Multiple sequence alignment - TraesCS2D01G229600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G229600 chr2D 100.000 3080 0 0 1 3080 199355342 199358421 0.000000e+00 5688
1 TraesCS2D01G229600 chr2D 91.026 468 41 1 2614 3080 265357141 265356674 5.600000e-177 630
2 TraesCS2D01G229600 chr2D 90.598 468 43 1 2614 3080 199386527 199386994 1.210000e-173 619
3 TraesCS2D01G229600 chr2D 90.426 470 42 3 2614 3080 286872791 286873260 1.570000e-172 616
4 TraesCS2D01G229600 chr2B 98.003 2554 32 9 1 2545 375543718 375546261 0.000000e+00 4416
5 TraesCS2D01G229600 chr2A 97.881 2548 39 7 1 2545 219148066 219150601 0.000000e+00 4392
6 TraesCS2D01G229600 chr7A 90.737 475 39 4 2610 3080 317289005 317289478 2.020000e-176 628
7 TraesCS2D01G229600 chr1B 90.792 467 43 0 2614 3080 285926302 285925836 2.610000e-175 625
8 TraesCS2D01G229600 chr1D 90.753 465 42 1 2613 3076 186488029 186488493 1.210000e-173 619
9 TraesCS2D01G229600 chr6D 90.405 469 43 2 2614 3080 167647349 167646881 1.570000e-172 616
10 TraesCS2D01G229600 chr6D 90.364 467 44 1 2614 3079 244293798 244293332 2.030000e-171 612
11 TraesCS2D01G229600 chr4D 90.234 471 44 2 2612 3080 238895296 238895766 5.640000e-172 614


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G229600 chr2D 199355342 199358421 3079 False 5688 5688 100.000 1 3080 1 chr2D.!!$F1 3079
1 TraesCS2D01G229600 chr2B 375543718 375546261 2543 False 4416 4416 98.003 1 2545 1 chr2B.!!$F1 2544
2 TraesCS2D01G229600 chr2A 219148066 219150601 2535 False 4392 4392 97.881 1 2545 1 chr2A.!!$F1 2544

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
525 528 6.868339 AGTTGTTTGCATTTTATCAAGCCTAC 59.132 34.615 0.0 0.0 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2155 2164 3.019564 GGCACAGACCAAGCAAGATAAT 58.98 45.455 0.0 0.0 0.0 1.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
322 323 9.593134 TTAACACATAAAATTTCTTGTGCTTGT 57.407 25.926 23.23 13.89 42.45 3.16
353 356 7.371875 CGTGATGCTCTTTTTCGAATCTATTTC 59.628 37.037 0.00 0.00 0.00 2.17
525 528 6.868339 AGTTGTTTGCATTTTATCAAGCCTAC 59.132 34.615 0.00 0.00 0.00 3.18
1146 1155 2.485582 CGCATCGACTCTGTCCGT 59.514 61.111 0.00 0.00 0.00 4.69
1227 1236 3.462678 GAGGCCGTGGTCTCCTCC 61.463 72.222 9.41 0.00 40.68 4.30
2134 2143 7.815068 CGCTGTTATATATAACTCTTTGCCTCT 59.185 37.037 27.68 0.00 42.32 3.69
2143 2152 4.170468 ACTCTTTGCCTCTTTTTCTCCA 57.830 40.909 0.00 0.00 0.00 3.86
2153 2162 5.279758 GCCTCTTTTTCTCCACTCTTCTACT 60.280 44.000 0.00 0.00 0.00 2.57
2154 2163 6.742926 GCCTCTTTTTCTCCACTCTTCTACTT 60.743 42.308 0.00 0.00 0.00 2.24
2155 2164 7.525692 GCCTCTTTTTCTCCACTCTTCTACTTA 60.526 40.741 0.00 0.00 0.00 2.24
2175 2184 5.355350 ACTTATTATCTTGCTTGGTCTGTGC 59.645 40.000 0.00 0.00 0.00 4.57
2196 2205 7.112122 TGTGCCTGTCTGTAATAATTTCTCAT 58.888 34.615 0.00 0.00 0.00 2.90
2197 2206 8.264347 TGTGCCTGTCTGTAATAATTTCTCATA 58.736 33.333 0.00 0.00 0.00 2.15
2248 2257 3.904800 TCAGTTCGGAGATGCCAAATA 57.095 42.857 0.00 0.00 35.04 1.40
2357 2366 6.503560 TTTCTTGGTAGAAACCCTAGTGAA 57.496 37.500 0.00 0.00 46.16 3.18
2540 2549 1.069973 TGTTCATTCGCTTGCTTGTCG 60.070 47.619 0.00 0.00 0.00 4.35
2541 2550 1.069906 GTTCATTCGCTTGCTTGTCGT 60.070 47.619 0.00 0.00 0.00 4.34
2542 2551 0.790207 TCATTCGCTTGCTTGTCGTC 59.210 50.000 0.00 0.00 0.00 4.20
2544 2553 1.626654 ATTCGCTTGCTTGTCGTCCG 61.627 55.000 0.00 0.00 0.00 4.79
2545 2554 4.430423 CGCTTGCTTGTCGTCCGC 62.430 66.667 0.00 0.00 0.00 5.54
2546 2555 4.090057 GCTTGCTTGTCGTCCGCC 62.090 66.667 0.00 0.00 0.00 6.13
2547 2556 3.777925 CTTGCTTGTCGTCCGCCG 61.778 66.667 0.00 0.00 38.13 6.46
2556 2565 4.524318 CGTCCGCCGGGCTTACAT 62.524 66.667 18.34 0.00 0.00 2.29
2557 2566 2.816718 GTCCGCCGGGCTTACATA 59.183 61.111 18.34 0.00 0.00 2.29
2558 2567 1.370064 GTCCGCCGGGCTTACATAT 59.630 57.895 18.34 0.00 0.00 1.78
2559 2568 0.604578 GTCCGCCGGGCTTACATATA 59.395 55.000 18.34 0.00 0.00 0.86
2560 2569 1.206371 GTCCGCCGGGCTTACATATAT 59.794 52.381 18.34 0.00 0.00 0.86
2561 2570 1.903860 TCCGCCGGGCTTACATATATT 59.096 47.619 18.34 0.00 0.00 1.28
2562 2571 2.006888 CCGCCGGGCTTACATATATTG 58.993 52.381 18.34 0.00 0.00 1.90
2563 2572 2.354303 CCGCCGGGCTTACATATATTGA 60.354 50.000 18.34 0.00 0.00 2.57
2564 2573 3.331150 CGCCGGGCTTACATATATTGAA 58.669 45.455 18.34 0.00 0.00 2.69
2565 2574 3.938963 CGCCGGGCTTACATATATTGAAT 59.061 43.478 18.34 0.00 0.00 2.57
2566 2575 5.113383 CGCCGGGCTTACATATATTGAATA 58.887 41.667 18.34 0.00 0.00 1.75
2567 2576 5.234329 CGCCGGGCTTACATATATTGAATAG 59.766 44.000 18.34 0.00 0.00 1.73
2568 2577 5.527582 GCCGGGCTTACATATATTGAATAGG 59.472 44.000 12.87 0.00 0.00 2.57
2569 2578 5.527582 CCGGGCTTACATATATTGAATAGGC 59.472 44.000 0.00 0.00 0.00 3.93
2570 2579 6.112734 CGGGCTTACATATATTGAATAGGCA 58.887 40.000 0.00 0.00 32.26 4.75
2571 2580 6.258727 CGGGCTTACATATATTGAATAGGCAG 59.741 42.308 0.00 0.00 32.26 4.85
2572 2581 7.112779 GGGCTTACATATATTGAATAGGCAGT 58.887 38.462 0.00 0.00 32.26 4.40
2573 2582 7.066284 GGGCTTACATATATTGAATAGGCAGTG 59.934 40.741 0.00 0.00 32.26 3.66
2574 2583 7.607991 GGCTTACATATATTGAATAGGCAGTGT 59.392 37.037 0.00 0.00 0.00 3.55
2575 2584 9.653287 GCTTACATATATTGAATAGGCAGTGTA 57.347 33.333 0.00 0.00 0.00 2.90
2579 2588 8.870116 ACATATATTGAATAGGCAGTGTAGACA 58.130 33.333 0.00 0.00 0.00 3.41
2580 2589 9.144747 CATATATTGAATAGGCAGTGTAGACAC 57.855 37.037 4.58 4.58 46.77 3.67
2599 2608 3.886044 TCGCTGTGAACAACGAGAT 57.114 47.368 4.92 0.00 39.21 2.75
2600 2609 2.148916 TCGCTGTGAACAACGAGATT 57.851 45.000 4.92 0.00 39.21 2.40
2601 2610 2.479837 TCGCTGTGAACAACGAGATTT 58.520 42.857 4.92 0.00 39.21 2.17
2602 2611 3.644823 TCGCTGTGAACAACGAGATTTA 58.355 40.909 4.92 0.00 39.21 1.40
2603 2612 3.673338 TCGCTGTGAACAACGAGATTTAG 59.327 43.478 4.92 0.00 39.21 1.85
2604 2613 3.428870 CGCTGTGAACAACGAGATTTAGT 59.571 43.478 0.00 0.00 37.62 2.24
2605 2614 4.619760 CGCTGTGAACAACGAGATTTAGTA 59.380 41.667 0.00 0.00 37.62 1.82
2606 2615 5.220043 CGCTGTGAACAACGAGATTTAGTAG 60.220 44.000 0.00 0.00 37.62 2.57
2607 2616 5.634020 GCTGTGAACAACGAGATTTAGTAGT 59.366 40.000 0.00 0.00 0.00 2.73
2608 2617 6.183359 GCTGTGAACAACGAGATTTAGTAGTC 60.183 42.308 0.00 0.00 0.00 2.59
2609 2618 5.854866 TGTGAACAACGAGATTTAGTAGTCG 59.145 40.000 0.00 0.00 38.40 4.18
2615 2624 5.368256 ACGAGATTTAGTAGTCGTTGTGT 57.632 39.130 0.00 0.00 42.81 3.72
2616 2625 5.388944 ACGAGATTTAGTAGTCGTTGTGTC 58.611 41.667 0.00 0.00 42.81 3.67
2617 2626 4.491241 CGAGATTTAGTAGTCGTTGTGTCG 59.509 45.833 0.00 0.00 0.00 4.35
2618 2627 5.368256 AGATTTAGTAGTCGTTGTGTCGT 57.632 39.130 0.00 0.00 0.00 4.34
2619 2628 5.152097 AGATTTAGTAGTCGTTGTGTCGTG 58.848 41.667 0.00 0.00 0.00 4.35
2620 2629 2.975410 TAGTAGTCGTTGTGTCGTGG 57.025 50.000 0.00 0.00 0.00 4.94
2621 2630 0.313043 AGTAGTCGTTGTGTCGTGGG 59.687 55.000 0.00 0.00 0.00 4.61
2622 2631 0.311790 GTAGTCGTTGTGTCGTGGGA 59.688 55.000 0.00 0.00 0.00 4.37
2623 2632 1.031235 TAGTCGTTGTGTCGTGGGAA 58.969 50.000 0.00 0.00 0.00 3.97
2624 2633 0.176219 AGTCGTTGTGTCGTGGGAAA 59.824 50.000 0.00 0.00 0.00 3.13
2625 2634 1.008329 GTCGTTGTGTCGTGGGAAAA 58.992 50.000 0.00 0.00 0.00 2.29
2626 2635 1.008329 TCGTTGTGTCGTGGGAAAAC 58.992 50.000 0.00 0.00 0.00 2.43
2627 2636 0.727970 CGTTGTGTCGTGGGAAAACA 59.272 50.000 0.00 0.00 0.00 2.83
2628 2637 1.530236 CGTTGTGTCGTGGGAAAACAC 60.530 52.381 0.00 0.00 42.80 3.32
2634 2643 2.725641 GTGGGAAAACACGGCCAC 59.274 61.111 2.24 0.00 0.00 5.01
2635 2644 2.519780 TGGGAAAACACGGCCACC 60.520 61.111 2.24 0.00 0.00 4.61
2636 2645 2.203437 GGGAAAACACGGCCACCT 60.203 61.111 2.24 0.00 0.00 4.00
2637 2646 1.073548 GGGAAAACACGGCCACCTA 59.926 57.895 2.24 0.00 0.00 3.08
2638 2647 0.323087 GGGAAAACACGGCCACCTAT 60.323 55.000 2.24 0.00 0.00 2.57
2639 2648 0.808755 GGAAAACACGGCCACCTATG 59.191 55.000 2.24 0.00 0.00 2.23
2648 2657 3.672913 CCACCTATGGGGCCATCA 58.327 61.111 4.39 2.02 43.04 3.07
2649 2658 1.457604 CCACCTATGGGGCCATCAG 59.542 63.158 4.39 0.00 43.04 2.90
2650 2659 1.228367 CACCTATGGGGCCATCAGC 60.228 63.158 4.39 0.00 39.10 4.26
2659 2668 2.757099 GCCATCAGCCCCTTGTGG 60.757 66.667 0.00 0.00 34.35 4.17
2660 2669 2.765969 CCATCAGCCCCTTGTGGT 59.234 61.111 0.00 0.00 0.00 4.16
2661 2670 1.077265 CCATCAGCCCCTTGTGGTT 59.923 57.895 0.00 0.00 0.00 3.67
2662 2671 0.967380 CCATCAGCCCCTTGTGGTTC 60.967 60.000 0.00 0.00 0.00 3.62
2663 2672 1.002134 ATCAGCCCCTTGTGGTTCG 60.002 57.895 0.00 0.00 0.00 3.95
2664 2673 2.484287 ATCAGCCCCTTGTGGTTCGG 62.484 60.000 0.00 0.00 0.00 4.30
2665 2674 4.660938 AGCCCCTTGTGGTTCGGC 62.661 66.667 0.00 0.00 38.13 5.54
2666 2675 4.966787 GCCCCTTGTGGTTCGGCA 62.967 66.667 0.00 0.00 37.88 5.69
2667 2676 2.672996 CCCCTTGTGGTTCGGCAG 60.673 66.667 0.00 0.00 0.00 4.85
2668 2677 2.672996 CCCTTGTGGTTCGGCAGG 60.673 66.667 0.00 0.00 0.00 4.85
2669 2678 2.672996 CCTTGTGGTTCGGCAGGG 60.673 66.667 0.00 0.00 0.00 4.45
2670 2679 2.672996 CTTGTGGTTCGGCAGGGG 60.673 66.667 0.00 0.00 0.00 4.79
2671 2680 4.278513 TTGTGGTTCGGCAGGGGG 62.279 66.667 0.00 0.00 0.00 5.40
2673 2682 3.961414 GTGGTTCGGCAGGGGGAA 61.961 66.667 0.00 0.00 0.00 3.97
2674 2683 3.646715 TGGTTCGGCAGGGGGAAG 61.647 66.667 0.00 0.00 0.00 3.46
2675 2684 3.327404 GGTTCGGCAGGGGGAAGA 61.327 66.667 0.00 0.00 0.00 2.87
2676 2685 2.269241 GTTCGGCAGGGGGAAGAG 59.731 66.667 0.00 0.00 0.00 2.85
2677 2686 3.717294 TTCGGCAGGGGGAAGAGC 61.717 66.667 0.00 0.00 0.00 4.09
2679 2688 4.785453 CGGCAGGGGGAAGAGCAC 62.785 72.222 0.00 0.00 0.00 4.40
2680 2689 3.650950 GGCAGGGGGAAGAGCACA 61.651 66.667 0.00 0.00 0.00 4.57
2681 2690 2.679716 GCAGGGGGAAGAGCACAT 59.320 61.111 0.00 0.00 0.00 3.21
2682 2691 1.000396 GCAGGGGGAAGAGCACATT 60.000 57.895 0.00 0.00 0.00 2.71
2683 2692 1.318158 GCAGGGGGAAGAGCACATTG 61.318 60.000 0.00 0.00 0.00 2.82
2684 2693 1.000396 AGGGGGAAGAGCACATTGC 60.000 57.895 0.00 0.00 45.46 3.56
2694 2703 2.427360 GCACATTGCACAAAGAGCG 58.573 52.632 0.00 0.00 44.26 5.03
2695 2704 1.005294 GCACATTGCACAAAGAGCGG 61.005 55.000 0.00 0.00 44.26 5.52
2696 2705 0.592637 CACATTGCACAAAGAGCGGA 59.407 50.000 0.00 0.00 33.85 5.54
2697 2706 0.877071 ACATTGCACAAAGAGCGGAG 59.123 50.000 0.00 0.00 33.85 4.63
2698 2707 1.159285 CATTGCACAAAGAGCGGAGA 58.841 50.000 0.00 0.00 33.85 3.71
2699 2708 1.129998 CATTGCACAAAGAGCGGAGAG 59.870 52.381 0.00 0.00 33.85 3.20
2717 2726 3.090656 CGCAGAGCAGCATGTCAG 58.909 61.111 0.00 0.00 39.31 3.51
2718 2727 2.792599 GCAGAGCAGCATGTCAGC 59.207 61.111 0.00 0.00 39.31 4.26
2719 2728 3.090656 CAGAGCAGCATGTCAGCG 58.909 61.111 0.00 0.00 39.31 5.18
2720 2729 1.447314 CAGAGCAGCATGTCAGCGA 60.447 57.895 0.00 0.00 39.31 4.93
2721 2730 0.810426 CAGAGCAGCATGTCAGCGAT 60.810 55.000 0.00 0.00 39.31 4.58
2722 2731 0.530211 AGAGCAGCATGTCAGCGATC 60.530 55.000 0.00 0.00 39.31 3.69
2723 2732 0.808847 GAGCAGCATGTCAGCGATCA 60.809 55.000 0.00 0.00 39.31 2.92
2724 2733 1.088340 AGCAGCATGTCAGCGATCAC 61.088 55.000 0.00 0.00 39.31 3.06
2725 2734 1.363885 GCAGCATGTCAGCGATCACA 61.364 55.000 0.00 0.00 39.31 3.58
2726 2735 0.372679 CAGCATGTCAGCGATCACAC 59.627 55.000 0.00 0.00 40.15 3.82
2727 2736 1.080435 AGCATGTCAGCGATCACACG 61.080 55.000 0.00 0.00 40.15 4.49
2728 2737 2.001357 CATGTCAGCGATCACACGG 58.999 57.895 0.00 0.00 0.00 4.94
2729 2738 1.153568 ATGTCAGCGATCACACGGG 60.154 57.895 0.00 0.00 0.00 5.28
2730 2739 3.188786 GTCAGCGATCACACGGGC 61.189 66.667 0.00 0.00 0.00 6.13
2731 2740 3.690280 TCAGCGATCACACGGGCA 61.690 61.111 0.00 0.00 0.00 5.36
2732 2741 3.190849 CAGCGATCACACGGGCAG 61.191 66.667 0.00 0.00 0.00 4.85
2733 2742 3.695606 AGCGATCACACGGGCAGT 61.696 61.111 0.00 0.00 0.00 4.40
2734 2743 2.742372 GCGATCACACGGGCAGTT 60.742 61.111 0.00 0.00 0.00 3.16
2735 2744 2.325082 GCGATCACACGGGCAGTTT 61.325 57.895 0.00 0.00 0.00 2.66
2736 2745 1.852067 GCGATCACACGGGCAGTTTT 61.852 55.000 0.00 0.00 0.00 2.43
2737 2746 1.434555 CGATCACACGGGCAGTTTTA 58.565 50.000 0.00 0.00 0.00 1.52
2738 2747 1.127951 CGATCACACGGGCAGTTTTAC 59.872 52.381 0.00 0.00 0.00 2.01
2739 2748 1.467342 GATCACACGGGCAGTTTTACC 59.533 52.381 0.00 0.00 0.00 2.85
2740 2749 0.535553 TCACACGGGCAGTTTTACCC 60.536 55.000 0.00 0.00 43.25 3.69
2745 2754 3.450282 GGGCAGTTTTACCCAGGTT 57.550 52.632 0.00 0.00 46.22 3.50
2746 2755 1.254026 GGGCAGTTTTACCCAGGTTC 58.746 55.000 0.00 0.00 46.22 3.62
2747 2756 0.879090 GGCAGTTTTACCCAGGTTCG 59.121 55.000 0.00 0.00 0.00 3.95
2748 2757 0.879090 GCAGTTTTACCCAGGTTCGG 59.121 55.000 0.00 0.00 0.00 4.30
2781 2790 5.369409 GGTATAAAACCCTACTCCTGCTT 57.631 43.478 0.00 0.00 43.16 3.91
2782 2791 5.752650 GGTATAAAACCCTACTCCTGCTTT 58.247 41.667 0.00 0.00 43.16 3.51
2783 2792 5.589050 GGTATAAAACCCTACTCCTGCTTTG 59.411 44.000 0.00 0.00 43.16 2.77
2784 2793 2.586648 AAACCCTACTCCTGCTTTGG 57.413 50.000 0.00 0.00 0.00 3.28
2785 2794 1.446016 AACCCTACTCCTGCTTTGGT 58.554 50.000 0.00 0.00 0.00 3.67
2786 2795 0.693049 ACCCTACTCCTGCTTTGGTG 59.307 55.000 0.00 0.00 0.00 4.17
2787 2796 0.035056 CCCTACTCCTGCTTTGGTGG 60.035 60.000 0.00 0.00 0.00 4.61
2788 2797 0.984230 CCTACTCCTGCTTTGGTGGA 59.016 55.000 0.00 0.00 0.00 4.02
2789 2798 1.561542 CCTACTCCTGCTTTGGTGGAT 59.438 52.381 0.00 0.00 0.00 3.41
2790 2799 2.025887 CCTACTCCTGCTTTGGTGGATT 60.026 50.000 0.00 0.00 0.00 3.01
2791 2800 1.915141 ACTCCTGCTTTGGTGGATTG 58.085 50.000 0.00 0.00 0.00 2.67
2792 2801 1.425066 ACTCCTGCTTTGGTGGATTGA 59.575 47.619 0.00 0.00 0.00 2.57
2793 2802 2.042162 ACTCCTGCTTTGGTGGATTGAT 59.958 45.455 0.00 0.00 0.00 2.57
2794 2803 2.426024 CTCCTGCTTTGGTGGATTGATG 59.574 50.000 0.00 0.00 0.00 3.07
2795 2804 2.041485 TCCTGCTTTGGTGGATTGATGA 59.959 45.455 0.00 0.00 0.00 2.92
2796 2805 2.426024 CCTGCTTTGGTGGATTGATGAG 59.574 50.000 0.00 0.00 0.00 2.90
2797 2806 3.349927 CTGCTTTGGTGGATTGATGAGA 58.650 45.455 0.00 0.00 0.00 3.27
2798 2807 3.349927 TGCTTTGGTGGATTGATGAGAG 58.650 45.455 0.00 0.00 0.00 3.20
2799 2808 2.686915 GCTTTGGTGGATTGATGAGAGG 59.313 50.000 0.00 0.00 0.00 3.69
2800 2809 3.623203 GCTTTGGTGGATTGATGAGAGGA 60.623 47.826 0.00 0.00 0.00 3.71
2801 2810 3.634397 TTGGTGGATTGATGAGAGGAC 57.366 47.619 0.00 0.00 0.00 3.85
2802 2811 1.839994 TGGTGGATTGATGAGAGGACC 59.160 52.381 0.00 0.00 0.00 4.46
2803 2812 1.202580 GGTGGATTGATGAGAGGACCG 60.203 57.143 0.00 0.00 0.00 4.79
2804 2813 1.482593 GTGGATTGATGAGAGGACCGT 59.517 52.381 0.00 0.00 0.00 4.83
2805 2814 2.693591 GTGGATTGATGAGAGGACCGTA 59.306 50.000 0.00 0.00 0.00 4.02
2806 2815 2.959030 TGGATTGATGAGAGGACCGTAG 59.041 50.000 0.00 0.00 0.00 3.51
2807 2816 2.959707 GGATTGATGAGAGGACCGTAGT 59.040 50.000 0.00 0.00 0.00 2.73
2808 2817 3.243569 GGATTGATGAGAGGACCGTAGTG 60.244 52.174 0.00 0.00 0.00 2.74
2809 2818 1.763968 TGATGAGAGGACCGTAGTGG 58.236 55.000 0.00 0.00 46.41 4.00
2810 2819 1.283905 TGATGAGAGGACCGTAGTGGA 59.716 52.381 0.00 0.00 42.00 4.02
2811 2820 1.950909 GATGAGAGGACCGTAGTGGAG 59.049 57.143 0.00 0.00 42.00 3.86
2812 2821 0.989602 TGAGAGGACCGTAGTGGAGA 59.010 55.000 0.00 0.00 42.00 3.71
2813 2822 1.339824 TGAGAGGACCGTAGTGGAGAC 60.340 57.143 0.00 0.00 42.00 3.36
2814 2823 0.392729 AGAGGACCGTAGTGGAGACG 60.393 60.000 0.00 0.00 42.00 4.18
2815 2824 0.676151 GAGGACCGTAGTGGAGACGT 60.676 60.000 0.00 0.00 42.00 4.34
2816 2825 0.959372 AGGACCGTAGTGGAGACGTG 60.959 60.000 0.00 0.00 42.00 4.49
2817 2826 1.505353 GACCGTAGTGGAGACGTGG 59.495 63.158 0.00 0.00 42.00 4.94
2818 2827 1.228367 ACCGTAGTGGAGACGTGGT 60.228 57.895 0.00 0.00 42.00 4.16
2819 2828 1.211969 CCGTAGTGGAGACGTGGTG 59.788 63.158 0.00 0.00 42.00 4.17
2820 2829 1.443872 CGTAGTGGAGACGTGGTGC 60.444 63.158 0.00 0.00 35.58 5.01
2821 2830 1.863662 CGTAGTGGAGACGTGGTGCT 61.864 60.000 0.00 0.00 35.58 4.40
2822 2831 0.109226 GTAGTGGAGACGTGGTGCTC 60.109 60.000 0.00 0.00 0.00 4.26
2823 2832 0.251209 TAGTGGAGACGTGGTGCTCT 60.251 55.000 0.00 0.00 0.00 4.09
2824 2833 0.251209 AGTGGAGACGTGGTGCTCTA 60.251 55.000 0.00 0.00 0.00 2.43
2825 2834 0.171455 GTGGAGACGTGGTGCTCTAG 59.829 60.000 0.00 0.00 0.00 2.43
2826 2835 1.139947 GGAGACGTGGTGCTCTAGC 59.860 63.158 0.00 0.00 42.50 3.42
2827 2836 1.139947 GAGACGTGGTGCTCTAGCC 59.860 63.158 0.00 0.00 41.18 3.93
2828 2837 2.184579 GACGTGGTGCTCTAGCCC 59.815 66.667 0.00 1.32 41.18 5.19
2829 2838 3.701604 GACGTGGTGCTCTAGCCCG 62.702 68.421 0.00 0.00 41.18 6.13
2830 2839 4.514577 CGTGGTGCTCTAGCCCGG 62.515 72.222 0.00 0.00 41.18 5.73
2831 2840 4.840005 GTGGTGCTCTAGCCCGGC 62.840 72.222 0.00 0.00 41.18 6.13
2833 2842 4.096003 GGTGCTCTAGCCCGGCAA 62.096 66.667 13.15 0.00 41.18 4.52
2834 2843 2.512515 GTGCTCTAGCCCGGCAAG 60.513 66.667 13.15 7.13 41.18 4.01
2835 2844 3.785859 TGCTCTAGCCCGGCAAGG 61.786 66.667 13.15 0.91 41.18 3.61
2836 2845 3.787001 GCTCTAGCCCGGCAAGGT 61.787 66.667 13.15 0.00 38.74 3.50
2837 2846 2.990479 CTCTAGCCCGGCAAGGTT 59.010 61.111 13.15 0.00 38.74 3.50
2838 2847 1.450312 CTCTAGCCCGGCAAGGTTG 60.450 63.158 13.15 0.00 38.74 3.77
2848 2857 2.672996 CAAGGTTGCCTCGGGGTG 60.673 66.667 1.62 0.00 30.89 4.61
2849 2858 3.966543 AAGGTTGCCTCGGGGTGG 61.967 66.667 1.62 0.00 30.89 4.61
2852 2861 3.961414 GTTGCCTCGGGGTGGGAA 61.961 66.667 1.62 0.00 32.52 3.97
2853 2862 3.961414 TTGCCTCGGGGTGGGAAC 61.961 66.667 1.62 0.00 29.97 3.62
2855 2864 4.410400 GCCTCGGGGTGGGAACAG 62.410 72.222 1.62 0.00 44.46 3.16
2863 2872 3.488090 GTGGGAACAGCTACGCGC 61.488 66.667 5.73 0.00 44.46 6.86
2864 2873 4.752879 TGGGAACAGCTACGCGCC 62.753 66.667 5.73 0.00 40.39 6.53
2865 2874 4.452733 GGGAACAGCTACGCGCCT 62.453 66.667 5.73 0.00 40.39 5.52
2866 2875 2.493030 GGAACAGCTACGCGCCTA 59.507 61.111 5.73 0.00 40.39 3.93
2867 2876 1.067582 GGAACAGCTACGCGCCTAT 59.932 57.895 5.73 0.00 40.39 2.57
2868 2877 1.215655 GGAACAGCTACGCGCCTATG 61.216 60.000 5.73 2.80 40.39 2.23
2869 2878 0.248907 GAACAGCTACGCGCCTATGA 60.249 55.000 5.73 0.00 40.39 2.15
2870 2879 0.249073 AACAGCTACGCGCCTATGAG 60.249 55.000 5.73 0.00 40.39 2.90
2871 2880 1.360551 CAGCTACGCGCCTATGAGT 59.639 57.895 5.73 0.00 40.39 3.41
2872 2881 0.936764 CAGCTACGCGCCTATGAGTG 60.937 60.000 5.73 0.00 40.39 3.51
2873 2882 1.065928 GCTACGCGCCTATGAGTGT 59.934 57.895 5.73 0.00 38.58 3.55
2874 2883 0.309922 GCTACGCGCCTATGAGTGTA 59.690 55.000 5.73 0.00 36.40 2.90
2875 2884 1.068472 GCTACGCGCCTATGAGTGTAT 60.068 52.381 5.73 0.00 36.80 2.29
2876 2885 2.161012 GCTACGCGCCTATGAGTGTATA 59.839 50.000 5.73 0.00 36.80 1.47
2877 2886 3.365666 GCTACGCGCCTATGAGTGTATAA 60.366 47.826 5.73 0.00 36.80 0.98
2878 2887 3.284323 ACGCGCCTATGAGTGTATAAG 57.716 47.619 5.73 0.00 33.01 1.73
2879 2888 2.030185 ACGCGCCTATGAGTGTATAAGG 60.030 50.000 5.73 0.00 33.01 2.69
2880 2889 2.671351 CGCGCCTATGAGTGTATAAGGG 60.671 54.545 0.00 0.00 0.00 3.95
2881 2890 2.299297 GCGCCTATGAGTGTATAAGGGT 59.701 50.000 0.00 0.00 0.00 4.34
2882 2891 3.614390 GCGCCTATGAGTGTATAAGGGTC 60.614 52.174 0.00 0.00 0.00 4.46
2883 2892 3.056749 CGCCTATGAGTGTATAAGGGTCC 60.057 52.174 0.00 0.00 0.00 4.46
2884 2893 3.056749 GCCTATGAGTGTATAAGGGTCCG 60.057 52.174 0.00 0.00 0.00 4.79
2885 2894 4.404640 CCTATGAGTGTATAAGGGTCCGA 58.595 47.826 0.00 0.00 0.00 4.55
2886 2895 4.831155 CCTATGAGTGTATAAGGGTCCGAA 59.169 45.833 0.00 0.00 0.00 4.30
2887 2896 5.480772 CCTATGAGTGTATAAGGGTCCGAAT 59.519 44.000 0.00 0.00 0.00 3.34
2888 2897 4.931661 TGAGTGTATAAGGGTCCGAATC 57.068 45.455 0.00 0.00 0.00 2.52
2889 2898 3.640029 TGAGTGTATAAGGGTCCGAATCC 59.360 47.826 0.00 0.00 0.00 3.01
2890 2899 3.896272 GAGTGTATAAGGGTCCGAATCCT 59.104 47.826 0.00 0.00 34.29 3.24
2891 2900 4.296056 AGTGTATAAGGGTCCGAATCCTT 58.704 43.478 0.00 0.00 44.68 3.36
2892 2901 4.344390 AGTGTATAAGGGTCCGAATCCTTC 59.656 45.833 0.00 0.00 41.95 3.46
2893 2902 3.644738 TGTATAAGGGTCCGAATCCTTCC 59.355 47.826 0.00 0.00 41.95 3.46
2894 2903 2.563039 TAAGGGTCCGAATCCTTCCT 57.437 50.000 0.00 0.00 41.95 3.36
2895 2904 2.563039 AAGGGTCCGAATCCTTCCTA 57.437 50.000 0.00 0.00 38.94 2.94
2896 2905 2.563039 AGGGTCCGAATCCTTCCTAA 57.437 50.000 0.00 0.00 0.00 2.69
2897 2906 2.399580 AGGGTCCGAATCCTTCCTAAG 58.600 52.381 0.00 0.00 0.00 2.18
2906 2915 2.854522 CCTTCCTAAGGTTGCCACG 58.145 57.895 0.00 0.00 43.95 4.94
2907 2916 0.323629 CCTTCCTAAGGTTGCCACGA 59.676 55.000 0.00 0.00 43.95 4.35
2908 2917 1.439679 CTTCCTAAGGTTGCCACGAC 58.560 55.000 0.00 0.00 0.00 4.34
2909 2918 0.035739 TTCCTAAGGTTGCCACGACC 59.964 55.000 0.00 0.00 37.44 4.79
2910 2919 1.376812 CCTAAGGTTGCCACGACCC 60.377 63.158 0.17 0.00 37.93 4.46
2911 2920 1.677552 CTAAGGTTGCCACGACCCT 59.322 57.895 0.17 0.00 37.93 4.34
2912 2921 0.391263 CTAAGGTTGCCACGACCCTC 60.391 60.000 0.17 0.00 37.93 4.30
2913 2922 1.833787 TAAGGTTGCCACGACCCTCC 61.834 60.000 0.17 0.00 37.93 4.30
2914 2923 3.637273 GGTTGCCACGACCCTCCT 61.637 66.667 0.00 0.00 0.00 3.69
2915 2924 2.430367 GTTGCCACGACCCTCCTT 59.570 61.111 0.00 0.00 0.00 3.36
2916 2925 1.228154 GTTGCCACGACCCTCCTTT 60.228 57.895 0.00 0.00 0.00 3.11
2917 2926 0.822121 GTTGCCACGACCCTCCTTTT 60.822 55.000 0.00 0.00 0.00 2.27
2918 2927 0.766131 TTGCCACGACCCTCCTTTTA 59.234 50.000 0.00 0.00 0.00 1.52
2919 2928 0.988832 TGCCACGACCCTCCTTTTAT 59.011 50.000 0.00 0.00 0.00 1.40
2920 2929 2.189676 TGCCACGACCCTCCTTTTATA 58.810 47.619 0.00 0.00 0.00 0.98
2921 2930 2.169769 TGCCACGACCCTCCTTTTATAG 59.830 50.000 0.00 0.00 0.00 1.31
2922 2931 2.433239 GCCACGACCCTCCTTTTATAGA 59.567 50.000 0.00 0.00 0.00 1.98
2923 2932 3.071167 GCCACGACCCTCCTTTTATAGAT 59.929 47.826 0.00 0.00 0.00 1.98
2924 2933 4.799917 GCCACGACCCTCCTTTTATAGATC 60.800 50.000 0.00 0.00 0.00 2.75
2925 2934 4.344102 CCACGACCCTCCTTTTATAGATCA 59.656 45.833 0.00 0.00 0.00 2.92
2926 2935 5.163343 CCACGACCCTCCTTTTATAGATCAA 60.163 44.000 0.00 0.00 0.00 2.57
2927 2936 5.986135 CACGACCCTCCTTTTATAGATCAAG 59.014 44.000 0.00 0.00 0.00 3.02
2928 2937 5.070580 ACGACCCTCCTTTTATAGATCAAGG 59.929 44.000 2.95 2.95 38.83 3.61
2929 2938 5.511545 CGACCCTCCTTTTATAGATCAAGGG 60.512 48.000 8.49 2.59 38.13 3.95
2930 2939 4.665483 ACCCTCCTTTTATAGATCAAGGGG 59.335 45.833 8.84 5.51 37.85 4.79
2931 2940 4.665483 CCCTCCTTTTATAGATCAAGGGGT 59.335 45.833 7.64 0.00 36.53 4.95
2932 2941 5.221945 CCCTCCTTTTATAGATCAAGGGGTC 60.222 48.000 7.64 0.00 36.53 4.46
2933 2942 5.369699 CCTCCTTTTATAGATCAAGGGGTCA 59.630 44.000 7.64 0.00 36.53 4.02
2934 2943 6.248569 TCCTTTTATAGATCAAGGGGTCAC 57.751 41.667 8.49 0.00 38.13 3.67
2935 2944 5.132144 TCCTTTTATAGATCAAGGGGTCACC 59.868 44.000 8.49 0.00 38.13 4.02
2936 2945 5.104109 CCTTTTATAGATCAAGGGGTCACCA 60.104 44.000 0.00 0.00 43.89 4.17
2937 2946 5.367945 TTTATAGATCAAGGGGTCACCAC 57.632 43.478 0.00 0.00 43.89 4.16
2938 2947 2.335681 TAGATCAAGGGGTCACCACA 57.664 50.000 0.00 0.00 43.89 4.17
2939 2948 1.444933 AGATCAAGGGGTCACCACAA 58.555 50.000 0.00 0.00 43.89 3.33
2940 2949 1.995542 AGATCAAGGGGTCACCACAAT 59.004 47.619 0.00 0.00 43.89 2.71
2941 2950 2.094675 GATCAAGGGGTCACCACAATG 58.905 52.381 0.00 0.00 43.89 2.82
2942 2951 0.112218 TCAAGGGGTCACCACAATGG 59.888 55.000 0.00 0.00 45.02 3.16
2943 2952 1.228862 AAGGGGTCACCACAATGGC 60.229 57.895 0.00 0.00 42.67 4.40
2944 2953 2.017668 AAGGGGTCACCACAATGGCA 62.018 55.000 0.00 0.00 42.67 4.92
2945 2954 1.532794 GGGGTCACCACAATGGCAA 60.533 57.895 0.00 0.00 42.67 4.52
2946 2955 1.118356 GGGGTCACCACAATGGCAAA 61.118 55.000 0.00 0.00 42.67 3.68
2947 2956 0.975887 GGGTCACCACAATGGCAAAT 59.024 50.000 0.00 0.00 42.67 2.32
2948 2957 1.066929 GGGTCACCACAATGGCAAATC 60.067 52.381 0.00 0.00 42.67 2.17
2949 2958 1.617850 GGTCACCACAATGGCAAATCA 59.382 47.619 0.00 0.00 42.67 2.57
2950 2959 2.353011 GGTCACCACAATGGCAAATCAG 60.353 50.000 0.00 0.00 42.67 2.90
2951 2960 2.297033 GTCACCACAATGGCAAATCAGT 59.703 45.455 0.00 0.00 42.67 3.41
2952 2961 2.557924 TCACCACAATGGCAAATCAGTC 59.442 45.455 0.00 0.00 42.67 3.51
2953 2962 2.296752 CACCACAATGGCAAATCAGTCA 59.703 45.455 0.00 0.00 42.67 3.41
2954 2963 3.056393 CACCACAATGGCAAATCAGTCAT 60.056 43.478 0.00 0.00 42.67 3.06
2955 2964 3.579586 ACCACAATGGCAAATCAGTCATT 59.420 39.130 0.00 0.00 44.09 2.57
2959 2968 4.877378 AATGGCAAATCAGTCATTGTGT 57.123 36.364 0.00 0.00 41.87 3.72
2960 2969 5.981088 AATGGCAAATCAGTCATTGTGTA 57.019 34.783 0.00 0.00 41.87 2.90
2961 2970 4.764679 TGGCAAATCAGTCATTGTGTAC 57.235 40.909 0.00 0.00 0.00 2.90
2962 2971 4.397420 TGGCAAATCAGTCATTGTGTACT 58.603 39.130 0.00 0.00 0.00 2.73
2963 2972 4.216042 TGGCAAATCAGTCATTGTGTACTG 59.784 41.667 0.00 0.00 43.63 2.74
2974 2983 7.666531 GTCATTGTGTACTGACTAGATAACG 57.333 40.000 0.00 0.00 38.94 3.18
2975 2984 7.470079 GTCATTGTGTACTGACTAGATAACGA 58.530 38.462 0.00 0.00 38.94 3.85
2976 2985 7.966753 GTCATTGTGTACTGACTAGATAACGAA 59.033 37.037 0.00 0.00 38.94 3.85
2977 2986 7.966753 TCATTGTGTACTGACTAGATAACGAAC 59.033 37.037 0.00 0.00 0.00 3.95
2978 2987 6.806388 TGTGTACTGACTAGATAACGAACA 57.194 37.500 0.00 0.00 0.00 3.18
2979 2988 6.839033 TGTGTACTGACTAGATAACGAACAG 58.161 40.000 0.00 0.00 0.00 3.16
2980 2989 6.429078 TGTGTACTGACTAGATAACGAACAGT 59.571 38.462 0.00 0.00 39.74 3.55
2981 2990 6.741811 GTGTACTGACTAGATAACGAACAGTG 59.258 42.308 0.00 0.00 37.61 3.66
2982 2991 4.734917 ACTGACTAGATAACGAACAGTGC 58.265 43.478 0.00 0.00 36.11 4.40
2983 2992 4.459685 ACTGACTAGATAACGAACAGTGCT 59.540 41.667 0.00 0.00 36.11 4.40
2984 2993 5.646793 ACTGACTAGATAACGAACAGTGCTA 59.353 40.000 0.00 0.00 36.11 3.49
2985 2994 6.319152 ACTGACTAGATAACGAACAGTGCTAT 59.681 38.462 0.00 0.00 36.11 2.97
2986 2995 6.726230 TGACTAGATAACGAACAGTGCTATC 58.274 40.000 0.00 0.00 0.00 2.08
2987 2996 6.317893 TGACTAGATAACGAACAGTGCTATCA 59.682 38.462 0.00 0.00 29.26 2.15
2988 2997 7.013369 TGACTAGATAACGAACAGTGCTATCAT 59.987 37.037 0.00 0.00 29.26 2.45
2989 2998 8.392372 ACTAGATAACGAACAGTGCTATCATA 57.608 34.615 0.00 0.00 29.26 2.15
2990 2999 8.291032 ACTAGATAACGAACAGTGCTATCATAC 58.709 37.037 0.00 0.00 29.26 2.39
2991 3000 6.448006 AGATAACGAACAGTGCTATCATACC 58.552 40.000 0.00 0.00 29.26 2.73
2992 3001 4.737855 AACGAACAGTGCTATCATACCT 57.262 40.909 0.00 0.00 0.00 3.08
2993 3002 5.847111 AACGAACAGTGCTATCATACCTA 57.153 39.130 0.00 0.00 0.00 3.08
2994 3003 5.847111 ACGAACAGTGCTATCATACCTAA 57.153 39.130 0.00 0.00 0.00 2.69
2995 3004 5.589192 ACGAACAGTGCTATCATACCTAAC 58.411 41.667 0.00 0.00 0.00 2.34
2996 3005 5.360144 ACGAACAGTGCTATCATACCTAACT 59.640 40.000 0.00 0.00 0.00 2.24
2997 3006 5.915758 CGAACAGTGCTATCATACCTAACTC 59.084 44.000 0.00 0.00 0.00 3.01
2998 3007 6.238786 CGAACAGTGCTATCATACCTAACTCT 60.239 42.308 0.00 0.00 0.00 3.24
2999 3008 6.398234 ACAGTGCTATCATACCTAACTCTG 57.602 41.667 0.00 0.00 0.00 3.35
3000 3009 5.221342 ACAGTGCTATCATACCTAACTCTGC 60.221 44.000 0.00 0.00 0.00 4.26
3001 3010 4.895889 AGTGCTATCATACCTAACTCTGCA 59.104 41.667 0.00 0.00 0.00 4.41
3002 3011 5.010516 AGTGCTATCATACCTAACTCTGCAG 59.989 44.000 7.63 7.63 0.00 4.41
3003 3012 5.010112 GTGCTATCATACCTAACTCTGCAGA 59.990 44.000 17.19 17.19 0.00 4.26
3004 3013 5.010112 TGCTATCATACCTAACTCTGCAGAC 59.990 44.000 13.74 0.00 0.00 3.51
3005 3014 5.010112 GCTATCATACCTAACTCTGCAGACA 59.990 44.000 13.74 0.00 0.00 3.41
3006 3015 4.991153 TCATACCTAACTCTGCAGACAG 57.009 45.455 13.74 6.89 45.95 3.51
3007 3016 3.701542 TCATACCTAACTCTGCAGACAGG 59.298 47.826 23.61 23.61 44.59 4.00
3008 3017 2.310779 ACCTAACTCTGCAGACAGGA 57.689 50.000 28.70 10.64 44.59 3.86
3009 3018 1.896465 ACCTAACTCTGCAGACAGGAC 59.104 52.381 28.70 0.00 44.59 3.85
3010 3019 1.895798 CCTAACTCTGCAGACAGGACA 59.104 52.381 21.93 0.00 44.59 4.02
3011 3020 2.300152 CCTAACTCTGCAGACAGGACAA 59.700 50.000 21.93 0.00 44.59 3.18
3012 3021 2.540265 AACTCTGCAGACAGGACAAG 57.460 50.000 13.74 2.78 44.59 3.16
3013 3022 0.683973 ACTCTGCAGACAGGACAAGG 59.316 55.000 13.74 1.98 44.59 3.61
3014 3023 0.673022 CTCTGCAGACAGGACAAGGC 60.673 60.000 13.74 0.00 44.59 4.35
3015 3024 2.031012 TGCAGACAGGACAAGGCG 59.969 61.111 0.00 0.00 0.00 5.52
3016 3025 3.426568 GCAGACAGGACAAGGCGC 61.427 66.667 0.00 0.00 0.00 6.53
3017 3026 2.031012 CAGACAGGACAAGGCGCA 59.969 61.111 10.83 0.00 0.00 6.09
3018 3027 1.376424 CAGACAGGACAAGGCGCAT 60.376 57.895 10.83 0.00 0.00 4.73
3019 3028 0.957395 CAGACAGGACAAGGCGCATT 60.957 55.000 10.83 5.20 0.00 3.56
3020 3029 0.613260 AGACAGGACAAGGCGCATTA 59.387 50.000 7.11 0.00 0.00 1.90
3021 3030 1.003118 AGACAGGACAAGGCGCATTAA 59.997 47.619 7.11 0.00 0.00 1.40
3022 3031 1.810151 GACAGGACAAGGCGCATTAAA 59.190 47.619 7.11 0.00 0.00 1.52
3023 3032 2.423538 GACAGGACAAGGCGCATTAAAT 59.576 45.455 7.11 0.00 0.00 1.40
3024 3033 2.164219 ACAGGACAAGGCGCATTAAATG 59.836 45.455 7.11 6.94 0.00 2.32
3037 3046 4.258935 CATTAAATGCGTCGCTTAGTGT 57.741 40.909 19.50 0.00 0.00 3.55
3038 3047 3.984018 TTAAATGCGTCGCTTAGTGTC 57.016 42.857 19.50 0.00 0.00 3.67
3039 3048 1.790755 AAATGCGTCGCTTAGTGTCA 58.209 45.000 19.50 0.00 0.00 3.58
3040 3049 1.068474 AATGCGTCGCTTAGTGTCAC 58.932 50.000 19.50 0.00 0.00 3.67
3041 3050 0.038618 ATGCGTCGCTTAGTGTCACA 60.039 50.000 19.50 0.00 0.00 3.58
3042 3051 0.038618 TGCGTCGCTTAGTGTCACAT 60.039 50.000 19.50 0.00 0.00 3.21
3043 3052 0.640768 GCGTCGCTTAGTGTCACATC 59.359 55.000 10.68 0.00 0.00 3.06
3044 3053 0.907837 CGTCGCTTAGTGTCACATCG 59.092 55.000 5.62 3.13 0.00 3.84
3045 3054 1.728179 CGTCGCTTAGTGTCACATCGT 60.728 52.381 5.62 0.00 0.00 3.73
3046 3055 2.475022 CGTCGCTTAGTGTCACATCGTA 60.475 50.000 5.62 0.00 0.00 3.43
3047 3056 3.495193 GTCGCTTAGTGTCACATCGTAA 58.505 45.455 5.62 0.00 0.00 3.18
3048 3057 3.300066 GTCGCTTAGTGTCACATCGTAAC 59.700 47.826 5.62 0.00 0.00 2.50
3049 3058 2.275510 CGCTTAGTGTCACATCGTAACG 59.724 50.000 5.62 0.00 0.00 3.18
3050 3059 2.027688 GCTTAGTGTCACATCGTAACGC 59.972 50.000 5.62 0.00 0.00 4.84
3051 3060 2.993449 TAGTGTCACATCGTAACGCA 57.007 45.000 5.62 0.00 0.00 5.24
3052 3061 1.698165 AGTGTCACATCGTAACGCAG 58.302 50.000 5.62 0.00 0.00 5.18
3053 3062 0.093026 GTGTCACATCGTAACGCAGC 59.907 55.000 0.00 0.00 0.00 5.25
3054 3063 1.011968 TGTCACATCGTAACGCAGCC 61.012 55.000 0.00 0.00 0.00 4.85
3055 3064 1.447140 TCACATCGTAACGCAGCCC 60.447 57.895 0.00 0.00 0.00 5.19
3056 3065 2.508439 ACATCGTAACGCAGCCCG 60.508 61.111 0.00 0.00 44.21 6.13
3057 3066 2.202690 CATCGTAACGCAGCCCGA 60.203 61.111 1.04 0.00 41.02 5.14
3058 3067 2.202703 ATCGTAACGCAGCCCGAC 60.203 61.111 1.04 0.00 41.02 4.79
3059 3068 2.997075 ATCGTAACGCAGCCCGACA 61.997 57.895 1.04 0.00 41.02 4.35
3060 3069 2.495366 ATCGTAACGCAGCCCGACAA 62.495 55.000 1.04 0.00 41.02 3.18
3061 3070 2.726691 CGTAACGCAGCCCGACAAG 61.727 63.158 1.04 0.00 41.02 3.16
3062 3071 2.740826 TAACGCAGCCCGACAAGC 60.741 61.111 1.04 0.00 41.02 4.01
3066 3075 3.741476 GCAGCCCGACAAGCCTTG 61.741 66.667 2.11 2.11 0.00 3.61
3067 3076 3.741476 CAGCCCGACAAGCCTTGC 61.741 66.667 3.88 0.00 0.00 4.01
3073 3082 3.056328 GACAAGCCTTGCCGGGTC 61.056 66.667 2.18 0.00 44.41 4.46
3076 3085 4.265056 AAGCCTTGCCGGGTCGTT 62.265 61.111 2.18 0.00 44.41 3.85
3077 3086 4.699522 AGCCTTGCCGGGTCGTTC 62.700 66.667 2.18 0.00 40.09 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
263 264 5.394883 CCAATCAAGCAGCAAAAGGTGATAT 60.395 40.000 0.00 0.00 0.00 1.63
264 265 4.082081 CCAATCAAGCAGCAAAAGGTGATA 60.082 41.667 0.00 0.00 0.00 2.15
322 323 3.993736 TCGAAAAAGAGCATCACGATTCA 59.006 39.130 0.00 0.00 37.82 2.57
525 528 5.240891 AGAATCCGGTGATACAAGCATATG 58.759 41.667 0.00 0.00 0.00 1.78
764 767 6.501781 CCTGCTTCCATTTCTCAATTCATAC 58.498 40.000 0.00 0.00 0.00 2.39
765 768 5.068198 GCCTGCTTCCATTTCTCAATTCATA 59.932 40.000 0.00 0.00 0.00 2.15
995 1004 2.821366 GGGAGCACGACATGGCTG 60.821 66.667 0.00 0.00 41.22 4.85
1146 1155 1.542472 TCCGTGATCTTCTGCGTGTTA 59.458 47.619 0.00 0.00 0.00 2.41
2143 2152 8.763601 ACCAAGCAAGATAATAAGTAGAAGAGT 58.236 33.333 0.00 0.00 0.00 3.24
2153 2162 4.640201 GGCACAGACCAAGCAAGATAATAA 59.360 41.667 0.00 0.00 0.00 1.40
2154 2163 4.080356 AGGCACAGACCAAGCAAGATAATA 60.080 41.667 0.00 0.00 0.00 0.98
2155 2164 3.019564 GGCACAGACCAAGCAAGATAAT 58.980 45.455 0.00 0.00 0.00 1.28
2357 2366 6.440647 TGAATGACTACTAAGTGAGGACCATT 59.559 38.462 0.00 0.00 35.56 3.16
2540 2549 0.604578 TATATGTAAGCCCGGCGGAC 59.395 55.000 30.79 18.19 0.00 4.79
2541 2550 1.563924 ATATATGTAAGCCCGGCGGA 58.436 50.000 30.79 6.30 0.00 5.54
2542 2551 2.006888 CAATATATGTAAGCCCGGCGG 58.993 52.381 21.46 21.46 0.00 6.13
2544 2553 5.527582 CCTATTCAATATATGTAAGCCCGGC 59.472 44.000 0.00 0.00 0.00 6.13
2545 2554 5.527582 GCCTATTCAATATATGTAAGCCCGG 59.472 44.000 0.00 0.00 0.00 5.73
2546 2555 6.112734 TGCCTATTCAATATATGTAAGCCCG 58.887 40.000 0.00 0.00 0.00 6.13
2547 2556 7.066284 CACTGCCTATTCAATATATGTAAGCCC 59.934 40.741 0.00 0.00 0.00 5.19
2548 2557 7.607991 ACACTGCCTATTCAATATATGTAAGCC 59.392 37.037 0.00 0.00 0.00 4.35
2549 2558 8.553459 ACACTGCCTATTCAATATATGTAAGC 57.447 34.615 0.00 0.00 0.00 3.09
2553 2562 8.870116 TGTCTACACTGCCTATTCAATATATGT 58.130 33.333 0.00 0.00 0.00 2.29
2554 2563 9.144747 GTGTCTACACTGCCTATTCAATATATG 57.855 37.037 5.99 0.00 43.25 1.78
2583 2592 4.992381 ACTAAATCTCGTTGTTCACAGC 57.008 40.909 0.00 0.00 0.00 4.40
2584 2593 6.032565 CGACTACTAAATCTCGTTGTTCACAG 59.967 42.308 0.00 0.00 0.00 3.66
2585 2594 5.854866 CGACTACTAAATCTCGTTGTTCACA 59.145 40.000 0.00 0.00 0.00 3.58
2586 2595 5.855395 ACGACTACTAAATCTCGTTGTTCAC 59.145 40.000 0.00 0.00 35.93 3.18
2587 2596 6.005583 ACGACTACTAAATCTCGTTGTTCA 57.994 37.500 0.00 0.00 35.93 3.18
2588 2597 6.924629 AACGACTACTAAATCTCGTTGTTC 57.075 37.500 3.65 0.00 45.18 3.18
2593 2602 5.368256 ACACAACGACTACTAAATCTCGT 57.632 39.130 0.00 0.00 41.00 4.18
2594 2603 4.491241 CGACACAACGACTACTAAATCTCG 59.509 45.833 0.00 0.00 35.09 4.04
2595 2604 5.283247 CACGACACAACGACTACTAAATCTC 59.717 44.000 0.00 0.00 37.03 2.75
2596 2605 5.152097 CACGACACAACGACTACTAAATCT 58.848 41.667 0.00 0.00 37.03 2.40
2597 2606 4.322804 CCACGACACAACGACTACTAAATC 59.677 45.833 0.00 0.00 37.03 2.17
2598 2607 4.232221 CCACGACACAACGACTACTAAAT 58.768 43.478 0.00 0.00 37.03 1.40
2599 2608 3.550639 CCCACGACACAACGACTACTAAA 60.551 47.826 0.00 0.00 37.03 1.85
2600 2609 2.030893 CCCACGACACAACGACTACTAA 60.031 50.000 0.00 0.00 37.03 2.24
2601 2610 1.536766 CCCACGACACAACGACTACTA 59.463 52.381 0.00 0.00 37.03 1.82
2602 2611 0.313043 CCCACGACACAACGACTACT 59.687 55.000 0.00 0.00 37.03 2.57
2603 2612 0.311790 TCCCACGACACAACGACTAC 59.688 55.000 0.00 0.00 37.03 2.73
2604 2613 1.031235 TTCCCACGACACAACGACTA 58.969 50.000 0.00 0.00 37.03 2.59
2605 2614 0.176219 TTTCCCACGACACAACGACT 59.824 50.000 0.00 0.00 37.03 4.18
2606 2615 1.008329 TTTTCCCACGACACAACGAC 58.992 50.000 0.00 0.00 37.03 4.34
2607 2616 1.008329 GTTTTCCCACGACACAACGA 58.992 50.000 0.00 0.00 37.03 3.85
2608 2617 0.727970 TGTTTTCCCACGACACAACG 59.272 50.000 0.00 0.00 39.31 4.10
2609 2618 2.182904 GTGTTTTCCCACGACACAAC 57.817 50.000 0.00 0.00 42.36 3.32
2617 2626 2.725641 GTGGCCGTGTTTTCCCAC 59.274 61.111 0.00 0.00 40.71 4.61
2618 2627 1.706995 TAGGTGGCCGTGTTTTCCCA 61.707 55.000 0.00 0.00 0.00 4.37
2619 2628 0.323087 ATAGGTGGCCGTGTTTTCCC 60.323 55.000 0.00 0.00 0.00 3.97
2620 2629 0.808755 CATAGGTGGCCGTGTTTTCC 59.191 55.000 0.00 0.00 0.00 3.13
2621 2630 0.808755 CCATAGGTGGCCGTGTTTTC 59.191 55.000 0.00 0.00 39.01 2.29
2622 2631 0.610785 CCCATAGGTGGCCGTGTTTT 60.611 55.000 0.00 0.00 44.62 2.43
2623 2632 1.001393 CCCATAGGTGGCCGTGTTT 60.001 57.895 0.00 0.00 44.62 2.83
2624 2633 2.674754 CCCATAGGTGGCCGTGTT 59.325 61.111 0.00 0.00 44.62 3.32
2625 2634 3.407967 CCCCATAGGTGGCCGTGT 61.408 66.667 0.00 0.00 44.62 4.49
2626 2635 4.875713 GCCCCATAGGTGGCCGTG 62.876 72.222 0.00 0.00 44.62 4.94
2630 2639 2.116125 GATGGCCCCATAGGTGGC 59.884 66.667 0.00 0.00 44.62 5.01
2631 2640 1.457604 CTGATGGCCCCATAGGTGG 59.542 63.158 0.00 0.00 45.61 4.61
2632 2641 1.228367 GCTGATGGCCCCATAGGTG 60.228 63.158 0.00 0.00 36.70 4.00
2633 2642 3.255032 GCTGATGGCCCCATAGGT 58.745 61.111 0.00 0.00 36.70 3.08
2642 2651 2.757099 CCACAAGGGGCTGATGGC 60.757 66.667 0.00 0.00 40.90 4.40
2643 2652 0.967380 GAACCACAAGGGGCTGATGG 60.967 60.000 0.00 0.00 42.91 3.51
2644 2653 1.308069 CGAACCACAAGGGGCTGATG 61.308 60.000 0.00 0.00 42.91 3.07
2645 2654 1.002134 CGAACCACAAGGGGCTGAT 60.002 57.895 0.00 0.00 42.91 2.90
2646 2655 2.429930 CGAACCACAAGGGGCTGA 59.570 61.111 0.00 0.00 42.91 4.26
2647 2656 2.672996 CCGAACCACAAGGGGCTG 60.673 66.667 0.00 0.00 42.91 4.85
2648 2657 4.660938 GCCGAACCACAAGGGGCT 62.661 66.667 0.00 0.00 42.91 5.19
2649 2658 4.966787 TGCCGAACCACAAGGGGC 62.967 66.667 0.00 0.00 42.91 5.80
2650 2659 2.672996 CTGCCGAACCACAAGGGG 60.673 66.667 0.00 0.00 42.91 4.79
2651 2660 2.672996 CCTGCCGAACCACAAGGG 60.673 66.667 0.00 0.00 44.81 3.95
2652 2661 2.672996 CCCTGCCGAACCACAAGG 60.673 66.667 0.00 0.00 42.21 3.61
2653 2662 2.672996 CCCCTGCCGAACCACAAG 60.673 66.667 0.00 0.00 0.00 3.16
2654 2663 4.278513 CCCCCTGCCGAACCACAA 62.279 66.667 0.00 0.00 0.00 3.33
2656 2665 3.920093 CTTCCCCCTGCCGAACCAC 62.920 68.421 0.00 0.00 0.00 4.16
2657 2666 3.646715 CTTCCCCCTGCCGAACCA 61.647 66.667 0.00 0.00 0.00 3.67
2658 2667 3.327404 TCTTCCCCCTGCCGAACC 61.327 66.667 0.00 0.00 0.00 3.62
2659 2668 2.269241 CTCTTCCCCCTGCCGAAC 59.731 66.667 0.00 0.00 0.00 3.95
2660 2669 3.717294 GCTCTTCCCCCTGCCGAA 61.717 66.667 0.00 0.00 0.00 4.30
2662 2671 4.785453 GTGCTCTTCCCCCTGCCG 62.785 72.222 0.00 0.00 0.00 5.69
2663 2672 2.505364 AATGTGCTCTTCCCCCTGCC 62.505 60.000 0.00 0.00 0.00 4.85
2664 2673 1.000396 AATGTGCTCTTCCCCCTGC 60.000 57.895 0.00 0.00 0.00 4.85
2665 2674 1.318158 GCAATGTGCTCTTCCCCCTG 61.318 60.000 0.00 0.00 40.96 4.45
2666 2675 1.000396 GCAATGTGCTCTTCCCCCT 60.000 57.895 0.00 0.00 40.96 4.79
2667 2676 1.304381 TGCAATGTGCTCTTCCCCC 60.304 57.895 1.43 0.00 45.31 5.40
2668 2677 0.895100 TGTGCAATGTGCTCTTCCCC 60.895 55.000 1.43 0.00 45.31 4.81
2669 2678 0.961019 TTGTGCAATGTGCTCTTCCC 59.039 50.000 1.43 0.00 45.31 3.97
2670 2679 2.294233 TCTTTGTGCAATGTGCTCTTCC 59.706 45.455 1.43 0.00 45.31 3.46
2671 2680 3.562505 CTCTTTGTGCAATGTGCTCTTC 58.437 45.455 1.43 0.00 45.31 2.87
2672 2681 2.288030 GCTCTTTGTGCAATGTGCTCTT 60.288 45.455 13.76 0.00 45.31 2.85
2673 2682 1.268899 GCTCTTTGTGCAATGTGCTCT 59.731 47.619 13.76 0.00 45.31 4.09
2674 2683 1.694639 GCTCTTTGTGCAATGTGCTC 58.305 50.000 13.76 0.00 45.31 4.26
2675 2684 0.039798 CGCTCTTTGTGCAATGTGCT 60.040 50.000 16.78 0.00 45.31 4.40
2676 2685 1.005294 CCGCTCTTTGTGCAATGTGC 61.005 55.000 12.02 12.02 45.29 4.57
2677 2686 0.592637 TCCGCTCTTTGTGCAATGTG 59.407 50.000 0.00 0.00 0.00 3.21
2678 2687 0.877071 CTCCGCTCTTTGTGCAATGT 59.123 50.000 0.00 0.00 0.00 2.71
2679 2688 1.129998 CTCTCCGCTCTTTGTGCAATG 59.870 52.381 0.00 0.00 0.00 2.82
2680 2689 1.446907 CTCTCCGCTCTTTGTGCAAT 58.553 50.000 0.00 0.00 0.00 3.56
2681 2690 1.230635 GCTCTCCGCTCTTTGTGCAA 61.231 55.000 0.00 0.00 35.14 4.08
2682 2691 1.669115 GCTCTCCGCTCTTTGTGCA 60.669 57.895 0.00 0.00 35.14 4.57
2683 2692 2.734673 CGCTCTCCGCTCTTTGTGC 61.735 63.158 0.00 0.00 36.13 4.57
2684 2693 3.468007 CGCTCTCCGCTCTTTGTG 58.532 61.111 0.00 0.00 36.13 3.33
2694 2703 3.736732 ATGCTGCTCTGCGCTCTCC 62.737 63.158 9.73 0.00 40.11 3.71
2695 2704 2.202905 ATGCTGCTCTGCGCTCTC 60.203 61.111 9.73 0.00 40.11 3.20
2696 2705 2.511829 CATGCTGCTCTGCGCTCT 60.512 61.111 9.73 0.00 40.11 4.09
2697 2706 2.811066 GACATGCTGCTCTGCGCTC 61.811 63.158 9.73 0.00 40.11 5.03
2698 2707 2.818714 GACATGCTGCTCTGCGCT 60.819 61.111 9.73 0.00 40.11 5.92
2699 2708 3.097137 CTGACATGCTGCTCTGCGC 62.097 63.158 0.00 0.00 39.77 6.09
2700 2709 3.090656 CTGACATGCTGCTCTGCG 58.909 61.111 0.00 0.00 35.36 5.18
2701 2710 2.792599 GCTGACATGCTGCTCTGC 59.207 61.111 0.00 2.36 38.32 4.26
2702 2711 0.810426 ATCGCTGACATGCTGCTCTG 60.810 55.000 0.00 1.05 39.10 3.35
2703 2712 0.530211 GATCGCTGACATGCTGCTCT 60.530 55.000 0.00 4.63 39.10 4.09
2704 2713 0.808847 TGATCGCTGACATGCTGCTC 60.809 55.000 0.00 8.39 39.10 4.26
2705 2714 1.088340 GTGATCGCTGACATGCTGCT 61.088 55.000 0.00 1.05 39.10 4.24
2706 2715 1.351012 GTGATCGCTGACATGCTGC 59.649 57.895 0.00 0.73 38.02 5.25
2707 2716 0.372679 GTGTGATCGCTGACATGCTG 59.627 55.000 7.94 0.00 0.00 4.41
2708 2717 1.080435 CGTGTGATCGCTGACATGCT 61.080 55.000 7.94 0.00 0.00 3.79
2709 2718 1.346197 CGTGTGATCGCTGACATGC 59.654 57.895 7.94 0.00 0.00 4.06
2710 2719 1.423721 CCCGTGTGATCGCTGACATG 61.424 60.000 7.94 2.17 0.00 3.21
2711 2720 1.153568 CCCGTGTGATCGCTGACAT 60.154 57.895 7.94 0.00 0.00 3.06
2712 2721 2.261361 CCCGTGTGATCGCTGACA 59.739 61.111 7.94 0.00 0.00 3.58
2713 2722 3.188786 GCCCGTGTGATCGCTGAC 61.189 66.667 7.94 0.00 0.00 3.51
2714 2723 3.647649 CTGCCCGTGTGATCGCTGA 62.648 63.158 7.94 0.00 0.00 4.26
2715 2724 3.190849 CTGCCCGTGTGATCGCTG 61.191 66.667 7.94 0.00 0.00 5.18
2716 2725 2.731691 AAACTGCCCGTGTGATCGCT 62.732 55.000 7.94 0.00 0.00 4.93
2717 2726 1.852067 AAAACTGCCCGTGTGATCGC 61.852 55.000 0.00 0.00 0.00 4.58
2718 2727 1.127951 GTAAAACTGCCCGTGTGATCG 59.872 52.381 0.00 0.00 0.00 3.69
2719 2728 1.467342 GGTAAAACTGCCCGTGTGATC 59.533 52.381 0.00 0.00 0.00 2.92
2720 2729 1.530323 GGTAAAACTGCCCGTGTGAT 58.470 50.000 0.00 0.00 0.00 3.06
2721 2730 0.535553 GGGTAAAACTGCCCGTGTGA 60.536 55.000 0.00 0.00 34.90 3.58
2722 2731 1.953772 GGGTAAAACTGCCCGTGTG 59.046 57.895 0.00 0.00 34.90 3.82
2723 2732 4.486887 GGGTAAAACTGCCCGTGT 57.513 55.556 0.00 0.00 34.90 4.49
2727 2736 1.254026 GAACCTGGGTAAAACTGCCC 58.746 55.000 0.00 0.00 45.04 5.36
2728 2737 0.879090 CGAACCTGGGTAAAACTGCC 59.121 55.000 0.00 0.00 0.00 4.85
2729 2738 0.879090 CCGAACCTGGGTAAAACTGC 59.121 55.000 0.00 0.00 0.00 4.40
2730 2739 1.530323 CCCGAACCTGGGTAAAACTG 58.470 55.000 0.00 0.00 44.76 3.16
2747 2756 2.653953 TTTATACCTCGCGGCAGCCC 62.654 60.000 6.13 0.00 41.18 5.19
2748 2757 0.812412 TTTTATACCTCGCGGCAGCC 60.812 55.000 6.13 0.00 41.18 4.85
2749 2758 0.303796 GTTTTATACCTCGCGGCAGC 59.696 55.000 6.13 0.00 40.74 5.25
2750 2759 0.935196 GGTTTTATACCTCGCGGCAG 59.065 55.000 6.13 0.00 44.10 4.85
2751 2760 0.462403 GGGTTTTATACCTCGCGGCA 60.462 55.000 6.13 0.00 46.86 5.69
2752 2761 0.179065 AGGGTTTTATACCTCGCGGC 60.179 55.000 6.13 0.00 46.86 6.53
2753 2762 2.363359 AGTAGGGTTTTATACCTCGCGG 59.637 50.000 6.13 0.00 46.86 6.46
2754 2763 3.551659 GGAGTAGGGTTTTATACCTCGCG 60.552 52.174 0.00 0.00 46.86 5.87
2755 2764 3.640498 AGGAGTAGGGTTTTATACCTCGC 59.360 47.826 0.00 0.00 46.86 5.03
2756 2765 4.501058 GCAGGAGTAGGGTTTTATACCTCG 60.501 50.000 0.00 0.00 46.86 4.63
2757 2766 4.654724 AGCAGGAGTAGGGTTTTATACCTC 59.345 45.833 0.00 0.00 46.86 3.85
2758 2767 4.632292 AGCAGGAGTAGGGTTTTATACCT 58.368 43.478 0.00 0.00 46.86 3.08
2759 2768 5.369409 AAGCAGGAGTAGGGTTTTATACC 57.631 43.478 0.00 0.00 46.99 2.73
2760 2769 5.589050 CCAAAGCAGGAGTAGGGTTTTATAC 59.411 44.000 0.00 0.00 32.89 1.47
2761 2770 5.252164 ACCAAAGCAGGAGTAGGGTTTTATA 59.748 40.000 0.00 0.00 32.89 0.98
2762 2771 4.044191 ACCAAAGCAGGAGTAGGGTTTTAT 59.956 41.667 0.00 0.00 32.89 1.40
2763 2772 3.396611 ACCAAAGCAGGAGTAGGGTTTTA 59.603 43.478 0.00 0.00 32.89 1.52
2764 2773 2.177016 ACCAAAGCAGGAGTAGGGTTTT 59.823 45.455 0.00 0.00 32.89 2.43
2765 2774 1.780919 ACCAAAGCAGGAGTAGGGTTT 59.219 47.619 0.00 0.00 35.30 3.27
2766 2775 1.073923 CACCAAAGCAGGAGTAGGGTT 59.926 52.381 0.00 0.00 0.00 4.11
2767 2776 0.693049 CACCAAAGCAGGAGTAGGGT 59.307 55.000 0.00 0.00 0.00 4.34
2768 2777 0.035056 CCACCAAAGCAGGAGTAGGG 60.035 60.000 0.00 0.00 0.00 3.53
2769 2778 0.984230 TCCACCAAAGCAGGAGTAGG 59.016 55.000 0.00 0.00 0.00 3.18
2770 2779 3.012518 CAATCCACCAAAGCAGGAGTAG 58.987 50.000 0.00 0.00 34.40 2.57
2771 2780 2.642311 TCAATCCACCAAAGCAGGAGTA 59.358 45.455 0.00 0.00 34.40 2.59
2772 2781 1.425066 TCAATCCACCAAAGCAGGAGT 59.575 47.619 0.00 0.00 34.40 3.85
2773 2782 2.205022 TCAATCCACCAAAGCAGGAG 57.795 50.000 0.00 0.00 34.40 3.69
2774 2783 2.041485 TCATCAATCCACCAAAGCAGGA 59.959 45.455 0.00 0.00 35.59 3.86
2775 2784 2.426024 CTCATCAATCCACCAAAGCAGG 59.574 50.000 0.00 0.00 0.00 4.85
2776 2785 3.349927 TCTCATCAATCCACCAAAGCAG 58.650 45.455 0.00 0.00 0.00 4.24
2777 2786 3.349927 CTCTCATCAATCCACCAAAGCA 58.650 45.455 0.00 0.00 0.00 3.91
2778 2787 2.686915 CCTCTCATCAATCCACCAAAGC 59.313 50.000 0.00 0.00 0.00 3.51
2779 2788 3.944015 GTCCTCTCATCAATCCACCAAAG 59.056 47.826 0.00 0.00 0.00 2.77
2780 2789 3.308402 GGTCCTCTCATCAATCCACCAAA 60.308 47.826 0.00 0.00 0.00 3.28
2781 2790 2.239654 GGTCCTCTCATCAATCCACCAA 59.760 50.000 0.00 0.00 0.00 3.67
2782 2791 1.839994 GGTCCTCTCATCAATCCACCA 59.160 52.381 0.00 0.00 0.00 4.17
2783 2792 1.202580 CGGTCCTCTCATCAATCCACC 60.203 57.143 0.00 0.00 0.00 4.61
2784 2793 1.482593 ACGGTCCTCTCATCAATCCAC 59.517 52.381 0.00 0.00 0.00 4.02
2785 2794 1.866015 ACGGTCCTCTCATCAATCCA 58.134 50.000 0.00 0.00 0.00 3.41
2786 2795 2.959707 ACTACGGTCCTCTCATCAATCC 59.040 50.000 0.00 0.00 0.00 3.01
2787 2796 3.243569 CCACTACGGTCCTCTCATCAATC 60.244 52.174 0.00 0.00 0.00 2.67
2788 2797 2.695666 CCACTACGGTCCTCTCATCAAT 59.304 50.000 0.00 0.00 0.00 2.57
2789 2798 2.100197 CCACTACGGTCCTCTCATCAA 58.900 52.381 0.00 0.00 0.00 2.57
2790 2799 1.283905 TCCACTACGGTCCTCTCATCA 59.716 52.381 0.00 0.00 35.57 3.07
2791 2800 1.950909 CTCCACTACGGTCCTCTCATC 59.049 57.143 0.00 0.00 35.57 2.92
2792 2801 1.564818 TCTCCACTACGGTCCTCTCAT 59.435 52.381 0.00 0.00 35.57 2.90
2793 2802 0.989602 TCTCCACTACGGTCCTCTCA 59.010 55.000 0.00 0.00 35.57 3.27
2794 2803 1.381522 GTCTCCACTACGGTCCTCTC 58.618 60.000 0.00 0.00 35.57 3.20
2795 2804 0.392729 CGTCTCCACTACGGTCCTCT 60.393 60.000 0.00 0.00 36.71 3.69
2796 2805 0.676151 ACGTCTCCACTACGGTCCTC 60.676 60.000 0.00 0.00 44.48 3.71
2797 2806 0.959372 CACGTCTCCACTACGGTCCT 60.959 60.000 0.00 0.00 44.48 3.85
2798 2807 1.505353 CACGTCTCCACTACGGTCC 59.495 63.158 0.00 0.00 44.48 4.46
2799 2808 1.239968 ACCACGTCTCCACTACGGTC 61.240 60.000 0.00 0.00 44.48 4.79
2800 2809 1.228367 ACCACGTCTCCACTACGGT 60.228 57.895 0.00 0.00 44.48 4.83
2801 2810 1.211969 CACCACGTCTCCACTACGG 59.788 63.158 0.00 0.00 44.48 4.02
2802 2811 1.443872 GCACCACGTCTCCACTACG 60.444 63.158 0.00 0.00 45.64 3.51
2803 2812 0.109226 GAGCACCACGTCTCCACTAC 60.109 60.000 0.00 0.00 0.00 2.73
2804 2813 0.251209 AGAGCACCACGTCTCCACTA 60.251 55.000 0.00 0.00 0.00 2.74
2805 2814 0.251209 TAGAGCACCACGTCTCCACT 60.251 55.000 0.00 0.00 0.00 4.00
2806 2815 0.171455 CTAGAGCACCACGTCTCCAC 59.829 60.000 0.00 0.00 0.00 4.02
2807 2816 1.595993 GCTAGAGCACCACGTCTCCA 61.596 60.000 0.00 0.00 41.59 3.86
2808 2817 1.139947 GCTAGAGCACCACGTCTCC 59.860 63.158 0.00 0.00 41.59 3.71
2809 2818 1.139947 GGCTAGAGCACCACGTCTC 59.860 63.158 3.54 0.00 44.36 3.36
2810 2819 2.352032 GGGCTAGAGCACCACGTCT 61.352 63.158 3.54 0.00 44.36 4.18
2811 2820 2.184579 GGGCTAGAGCACCACGTC 59.815 66.667 3.54 0.00 44.36 4.34
2812 2821 3.760035 CGGGCTAGAGCACCACGT 61.760 66.667 3.54 0.00 42.67 4.49
2813 2822 4.514577 CCGGGCTAGAGCACCACG 62.515 72.222 3.54 2.47 42.67 4.94
2814 2823 4.840005 GCCGGGCTAGAGCACCAC 62.840 72.222 12.87 0.00 42.67 4.16
2816 2825 4.096003 TTGCCGGGCTAGAGCACC 62.096 66.667 21.46 1.71 42.67 5.01
2817 2826 2.512515 CTTGCCGGGCTAGAGCAC 60.513 66.667 23.53 0.00 44.36 4.40
2818 2827 3.785859 CCTTGCCGGGCTAGAGCA 61.786 66.667 28.31 0.78 44.36 4.26
2819 2828 3.330992 AACCTTGCCGGGCTAGAGC 62.331 63.158 28.31 0.00 33.57 4.09
2820 2829 1.450312 CAACCTTGCCGGGCTAGAG 60.450 63.158 28.31 20.37 33.57 2.43
2821 2830 2.668632 CAACCTTGCCGGGCTAGA 59.331 61.111 28.31 10.57 33.57 2.43
2831 2840 2.672996 CACCCCGAGGCAACCTTG 60.673 66.667 0.00 0.00 36.11 3.61
2832 2841 3.966543 CCACCCCGAGGCAACCTT 61.967 66.667 0.00 0.00 36.11 3.50
2835 2844 3.961414 TTCCCACCCCGAGGCAAC 61.961 66.667 0.00 0.00 36.11 4.17
2836 2845 3.961414 GTTCCCACCCCGAGGCAA 61.961 66.667 0.00 0.00 36.11 4.52
2838 2847 4.410400 CTGTTCCCACCCCGAGGC 62.410 72.222 0.00 0.00 36.11 4.70
2839 2848 4.410400 GCTGTTCCCACCCCGAGG 62.410 72.222 0.00 0.00 40.04 4.63
2840 2849 1.987855 TAGCTGTTCCCACCCCGAG 60.988 63.158 0.00 0.00 0.00 4.63
2841 2850 2.120940 TAGCTGTTCCCACCCCGA 59.879 61.111 0.00 0.00 0.00 5.14
2842 2851 2.267961 GTAGCTGTTCCCACCCCG 59.732 66.667 0.00 0.00 0.00 5.73
2843 2852 2.267961 CGTAGCTGTTCCCACCCC 59.732 66.667 0.00 0.00 0.00 4.95
2856 2865 2.991434 ATACACTCATAGGCGCGTAG 57.009 50.000 15.72 6.40 0.00 3.51
2857 2866 3.189910 CCTTATACACTCATAGGCGCGTA 59.810 47.826 12.80 12.80 0.00 4.42
2858 2867 2.030185 CCTTATACACTCATAGGCGCGT 60.030 50.000 8.43 8.08 0.00 6.01
2859 2868 2.596452 CCTTATACACTCATAGGCGCG 58.404 52.381 0.00 0.00 0.00 6.86
2860 2869 2.299297 ACCCTTATACACTCATAGGCGC 59.701 50.000 0.00 0.00 0.00 6.53
2861 2870 3.056749 GGACCCTTATACACTCATAGGCG 60.057 52.174 0.00 0.00 0.00 5.52
2862 2871 3.056749 CGGACCCTTATACACTCATAGGC 60.057 52.174 0.00 0.00 0.00 3.93
2863 2872 4.404640 TCGGACCCTTATACACTCATAGG 58.595 47.826 0.00 0.00 0.00 2.57
2864 2873 6.350277 GGATTCGGACCCTTATACACTCATAG 60.350 46.154 0.00 0.00 0.00 2.23
2865 2874 5.479375 GGATTCGGACCCTTATACACTCATA 59.521 44.000 0.00 0.00 0.00 2.15
2866 2875 4.283722 GGATTCGGACCCTTATACACTCAT 59.716 45.833 0.00 0.00 0.00 2.90
2867 2876 3.640029 GGATTCGGACCCTTATACACTCA 59.360 47.826 0.00 0.00 0.00 3.41
2868 2877 3.896272 AGGATTCGGACCCTTATACACTC 59.104 47.826 0.00 0.00 0.00 3.51
2869 2878 3.924922 AGGATTCGGACCCTTATACACT 58.075 45.455 0.00 0.00 0.00 3.55
2870 2879 4.629092 GAAGGATTCGGACCCTTATACAC 58.371 47.826 0.00 0.00 42.43 2.90
2871 2880 4.950205 GAAGGATTCGGACCCTTATACA 57.050 45.455 0.00 0.00 42.43 2.29
2889 2898 1.439679 GTCGTGGCAACCTTAGGAAG 58.560 55.000 4.77 0.00 0.00 3.46
2890 2899 0.035739 GGTCGTGGCAACCTTAGGAA 59.964 55.000 4.77 0.00 33.78 3.36
2891 2900 1.675219 GGTCGTGGCAACCTTAGGA 59.325 57.895 4.77 0.00 33.78 2.94
2892 2901 1.376812 GGGTCGTGGCAACCTTAGG 60.377 63.158 8.20 0.00 36.97 2.69
2893 2902 0.391263 GAGGGTCGTGGCAACCTTAG 60.391 60.000 8.20 0.00 36.97 2.18
2894 2903 1.675219 GAGGGTCGTGGCAACCTTA 59.325 57.895 8.20 0.00 36.97 2.69
2895 2904 2.430367 GAGGGTCGTGGCAACCTT 59.570 61.111 8.20 0.31 36.97 3.50
2896 2905 3.637273 GGAGGGTCGTGGCAACCT 61.637 66.667 8.20 4.81 36.97 3.50
2897 2906 2.692273 AAAGGAGGGTCGTGGCAACC 62.692 60.000 0.00 0.00 35.97 3.77
2898 2907 0.822121 AAAAGGAGGGTCGTGGCAAC 60.822 55.000 0.00 0.00 0.00 4.17
2899 2908 0.766131 TAAAAGGAGGGTCGTGGCAA 59.234 50.000 0.00 0.00 0.00 4.52
2900 2909 0.988832 ATAAAAGGAGGGTCGTGGCA 59.011 50.000 0.00 0.00 0.00 4.92
2901 2910 2.433239 TCTATAAAAGGAGGGTCGTGGC 59.567 50.000 0.00 0.00 0.00 5.01
2902 2911 4.344102 TGATCTATAAAAGGAGGGTCGTGG 59.656 45.833 0.00 0.00 0.00 4.94
2903 2912 5.531122 TGATCTATAAAAGGAGGGTCGTG 57.469 43.478 0.00 0.00 0.00 4.35
2904 2913 5.070580 CCTTGATCTATAAAAGGAGGGTCGT 59.929 44.000 3.21 0.00 42.65 4.34
2905 2914 5.511545 CCCTTGATCTATAAAAGGAGGGTCG 60.512 48.000 9.75 0.00 42.65 4.79
2906 2915 5.221945 CCCCTTGATCTATAAAAGGAGGGTC 60.222 48.000 9.75 0.00 42.65 4.46
2907 2916 4.665483 CCCCTTGATCTATAAAAGGAGGGT 59.335 45.833 9.75 0.00 42.65 4.34
2908 2917 4.665483 ACCCCTTGATCTATAAAAGGAGGG 59.335 45.833 9.75 6.48 42.65 4.30
2909 2918 5.369699 TGACCCCTTGATCTATAAAAGGAGG 59.630 44.000 9.75 10.79 42.65 4.30
2910 2919 6.292150 GTGACCCCTTGATCTATAAAAGGAG 58.708 44.000 9.75 0.39 42.65 3.69
2911 2920 5.132144 GGTGACCCCTTGATCTATAAAAGGA 59.868 44.000 9.75 0.00 42.65 3.36
2912 2921 5.104109 TGGTGACCCCTTGATCTATAAAAGG 60.104 44.000 0.00 2.44 40.21 3.11
2913 2922 5.823045 GTGGTGACCCCTTGATCTATAAAAG 59.177 44.000 0.00 0.00 0.00 2.27
2914 2923 5.251932 TGTGGTGACCCCTTGATCTATAAAA 59.748 40.000 0.00 0.00 0.00 1.52
2915 2924 4.785914 TGTGGTGACCCCTTGATCTATAAA 59.214 41.667 0.00 0.00 0.00 1.40
2916 2925 4.367166 TGTGGTGACCCCTTGATCTATAA 58.633 43.478 0.00 0.00 0.00 0.98
2917 2926 4.002256 TGTGGTGACCCCTTGATCTATA 57.998 45.455 0.00 0.00 0.00 1.31
2918 2927 2.845659 TGTGGTGACCCCTTGATCTAT 58.154 47.619 0.00 0.00 0.00 1.98
2919 2928 2.335681 TGTGGTGACCCCTTGATCTA 57.664 50.000 0.00 0.00 0.00 1.98
2920 2929 1.444933 TTGTGGTGACCCCTTGATCT 58.555 50.000 0.00 0.00 0.00 2.75
2921 2930 2.094675 CATTGTGGTGACCCCTTGATC 58.905 52.381 0.00 0.00 0.00 2.92
2922 2931 1.272648 CCATTGTGGTGACCCCTTGAT 60.273 52.381 0.00 0.00 31.35 2.57
2923 2932 0.112218 CCATTGTGGTGACCCCTTGA 59.888 55.000 0.00 0.00 31.35 3.02
2924 2933 1.535204 GCCATTGTGGTGACCCCTTG 61.535 60.000 0.00 0.00 40.46 3.61
2925 2934 1.228862 GCCATTGTGGTGACCCCTT 60.229 57.895 0.00 0.00 40.46 3.95
2926 2935 2.017668 TTGCCATTGTGGTGACCCCT 62.018 55.000 0.00 0.00 40.46 4.79
2927 2936 1.118356 TTTGCCATTGTGGTGACCCC 61.118 55.000 0.00 0.00 40.46 4.95
2928 2937 0.975887 ATTTGCCATTGTGGTGACCC 59.024 50.000 0.00 0.00 40.46 4.46
2929 2938 1.617850 TGATTTGCCATTGTGGTGACC 59.382 47.619 0.00 0.00 40.46 4.02
2930 2939 2.297033 ACTGATTTGCCATTGTGGTGAC 59.703 45.455 0.00 0.00 40.46 3.67
2931 2940 2.557924 GACTGATTTGCCATTGTGGTGA 59.442 45.455 0.00 0.00 40.46 4.02
2932 2941 2.296752 TGACTGATTTGCCATTGTGGTG 59.703 45.455 0.00 0.00 40.46 4.17
2933 2942 2.596346 TGACTGATTTGCCATTGTGGT 58.404 42.857 0.00 0.00 40.46 4.16
2934 2943 3.880047 ATGACTGATTTGCCATTGTGG 57.120 42.857 0.00 0.00 41.55 4.17
2937 2946 4.562082 ACACAATGACTGATTTGCCATTG 58.438 39.130 0.00 0.00 46.61 2.82
2938 2947 4.877378 ACACAATGACTGATTTGCCATT 57.123 36.364 0.00 0.00 0.00 3.16
2939 2948 5.012239 AGTACACAATGACTGATTTGCCAT 58.988 37.500 0.00 0.00 0.00 4.40
2940 2949 4.216042 CAGTACACAATGACTGATTTGCCA 59.784 41.667 0.00 0.00 44.88 4.92
2941 2950 4.455533 TCAGTACACAATGACTGATTTGCC 59.544 41.667 0.68 0.00 45.49 4.52
2942 2951 5.611796 TCAGTACACAATGACTGATTTGC 57.388 39.130 0.68 0.00 45.49 3.68
2950 2959 7.470079 TCGTTATCTAGTCAGTACACAATGAC 58.530 38.462 5.13 5.13 44.97 3.06
2951 2960 7.619964 TCGTTATCTAGTCAGTACACAATGA 57.380 36.000 0.00 0.00 0.00 2.57
2952 2961 7.753580 TGTTCGTTATCTAGTCAGTACACAATG 59.246 37.037 0.00 0.00 0.00 2.82
2953 2962 7.823665 TGTTCGTTATCTAGTCAGTACACAAT 58.176 34.615 0.00 0.00 0.00 2.71
2954 2963 7.040892 ACTGTTCGTTATCTAGTCAGTACACAA 60.041 37.037 0.00 0.00 33.78 3.33
2955 2964 6.429078 ACTGTTCGTTATCTAGTCAGTACACA 59.571 38.462 0.00 0.00 33.78 3.72
2956 2965 6.741811 CACTGTTCGTTATCTAGTCAGTACAC 59.258 42.308 0.00 0.00 34.11 2.90
2957 2966 6.622245 GCACTGTTCGTTATCTAGTCAGTACA 60.622 42.308 0.00 0.00 34.11 2.90
2958 2967 5.738225 GCACTGTTCGTTATCTAGTCAGTAC 59.262 44.000 0.00 0.00 34.11 2.73
2959 2968 5.646793 AGCACTGTTCGTTATCTAGTCAGTA 59.353 40.000 0.00 0.00 34.11 2.74
2960 2969 4.459685 AGCACTGTTCGTTATCTAGTCAGT 59.540 41.667 0.00 0.00 35.49 3.41
2961 2970 4.987832 AGCACTGTTCGTTATCTAGTCAG 58.012 43.478 0.00 0.00 0.00 3.51
2962 2971 6.317893 TGATAGCACTGTTCGTTATCTAGTCA 59.682 38.462 0.00 0.00 0.00 3.41
2963 2972 6.726230 TGATAGCACTGTTCGTTATCTAGTC 58.274 40.000 0.00 0.00 0.00 2.59
2964 2973 6.694877 TGATAGCACTGTTCGTTATCTAGT 57.305 37.500 0.00 0.00 0.00 2.57
2965 2974 7.751348 GGTATGATAGCACTGTTCGTTATCTAG 59.249 40.741 0.00 0.00 0.00 2.43
2966 2975 7.447545 AGGTATGATAGCACTGTTCGTTATCTA 59.552 37.037 4.33 0.00 0.00 1.98
2967 2976 6.265649 AGGTATGATAGCACTGTTCGTTATCT 59.734 38.462 4.33 0.00 0.00 1.98
2968 2977 6.448006 AGGTATGATAGCACTGTTCGTTATC 58.552 40.000 4.33 0.00 0.00 1.75
2969 2978 6.406692 AGGTATGATAGCACTGTTCGTTAT 57.593 37.500 4.33 0.00 0.00 1.89
2970 2979 5.847111 AGGTATGATAGCACTGTTCGTTA 57.153 39.130 4.33 0.00 0.00 3.18
2971 2980 4.737855 AGGTATGATAGCACTGTTCGTT 57.262 40.909 4.33 0.00 0.00 3.85
2972 2981 5.360144 AGTTAGGTATGATAGCACTGTTCGT 59.640 40.000 4.33 0.00 0.00 3.85
2973 2982 5.833082 AGTTAGGTATGATAGCACTGTTCG 58.167 41.667 4.33 0.00 0.00 3.95
2974 2983 6.920758 CAGAGTTAGGTATGATAGCACTGTTC 59.079 42.308 4.33 0.00 0.00 3.18
2975 2984 6.684111 GCAGAGTTAGGTATGATAGCACTGTT 60.684 42.308 4.33 0.00 0.00 3.16
2976 2985 5.221342 GCAGAGTTAGGTATGATAGCACTGT 60.221 44.000 4.33 0.00 0.00 3.55
2977 2986 5.221322 TGCAGAGTTAGGTATGATAGCACTG 60.221 44.000 4.33 6.48 0.00 3.66
2978 2987 4.895889 TGCAGAGTTAGGTATGATAGCACT 59.104 41.667 4.33 0.00 0.00 4.40
2979 2988 5.010112 TCTGCAGAGTTAGGTATGATAGCAC 59.990 44.000 13.74 0.00 0.00 4.40
2980 2989 5.010112 GTCTGCAGAGTTAGGTATGATAGCA 59.990 44.000 18.89 0.00 0.00 3.49
2981 2990 5.010112 TGTCTGCAGAGTTAGGTATGATAGC 59.990 44.000 18.89 0.00 0.00 2.97
2982 2991 6.294453 CCTGTCTGCAGAGTTAGGTATGATAG 60.294 46.154 18.89 0.00 45.28 2.08
2983 2992 5.536538 CCTGTCTGCAGAGTTAGGTATGATA 59.463 44.000 18.89 0.00 45.28 2.15
2984 2993 4.343526 CCTGTCTGCAGAGTTAGGTATGAT 59.656 45.833 18.89 0.00 45.28 2.45
2985 2994 3.701542 CCTGTCTGCAGAGTTAGGTATGA 59.298 47.826 18.89 0.00 45.28 2.15
2986 2995 3.701542 TCCTGTCTGCAGAGTTAGGTATG 59.298 47.826 27.79 12.57 45.28 2.39
2987 2996 3.702045 GTCCTGTCTGCAGAGTTAGGTAT 59.298 47.826 27.79 0.00 45.28 2.73
2988 2997 3.090037 GTCCTGTCTGCAGAGTTAGGTA 58.910 50.000 27.79 17.98 45.28 3.08
2989 2998 1.896465 GTCCTGTCTGCAGAGTTAGGT 59.104 52.381 27.79 0.00 45.28 3.08
2990 2999 1.895798 TGTCCTGTCTGCAGAGTTAGG 59.104 52.381 25.26 25.26 45.28 2.69
2991 3000 3.583806 CTTGTCCTGTCTGCAGAGTTAG 58.416 50.000 18.89 15.28 45.28 2.34
2992 3001 2.300152 CCTTGTCCTGTCTGCAGAGTTA 59.700 50.000 18.89 5.85 45.28 2.24
2993 3002 1.071385 CCTTGTCCTGTCTGCAGAGTT 59.929 52.381 18.89 0.00 45.28 3.01
2994 3003 0.683973 CCTTGTCCTGTCTGCAGAGT 59.316 55.000 18.89 0.00 45.28 3.24
2995 3004 0.673022 GCCTTGTCCTGTCTGCAGAG 60.673 60.000 18.89 6.30 45.28 3.35
2996 3005 1.372683 GCCTTGTCCTGTCTGCAGA 59.627 57.895 13.74 13.74 45.28 4.26
2997 3006 2.031516 CGCCTTGTCCTGTCTGCAG 61.032 63.158 7.63 7.63 42.22 4.41
2998 3007 2.031012 CGCCTTGTCCTGTCTGCA 59.969 61.111 0.00 0.00 0.00 4.41
2999 3008 3.426568 GCGCCTTGTCCTGTCTGC 61.427 66.667 0.00 0.00 0.00 4.26
3000 3009 0.957395 AATGCGCCTTGTCCTGTCTG 60.957 55.000 4.18 0.00 0.00 3.51
3001 3010 0.613260 TAATGCGCCTTGTCCTGTCT 59.387 50.000 4.18 0.00 0.00 3.41
3002 3011 1.448985 TTAATGCGCCTTGTCCTGTC 58.551 50.000 4.18 0.00 0.00 3.51
3003 3012 1.904287 TTTAATGCGCCTTGTCCTGT 58.096 45.000 4.18 0.00 0.00 4.00
3004 3013 2.801063 CATTTAATGCGCCTTGTCCTG 58.199 47.619 4.18 0.00 0.00 3.86
3016 3025 4.201676 TGACACTAAGCGACGCATTTAATG 60.202 41.667 23.70 14.71 0.00 1.90
3017 3026 3.930229 TGACACTAAGCGACGCATTTAAT 59.070 39.130 23.70 2.72 0.00 1.40
3018 3027 3.122278 GTGACACTAAGCGACGCATTTAA 59.878 43.478 23.70 1.02 0.00 1.52
3019 3028 2.664568 GTGACACTAAGCGACGCATTTA 59.335 45.455 23.70 11.72 0.00 1.40
3020 3029 1.459592 GTGACACTAAGCGACGCATTT 59.540 47.619 23.70 11.13 0.00 2.32
3021 3030 1.068474 GTGACACTAAGCGACGCATT 58.932 50.000 23.70 15.14 0.00 3.56
3022 3031 0.038618 TGTGACACTAAGCGACGCAT 60.039 50.000 23.70 13.44 0.00 4.73
3023 3032 0.038618 ATGTGACACTAAGCGACGCA 60.039 50.000 23.70 0.28 0.00 5.24
3024 3033 0.640768 GATGTGACACTAAGCGACGC 59.359 55.000 13.03 13.03 0.00 5.19
3025 3034 0.907837 CGATGTGACACTAAGCGACG 59.092 55.000 7.20 0.00 0.00 5.12
3026 3035 1.978542 ACGATGTGACACTAAGCGAC 58.021 50.000 10.12 0.00 0.00 5.19
3027 3036 3.495193 GTTACGATGTGACACTAAGCGA 58.505 45.455 10.12 0.00 0.00 4.93
3028 3037 2.275510 CGTTACGATGTGACACTAAGCG 59.724 50.000 7.20 4.58 0.00 4.68
3029 3038 2.027688 GCGTTACGATGTGACACTAAGC 59.972 50.000 9.62 0.52 0.00 3.09
3030 3039 3.239254 TGCGTTACGATGTGACACTAAG 58.761 45.455 9.62 0.49 0.00 2.18
3031 3040 3.239254 CTGCGTTACGATGTGACACTAA 58.761 45.455 9.62 0.00 0.00 2.24
3032 3041 2.858839 CTGCGTTACGATGTGACACTA 58.141 47.619 9.62 0.00 0.00 2.74
3033 3042 1.698165 CTGCGTTACGATGTGACACT 58.302 50.000 9.62 0.00 0.00 3.55
3034 3043 0.093026 GCTGCGTTACGATGTGACAC 59.907 55.000 9.62 0.00 0.00 3.67
3035 3044 1.011968 GGCTGCGTTACGATGTGACA 61.012 55.000 9.62 0.00 0.00 3.58
3036 3045 1.693083 GGGCTGCGTTACGATGTGAC 61.693 60.000 9.62 0.00 0.00 3.67
3037 3046 1.447140 GGGCTGCGTTACGATGTGA 60.447 57.895 9.62 0.00 0.00 3.58
3038 3047 2.798501 CGGGCTGCGTTACGATGTG 61.799 63.158 9.62 0.00 0.00 3.21
3039 3048 2.508439 CGGGCTGCGTTACGATGT 60.508 61.111 9.62 0.00 0.00 3.06
3040 3049 2.202690 TCGGGCTGCGTTACGATG 60.203 61.111 9.62 0.58 0.00 3.84
3041 3050 2.202703 GTCGGGCTGCGTTACGAT 60.203 61.111 9.62 0.00 37.69 3.73
3042 3051 3.210223 TTGTCGGGCTGCGTTACGA 62.210 57.895 9.62 0.00 0.00 3.43
3043 3052 2.726691 CTTGTCGGGCTGCGTTACG 61.727 63.158 0.00 0.00 0.00 3.18
3044 3053 3.023591 GCTTGTCGGGCTGCGTTAC 62.024 63.158 0.00 0.00 0.00 2.50
3045 3054 2.740826 GCTTGTCGGGCTGCGTTA 60.741 61.111 0.00 0.00 0.00 3.18
3049 3058 3.741476 CAAGGCTTGTCGGGCTGC 61.741 66.667 19.07 0.00 41.94 5.25
3050 3059 3.741476 GCAAGGCTTGTCGGGCTG 61.741 66.667 26.71 1.46 41.94 4.85
3056 3065 3.056328 GACCCGGCAAGGCTTGTC 61.056 66.667 26.71 24.28 39.21 3.18
3059 3068 4.265056 AACGACCCGGCAAGGCTT 62.265 61.111 0.00 0.00 39.21 4.35
3060 3069 4.699522 GAACGACCCGGCAAGGCT 62.700 66.667 0.00 0.00 39.21 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.