.00 43.82 1.90
430 431 2.028839 TCACGTGGACCATACGAACAAT 60.029 45.455 17.00 0.00 43.82 2.71
431 432 1.340568 TCACGTGGACCATACGAACAA 59.659 47.619 17.00 0.00 43.82 2.83
432 433 0.960286 TCACGTGGACCATACGAACA 59.040 50.000 17.00 0.00 43.82 3.18
433 434 2.288961 ATCACGTGGACCATACGAAC 57.711 50.000 17.00 0.00 43.82 3.95
434 435 3.887110 AGATATCACGTGGACCATACGAA 59.113 43.478 17.00 0.00 43.82 3.85
435 436 3.483421 AGATATCACGTGGACCATACGA 58.517 45.455 17.00 2.19 43.82 3.43
436 437 3.917329 AGATATCACGTGGACCATACG 57.083 47.619 17.00 0.00 46.31 3.06
437 438 9.136952 GTAATTAAGATATCACGTGGACCATAC 57.863 37.037 17.00 3.36 0.00 2.39
438 439 9.085645 AGTAATTAAGATATCACGTGGACCATA 57.914 33.333 17.00 6.42 0.00 2.74
439 440 7.963532 AGTAATTAAGATATCACGTGGACCAT 58.036 34.615 17.00 4.06 0.00 3.55
440 441 7.287005 AGAGTAATTAAGATATCACGTGGACCA 59.713 37.037 17.00 0.00 0.00 4.02
441 442 7.659186 AGAGTAATTAAGATATCACGTGGACC 58.341 38.462 17.00 2.95 0.00 4.46
493 494 8.927675 ACGGAGAGAGTATAAAATAGTGATCT 57.072 34.615 0.00 0.00 0.00 2.75
494 495 9.615295 GAACGGAGAGAGTATAAAATAGTGATC 57.385 37.037 0.00 0.00 0.00 2.92
495 496 8.578151 GGAACGGAGAGAGTATAAAATAGTGAT 58.422 37.037 0.00 0.00 0.00 3.06
496 497 7.778853 AGGAACGGAGAGAGTATAAAATAGTGA 59.221 37.037 0.00 0.00 0.00 3.41
497 498 7.942990 AGGAACGGAGAGAGTATAAAATAGTG 58.057 38.462 0.00 0.00 0.00 2.74
498 499 9.638176 TTAGGAACGGAGAGAGTATAAAATAGT 57.362 33.333 0.00 0.00 0.00 2.12
506 507 8.925338 ACAAATATTTAGGAACGGAGAGAGTAT 58.075 33.333 0.00 0.00 0.00 2.12
507 508 8.302515 ACAAATATTTAGGAACGGAGAGAGTA 57.697 34.615 0.00 0.00 0.00 2.59
508 509 7.124448 AGACAAATATTTAGGAACGGAGAGAGT 59.876 37.037 0.00 0.00 0.00 3.24
509 510 7.493367 AGACAAATATTTAGGAACGGAGAGAG 58.507 38.462 0.00 0.00 0.00 3.20
510 511 7.419711 AGACAAATATTTAGGAACGGAGAGA 57.580 36.000 0.00 0.00 0.00 3.10
511 512 8.494016 AAAGACAAATATTTAGGAACGGAGAG 57.506 34.615 0.00 0.00 0.00 3.20
512 513 8.319146 AGAAAGACAAATATTTAGGAACGGAGA 58.681 33.333 0.00 0.00 0.00 3.71
513 514 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
514 515 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
515 516 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
528 529 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
529 530 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
530 531 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
531 532 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
532 533 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
533 534 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
534 535 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
535 536 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
536 537 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
537 538 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
538 539 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
539 540 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
540 541 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
541 542 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
542 543 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
543 544 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
544 545 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
545 546 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
546 547 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
547 548 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
548 549 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
549 550 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
550 551 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
551 552 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
552 553 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
553 554 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
554 555 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
555 556 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
556 557 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
557 558 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
558 559 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
559 560 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
560 561 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
561 562 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
562 563 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
563 564 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
564 565 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
565 566 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
566 567 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
567 568 9.890629 TTATAGTGTAGATTCACTCATTTTGCT 57.109 29.630 2.59 0.00 45.79 3.91
613 614 9.081204 ACTACCACATACGGATGTATATAAACA 57.919 33.333 14.23 0.00 44.82 2.83
614 615 9.565213 GACTACCACATACGGATGTATATAAAC 57.435 37.037 14.23 0.00 44.82 2.01
615 616 9.524496 AGACTACCACATACGGATGTATATAAA 57.476 33.333 14.23 0.00 44.82 1.40
618 619 9.696572 AATAGACTACCACATACGGATGTATAT 57.303 33.333 14.23 4.37 44.82 0.86
619 620 9.524496 AAATAGACTACCACATACGGATGTATA 57.476 33.333 14.23 8.27 44.82 1.47
620 621 8.304596 CAAATAGACTACCACATACGGATGTAT 58.695 37.037 14.23 7.46 44.82 2.29
621 622 7.503230 TCAAATAGACTACCACATACGGATGTA 59.497 37.037 14.23 0.00 44.82 2.29
623 624 6.745116 TCAAATAGACTACCACATACGGATG 58.255 40.000 5.94 5.94 39.16 3.51
624 625 6.971726 TCAAATAGACTACCACATACGGAT 57.028 37.500 0.00 0.00 0.00 4.18
625 626 6.778834 TTCAAATAGACTACCACATACGGA 57.221 37.500 0.00 0.00 0.00 4.69
626 627 7.926555 AGATTTCAAATAGACTACCACATACGG 59.073 37.037 0.00 0.00 0.00 4.02
627 628 8.873215 AGATTTCAAATAGACTACCACATACG 57.127 34.615 0.00 0.00 0.00 3.06
657 658 9.720769 TCTCTTCGTTCCTAAATATTTGTCTTT 57.279 29.630 11.05 0.00 0.00 2.52
658 659 9.372369 CTCTCTTCGTTCCTAAATATTTGTCTT 57.628 33.333 11.05 0.00 0.00 3.01
659 660 8.532819 ACTCTCTTCGTTCCTAAATATTTGTCT 58.467 33.333 11.05 0.00 0.00 3.41
660 661 8.705048 ACTCTCTTCGTTCCTAAATATTTGTC 57.295 34.615 11.05 0.00 0.00 3.18
661 662 9.804758 CTACTCTCTTCGTTCCTAAATATTTGT 57.195 33.333 11.05 0.00 0.00 2.83
662 663 9.804758 ACTACTCTCTTCGTTCCTAAATATTTG 57.195 33.333 11.05 1.40 0.00 2.32
695 696 9.064706 TCCTCCGTAAACAAACATAAAAACATA 57.935 29.630 0.00 0.00 0.00 2.29
699 700 7.998580 ACTTCCTCCGTAAACAAACATAAAAA 58.001 30.769 0.00 0.00 0.00 1.94
701 702 7.933033 AGTACTTCCTCCGTAAACAAACATAAA 59.067 33.333 0.00 0.00 0.00 1.40
706 707 6.424683 CAAAGTACTTCCTCCGTAAACAAAC 58.575 40.000 8.95 0.00 0.00 2.93
720 721 5.630680 CCACATGTTCATTGCAAAGTACTTC 59.369 40.000 8.95 0.00 0.00 3.01
721 722 5.509501 CCCACATGTTCATTGCAAAGTACTT 60.510 40.000 1.71 1.12 0.00 2.24
760 761 9.717892 GTCATAATAGTTTCCGATTTCCTTTTC 57.282 33.333 0.00 0.00 0.00 2.29
791 792 1.606889 GACGGAGAGGTGTGGGAGT 60.607 63.158 0.00 0.00 0.00 3.85
792 793 1.304547 AGACGGAGAGGTGTGGGAG 60.305 63.158 0.00 0.00 0.00 4.30
809 810 0.030101 GAAGACGAGGCGAGATGGAG 59.970 60.000 0.00 0.00 0.00 3.86
829 830 1.063942 GTGGGTTGGGGGATTTAGGAG 60.064 57.143 0.00 0.00 0.00 3.69
833 834 1.000646 GCGTGGGTTGGGGGATTTA 60.001 57.895 0.00 0.00 0.00 1.40
835 836 3.585428 TGCGTGGGTTGGGGGATT 61.585 61.111 0.00 0.00 0.00 3.01
879 880 3.439129 GCCAGAGGTGCTTTAAATTACGT 59.561 43.478 0.00 0.00 0.00 3.57
882 883 4.018415 AGAGGCCAGAGGTGCTTTAAATTA 60.018 41.667 5.01 0.00 0.00 1.40
886 887 1.362224 AGAGGCCAGAGGTGCTTTAA 58.638 50.000 5.01 0.00 0.00 1.52
888 889 0.037447 GAAGAGGCCAGAGGTGCTTT 59.963 55.000 5.01 0.00 0.00 3.51
889 890 1.682257 GAAGAGGCCAGAGGTGCTT 59.318 57.895 5.01 0.00 0.00 3.91
891 892 2.270527 GGAAGAGGCCAGAGGTGC 59.729 66.667 5.01 0.00 0.00 5.01
892 893 1.908340 CTGGGAAGAGGCCAGAGGTG 61.908 65.000 5.01 0.00 33.87 4.00
893 894 1.614824 CTGGGAAGAGGCCAGAGGT 60.615 63.158 5.01 0.00 33.87 3.85
894 895 3.041469 GCTGGGAAGAGGCCAGAGG 62.041 68.421 5.01 0.00 33.87 3.69
895 896 2.588989 GCTGGGAAGAGGCCAGAG 59.411 66.667 5.01 0.00 33.87 3.35
896 897 3.393970 CGCTGGGAAGAGGCCAGA 61.394 66.667 5.01 0.00 33.87 3.86
944 946 2.539081 GGAGGGGGCTCCAAACACT 61.539 63.158 5.99 0.00 42.86 3.55
1254 1257 0.727122 GTACGACGACCTTGGTGACG 60.727 60.000 0.00 5.05 0.00 4.35
1266 1269 2.482374 GACAGGTCCCGTACGACG 59.518 66.667 18.76 6.40 42.11 5.12
1309 1312 2.762234 CGAGCTCGAAGGTAGCGGT 61.762 63.158 32.06 0.00 44.87 5.68
1454 1457 3.227276 CTAGGATGGCGGCTCCGT 61.227 66.667 11.43 6.09 42.09 4.69
1620 1631 6.484643 ACAGCAAACAGTGATCCATATACATC 59.515 38.462 0.00 0.00 0.00 3.06
1655 1666 5.211454 CACGAGCAGATTAGATGTCACTAG 58.789 45.833 0.00 0.00 0.00 2.57
1679 1690 6.316890 GCCCCACAACGAAATAACTAGAATTA 59.683 38.462 0.00 0.00 0.00 1.40
1689 1700 3.727738 TGTGCCCCACAACGAAATA 57.272 47.368 0.00 0.00 41.69 1.40
1820 1831 5.338219 GCTGGCTCAGATATAACCATCTCAT 60.338 44.000 6.40 0.00 32.83 2.90
1907 1934 4.274794 TGGCATACCTAGAGAACCCTAA 57.725 45.455 0.00 0.00 36.63 2.69
1959 1986 3.997762 AGGTACACGCAAACTACAATCA 58.002 40.909 0.00 0.00 0.00 2.57
1988 2015 5.959583 AAAGGTAAAATGGAAACCACCAA 57.040 34.783 0.00 0.00 43.47 3.67
1989 2016 7.433537 TTTAAAGGTAAAATGGAAACCACCA 57.566 32.000 0.00 0.00 44.41 4.17
1990 2017 8.911918 ATTTTAAAGGTAAAATGGAAACCACC 57.088 30.769 4.14 0.00 44.57 4.61
1996 2023 9.343539 CCACCAAATTTTAAAGGTAAAATGGAA 57.656 29.630 14.25 0.00 45.20 3.53
1997 2024 8.495260 ACCACCAAATTTTAAAGGTAAAATGGA 58.505 29.630 14.25 0.00 45.20 3.41
1998 2025 8.684386 ACCACCAAATTTTAAAGGTAAAATGG 57.316 30.769 5.46 7.35 45.20 3.16
2001 2028 9.175312 GGAAACCACCAAATTTTAAAGGTAAAA 57.825 29.630 0.00 0.00 42.06 1.52
2002 2029 8.326529 TGGAAACCACCAAATTTTAAAGGTAAA 58.673 29.630 0.00 0.00 36.96 2.01
2003 2030 7.858498 TGGAAACCACCAAATTTTAAAGGTAA 58.142 30.769 0.00 0.00 36.96 2.85
2004 2031 7.433537 TGGAAACCACCAAATTTTAAAGGTA 57.566 32.000 0.00 0.00 36.96 3.08
2005 2032 6.314899 TGGAAACCACCAAATTTTAAAGGT 57.685 33.333 0.00 0.00 36.96 3.50
2006 2033 7.815840 AATGGAAACCACCAAATTTTAAAGG 57.184 32.000 0.00 0.00 43.47 3.11
2008 2035 9.121658 GGTAAATGGAAACCACCAAATTTTAAA 57.878 29.630 0.00 0.00 43.47 1.52
2009 2036 8.495260 AGGTAAATGGAAACCACCAAATTTTAA 58.505 29.630 0.00 0.00 43.47 1.52
2010 2037 8.035448 AGGTAAATGGAAACCACCAAATTTTA 57.965 30.769 0.00 0.00 43.47 1.52
2011 2038 6.905736 AGGTAAATGGAAACCACCAAATTTT 58.094 32.000 0.00 0.00 43.47 1.82
2012 2039 6.508030 AGGTAAATGGAAACCACCAAATTT 57.492 33.333 0.00 0.00 43.47 1.82
2013 2040 6.508030 AAGGTAAATGGAAACCACCAAATT 57.492 33.333 0.00 0.00 43.47 1.82
2014 2041 6.508030 AAAGGTAAATGGAAACCACCAAAT 57.492 33.333 0.00 0.00 43.47 2.32
2015 2042 5.959583 AAAGGTAAATGGAAACCACCAAA 57.040 34.783 0.00 0.00 43.47 3.28
2018 2045 5.756347 GTCAAAAAGGTAAATGGAAACCACC 59.244 40.000 0.00 0.00 38.30 4.61
2048 2075 7.596995 GCCAGATGATACTAAATCACAGTAGTC 59.403 40.741 0.00 0.00 32.24 2.59
2082 2109 6.035327 GCCACAAGATTTCATAATTGCTCAAC 59.965 38.462 0.00 0.00 0.00 3.18
2128 2155 5.708948 AGCTTTGCTAGATGATACTCGATC 58.291 41.667 0.00 0.00 36.99 3.69
2196 2223 9.409312 CACTGATTTAACACAGCATAATCAAAA 57.591 29.630 7.67 0.00 35.50 2.44
2336 2363 1.688197 CTCACCAACCTGGCATTTTGT 59.312 47.619 0.00 0.00 42.67 2.83
2344 2371 0.909610 TAGGCCTCTCACCAACCTGG 60.910 60.000 9.68 0.00 45.02 4.45
2348 2375 3.118261 TGATTGATAGGCCTCTCACCAAC 60.118 47.826 19.79 11.71 0.00 3.77
2399 2426 6.633500 ACTGTTACATATGCACAACAAACT 57.367 33.333 15.12 3.53 31.00 2.66
2400 2427 6.518395 CGTACTGTTACATATGCACAACAAAC 59.482 38.462 15.12 14.35 31.00 2.93
2401 2428 6.424207 TCGTACTGTTACATATGCACAACAAA 59.576 34.615 15.12 7.38 31.00 2.83
2402 2429 5.927115 TCGTACTGTTACATATGCACAACAA 59.073 36.000 15.12 3.88 31.00 2.83
2403 2430 5.471257 TCGTACTGTTACATATGCACAACA 58.529 37.500 14.09 14.09 0.00 3.33
2404 2431 6.090358 AGTTCGTACTGTTACATATGCACAAC 59.910 38.462 1.58 5.64 31.99 3.32
2405 2432 6.160684 AGTTCGTACTGTTACATATGCACAA 58.839 36.000 1.58 0.00 31.99 3.33
2406 2433 5.716094 AGTTCGTACTGTTACATATGCACA 58.284 37.500 1.58 5.42 31.99 4.57
2407 2434 6.466812 CAAGTTCGTACTGTTACATATGCAC 58.533 40.000 1.58 0.42 34.01 4.57
2408 2435 5.062934 GCAAGTTCGTACTGTTACATATGCA 59.937 40.000 1.58 0.00 34.01 3.96
2409 2436 5.291128 AGCAAGTTCGTACTGTTACATATGC 59.709 40.000 1.58 0.00 34.01 3.14
2410 2437 6.887376 AGCAAGTTCGTACTGTTACATATG 57.113 37.500 0.00 0.00 34.01 1.78
2411 2438 6.872020 ACAAGCAAGTTCGTACTGTTACATAT 59.128 34.615 0.00 0.00 34.01 1.78
2412 2439 6.218019 ACAAGCAAGTTCGTACTGTTACATA 58.782 36.000 0.00 0.00 34.01 2.29
2413 2440 5.054477 ACAAGCAAGTTCGTACTGTTACAT 58.946 37.500 0.00 0.00 34.01 2.29
2414 2441 4.435425 ACAAGCAAGTTCGTACTGTTACA 58.565 39.130 0.00 0.00 34.01 2.41
2415 2442 5.399604 AACAAGCAAGTTCGTACTGTTAC 57.600 39.130 0.00 0.00 34.01 2.50
2416 2443 6.425577 AAAACAAGCAAGTTCGTACTGTTA 57.574 33.333 0.00 0.00 34.01 2.41
2417 2444 4.957759 AAACAAGCAAGTTCGTACTGTT 57.042 36.364 0.00 0.00 34.01 3.16
2418 2445 4.957759 AAAACAAGCAAGTTCGTACTGT 57.042 36.364 0.00 0.00 34.01 3.55
2419 2446 5.328691 TGAAAAACAAGCAAGTTCGTACTG 58.671 37.500 0.00 0.00 34.01 2.74
2420 2447 5.554822 TGAAAAACAAGCAAGTTCGTACT 57.445 34.783 0.00 0.00 35.68 2.73
2421 2448 6.908284 TGTATGAAAAACAAGCAAGTTCGTAC 59.092 34.615 0.00 0.00 39.50 3.67
2422 2449 7.017498 TGTATGAAAAACAAGCAAGTTCGTA 57.983 32.000 0.00 0.00 0.00 3.43
2423 2450 5.885881 TGTATGAAAAACAAGCAAGTTCGT 58.114 33.333 0.00 0.00 0.00 3.85
2424 2451 6.804534 TTGTATGAAAAACAAGCAAGTTCG 57.195 33.333 0.00 0.00 33.13 3.95
2470 2497 5.684704 TGAGAACAGAAAATCCAAGACTGT 58.315 37.500 0.00 0.00 42.40 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.