Multiple sequence alignment - TraesCS2D01G196400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G196400 chr2D 100.000 2733 0 0 1 2733 143118931 143116199 0.000000e+00 5048.0
1 TraesCS2D01G196400 chr2D 78.167 371 60 12 1209 1561 142711481 142711114 1.650000e-52 217.0
2 TraesCS2D01G196400 chr2D 98.551 69 1 0 893 961 143118003 143117935 3.700000e-24 122.0
3 TraesCS2D01G196400 chr2D 98.551 69 1 0 929 997 143118039 143117971 3.700000e-24 122.0
4 TraesCS2D01G196400 chr2D 96.970 33 1 0 893 925 143117967 143117935 3.800000e-04 56.5
5 TraesCS2D01G196400 chr2D 96.970 33 1 0 965 997 143118039 143118007 3.800000e-04 56.5
6 TraesCS2D01G196400 chr2B 91.261 904 37 11 1071 1967 200690658 200689790 0.000000e+00 1194.0
7 TraesCS2D01G196400 chr2B 96.296 432 15 1 2302 2733 200682296 200681866 0.000000e+00 708.0
8 TraesCS2D01G196400 chr2B 95.361 194 8 1 2026 2218 200689796 200689603 9.510000e-80 307.0
9 TraesCS2D01G196400 chr2B 78.284 373 55 18 1210 1561 200643696 200643329 1.650000e-52 217.0
10 TraesCS2D01G196400 chr2B 100.000 77 0 0 2210 2286 200682360 200682284 2.840000e-30 143.0
11 TraesCS2D01G196400 chr2A 92.374 813 31 12 1133 1922 158176477 158177281 0.000000e+00 1129.0
12 TraesCS2D01G196400 chr2A 93.506 770 25 6 207 961 158175624 158176383 0.000000e+00 1122.0
13 TraesCS2D01G196400 chr2A 93.293 164 8 1 926 1086 158176309 158176472 3.520000e-59 239.0
14 TraesCS2D01G196400 chr2A 93.662 142 9 0 1 142 158175482 158175623 2.130000e-51 213.0
15 TraesCS2D01G196400 chr2A 77.855 289 45 8 1210 1481 158256195 158256481 7.830000e-36 161.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G196400 chr2D 143116199 143118931 2732 True 1081.00 5048 98.20840 1 2733 5 chr2D.!!$R2 2732
1 TraesCS2D01G196400 chr2B 200689603 200690658 1055 True 750.50 1194 93.31100 1071 2218 2 chr2B.!!$R3 1147
2 TraesCS2D01G196400 chr2A 158175482 158177281 1799 False 675.75 1129 93.20875 1 1922 4 chr2A.!!$F2 1921

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
194 195 0.037697 ACACACACACACACACGACT 60.038 50.0 0.0 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1967 2003 0.698818 CTGTAGGCTTTTCCCCCTGT 59.301 55.0 0.0 0.0 34.51 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
151 152 2.914695 GCAAGATGCTGGATCTCTCT 57.085 50.000 12.25 0.00 40.89 3.10
152 153 2.758009 GCAAGATGCTGGATCTCTCTC 58.242 52.381 12.25 0.00 40.89 3.20
153 154 2.366266 GCAAGATGCTGGATCTCTCTCT 59.634 50.000 12.25 0.00 40.89 3.10
154 155 3.553508 GCAAGATGCTGGATCTCTCTCTC 60.554 52.174 12.25 0.00 40.89 3.20
155 156 3.889859 AGATGCTGGATCTCTCTCTCT 57.110 47.619 5.79 0.00 36.63 3.10
156 157 3.759581 AGATGCTGGATCTCTCTCTCTC 58.240 50.000 5.79 0.00 36.63 3.20
157 158 3.396946 AGATGCTGGATCTCTCTCTCTCT 59.603 47.826 5.79 0.00 36.63 3.10
158 159 3.213206 TGCTGGATCTCTCTCTCTCTC 57.787 52.381 0.00 0.00 0.00 3.20
159 160 2.779430 TGCTGGATCTCTCTCTCTCTCT 59.221 50.000 0.00 0.00 0.00 3.10
160 161 3.181451 TGCTGGATCTCTCTCTCTCTCTC 60.181 52.174 0.00 0.00 0.00 3.20
161 162 3.072184 GCTGGATCTCTCTCTCTCTCTCT 59.928 52.174 0.00 0.00 0.00 3.10
162 163 4.802248 GCTGGATCTCTCTCTCTCTCTCTC 60.802 54.167 0.00 0.00 0.00 3.20
163 164 4.560739 TGGATCTCTCTCTCTCTCTCTCT 58.439 47.826 0.00 0.00 0.00 3.10
164 165 4.590647 TGGATCTCTCTCTCTCTCTCTCTC 59.409 50.000 0.00 0.00 0.00 3.20
165 166 4.837860 GGATCTCTCTCTCTCTCTCTCTCT 59.162 50.000 0.00 0.00 0.00 3.10
166 167 5.047377 GGATCTCTCTCTCTCTCTCTCTCTC 60.047 52.000 0.00 0.00 0.00 3.20
167 168 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
168 169 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
169 170 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
170 171 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
171 172 4.871822 TCTCTCTCTCTCTCTCTCTCTCA 58.128 47.826 0.00 0.00 0.00 3.27
172 173 4.646945 TCTCTCTCTCTCTCTCTCTCTCAC 59.353 50.000 0.00 0.00 0.00 3.51
173 174 4.352893 TCTCTCTCTCTCTCTCTCTCACA 58.647 47.826 0.00 0.00 0.00 3.58
174 175 4.160439 TCTCTCTCTCTCTCTCTCTCACAC 59.840 50.000 0.00 0.00 0.00 3.82
175 176 3.837731 TCTCTCTCTCTCTCTCTCACACA 59.162 47.826 0.00 0.00 0.00 3.72
176 177 3.935203 CTCTCTCTCTCTCTCTCACACAC 59.065 52.174 0.00 0.00 0.00 3.82
177 178 3.326297 TCTCTCTCTCTCTCTCACACACA 59.674 47.826 0.00 0.00 0.00 3.72
178 179 3.407698 TCTCTCTCTCTCTCACACACAC 58.592 50.000 0.00 0.00 0.00 3.82
179 180 3.145286 CTCTCTCTCTCTCACACACACA 58.855 50.000 0.00 0.00 0.00 3.72
180 181 2.881513 TCTCTCTCTCTCACACACACAC 59.118 50.000 0.00 0.00 0.00 3.82
181 182 2.620585 CTCTCTCTCTCACACACACACA 59.379 50.000 0.00 0.00 0.00 3.72
182 183 2.359214 TCTCTCTCTCACACACACACAC 59.641 50.000 0.00 0.00 0.00 3.82
183 184 2.099405 TCTCTCTCACACACACACACA 58.901 47.619 0.00 0.00 0.00 3.72
184 185 2.159240 TCTCTCTCACACACACACACAC 60.159 50.000 0.00 0.00 0.00 3.82
185 186 1.548269 TCTCTCACACACACACACACA 59.452 47.619 0.00 0.00 0.00 3.72
186 187 1.660607 CTCTCACACACACACACACAC 59.339 52.381 0.00 0.00 0.00 3.82
187 188 1.001406 TCTCACACACACACACACACA 59.999 47.619 0.00 0.00 0.00 3.72
188 189 1.128507 CTCACACACACACACACACAC 59.871 52.381 0.00 0.00 0.00 3.82
189 190 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
190 191 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
191 192 0.179227 CACACACACACACACACACG 60.179 55.000 0.00 0.00 0.00 4.49
192 193 0.319986 ACACACACACACACACACGA 60.320 50.000 0.00 0.00 0.00 4.35
193 194 0.094558 CACACACACACACACACGAC 59.905 55.000 0.00 0.00 0.00 4.34
194 195 0.037697 ACACACACACACACACGACT 60.038 50.000 0.00 0.00 0.00 4.18
195 196 0.369931 CACACACACACACACGACTG 59.630 55.000 0.00 0.00 0.00 3.51
196 197 1.348250 CACACACACACACGACTGC 59.652 57.895 0.00 0.00 0.00 4.40
197 198 1.083806 CACACACACACACGACTGCT 61.084 55.000 0.00 0.00 0.00 4.24
198 199 1.083806 ACACACACACACGACTGCTG 61.084 55.000 0.00 0.00 0.00 4.41
199 200 0.805711 CACACACACACGACTGCTGA 60.806 55.000 0.00 0.00 0.00 4.26
200 201 0.528466 ACACACACACGACTGCTGAG 60.528 55.000 0.00 0.00 0.00 3.35
201 202 1.068083 ACACACACGACTGCTGAGG 59.932 57.895 0.00 0.00 0.00 3.86
202 203 1.068083 CACACACGACTGCTGAGGT 59.932 57.895 0.00 0.00 0.00 3.85
203 204 1.068083 ACACACGACTGCTGAGGTG 59.932 57.895 13.84 13.84 36.50 4.00
204 205 1.363807 CACACGACTGCTGAGGTGA 59.636 57.895 19.37 0.00 34.59 4.02
205 206 0.249447 CACACGACTGCTGAGGTGAA 60.249 55.000 19.37 0.00 34.59 3.18
270 271 2.143925 GTGGTTGTAACTGCCTCTCAC 58.856 52.381 0.00 0.00 0.00 3.51
283 284 5.537674 ACTGCCTCTCACTGAAATGAAAATT 59.462 36.000 0.00 0.00 0.00 1.82
330 331 4.268359 AGAAAATGGGAGAGCAATCTGTC 58.732 43.478 0.00 0.00 32.27 3.51
340 341 3.327757 AGAGCAATCTGTCCACAGGTAAA 59.672 43.478 6.87 0.00 43.91 2.01
398 399 0.800012 GTACGCGATGCAGGGAAAAA 59.200 50.000 15.93 0.00 0.00 1.94
417 418 6.434340 GGAAAAACCATCACCAATCTTCTACT 59.566 38.462 0.00 0.00 38.79 2.57
441 448 1.009829 CTGATAGGCGTGGTGCTTTC 58.990 55.000 0.00 0.00 45.43 2.62
451 458 1.876156 GTGGTGCTTTCCAGAAGACAG 59.124 52.381 0.00 0.00 38.23 3.51
465 472 6.051717 CCAGAAGACAGAGGTTATAATGTGG 58.948 44.000 0.00 0.00 0.00 4.17
509 516 5.702622 TTCGATTCTCGCATTTACTCAAG 57.297 39.130 0.00 0.00 40.21 3.02
514 521 6.291849 CGATTCTCGCATTTACTCAAGTTAGG 60.292 42.308 0.00 0.00 31.14 2.69
543 550 6.320672 AGAAATCCAATAGTGGCTCATTTCAG 59.679 38.462 24.82 0.00 42.61 3.02
559 566 6.851609 TCATTTCAGATTCGTAATTTGGTGG 58.148 36.000 0.00 0.00 0.00 4.61
561 568 3.950397 TCAGATTCGTAATTTGGTGGCT 58.050 40.909 0.00 0.00 0.00 4.75
562 569 5.092554 TCAGATTCGTAATTTGGTGGCTA 57.907 39.130 0.00 0.00 0.00 3.93
563 570 5.680619 TCAGATTCGTAATTTGGTGGCTAT 58.319 37.500 0.00 0.00 0.00 2.97
564 571 6.822442 TCAGATTCGTAATTTGGTGGCTATA 58.178 36.000 0.00 0.00 0.00 1.31
572 579 8.758829 TCGTAATTTGGTGGCTATATATCTGAT 58.241 33.333 0.00 0.00 0.00 2.90
595 602 3.007635 GTTATTTTCCGGTCTCCTGGTG 58.992 50.000 0.00 0.00 0.00 4.17
634 641 0.327924 TGGCATGGACACCGAAGATT 59.672 50.000 0.00 0.00 0.00 2.40
648 655 6.080406 CACCGAAGATTTAGAGCAAGAAAAC 58.920 40.000 0.00 0.00 0.00 2.43
686 698 6.998074 AGATCAAAACAGAACAACACATCCTA 59.002 34.615 0.00 0.00 0.00 2.94
722 734 1.227497 GGAAGATGCCTCTCAGCCG 60.227 63.158 0.00 0.00 0.00 5.52
723 735 1.886777 GAAGATGCCTCTCAGCCGC 60.887 63.158 0.00 0.00 0.00 6.53
724 736 2.584261 GAAGATGCCTCTCAGCCGCA 62.584 60.000 0.00 0.00 36.84 5.69
728 740 0.682209 ATGCCTCTCAGCCGCAAAAT 60.682 50.000 0.00 0.00 35.85 1.82
729 741 1.138247 GCCTCTCAGCCGCAAAATG 59.862 57.895 0.00 0.00 0.00 2.32
811 824 2.260434 GCGCCTACGGTTCAGTCA 59.740 61.111 0.00 0.00 40.57 3.41
812 825 1.373748 GCGCCTACGGTTCAGTCAA 60.374 57.895 0.00 0.00 40.57 3.18
813 826 0.947180 GCGCCTACGGTTCAGTCAAA 60.947 55.000 0.00 0.00 40.57 2.69
814 827 0.788391 CGCCTACGGTTCAGTCAAAC 59.212 55.000 0.00 0.00 34.97 2.93
815 828 1.870580 CGCCTACGGTTCAGTCAAACA 60.871 52.381 0.00 0.00 34.97 2.83
816 829 2.215196 GCCTACGGTTCAGTCAAACAA 58.785 47.619 0.00 0.00 0.00 2.83
881 894 4.625742 GCTACTAAATGACGAAGACAGCAA 59.374 41.667 0.00 0.00 34.76 3.91
914 927 3.480470 CACACCTGAGTTGATCCAAGTT 58.520 45.455 0.00 0.00 0.00 2.66
931 944 4.067896 CAAGTTGAGCACACTTACTCCAT 58.932 43.478 0.00 0.00 31.65 3.41
932 945 5.237815 CAAGTTGAGCACACTTACTCCATA 58.762 41.667 0.00 0.00 31.65 2.74
933 946 4.822026 AGTTGAGCACACTTACTCCATAC 58.178 43.478 0.00 0.00 31.65 2.39
934 947 3.887621 TGAGCACACTTACTCCATACC 57.112 47.619 0.00 0.00 31.65 2.73
935 948 3.441101 TGAGCACACTTACTCCATACCT 58.559 45.455 0.00 0.00 31.65 3.08
936 949 3.195610 TGAGCACACTTACTCCATACCTG 59.804 47.826 0.00 0.00 31.65 4.00
937 950 3.441101 AGCACACTTACTCCATACCTGA 58.559 45.455 0.00 0.00 0.00 3.86
938 951 3.449018 AGCACACTTACTCCATACCTGAG 59.551 47.826 0.00 0.00 35.92 3.35
939 952 3.195825 GCACACTTACTCCATACCTGAGT 59.804 47.826 0.00 0.00 44.85 3.41
940 953 4.322801 GCACACTTACTCCATACCTGAGTT 60.323 45.833 0.00 0.00 42.78 3.01
941 954 5.171476 CACACTTACTCCATACCTGAGTTG 58.829 45.833 0.00 0.00 42.78 3.16
942 955 5.047306 CACACTTACTCCATACCTGAGTTGA 60.047 44.000 0.00 0.00 42.78 3.18
943 956 5.721960 ACACTTACTCCATACCTGAGTTGAT 59.278 40.000 0.00 0.00 42.78 2.57
944 957 6.127310 ACACTTACTCCATACCTGAGTTGATC 60.127 42.308 0.00 0.00 42.78 2.92
945 958 5.364157 ACTTACTCCATACCTGAGTTGATCC 59.636 44.000 0.00 0.00 42.78 3.36
946 959 3.724478 ACTCCATACCTGAGTTGATCCA 58.276 45.455 0.00 0.00 40.06 3.41
947 960 4.104086 ACTCCATACCTGAGTTGATCCAA 58.896 43.478 0.00 0.00 40.06 3.53
948 961 4.163078 ACTCCATACCTGAGTTGATCCAAG 59.837 45.833 0.00 0.00 40.06 3.61
949 962 4.104086 TCCATACCTGAGTTGATCCAAGT 58.896 43.478 0.00 0.00 0.00 3.16
950 963 4.536090 TCCATACCTGAGTTGATCCAAGTT 59.464 41.667 0.00 0.00 0.00 2.66
951 964 4.637534 CCATACCTGAGTTGATCCAAGTTG 59.362 45.833 0.00 0.00 0.00 3.16
952 965 5.491070 CATACCTGAGTTGATCCAAGTTGA 58.509 41.667 3.87 0.00 0.00 3.18
953 966 4.013267 ACCTGAGTTGATCCAAGTTGAG 57.987 45.455 3.87 0.00 0.00 3.02
954 967 2.746362 CCTGAGTTGATCCAAGTTGAGC 59.254 50.000 3.87 0.00 0.00 4.26
955 968 3.405831 CTGAGTTGATCCAAGTTGAGCA 58.594 45.455 3.87 0.00 0.00 4.26
956 969 3.141398 TGAGTTGATCCAAGTTGAGCAC 58.859 45.455 3.87 0.00 28.88 4.40
957 970 3.141398 GAGTTGATCCAAGTTGAGCACA 58.859 45.455 3.87 0.00 28.88 4.57
958 971 2.880890 AGTTGATCCAAGTTGAGCACAC 59.119 45.455 3.87 0.00 28.88 3.82
959 972 2.880890 GTTGATCCAAGTTGAGCACACT 59.119 45.455 3.87 0.00 28.88 3.55
960 973 3.213206 TGATCCAAGTTGAGCACACTT 57.787 42.857 3.87 0.00 0.00 3.16
961 974 4.350368 TGATCCAAGTTGAGCACACTTA 57.650 40.909 3.87 0.00 0.00 2.24
962 975 4.065088 TGATCCAAGTTGAGCACACTTAC 58.935 43.478 3.87 0.00 0.00 2.34
963 976 3.838244 TCCAAGTTGAGCACACTTACT 57.162 42.857 3.87 0.00 0.00 2.24
966 979 3.466836 CAAGTTGAGCACACTTACTCCA 58.533 45.455 0.00 0.00 31.65 3.86
971 984 3.441101 TGAGCACACTTACTCCATACCT 58.559 45.455 0.00 0.00 31.65 3.08
1017 1030 1.667236 CAATGGCGCTAACCAGATCA 58.333 50.000 7.64 0.00 44.71 2.92
1081 1094 1.744368 CGACGACCGGAAGAGAGGA 60.744 63.158 9.46 0.00 33.91 3.71
1090 1103 1.216710 GAAGAGAGGACACAGGCGG 59.783 63.158 0.00 0.00 0.00 6.13
1117 1130 0.882042 GCCATCAGTGCCATACCTCG 60.882 60.000 0.00 0.00 0.00 4.63
1118 1131 0.882042 CCATCAGTGCCATACCTCGC 60.882 60.000 0.00 0.00 0.00 5.03
1119 1132 0.882042 CATCAGTGCCATACCTCGCC 60.882 60.000 0.00 0.00 0.00 5.54
1120 1133 2.369257 ATCAGTGCCATACCTCGCCG 62.369 60.000 0.00 0.00 0.00 6.46
1121 1134 3.849951 AGTGCCATACCTCGCCGG 61.850 66.667 0.00 0.00 39.35 6.13
1122 1135 3.845259 GTGCCATACCTCGCCGGA 61.845 66.667 5.05 0.00 36.31 5.14
1123 1136 3.536917 TGCCATACCTCGCCGGAG 61.537 66.667 5.05 0.00 40.14 4.63
1144 1157 1.639298 CCAAGAAGCCGAAGCCGAAG 61.639 60.000 0.00 0.00 41.25 3.79
1178 1191 4.473520 CTCGCCGGCCTCACCAAT 62.474 66.667 23.46 0.00 39.03 3.16
1184 1203 2.668632 GGCCTCACCAATCACCGA 59.331 61.111 0.00 0.00 38.86 4.69
1189 1208 1.071019 CTCACCAATCACCGACGTCG 61.071 60.000 30.33 30.33 39.44 5.12
1190 1209 1.081041 CACCAATCACCGACGTCGA 60.081 57.895 37.65 19.79 43.02 4.20
1329 1360 1.447140 GCTCGGGCGTGTGATAACA 60.447 57.895 0.00 0.00 0.00 2.41
1335 1366 1.648165 GCGTGTGATAACATGCGCG 60.648 57.895 11.72 0.00 41.88 6.86
1361 1392 3.058160 CACCGACTCCGTACCCGT 61.058 66.667 0.00 0.00 0.00 5.28
1574 1605 4.036734 TGAGTTTGAAACATCCTTGTCTGC 59.963 41.667 11.02 0.00 34.06 4.26
1592 1623 9.871238 CTTGTCTGCTTTACTCCTTTATTACTA 57.129 33.333 0.00 0.00 0.00 1.82
1756 1787 1.172180 TTGGCGTGCTCTGGAAAAGG 61.172 55.000 0.00 0.00 0.00 3.11
1918 1954 0.402504 TGACGGGTTGGCCTTGTATT 59.597 50.000 3.32 0.00 34.45 1.89
1960 1996 1.601903 CGCTACCAAAACAGCAGAACA 59.398 47.619 0.00 0.00 37.66 3.18
1961 1997 2.032799 CGCTACCAAAACAGCAGAACAA 59.967 45.455 0.00 0.00 37.66 2.83
1962 1998 3.488384 CGCTACCAAAACAGCAGAACAAA 60.488 43.478 0.00 0.00 37.66 2.83
1963 1999 4.429108 GCTACCAAAACAGCAGAACAAAA 58.571 39.130 0.00 0.00 37.73 2.44
1964 2000 4.867608 GCTACCAAAACAGCAGAACAAAAA 59.132 37.500 0.00 0.00 37.73 1.94
1965 2001 5.220397 GCTACCAAAACAGCAGAACAAAAAC 60.220 40.000 0.00 0.00 37.73 2.43
1966 2002 4.893608 ACCAAAACAGCAGAACAAAAACT 58.106 34.783 0.00 0.00 0.00 2.66
1967 2003 6.031751 ACCAAAACAGCAGAACAAAAACTA 57.968 33.333 0.00 0.00 0.00 2.24
1968 2004 5.867174 ACCAAAACAGCAGAACAAAAACTAC 59.133 36.000 0.00 0.00 0.00 2.73
1969 2005 5.866633 CCAAAACAGCAGAACAAAAACTACA 59.133 36.000 0.00 0.00 0.00 2.74
1970 2006 6.034898 CCAAAACAGCAGAACAAAAACTACAG 59.965 38.462 0.00 0.00 0.00 2.74
1971 2007 4.900635 ACAGCAGAACAAAAACTACAGG 57.099 40.909 0.00 0.00 0.00 4.00
1972 2008 3.632145 ACAGCAGAACAAAAACTACAGGG 59.368 43.478 0.00 0.00 0.00 4.45
1973 2009 3.004734 CAGCAGAACAAAAACTACAGGGG 59.995 47.826 0.00 0.00 0.00 4.79
1974 2010 2.296190 GCAGAACAAAAACTACAGGGGG 59.704 50.000 0.00 0.00 0.00 5.40
1975 2011 3.827722 CAGAACAAAAACTACAGGGGGA 58.172 45.455 0.00 0.00 0.00 4.81
1976 2012 4.211920 CAGAACAAAAACTACAGGGGGAA 58.788 43.478 0.00 0.00 0.00 3.97
1977 2013 4.647399 CAGAACAAAAACTACAGGGGGAAA 59.353 41.667 0.00 0.00 0.00 3.13
1978 2014 5.128008 CAGAACAAAAACTACAGGGGGAAAA 59.872 40.000 0.00 0.00 0.00 2.29
1979 2015 5.362717 AGAACAAAAACTACAGGGGGAAAAG 59.637 40.000 0.00 0.00 0.00 2.27
1980 2016 3.386726 ACAAAAACTACAGGGGGAAAAGC 59.613 43.478 0.00 0.00 0.00 3.51
1981 2017 2.304221 AAACTACAGGGGGAAAAGCC 57.696 50.000 0.00 0.00 0.00 4.35
1982 2018 1.456919 AACTACAGGGGGAAAAGCCT 58.543 50.000 0.00 0.00 36.66 4.58
1983 2019 2.354261 ACTACAGGGGGAAAAGCCTA 57.646 50.000 0.00 0.00 36.66 3.93
1984 2020 1.914108 ACTACAGGGGGAAAAGCCTAC 59.086 52.381 0.00 0.00 36.66 3.18
1985 2021 1.913419 CTACAGGGGGAAAAGCCTACA 59.087 52.381 0.00 0.00 36.66 2.74
1986 2022 0.698818 ACAGGGGGAAAAGCCTACAG 59.301 55.000 0.00 0.00 36.66 2.74
1987 2023 0.991920 CAGGGGGAAAAGCCTACAGA 59.008 55.000 0.00 0.00 36.66 3.41
1988 2024 0.992695 AGGGGGAAAAGCCTACAGAC 59.007 55.000 0.00 0.00 36.66 3.51
1989 2025 0.992695 GGGGGAAAAGCCTACAGACT 59.007 55.000 0.00 0.00 36.66 3.24
1990 2026 1.065345 GGGGGAAAAGCCTACAGACTC 60.065 57.143 0.00 0.00 36.66 3.36
1991 2027 1.628846 GGGGAAAAGCCTACAGACTCA 59.371 52.381 0.00 0.00 36.66 3.41
1992 2028 2.039879 GGGGAAAAGCCTACAGACTCAA 59.960 50.000 0.00 0.00 36.66 3.02
1993 2029 3.075148 GGGAAAAGCCTACAGACTCAAC 58.925 50.000 0.00 0.00 36.66 3.18
1994 2030 3.496160 GGGAAAAGCCTACAGACTCAACA 60.496 47.826 0.00 0.00 36.66 3.33
1995 2031 4.134563 GGAAAAGCCTACAGACTCAACAA 58.865 43.478 0.00 0.00 0.00 2.83
1996 2032 4.023963 GGAAAAGCCTACAGACTCAACAAC 60.024 45.833 0.00 0.00 0.00 3.32
1997 2033 4.423625 AAAGCCTACAGACTCAACAACT 57.576 40.909 0.00 0.00 0.00 3.16
1998 2034 3.393089 AGCCTACAGACTCAACAACTG 57.607 47.619 0.00 0.00 37.62 3.16
1999 2035 2.965831 AGCCTACAGACTCAACAACTGA 59.034 45.455 0.00 0.00 35.85 3.41
2018 2054 4.808414 TGAGTCCTCAGAACACCTTATG 57.192 45.455 0.00 0.00 34.14 1.90
2019 2055 3.055819 TGAGTCCTCAGAACACCTTATGC 60.056 47.826 0.00 0.00 34.14 3.14
2020 2056 2.093973 AGTCCTCAGAACACCTTATGCG 60.094 50.000 0.00 0.00 0.00 4.73
2021 2057 1.009829 CCTCAGAACACCTTATGCGC 58.990 55.000 0.00 0.00 0.00 6.09
2022 2058 1.675714 CCTCAGAACACCTTATGCGCA 60.676 52.381 14.96 14.96 0.00 6.09
2023 2059 2.076100 CTCAGAACACCTTATGCGCAA 58.924 47.619 17.11 0.00 0.00 4.85
2024 2060 2.483877 CTCAGAACACCTTATGCGCAAA 59.516 45.455 17.11 9.55 0.00 3.68
2049 2085 5.888982 AAAAAGAGTCCTCAGAACACCTA 57.111 39.130 0.00 0.00 0.00 3.08
2063 2099 3.646736 ACACCTAAACTAATGGGGCTC 57.353 47.619 0.00 0.00 0.00 4.70
2095 2132 0.174845 TGGACATGCGCTAGTACCAC 59.825 55.000 9.73 0.00 0.00 4.16
2102 2139 2.650163 CGCTAGTACCACGCTGAAC 58.350 57.895 0.00 0.00 0.00 3.18
2218 2255 8.977412 TCAAAAACATAAAACCTCTCCTTCTTT 58.023 29.630 0.00 0.00 0.00 2.52
2219 2256 9.034544 CAAAAACATAAAACCTCTCCTTCTTTG 57.965 33.333 0.00 0.00 0.00 2.77
2220 2257 5.966742 ACATAAAACCTCTCCTTCTTTGC 57.033 39.130 0.00 0.00 0.00 3.68
2221 2258 4.767409 ACATAAAACCTCTCCTTCTTTGCC 59.233 41.667 0.00 0.00 0.00 4.52
2222 2259 3.602205 AAAACCTCTCCTTCTTTGCCT 57.398 42.857 0.00 0.00 0.00 4.75
2223 2260 2.869101 AACCTCTCCTTCTTTGCCTC 57.131 50.000 0.00 0.00 0.00 4.70
2224 2261 2.037385 ACCTCTCCTTCTTTGCCTCT 57.963 50.000 0.00 0.00 0.00 3.69
2225 2262 1.627834 ACCTCTCCTTCTTTGCCTCTG 59.372 52.381 0.00 0.00 0.00 3.35
2226 2263 1.905215 CCTCTCCTTCTTTGCCTCTGA 59.095 52.381 0.00 0.00 0.00 3.27
2227 2264 2.304180 CCTCTCCTTCTTTGCCTCTGAA 59.696 50.000 0.00 0.00 0.00 3.02
2228 2265 3.333804 CTCTCCTTCTTTGCCTCTGAAC 58.666 50.000 0.00 0.00 0.00 3.18
2229 2266 2.705658 TCTCCTTCTTTGCCTCTGAACA 59.294 45.455 0.00 0.00 0.00 3.18
2230 2267 2.810852 CTCCTTCTTTGCCTCTGAACAC 59.189 50.000 0.00 0.00 0.00 3.32
2231 2268 2.172505 TCCTTCTTTGCCTCTGAACACA 59.827 45.455 0.00 0.00 0.00 3.72
2232 2269 2.951642 CCTTCTTTGCCTCTGAACACAA 59.048 45.455 0.00 0.00 0.00 3.33
2233 2270 3.571401 CCTTCTTTGCCTCTGAACACAAT 59.429 43.478 0.00 0.00 0.00 2.71
2234 2271 4.761739 CCTTCTTTGCCTCTGAACACAATA 59.238 41.667 0.00 0.00 0.00 1.90
2235 2272 5.335191 CCTTCTTTGCCTCTGAACACAATAC 60.335 44.000 0.00 0.00 0.00 1.89
2236 2273 4.973168 TCTTTGCCTCTGAACACAATACT 58.027 39.130 0.00 0.00 0.00 2.12
2237 2274 4.756642 TCTTTGCCTCTGAACACAATACTG 59.243 41.667 0.00 0.00 0.00 2.74
2238 2275 3.769739 TGCCTCTGAACACAATACTGT 57.230 42.857 0.00 0.00 35.63 3.55
2239 2276 4.882842 TGCCTCTGAACACAATACTGTA 57.117 40.909 0.00 0.00 33.22 2.74
2240 2277 4.820897 TGCCTCTGAACACAATACTGTAG 58.179 43.478 0.00 0.00 33.22 2.74
2241 2278 4.283467 TGCCTCTGAACACAATACTGTAGT 59.717 41.667 0.00 0.00 33.22 2.73
2242 2279 5.479027 TGCCTCTGAACACAATACTGTAGTA 59.521 40.000 0.00 0.00 33.22 1.82
2243 2280 6.014925 TGCCTCTGAACACAATACTGTAGTAA 60.015 38.462 0.00 0.00 33.22 2.24
2244 2281 6.531948 GCCTCTGAACACAATACTGTAGTAAG 59.468 42.308 0.00 0.00 33.22 2.34
2245 2282 7.577046 GCCTCTGAACACAATACTGTAGTAAGA 60.577 40.741 0.00 0.00 33.22 2.10
2246 2283 8.304596 CCTCTGAACACAATACTGTAGTAAGAA 58.695 37.037 0.00 0.00 33.22 2.52
2247 2284 9.347934 CTCTGAACACAATACTGTAGTAAGAAG 57.652 37.037 0.00 0.00 33.22 2.85
2248 2285 8.304596 TCTGAACACAATACTGTAGTAAGAAGG 58.695 37.037 0.00 0.00 33.22 3.46
2249 2286 8.185506 TGAACACAATACTGTAGTAAGAAGGA 57.814 34.615 0.00 0.00 33.22 3.36
2250 2287 8.644216 TGAACACAATACTGTAGTAAGAAGGAA 58.356 33.333 0.00 0.00 33.22 3.36
2251 2288 8.828688 AACACAATACTGTAGTAAGAAGGAAC 57.171 34.615 0.00 0.00 33.22 3.62
2252 2289 7.959175 ACACAATACTGTAGTAAGAAGGAACA 58.041 34.615 0.00 0.00 33.22 3.18
2253 2290 8.426489 ACACAATACTGTAGTAAGAAGGAACAA 58.574 33.333 0.00 0.00 33.22 2.83
2254 2291 9.436957 CACAATACTGTAGTAAGAAGGAACAAT 57.563 33.333 0.00 0.00 33.22 2.71
2289 2326 8.502105 ACAGTGTAATTACATTAAAGCTACCC 57.498 34.615 20.72 4.25 38.63 3.69
2290 2327 7.555195 ACAGTGTAATTACATTAAAGCTACCCC 59.445 37.037 20.72 4.07 38.63 4.95
2291 2328 6.764560 AGTGTAATTACATTAAAGCTACCCCG 59.235 38.462 20.72 0.00 38.63 5.73
2292 2329 5.528320 TGTAATTACATTAAAGCTACCCCGC 59.472 40.000 14.35 0.00 0.00 6.13
2293 2330 3.630892 TTACATTAAAGCTACCCCGCA 57.369 42.857 0.00 0.00 0.00 5.69
2294 2331 2.500392 ACATTAAAGCTACCCCGCAA 57.500 45.000 0.00 0.00 0.00 4.85
2295 2332 2.797786 ACATTAAAGCTACCCCGCAAA 58.202 42.857 0.00 0.00 0.00 3.68
2296 2333 3.158676 ACATTAAAGCTACCCCGCAAAA 58.841 40.909 0.00 0.00 0.00 2.44
2297 2334 3.574826 ACATTAAAGCTACCCCGCAAAAA 59.425 39.130 0.00 0.00 0.00 1.94
2326 2363 8.840833 TTACATTAAAGCTGTGATTACACTGA 57.159 30.769 10.45 0.00 46.07 3.41
2327 2364 7.744087 ACATTAAAGCTGTGATTACACTGAA 57.256 32.000 10.45 0.00 46.07 3.02
2328 2365 8.165239 ACATTAAAGCTGTGATTACACTGAAA 57.835 30.769 10.45 1.49 46.07 2.69
2329 2366 8.629158 ACATTAAAGCTGTGATTACACTGAAAA 58.371 29.630 10.45 1.22 46.07 2.29
2330 2367 9.630098 CATTAAAGCTGTGATTACACTGAAAAT 57.370 29.630 10.45 2.96 46.07 1.82
2334 2371 9.846248 AAAGCTGTGATTACACTGAAAATTATC 57.154 29.630 10.45 0.00 46.07 1.75
2335 2372 8.565896 AGCTGTGATTACACTGAAAATTATCA 57.434 30.769 10.45 0.00 46.07 2.15
2359 2396 8.714179 TCAGTGTAATTACATTAGAAAACACCG 58.286 33.333 20.72 0.23 38.63 4.94
2360 2397 8.500773 CAGTGTAATTACATTAGAAAACACCGT 58.499 33.333 20.72 0.00 38.63 4.83
2361 2398 8.500773 AGTGTAATTACATTAGAAAACACCGTG 58.499 33.333 20.72 0.00 38.63 4.94
2362 2399 8.497554 GTGTAATTACATTAGAAAACACCGTGA 58.502 33.333 20.72 0.00 38.63 4.35
2363 2400 9.221933 TGTAATTACATTAGAAAACACCGTGAT 57.778 29.630 14.35 0.00 0.00 3.06
2367 2404 8.604640 TTACATTAGAAAACACCGTGATTACA 57.395 30.769 5.28 0.00 0.00 2.41
2368 2405 6.894828 ACATTAGAAAACACCGTGATTACAC 58.105 36.000 5.28 0.00 42.88 2.90
2369 2406 6.708949 ACATTAGAAAACACCGTGATTACACT 59.291 34.615 5.28 3.81 43.99 3.55
2370 2407 7.874016 ACATTAGAAAACACCGTGATTACACTA 59.126 33.333 5.28 2.94 43.99 2.74
2371 2408 8.879759 CATTAGAAAACACCGTGATTACACTAT 58.120 33.333 5.28 0.00 43.99 2.12
2373 2410 9.926158 TTAGAAAACACCGTGATTACACTATAA 57.074 29.630 5.28 0.00 43.99 0.98
2375 2412 9.444600 AGAAAACACCGTGATTACACTATAATT 57.555 29.630 5.28 0.00 43.99 1.40
2376 2413 9.698617 GAAAACACCGTGATTACACTATAATTC 57.301 33.333 5.28 0.00 43.99 2.17
2377 2414 8.780846 AAACACCGTGATTACACTATAATTCA 57.219 30.769 5.28 0.00 43.99 2.57
2378 2415 7.766219 ACACCGTGATTACACTATAATTCAC 57.234 36.000 5.28 0.00 43.99 3.18
2379 2416 7.324935 ACACCGTGATTACACTATAATTCACA 58.675 34.615 5.28 0.00 43.99 3.58
2380 2417 7.820386 ACACCGTGATTACACTATAATTCACAA 59.180 33.333 5.28 0.00 43.99 3.33
2381 2418 8.661257 CACCGTGATTACACTATAATTCACAAA 58.339 33.333 0.00 0.00 43.99 2.83
2382 2419 9.391006 ACCGTGATTACACTATAATTCACAAAT 57.609 29.630 0.00 0.00 43.99 2.32
2383 2420 9.650371 CCGTGATTACACTATAATTCACAAATG 57.350 33.333 0.00 0.00 43.99 2.32
2428 2465 8.215899 GTGTAATCACTGTTCAATTTTACTGC 57.784 34.615 0.00 0.00 40.98 4.40
2429 2466 7.860373 GTGTAATCACTGTTCAATTTTACTGCA 59.140 33.333 0.00 0.00 40.98 4.41
2430 2467 8.575589 TGTAATCACTGTTCAATTTTACTGCAT 58.424 29.630 0.00 0.00 0.00 3.96
2435 2472 8.673711 TCACTGTTCAATTTTACTGCATATACC 58.326 33.333 0.00 0.00 0.00 2.73
2436 2473 7.915397 CACTGTTCAATTTTACTGCATATACCC 59.085 37.037 0.00 0.00 0.00 3.69
2437 2474 7.834181 ACTGTTCAATTTTACTGCATATACCCT 59.166 33.333 0.00 0.00 0.00 4.34
2438 2475 9.337396 CTGTTCAATTTTACTGCATATACCCTA 57.663 33.333 0.00 0.00 0.00 3.53
2439 2476 9.860650 TGTTCAATTTTACTGCATATACCCTAT 57.139 29.630 0.00 0.00 0.00 2.57
2487 2524 7.938563 TTTTTACAAATGTCAAAGAATCCCG 57.061 32.000 0.00 0.00 0.00 5.14
2488 2525 3.575965 ACAAATGTCAAAGAATCCCGC 57.424 42.857 0.00 0.00 0.00 6.13
2489 2526 3.157087 ACAAATGTCAAAGAATCCCGCT 58.843 40.909 0.00 0.00 0.00 5.52
2490 2527 4.331968 ACAAATGTCAAAGAATCCCGCTA 58.668 39.130 0.00 0.00 0.00 4.26
2491 2528 4.764823 ACAAATGTCAAAGAATCCCGCTAA 59.235 37.500 0.00 0.00 0.00 3.09
2492 2529 5.418840 ACAAATGTCAAAGAATCCCGCTAAT 59.581 36.000 0.00 0.00 0.00 1.73
2493 2530 6.071391 ACAAATGTCAAAGAATCCCGCTAATT 60.071 34.615 0.00 0.00 0.00 1.40
2494 2531 7.122055 ACAAATGTCAAAGAATCCCGCTAATTA 59.878 33.333 0.00 0.00 0.00 1.40
2495 2532 6.619801 ATGTCAAAGAATCCCGCTAATTAC 57.380 37.500 0.00 0.00 0.00 1.89
2496 2533 5.492895 TGTCAAAGAATCCCGCTAATTACA 58.507 37.500 0.00 0.00 0.00 2.41
2497 2534 5.353123 TGTCAAAGAATCCCGCTAATTACAC 59.647 40.000 0.00 0.00 0.00 2.90
2498 2535 5.585047 GTCAAAGAATCCCGCTAATTACACT 59.415 40.000 0.00 0.00 0.00 3.55
2499 2536 5.584649 TCAAAGAATCCCGCTAATTACACTG 59.415 40.000 0.00 0.00 0.00 3.66
2500 2537 4.755266 AGAATCCCGCTAATTACACTGT 57.245 40.909 0.00 0.00 0.00 3.55
2501 2538 5.099042 AGAATCCCGCTAATTACACTGTT 57.901 39.130 0.00 0.00 0.00 3.16
2502 2539 5.497474 AGAATCCCGCTAATTACACTGTTT 58.503 37.500 0.00 0.00 0.00 2.83
2503 2540 6.646267 AGAATCCCGCTAATTACACTGTTTA 58.354 36.000 0.00 0.00 0.00 2.01
2504 2541 7.107542 AGAATCCCGCTAATTACACTGTTTAA 58.892 34.615 0.00 0.00 0.00 1.52
2505 2542 6.673154 ATCCCGCTAATTACACTGTTTAAC 57.327 37.500 0.00 0.00 0.00 2.01
2506 2543 4.937015 TCCCGCTAATTACACTGTTTAACC 59.063 41.667 0.00 0.00 0.00 2.85
2507 2544 4.095334 CCCGCTAATTACACTGTTTAACCC 59.905 45.833 0.00 0.00 0.00 4.11
2508 2545 4.939439 CCGCTAATTACACTGTTTAACCCT 59.061 41.667 0.00 0.00 0.00 4.34
2509 2546 5.413523 CCGCTAATTACACTGTTTAACCCTT 59.586 40.000 0.00 0.00 0.00 3.95
2510 2547 6.594937 CCGCTAATTACACTGTTTAACCCTTA 59.405 38.462 0.00 0.00 0.00 2.69
2511 2548 7.413328 CCGCTAATTACACTGTTTAACCCTTAC 60.413 40.741 0.00 0.00 0.00 2.34
2512 2549 7.118101 CGCTAATTACACTGTTTAACCCTTACA 59.882 37.037 0.00 0.00 0.00 2.41
2513 2550 8.953313 GCTAATTACACTGTTTAACCCTTACAT 58.047 33.333 0.00 0.00 0.00 2.29
2516 2553 8.700439 ATTACACTGTTTAACCCTTACATTGT 57.300 30.769 0.00 0.00 38.61 2.71
2517 2554 9.796180 ATTACACTGTTTAACCCTTACATTGTA 57.204 29.630 0.00 0.00 37.08 2.41
2518 2555 9.624373 TTACACTGTTTAACCCTTACATTGTAA 57.376 29.630 12.50 12.50 41.47 2.41
2519 2556 8.522542 ACACTGTTTAACCCTTACATTGTAAA 57.477 30.769 10.32 0.00 34.99 2.01
2520 2557 8.968969 ACACTGTTTAACCCTTACATTGTAAAA 58.031 29.630 10.32 0.00 34.99 1.52
2521 2558 9.974980 CACTGTTTAACCCTTACATTGTAAAAT 57.025 29.630 10.32 0.93 0.00 1.82
2527 2564 7.784470 AACCCTTACATTGTAAAATTAGGCA 57.216 32.000 10.32 0.00 0.00 4.75
2528 2565 7.784470 ACCCTTACATTGTAAAATTAGGCAA 57.216 32.000 10.32 0.00 0.00 4.52
2529 2566 8.374184 ACCCTTACATTGTAAAATTAGGCAAT 57.626 30.769 10.32 0.00 32.48 3.56
2530 2567 8.821817 ACCCTTACATTGTAAAATTAGGCAATT 58.178 29.630 10.32 0.00 35.84 2.32
2543 2580 9.995003 AAAATTAGGCAATTACAATCTTGTTCA 57.005 25.926 0.20 0.00 42.35 3.18
2544 2581 8.986477 AATTAGGCAATTACAATCTTGTTCAC 57.014 30.769 0.20 0.00 42.35 3.18
2545 2582 7.517614 TTAGGCAATTACAATCTTGTTCACA 57.482 32.000 0.20 0.00 42.35 3.58
2546 2583 6.017400 AGGCAATTACAATCTTGTTCACAG 57.983 37.500 0.20 0.00 42.35 3.66
2547 2584 5.769662 AGGCAATTACAATCTTGTTCACAGA 59.230 36.000 0.20 0.00 42.35 3.41
2548 2585 6.072286 AGGCAATTACAATCTTGTTCACAGAG 60.072 38.462 0.20 0.00 42.35 3.35
2549 2586 6.072508 GGCAATTACAATCTTGTTCACAGAGA 60.073 38.462 0.20 0.00 42.35 3.10
2550 2587 7.020010 GCAATTACAATCTTGTTCACAGAGAG 58.980 38.462 0.20 0.00 42.35 3.20
2551 2588 7.308229 GCAATTACAATCTTGTTCACAGAGAGT 60.308 37.037 0.20 0.00 42.35 3.24
2552 2589 8.562892 CAATTACAATCTTGTTCACAGAGAGTT 58.437 33.333 0.20 0.00 42.35 3.01
2553 2590 7.715265 TTACAATCTTGTTCACAGAGAGTTC 57.285 36.000 0.20 0.00 42.35 3.01
2554 2591 5.059833 ACAATCTTGTTCACAGAGAGTTCC 58.940 41.667 0.00 0.00 38.47 3.62
2555 2592 4.963318 ATCTTGTTCACAGAGAGTTCCA 57.037 40.909 0.00 0.00 0.00 3.53
2556 2593 4.327982 TCTTGTTCACAGAGAGTTCCAG 57.672 45.455 0.00 0.00 0.00 3.86
2557 2594 2.533266 TGTTCACAGAGAGTTCCAGC 57.467 50.000 0.00 0.00 0.00 4.85
2558 2595 1.070758 TGTTCACAGAGAGTTCCAGCC 59.929 52.381 0.00 0.00 0.00 4.85
2559 2596 1.070758 GTTCACAGAGAGTTCCAGCCA 59.929 52.381 0.00 0.00 0.00 4.75
2560 2597 1.649321 TCACAGAGAGTTCCAGCCAT 58.351 50.000 0.00 0.00 0.00 4.40
2561 2598 2.820178 TCACAGAGAGTTCCAGCCATA 58.180 47.619 0.00 0.00 0.00 2.74
2562 2599 3.173151 TCACAGAGAGTTCCAGCCATAA 58.827 45.455 0.00 0.00 0.00 1.90
2563 2600 3.582647 TCACAGAGAGTTCCAGCCATAAA 59.417 43.478 0.00 0.00 0.00 1.40
2564 2601 4.041567 TCACAGAGAGTTCCAGCCATAAAA 59.958 41.667 0.00 0.00 0.00 1.52
2565 2602 4.154918 CACAGAGAGTTCCAGCCATAAAAC 59.845 45.833 0.00 0.00 0.00 2.43
2566 2603 4.202461 ACAGAGAGTTCCAGCCATAAAACA 60.202 41.667 0.00 0.00 0.00 2.83
2567 2604 4.154918 CAGAGAGTTCCAGCCATAAAACAC 59.845 45.833 0.00 0.00 0.00 3.32
2568 2605 4.072131 GAGAGTTCCAGCCATAAAACACA 58.928 43.478 0.00 0.00 0.00 3.72
2569 2606 4.074970 AGAGTTCCAGCCATAAAACACAG 58.925 43.478 0.00 0.00 0.00 3.66
2570 2607 3.821033 GAGTTCCAGCCATAAAACACAGT 59.179 43.478 0.00 0.00 0.00 3.55
2571 2608 4.980573 AGTTCCAGCCATAAAACACAGTA 58.019 39.130 0.00 0.00 0.00 2.74
2572 2609 5.381757 AGTTCCAGCCATAAAACACAGTAA 58.618 37.500 0.00 0.00 0.00 2.24
2573 2610 5.830991 AGTTCCAGCCATAAAACACAGTAAA 59.169 36.000 0.00 0.00 0.00 2.01
2574 2611 6.493458 AGTTCCAGCCATAAAACACAGTAAAT 59.507 34.615 0.00 0.00 0.00 1.40
2575 2612 6.909550 TCCAGCCATAAAACACAGTAAATT 57.090 33.333 0.00 0.00 0.00 1.82
2576 2613 6.686630 TCCAGCCATAAAACACAGTAAATTG 58.313 36.000 0.00 0.00 0.00 2.32
2577 2614 6.491745 TCCAGCCATAAAACACAGTAAATTGA 59.508 34.615 0.00 0.00 0.00 2.57
2578 2615 6.586082 CCAGCCATAAAACACAGTAAATTGAC 59.414 38.462 0.00 0.00 0.00 3.18
2579 2616 7.144661 CAGCCATAAAACACAGTAAATTGACA 58.855 34.615 0.00 0.00 0.00 3.58
2580 2617 7.814107 CAGCCATAAAACACAGTAAATTGACAT 59.186 33.333 0.00 0.00 0.00 3.06
2581 2618 8.367156 AGCCATAAAACACAGTAAATTGACATT 58.633 29.630 0.00 0.00 0.00 2.71
2582 2619 8.987890 GCCATAAAACACAGTAAATTGACATTT 58.012 29.630 0.00 0.00 36.52 2.32
2587 2624 9.868277 AAAACACAGTAAATTGACATTTTCAGA 57.132 25.926 0.00 0.00 34.94 3.27
2609 2646 9.747898 TCAGATATTACATTTTGTGGTAAAGGT 57.252 29.630 0.00 0.00 36.21 3.50
2614 2651 5.923733 ACATTTTGTGGTAAAGGTTGACA 57.076 34.783 0.00 0.00 28.56 3.58
2615 2652 6.478512 ACATTTTGTGGTAAAGGTTGACAT 57.521 33.333 0.00 0.00 28.56 3.06
2616 2653 6.883744 ACATTTTGTGGTAAAGGTTGACATT 58.116 32.000 0.00 0.00 28.56 2.71
2617 2654 7.334858 ACATTTTGTGGTAAAGGTTGACATTT 58.665 30.769 0.00 0.00 28.56 2.32
2618 2655 8.478877 ACATTTTGTGGTAAAGGTTGACATTTA 58.521 29.630 0.00 0.00 28.56 1.40
2619 2656 8.977505 CATTTTGTGGTAAAGGTTGACATTTAG 58.022 33.333 1.65 0.00 33.52 1.85
2620 2657 7.883391 TTTGTGGTAAAGGTTGACATTTAGA 57.117 32.000 1.65 0.00 33.52 2.10
2621 2658 8.472007 TTTGTGGTAAAGGTTGACATTTAGAT 57.528 30.769 1.65 0.00 33.52 1.98
2622 2659 9.575868 TTTGTGGTAAAGGTTGACATTTAGATA 57.424 29.630 1.65 0.00 33.52 1.98
2623 2660 8.556213 TGTGGTAAAGGTTGACATTTAGATAC 57.444 34.615 1.65 3.18 33.52 2.24
2624 2661 8.158132 TGTGGTAAAGGTTGACATTTAGATACA 58.842 33.333 1.65 5.21 33.52 2.29
2625 2662 8.665685 GTGGTAAAGGTTGACATTTAGATACAG 58.334 37.037 1.65 0.00 33.52 2.74
2626 2663 8.598916 TGGTAAAGGTTGACATTTAGATACAGA 58.401 33.333 1.65 0.00 33.52 3.41
2627 2664 9.099454 GGTAAAGGTTGACATTTAGATACAGAG 57.901 37.037 1.65 0.00 33.52 3.35
2628 2665 9.871238 GTAAAGGTTGACATTTAGATACAGAGA 57.129 33.333 1.65 0.00 33.52 3.10
2629 2666 8.779354 AAAGGTTGACATTTAGATACAGAGAC 57.221 34.615 0.00 0.00 0.00 3.36
2630 2667 7.726033 AGGTTGACATTTAGATACAGAGACT 57.274 36.000 0.00 0.00 0.00 3.24
2631 2668 8.140112 AGGTTGACATTTAGATACAGAGACTT 57.860 34.615 0.00 0.00 0.00 3.01
2632 2669 8.598041 AGGTTGACATTTAGATACAGAGACTTT 58.402 33.333 0.00 0.00 0.00 2.66
2633 2670 9.871238 GGTTGACATTTAGATACAGAGACTTTA 57.129 33.333 0.00 0.00 0.00 1.85
2644 2681 9.678260 AGATACAGAGACTTTATTTGCATTCTT 57.322 29.630 0.00 0.00 0.00 2.52
2645 2682 9.713740 GATACAGAGACTTTATTTGCATTCTTG 57.286 33.333 0.00 0.00 0.00 3.02
2659 2696 5.944049 GCATTCTTGCTATTGACATGTTG 57.056 39.130 0.00 0.00 45.77 3.33
2660 2697 4.266976 GCATTCTTGCTATTGACATGTTGC 59.733 41.667 0.00 0.00 45.77 4.17
2661 2698 5.404096 CATTCTTGCTATTGACATGTTGCA 58.596 37.500 0.00 3.68 0.00 4.08
2662 2699 4.690184 TCTTGCTATTGACATGTTGCAG 57.310 40.909 0.00 0.00 0.00 4.41
2663 2700 4.325972 TCTTGCTATTGACATGTTGCAGA 58.674 39.130 0.00 4.02 0.00 4.26
2664 2701 4.945543 TCTTGCTATTGACATGTTGCAGAT 59.054 37.500 0.00 0.00 0.00 2.90
2665 2702 6.114767 TCTTGCTATTGACATGTTGCAGATA 58.885 36.000 0.00 0.00 0.00 1.98
2666 2703 5.996669 TGCTATTGACATGTTGCAGATAG 57.003 39.130 0.00 5.37 0.00 2.08
2667 2704 5.430886 TGCTATTGACATGTTGCAGATAGT 58.569 37.500 0.00 0.00 0.00 2.12
2668 2705 5.882000 TGCTATTGACATGTTGCAGATAGTT 59.118 36.000 0.00 0.00 0.00 2.24
2669 2706 6.375174 TGCTATTGACATGTTGCAGATAGTTT 59.625 34.615 0.00 0.00 0.00 2.66
2670 2707 7.552330 TGCTATTGACATGTTGCAGATAGTTTA 59.448 33.333 0.00 0.00 0.00 2.01
2671 2708 8.397906 GCTATTGACATGTTGCAGATAGTTTAA 58.602 33.333 0.00 0.00 0.00 1.52
2674 2711 8.565896 TTGACATGTTGCAGATAGTTTAATCT 57.434 30.769 0.00 0.00 36.64 2.40
2686 2723 9.979270 CAGATAGTTTAATCTGTTGACATGTTC 57.021 33.333 0.00 0.00 45.19 3.18
2687 2724 9.725019 AGATAGTTTAATCTGTTGACATGTTCA 57.275 29.630 0.00 0.00 34.87 3.18
2695 2732 7.951530 ATCTGTTGACATGTTCAAAATTTCC 57.048 32.000 0.00 0.00 46.09 3.13
2696 2733 6.871844 TCTGTTGACATGTTCAAAATTTCCA 58.128 32.000 0.00 0.00 46.09 3.53
2697 2734 7.499292 TCTGTTGACATGTTCAAAATTTCCAT 58.501 30.769 0.00 0.00 46.09 3.41
2698 2735 7.438757 TCTGTTGACATGTTCAAAATTTCCATG 59.561 33.333 0.00 13.89 46.09 3.66
2699 2736 6.018098 TGTTGACATGTTCAAAATTTCCATGC 60.018 34.615 0.00 10.63 46.09 4.06
2700 2737 5.608449 TGACATGTTCAAAATTTCCATGCA 58.392 33.333 0.00 0.00 37.10 3.96
2701 2738 5.466058 TGACATGTTCAAAATTTCCATGCAC 59.534 36.000 0.00 11.53 37.10 4.57
2702 2739 5.366460 ACATGTTCAAAATTTCCATGCACA 58.634 33.333 14.78 7.70 37.10 4.57
2703 2740 5.236911 ACATGTTCAAAATTTCCATGCACAC 59.763 36.000 14.78 1.64 37.10 3.82
2704 2741 4.763073 TGTTCAAAATTTCCATGCACACA 58.237 34.783 0.00 0.00 0.00 3.72
2705 2742 4.569966 TGTTCAAAATTTCCATGCACACAC 59.430 37.500 0.00 0.00 0.00 3.82
2706 2743 4.397481 TCAAAATTTCCATGCACACACA 57.603 36.364 0.00 0.00 0.00 3.72
2707 2744 4.370049 TCAAAATTTCCATGCACACACAG 58.630 39.130 0.00 0.00 0.00 3.66
2708 2745 3.389925 AAATTTCCATGCACACACAGG 57.610 42.857 0.00 0.00 0.00 4.00
2709 2746 2.291209 ATTTCCATGCACACACAGGA 57.709 45.000 0.00 0.00 32.91 3.86
2710 2747 2.064434 TTTCCATGCACACACAGGAA 57.936 45.000 0.00 0.00 39.99 3.36
2711 2748 2.064434 TTCCATGCACACACAGGAAA 57.936 45.000 0.00 0.00 39.24 3.13
2712 2749 1.317613 TCCATGCACACACAGGAAAC 58.682 50.000 0.00 0.00 32.09 2.78
2713 2750 1.133823 TCCATGCACACACAGGAAACT 60.134 47.619 0.00 0.00 46.44 2.66
2724 2761 3.658398 AGGAAACTGTGGGCTCATG 57.342 52.632 0.00 0.00 41.13 3.07
2725 2762 0.773644 AGGAAACTGTGGGCTCATGT 59.226 50.000 0.00 0.00 41.13 3.21
2726 2763 1.145738 AGGAAACTGTGGGCTCATGTT 59.854 47.619 0.00 0.00 41.13 2.71
2727 2764 1.270550 GGAAACTGTGGGCTCATGTTG 59.729 52.381 8.39 0.00 0.00 3.33
2728 2765 2.229792 GAAACTGTGGGCTCATGTTGA 58.770 47.619 8.39 0.00 0.00 3.18
2729 2766 1.609208 AACTGTGGGCTCATGTTGAC 58.391 50.000 7.06 0.00 0.00 3.18
2730 2767 0.473755 ACTGTGGGCTCATGTTGACA 59.526 50.000 0.00 0.00 0.00 3.58
2731 2768 1.133823 ACTGTGGGCTCATGTTGACAA 60.134 47.619 0.00 0.00 0.00 3.18
2732 2769 2.165167 CTGTGGGCTCATGTTGACAAT 58.835 47.619 0.00 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 5.770663 ACACTAGTCGGCAATCTCATAGTAT 59.229 40.000 0.00 0.00 0.00 2.12
142 143 4.837860 AGAGAGAGAGAGAGAGAGAGATCC 59.162 50.000 0.00 0.00 0.00 3.36
143 144 5.774690 AGAGAGAGAGAGAGAGAGAGAGATC 59.225 48.000 0.00 0.00 0.00 2.75
144 145 5.714863 AGAGAGAGAGAGAGAGAGAGAGAT 58.285 45.833 0.00 0.00 0.00 2.75
145 146 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
146 147 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
147 148 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
148 149 4.892345 TGAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
149 150 4.646945 GTGAGAGAGAGAGAGAGAGAGAGA 59.353 50.000 0.00 0.00 0.00 3.10
150 151 4.403752 TGTGAGAGAGAGAGAGAGAGAGAG 59.596 50.000 0.00 0.00 0.00 3.20
151 152 4.160439 GTGTGAGAGAGAGAGAGAGAGAGA 59.840 50.000 0.00 0.00 0.00 3.10
152 153 4.081476 TGTGTGAGAGAGAGAGAGAGAGAG 60.081 50.000 0.00 0.00 0.00 3.20
153 154 3.837731 TGTGTGAGAGAGAGAGAGAGAGA 59.162 47.826 0.00 0.00 0.00 3.10
154 155 3.935203 GTGTGTGAGAGAGAGAGAGAGAG 59.065 52.174 0.00 0.00 0.00 3.20
155 156 3.326297 TGTGTGTGAGAGAGAGAGAGAGA 59.674 47.826 0.00 0.00 0.00 3.10
156 157 3.436704 GTGTGTGTGAGAGAGAGAGAGAG 59.563 52.174 0.00 0.00 0.00 3.20
157 158 3.181450 TGTGTGTGTGAGAGAGAGAGAGA 60.181 47.826 0.00 0.00 0.00 3.10
158 159 3.058293 GTGTGTGTGTGAGAGAGAGAGAG 60.058 52.174 0.00 0.00 0.00 3.20
159 160 2.881513 GTGTGTGTGTGAGAGAGAGAGA 59.118 50.000 0.00 0.00 0.00 3.10
160 161 2.620585 TGTGTGTGTGTGAGAGAGAGAG 59.379 50.000 0.00 0.00 0.00 3.20
161 162 2.359214 GTGTGTGTGTGTGAGAGAGAGA 59.641 50.000 0.00 0.00 0.00 3.10
162 163 2.099756 TGTGTGTGTGTGTGAGAGAGAG 59.900 50.000 0.00 0.00 0.00 3.20
163 164 2.099405 TGTGTGTGTGTGTGAGAGAGA 58.901 47.619 0.00 0.00 0.00 3.10
164 165 2.196749 GTGTGTGTGTGTGTGAGAGAG 58.803 52.381 0.00 0.00 0.00 3.20
165 166 1.548269 TGTGTGTGTGTGTGTGAGAGA 59.452 47.619 0.00 0.00 0.00 3.10
166 167 1.660607 GTGTGTGTGTGTGTGTGAGAG 59.339 52.381 0.00 0.00 0.00 3.20
167 168 1.001406 TGTGTGTGTGTGTGTGTGAGA 59.999 47.619 0.00 0.00 0.00 3.27
168 169 1.128507 GTGTGTGTGTGTGTGTGTGAG 59.871 52.381 0.00 0.00 0.00 3.51
169 170 1.152510 GTGTGTGTGTGTGTGTGTGA 58.847 50.000 0.00 0.00 0.00 3.58
170 171 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
171 172 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
172 173 0.179227 CGTGTGTGTGTGTGTGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
173 174 0.319986 TCGTGTGTGTGTGTGTGTGT 60.320 50.000 0.00 0.00 0.00 3.72
174 175 0.094558 GTCGTGTGTGTGTGTGTGTG 59.905 55.000 0.00 0.00 0.00 3.82
175 176 0.037697 AGTCGTGTGTGTGTGTGTGT 60.038 50.000 0.00 0.00 0.00 3.72
176 177 0.369931 CAGTCGTGTGTGTGTGTGTG 59.630 55.000 0.00 0.00 0.00 3.82
177 178 1.358725 GCAGTCGTGTGTGTGTGTGT 61.359 55.000 0.00 0.00 0.00 3.72
178 179 1.083806 AGCAGTCGTGTGTGTGTGTG 61.084 55.000 0.00 0.00 0.00 3.82
179 180 1.083806 CAGCAGTCGTGTGTGTGTGT 61.084 55.000 0.00 0.00 0.00 3.72
180 181 0.805711 TCAGCAGTCGTGTGTGTGTG 60.806 55.000 0.00 0.00 0.00 3.82
181 182 0.528466 CTCAGCAGTCGTGTGTGTGT 60.528 55.000 0.00 0.00 0.00 3.72
182 183 1.217585 CCTCAGCAGTCGTGTGTGTG 61.218 60.000 0.00 0.00 0.00 3.82
183 184 1.068083 CCTCAGCAGTCGTGTGTGT 59.932 57.895 0.00 0.00 0.00 3.72
184 185 1.068083 ACCTCAGCAGTCGTGTGTG 59.932 57.895 0.00 0.00 0.00 3.82
185 186 1.068083 CACCTCAGCAGTCGTGTGT 59.932 57.895 0.00 0.00 0.00 3.72
186 187 0.249447 TTCACCTCAGCAGTCGTGTG 60.249 55.000 0.00 0.00 0.00 3.82
187 188 0.464036 TTTCACCTCAGCAGTCGTGT 59.536 50.000 0.00 0.00 0.00 4.49
188 189 1.143305 CTTTCACCTCAGCAGTCGTG 58.857 55.000 0.00 0.00 0.00 4.35
189 190 0.034059 CCTTTCACCTCAGCAGTCGT 59.966 55.000 0.00 0.00 0.00 4.34
190 191 1.294659 GCCTTTCACCTCAGCAGTCG 61.295 60.000 0.00 0.00 0.00 4.18
191 192 0.957888 GGCCTTTCACCTCAGCAGTC 60.958 60.000 0.00 0.00 0.00 3.51
192 193 1.073897 GGCCTTTCACCTCAGCAGT 59.926 57.895 0.00 0.00 0.00 4.40
193 194 1.073722 TGGCCTTTCACCTCAGCAG 59.926 57.895 3.32 0.00 0.00 4.24
194 195 1.228245 GTGGCCTTTCACCTCAGCA 60.228 57.895 3.32 0.00 0.00 4.41
195 196 2.328099 CGTGGCCTTTCACCTCAGC 61.328 63.158 3.32 0.00 34.36 4.26
196 197 2.328099 GCGTGGCCTTTCACCTCAG 61.328 63.158 3.32 0.00 34.36 3.35
197 198 2.281484 GCGTGGCCTTTCACCTCA 60.281 61.111 3.32 0.00 34.36 3.86
198 199 3.056328 GGCGTGGCCTTTCACCTC 61.056 66.667 3.32 0.00 46.69 3.85
270 271 3.922240 CGGTGCCTGAATTTTCATTTCAG 59.078 43.478 6.47 6.47 46.23 3.02
283 284 1.990160 AACTTCCAACCGGTGCCTGA 61.990 55.000 8.52 0.00 0.00 3.86
330 331 3.669939 ATCAATCCCCTTTACCTGTGG 57.330 47.619 0.00 0.00 0.00 4.17
334 335 5.134339 TGCATCTTATCAATCCCCTTTACCT 59.866 40.000 0.00 0.00 0.00 3.08
340 341 2.715336 AGCTGCATCTTATCAATCCCCT 59.285 45.455 1.02 0.00 0.00 4.79
389 390 3.834231 AGATTGGTGATGGTTTTTCCCTG 59.166 43.478 0.00 0.00 34.77 4.45
398 399 6.670027 AGAAGTAGTAGAAGATTGGTGATGGT 59.330 38.462 0.00 0.00 0.00 3.55
417 418 1.136305 GCACCACGCCTATCAGAAGTA 59.864 52.381 0.00 0.00 32.94 2.24
441 448 6.051717 CCACATTATAACCTCTGTCTTCTGG 58.948 44.000 0.00 0.00 0.00 3.86
451 458 6.357367 AGAATGACACCCACATTATAACCTC 58.643 40.000 0.00 0.00 37.96 3.85
465 472 4.184629 AGCGATGAACTTAGAATGACACC 58.815 43.478 0.00 0.00 0.00 4.16
514 521 7.992754 ATGAGCCACTATTGGATTTCTATTC 57.007 36.000 2.72 0.00 43.53 1.75
543 550 9.601217 AGATATATAGCCACCAAATTACGAATC 57.399 33.333 0.00 0.00 0.00 2.52
564 571 8.532819 GGAGACCGGAAAATAACTATCAGATAT 58.467 37.037 9.46 0.00 0.00 1.63
572 579 4.081309 CACCAGGAGACCGGAAAATAACTA 60.081 45.833 9.46 0.00 0.00 2.24
583 590 0.951040 GCTTGTTCACCAGGAGACCG 60.951 60.000 0.00 0.00 0.00 4.79
595 602 2.670414 CAGTCTGATTCCGAGCTTGTTC 59.330 50.000 0.00 0.00 0.00 3.18
634 641 6.238484 GCTGAGAGTTTGTTTTCTTGCTCTAA 60.238 38.462 0.00 0.00 33.99 2.10
648 655 6.648310 TCTGTTTTGATCTAGCTGAGAGTTTG 59.352 38.462 0.00 0.00 37.70 2.93
686 698 3.308035 TCCGAGGTACAGTATGGATGT 57.692 47.619 0.00 0.00 43.62 3.06
722 734 5.332808 GCATTGTTCTGTTGAGTCATTTTGC 60.333 40.000 0.00 0.00 0.00 3.68
723 735 5.981315 AGCATTGTTCTGTTGAGTCATTTTG 59.019 36.000 0.00 0.00 0.00 2.44
724 736 6.152932 AGCATTGTTCTGTTGAGTCATTTT 57.847 33.333 0.00 0.00 0.00 1.82
728 740 4.515191 GGTAAGCATTGTTCTGTTGAGTCA 59.485 41.667 0.00 0.00 0.00 3.41
729 741 4.757149 AGGTAAGCATTGTTCTGTTGAGTC 59.243 41.667 0.00 0.00 0.00 3.36
811 824 9.434420 TCATCATCTTTGTCTTTGTTTTTGTTT 57.566 25.926 0.00 0.00 0.00 2.83
812 825 9.603921 ATCATCATCTTTGTCTTTGTTTTTGTT 57.396 25.926 0.00 0.00 0.00 2.83
813 826 9.037737 CATCATCATCTTTGTCTTTGTTTTTGT 57.962 29.630 0.00 0.00 0.00 2.83
814 827 9.251792 TCATCATCATCTTTGTCTTTGTTTTTG 57.748 29.630 0.00 0.00 0.00 2.44
815 828 9.820725 TTCATCATCATCTTTGTCTTTGTTTTT 57.179 25.926 0.00 0.00 0.00 1.94
816 829 9.991906 ATTCATCATCATCTTTGTCTTTGTTTT 57.008 25.926 0.00 0.00 0.00 2.43
881 894 2.046892 GGTGTGGCGTGCTCATCT 60.047 61.111 0.00 0.00 0.00 2.90
914 927 3.195610 CAGGTATGGAGTAAGTGTGCTCA 59.804 47.826 0.00 0.00 38.18 4.26
931 944 4.563580 GCTCAACTTGGATCAACTCAGGTA 60.564 45.833 0.00 0.00 0.00 3.08
932 945 3.808618 GCTCAACTTGGATCAACTCAGGT 60.809 47.826 0.00 0.00 0.00 4.00
933 946 2.746362 GCTCAACTTGGATCAACTCAGG 59.254 50.000 0.00 0.00 0.00 3.86
934 947 3.188048 GTGCTCAACTTGGATCAACTCAG 59.812 47.826 0.00 0.00 0.00 3.35
935 948 3.141398 GTGCTCAACTTGGATCAACTCA 58.859 45.455 0.00 0.00 0.00 3.41
936 949 3.058639 GTGTGCTCAACTTGGATCAACTC 60.059 47.826 0.00 0.00 0.00 3.01
937 950 2.880890 GTGTGCTCAACTTGGATCAACT 59.119 45.455 0.00 0.00 0.00 3.16
938 951 2.880890 AGTGTGCTCAACTTGGATCAAC 59.119 45.455 0.00 0.00 0.00 3.18
939 952 3.213206 AGTGTGCTCAACTTGGATCAA 57.787 42.857 0.00 0.00 0.00 2.57
940 953 2.936919 AGTGTGCTCAACTTGGATCA 57.063 45.000 0.00 0.00 0.00 2.92
941 954 4.319177 AGTAAGTGTGCTCAACTTGGATC 58.681 43.478 8.81 0.00 0.00 3.36
942 955 4.319177 GAGTAAGTGTGCTCAACTTGGAT 58.681 43.478 8.81 0.00 36.56 3.41
943 956 3.494398 GGAGTAAGTGTGCTCAACTTGGA 60.494 47.826 8.81 0.00 38.18 3.53
944 957 2.808543 GGAGTAAGTGTGCTCAACTTGG 59.191 50.000 8.81 0.00 38.18 3.61
945 958 3.466836 TGGAGTAAGTGTGCTCAACTTG 58.533 45.455 8.81 0.00 38.18 3.16
946 959 3.838244 TGGAGTAAGTGTGCTCAACTT 57.162 42.857 0.00 0.00 38.18 2.66
947 960 4.322801 GGTATGGAGTAAGTGTGCTCAACT 60.323 45.833 0.00 0.00 38.18 3.16
948 961 3.933332 GGTATGGAGTAAGTGTGCTCAAC 59.067 47.826 0.00 0.00 38.18 3.18
949 962 3.838317 AGGTATGGAGTAAGTGTGCTCAA 59.162 43.478 0.00 0.00 38.18 3.02
950 963 3.195610 CAGGTATGGAGTAAGTGTGCTCA 59.804 47.826 0.00 0.00 38.18 4.26
951 964 3.447586 TCAGGTATGGAGTAAGTGTGCTC 59.552 47.826 0.00 0.00 35.86 4.26
952 965 3.441101 TCAGGTATGGAGTAAGTGTGCT 58.559 45.455 0.00 0.00 0.00 4.40
953 966 3.195825 ACTCAGGTATGGAGTAAGTGTGC 59.804 47.826 0.00 0.00 43.50 4.57
954 967 5.047306 TCAACTCAGGTATGGAGTAAGTGTG 60.047 44.000 0.00 0.00 44.50 3.82
955 968 5.084519 TCAACTCAGGTATGGAGTAAGTGT 58.915 41.667 0.00 0.00 44.50 3.55
956 969 5.661056 TCAACTCAGGTATGGAGTAAGTG 57.339 43.478 0.00 0.00 44.50 3.16
957 970 5.364157 GGATCAACTCAGGTATGGAGTAAGT 59.636 44.000 0.00 0.00 44.50 2.24
958 971 5.363868 TGGATCAACTCAGGTATGGAGTAAG 59.636 44.000 0.00 0.00 44.50 2.34
959 972 5.277250 TGGATCAACTCAGGTATGGAGTAA 58.723 41.667 0.00 0.00 44.50 2.24
960 973 4.878968 TGGATCAACTCAGGTATGGAGTA 58.121 43.478 0.00 0.00 44.50 2.59
962 975 4.163078 ACTTGGATCAACTCAGGTATGGAG 59.837 45.833 0.00 0.00 38.36 3.86
963 976 4.104086 ACTTGGATCAACTCAGGTATGGA 58.896 43.478 0.00 0.00 0.00 3.41
966 979 5.738909 CTCAACTTGGATCAACTCAGGTAT 58.261 41.667 0.00 0.00 0.00 2.73
971 984 3.141398 GTGCTCAACTTGGATCAACTCA 58.859 45.455 0.00 0.00 0.00 3.41
1001 1014 1.667236 CATTGATCTGGTTAGCGCCA 58.333 50.000 2.29 0.00 36.97 5.69
1017 1030 1.981256 ACGTCAGGAGCAAAACCATT 58.019 45.000 0.00 0.00 0.00 3.16
1068 1081 0.900647 CCTGTGTCCTCTCTTCCGGT 60.901 60.000 0.00 0.00 0.00 5.28
1081 1094 4.988598 CGCCTTGACCGCCTGTGT 62.989 66.667 0.00 0.00 0.00 3.72
1090 1103 3.044059 GCACTGATGGCGCCTTGAC 62.044 63.158 29.70 15.95 0.00 3.18
1124 1137 3.804193 CGGCTTCGGCTTCTTGGC 61.804 66.667 0.00 0.00 41.44 4.52
1125 1138 1.639298 CTTCGGCTTCGGCTTCTTGG 61.639 60.000 0.00 0.00 41.44 3.61
1126 1139 1.790387 CTTCGGCTTCGGCTTCTTG 59.210 57.895 0.00 0.00 41.44 3.02
1127 1140 2.035442 GCTTCGGCTTCGGCTTCTT 61.035 57.895 0.00 0.00 41.44 2.52
1128 1141 2.435059 GCTTCGGCTTCGGCTTCT 60.435 61.111 0.00 0.00 41.44 2.85
1129 1142 3.854459 CGCTTCGGCTTCGGCTTC 61.854 66.667 0.00 0.00 41.44 3.86
1170 1183 1.071019 CGACGTCGGTGATTGGTGAG 61.071 60.000 29.70 0.00 35.37 3.51
1171 1184 1.081041 CGACGTCGGTGATTGGTGA 60.081 57.895 29.70 0.00 35.37 4.02
1173 1186 1.211969 CTCGACGTCGGTGATTGGT 59.788 57.895 35.05 0.00 40.29 3.67
1174 1187 1.516386 CCTCGACGTCGGTGATTGG 60.516 63.158 35.05 22.26 40.29 3.16
1176 1189 0.959372 AGACCTCGACGTCGGTGATT 60.959 55.000 35.05 17.08 40.29 2.57
1177 1190 0.959372 AAGACCTCGACGTCGGTGAT 60.959 55.000 35.05 17.60 40.29 3.06
1178 1191 1.572085 GAAGACCTCGACGTCGGTGA 61.572 60.000 35.05 17.29 40.29 4.02
1184 1203 1.654954 CGGGATGAAGACCTCGACGT 61.655 60.000 0.00 0.00 0.00 4.34
1189 1208 1.153349 GTGCCGGGATGAAGACCTC 60.153 63.158 2.18 0.00 0.00 3.85
1190 1209 2.670148 GGTGCCGGGATGAAGACCT 61.670 63.158 2.18 0.00 0.00 3.85
1335 1366 2.488820 GAGTCGGTGAGGTACGGC 59.511 66.667 0.00 0.00 34.42 5.68
1361 1392 3.770040 AGCATGTACTCGGCGGCA 61.770 61.111 10.53 1.70 0.00 5.69
1756 1787 6.316890 AGTCGACTTCTAAATAGACACTCCTC 59.683 42.308 13.58 0.00 30.81 3.71
1869 1904 3.636231 CAAGGCCCGGGTGTGAGA 61.636 66.667 24.63 0.00 0.00 3.27
1870 1905 1.910580 ATACAAGGCCCGGGTGTGAG 61.911 60.000 24.63 11.36 0.00 3.51
1918 1954 1.475280 GTCCAGTCCAGCGTACATACA 59.525 52.381 0.00 0.00 0.00 2.29
1960 1996 2.969950 GGCTTTTCCCCCTGTAGTTTTT 59.030 45.455 0.00 0.00 0.00 1.94
1961 1997 2.179204 AGGCTTTTCCCCCTGTAGTTTT 59.821 45.455 0.00 0.00 34.51 2.43
1962 1998 1.787058 AGGCTTTTCCCCCTGTAGTTT 59.213 47.619 0.00 0.00 34.51 2.66
1963 1999 1.456919 AGGCTTTTCCCCCTGTAGTT 58.543 50.000 0.00 0.00 34.51 2.24
1964 2000 1.914108 GTAGGCTTTTCCCCCTGTAGT 59.086 52.381 0.00 0.00 34.51 2.73
1965 2001 1.913419 TGTAGGCTTTTCCCCCTGTAG 59.087 52.381 0.00 0.00 34.51 2.74
1966 2002 1.913419 CTGTAGGCTTTTCCCCCTGTA 59.087 52.381 0.00 0.00 34.51 2.74
1967 2003 0.698818 CTGTAGGCTTTTCCCCCTGT 59.301 55.000 0.00 0.00 34.51 4.00
1968 2004 0.991920 TCTGTAGGCTTTTCCCCCTG 59.008 55.000 0.00 0.00 34.51 4.45
1969 2005 0.992695 GTCTGTAGGCTTTTCCCCCT 59.007 55.000 0.00 0.00 34.51 4.79
1970 2006 0.992695 AGTCTGTAGGCTTTTCCCCC 59.007 55.000 0.00 0.00 34.51 5.40
1971 2007 1.628846 TGAGTCTGTAGGCTTTTCCCC 59.371 52.381 0.00 0.00 34.51 4.81
1972 2008 3.075148 GTTGAGTCTGTAGGCTTTTCCC 58.925 50.000 0.00 0.00 34.51 3.97
1973 2009 3.740115 TGTTGAGTCTGTAGGCTTTTCC 58.260 45.455 0.00 0.00 0.00 3.13
1974 2010 4.816925 AGTTGTTGAGTCTGTAGGCTTTTC 59.183 41.667 0.00 0.00 0.00 2.29
1975 2011 4.576463 CAGTTGTTGAGTCTGTAGGCTTTT 59.424 41.667 0.00 0.00 0.00 2.27
1976 2012 4.130118 CAGTTGTTGAGTCTGTAGGCTTT 58.870 43.478 0.00 0.00 0.00 3.51
1977 2013 3.388024 TCAGTTGTTGAGTCTGTAGGCTT 59.612 43.478 0.00 0.00 0.00 4.35
1978 2014 2.965831 TCAGTTGTTGAGTCTGTAGGCT 59.034 45.455 0.00 0.00 0.00 4.58
1979 2015 3.321497 CTCAGTTGTTGAGTCTGTAGGC 58.679 50.000 0.00 0.00 46.77 3.93
1997 2033 3.055819 GCATAAGGTGTTCTGAGGACTCA 60.056 47.826 1.61 1.61 38.06 3.41
1998 2034 3.526534 GCATAAGGTGTTCTGAGGACTC 58.473 50.000 0.00 0.00 0.00 3.36
1999 2035 2.093973 CGCATAAGGTGTTCTGAGGACT 60.094 50.000 0.00 0.00 0.00 3.85
2000 2036 2.271800 CGCATAAGGTGTTCTGAGGAC 58.728 52.381 0.00 0.00 0.00 3.85
2001 2037 1.405526 GCGCATAAGGTGTTCTGAGGA 60.406 52.381 0.30 0.00 0.00 3.71
2002 2038 1.009829 GCGCATAAGGTGTTCTGAGG 58.990 55.000 0.30 0.00 0.00 3.86
2003 2039 1.725641 TGCGCATAAGGTGTTCTGAG 58.274 50.000 5.66 0.00 0.00 3.35
2004 2040 2.177394 TTGCGCATAAGGTGTTCTGA 57.823 45.000 12.75 0.00 0.00 3.27
2005 2041 2.987413 TTTGCGCATAAGGTGTTCTG 57.013 45.000 12.75 0.00 0.00 3.02
2030 2066 4.902448 AGTTTAGGTGTTCTGAGGACTCTT 59.098 41.667 0.56 0.00 0.00 2.85
2031 2067 4.484912 AGTTTAGGTGTTCTGAGGACTCT 58.515 43.478 0.56 0.00 0.00 3.24
2039 2075 3.694566 GCCCCATTAGTTTAGGTGTTCTG 59.305 47.826 0.00 0.00 0.00 3.02
2046 2082 5.993748 TTTTTGAGCCCCATTAGTTTAGG 57.006 39.130 0.00 0.00 0.00 2.69
2095 2132 1.831343 GCTGGCAATAATGTTCAGCG 58.169 50.000 10.79 0.00 41.90 5.18
2102 2139 5.579511 CCTCTTCTTTTTGCTGGCAATAATG 59.420 40.000 8.86 8.54 35.70 1.90
2218 2255 3.769739 ACAGTATTGTGTTCAGAGGCA 57.230 42.857 0.00 0.00 35.83 4.75
2219 2256 4.822026 ACTACAGTATTGTGTTCAGAGGC 58.178 43.478 0.34 0.00 38.23 4.70
2220 2257 7.827701 TCTTACTACAGTATTGTGTTCAGAGG 58.172 38.462 0.34 0.00 38.23 3.69
2221 2258 9.347934 CTTCTTACTACAGTATTGTGTTCAGAG 57.652 37.037 0.34 0.00 38.23 3.35
2222 2259 8.304596 CCTTCTTACTACAGTATTGTGTTCAGA 58.695 37.037 0.34 1.39 38.23 3.27
2223 2260 8.304596 TCCTTCTTACTACAGTATTGTGTTCAG 58.695 37.037 0.34 0.00 38.23 3.02
2224 2261 8.185506 TCCTTCTTACTACAGTATTGTGTTCA 57.814 34.615 0.34 0.00 38.23 3.18
2225 2262 8.923683 GTTCCTTCTTACTACAGTATTGTGTTC 58.076 37.037 0.34 0.00 38.23 3.18
2226 2263 8.426489 TGTTCCTTCTTACTACAGTATTGTGTT 58.574 33.333 0.34 0.00 38.23 3.32
2227 2264 7.959175 TGTTCCTTCTTACTACAGTATTGTGT 58.041 34.615 0.34 0.57 38.23 3.72
2228 2265 8.827177 TTGTTCCTTCTTACTACAGTATTGTG 57.173 34.615 0.34 0.00 38.23 3.33
2263 2300 9.603921 GGGTAGCTTTAATGTAATTACACTGTA 57.396 33.333 20.26 10.25 38.79 2.74
2264 2301 7.555195 GGGGTAGCTTTAATGTAATTACACTGT 59.445 37.037 20.26 11.17 38.79 3.55
2265 2302 7.254658 CGGGGTAGCTTTAATGTAATTACACTG 60.255 40.741 20.26 9.81 38.79 3.66
2266 2303 6.764560 CGGGGTAGCTTTAATGTAATTACACT 59.235 38.462 20.26 12.60 38.79 3.55
2267 2304 6.512253 GCGGGGTAGCTTTAATGTAATTACAC 60.512 42.308 20.26 6.96 38.79 2.90
2268 2305 5.528320 GCGGGGTAGCTTTAATGTAATTACA 59.472 40.000 20.14 20.14 38.79 2.41
2269 2306 5.528320 TGCGGGGTAGCTTTAATGTAATTAC 59.472 40.000 8.75 8.75 36.92 1.89
2270 2307 5.682659 TGCGGGGTAGCTTTAATGTAATTA 58.317 37.500 0.00 0.00 36.44 1.40
2271 2308 4.528920 TGCGGGGTAGCTTTAATGTAATT 58.471 39.130 0.00 0.00 38.01 1.40
2272 2309 4.159244 TGCGGGGTAGCTTTAATGTAAT 57.841 40.909 0.00 0.00 38.13 1.89
2273 2310 3.630892 TGCGGGGTAGCTTTAATGTAA 57.369 42.857 0.00 0.00 38.13 2.41
2274 2311 3.630892 TTGCGGGGTAGCTTTAATGTA 57.369 42.857 0.00 0.00 38.13 2.29
2275 2312 2.500392 TTGCGGGGTAGCTTTAATGT 57.500 45.000 0.00 0.00 38.13 2.71
2276 2313 3.859411 TTTTGCGGGGTAGCTTTAATG 57.141 42.857 0.00 0.00 38.13 1.90
2300 2337 9.278978 TCAGTGTAATCACAGCTTTAATGTAAA 57.721 29.630 1.36 0.00 46.01 2.01
2301 2338 8.840833 TCAGTGTAATCACAGCTTTAATGTAA 57.159 30.769 1.36 0.00 46.01 2.41
2302 2339 8.840833 TTCAGTGTAATCACAGCTTTAATGTA 57.159 30.769 1.36 0.00 46.01 2.29
2303 2340 7.744087 TTCAGTGTAATCACAGCTTTAATGT 57.256 32.000 1.36 0.00 46.01 2.71
2304 2341 9.630098 ATTTTCAGTGTAATCACAGCTTTAATG 57.370 29.630 1.36 0.00 46.01 1.90
2308 2345 9.846248 GATAATTTTCAGTGTAATCACAGCTTT 57.154 29.630 1.36 0.00 46.01 3.51
2309 2346 9.013229 TGATAATTTTCAGTGTAATCACAGCTT 57.987 29.630 0.00 0.00 46.01 3.74
2310 2347 8.565896 TGATAATTTTCAGTGTAATCACAGCT 57.434 30.769 0.00 0.00 46.01 4.24
2311 2348 8.832487 CTGATAATTTTCAGTGTAATCACAGC 57.168 34.615 15.47 0.00 46.01 4.40
2333 2370 8.714179 CGGTGTTTTCTAATGTAATTACACTGA 58.286 33.333 20.26 14.71 38.45 3.41
2334 2371 8.500773 ACGGTGTTTTCTAATGTAATTACACTG 58.499 33.333 20.26 13.03 40.31 3.66
2335 2372 8.500773 CACGGTGTTTTCTAATGTAATTACACT 58.499 33.333 20.26 12.60 39.30 3.55
2336 2373 8.497554 TCACGGTGTTTTCTAATGTAATTACAC 58.502 33.333 20.26 6.37 39.30 2.90
2337 2374 8.604640 TCACGGTGTTTTCTAATGTAATTACA 57.395 30.769 20.14 20.14 37.87 2.41
2341 2378 9.221933 TGTAATCACGGTGTTTTCTAATGTAAT 57.778 29.630 8.17 0.00 0.00 1.89
2342 2379 8.497554 GTGTAATCACGGTGTTTTCTAATGTAA 58.502 33.333 8.17 0.00 34.79 2.41
2343 2380 8.020861 GTGTAATCACGGTGTTTTCTAATGTA 57.979 34.615 8.17 0.00 34.79 2.29
2344 2381 6.894828 GTGTAATCACGGTGTTTTCTAATGT 58.105 36.000 8.17 0.00 34.79 2.71
2403 2440 7.860373 TGCAGTAAAATTGAACAGTGATTACAC 59.140 33.333 0.00 0.00 46.24 2.90
2404 2441 7.935520 TGCAGTAAAATTGAACAGTGATTACA 58.064 30.769 0.00 0.00 0.00 2.41
2405 2442 8.970691 ATGCAGTAAAATTGAACAGTGATTAC 57.029 30.769 0.00 0.00 0.00 1.89
2409 2446 8.673711 GGTATATGCAGTAAAATTGAACAGTGA 58.326 33.333 0.00 0.00 0.00 3.41
2410 2447 7.915397 GGGTATATGCAGTAAAATTGAACAGTG 59.085 37.037 0.00 0.00 0.00 3.66
2411 2448 7.834181 AGGGTATATGCAGTAAAATTGAACAGT 59.166 33.333 0.00 0.00 0.00 3.55
2412 2449 8.225603 AGGGTATATGCAGTAAAATTGAACAG 57.774 34.615 0.00 0.00 0.00 3.16
2413 2450 9.860650 ATAGGGTATATGCAGTAAAATTGAACA 57.139 29.630 0.00 0.00 0.00 3.18
2463 2500 6.422400 GCGGGATTCTTTGACATTTGTAAAAA 59.578 34.615 0.00 0.00 28.56 1.94
2464 2501 5.923684 GCGGGATTCTTTGACATTTGTAAAA 59.076 36.000 0.00 0.00 0.00 1.52
2465 2502 5.242838 AGCGGGATTCTTTGACATTTGTAAA 59.757 36.000 0.00 0.00 0.00 2.01
2466 2503 4.764823 AGCGGGATTCTTTGACATTTGTAA 59.235 37.500 0.00 0.00 0.00 2.41
2467 2504 4.331968 AGCGGGATTCTTTGACATTTGTA 58.668 39.130 0.00 0.00 0.00 2.41
2468 2505 3.157087 AGCGGGATTCTTTGACATTTGT 58.843 40.909 0.00 0.00 0.00 2.83
2469 2506 3.855689 AGCGGGATTCTTTGACATTTG 57.144 42.857 0.00 0.00 0.00 2.32
2470 2507 6.530019 AATTAGCGGGATTCTTTGACATTT 57.470 33.333 0.00 0.00 0.00 2.32
2471 2508 6.601613 TGTAATTAGCGGGATTCTTTGACATT 59.398 34.615 0.00 0.00 0.00 2.71
2472 2509 6.038271 GTGTAATTAGCGGGATTCTTTGACAT 59.962 38.462 0.00 0.00 0.00 3.06
2473 2510 5.353123 GTGTAATTAGCGGGATTCTTTGACA 59.647 40.000 0.00 0.00 0.00 3.58
2474 2511 5.585047 AGTGTAATTAGCGGGATTCTTTGAC 59.415 40.000 0.00 0.00 0.00 3.18
2475 2512 5.584649 CAGTGTAATTAGCGGGATTCTTTGA 59.415 40.000 0.00 0.00 0.00 2.69
2476 2513 5.354234 ACAGTGTAATTAGCGGGATTCTTTG 59.646 40.000 0.00 0.00 0.00 2.77
2477 2514 5.497474 ACAGTGTAATTAGCGGGATTCTTT 58.503 37.500 0.00 0.00 0.00 2.52
2478 2515 5.099042 ACAGTGTAATTAGCGGGATTCTT 57.901 39.130 0.00 0.00 0.00 2.52
2479 2516 4.755266 ACAGTGTAATTAGCGGGATTCT 57.245 40.909 0.00 0.00 0.00 2.40
2480 2517 5.813080 AAACAGTGTAATTAGCGGGATTC 57.187 39.130 0.00 0.00 0.00 2.52
2481 2518 6.094464 GGTTAAACAGTGTAATTAGCGGGATT 59.906 38.462 0.00 0.00 0.00 3.01
2482 2519 5.587443 GGTTAAACAGTGTAATTAGCGGGAT 59.413 40.000 0.00 0.00 0.00 3.85
2483 2520 4.937015 GGTTAAACAGTGTAATTAGCGGGA 59.063 41.667 0.00 0.00 0.00 5.14
2484 2521 4.095334 GGGTTAAACAGTGTAATTAGCGGG 59.905 45.833 0.00 0.00 0.00 6.13
2485 2522 4.939439 AGGGTTAAACAGTGTAATTAGCGG 59.061 41.667 0.00 0.00 0.00 5.52
2486 2523 6.490566 AAGGGTTAAACAGTGTAATTAGCG 57.509 37.500 0.00 0.00 0.00 4.26
2487 2524 8.326680 TGTAAGGGTTAAACAGTGTAATTAGC 57.673 34.615 0.00 0.00 0.00 3.09
2490 2527 9.138596 ACAATGTAAGGGTTAAACAGTGTAATT 57.861 29.630 8.18 0.00 46.81 1.40
2491 2528 8.700439 ACAATGTAAGGGTTAAACAGTGTAAT 57.300 30.769 8.18 0.00 46.81 1.89
2493 2530 9.624373 TTTACAATGTAAGGGTTAAACAGTGTA 57.376 29.630 11.48 11.48 46.81 2.90
2495 2532 9.974980 ATTTTACAATGTAAGGGTTAAACAGTG 57.025 29.630 5.94 3.77 42.98 3.66
2501 2538 9.310449 TGCCTAATTTTACAATGTAAGGGTTAA 57.690 29.630 5.94 0.00 0.00 2.01
2502 2539 8.880991 TGCCTAATTTTACAATGTAAGGGTTA 57.119 30.769 5.94 6.42 0.00 2.85
2503 2540 7.784470 TGCCTAATTTTACAATGTAAGGGTT 57.216 32.000 5.94 5.69 0.00 4.11
2504 2541 7.784470 TTGCCTAATTTTACAATGTAAGGGT 57.216 32.000 5.94 0.00 0.00 4.34
2517 2554 9.995003 TGAACAAGATTGTAATTGCCTAATTTT 57.005 25.926 0.00 0.00 41.31 1.82
2518 2555 9.423061 GTGAACAAGATTGTAATTGCCTAATTT 57.577 29.630 0.00 0.00 41.31 1.82
2519 2556 8.584157 TGTGAACAAGATTGTAATTGCCTAATT 58.416 29.630 0.00 0.00 41.31 1.40
2520 2557 8.121305 TGTGAACAAGATTGTAATTGCCTAAT 57.879 30.769 0.00 0.00 41.31 1.73
2521 2558 7.446931 TCTGTGAACAAGATTGTAATTGCCTAA 59.553 33.333 0.00 0.00 41.31 2.69
2522 2559 6.939730 TCTGTGAACAAGATTGTAATTGCCTA 59.060 34.615 0.00 0.00 41.31 3.93
2523 2560 5.769662 TCTGTGAACAAGATTGTAATTGCCT 59.230 36.000 0.00 0.00 41.31 4.75
2524 2561 6.012658 TCTGTGAACAAGATTGTAATTGCC 57.987 37.500 0.00 0.00 41.31 4.52
2525 2562 6.902341 TCTCTGTGAACAAGATTGTAATTGC 58.098 36.000 0.00 0.00 41.31 3.56
2526 2563 8.092521 ACTCTCTGTGAACAAGATTGTAATTG 57.907 34.615 0.00 0.00 41.31 2.32
2527 2564 8.682936 AACTCTCTGTGAACAAGATTGTAATT 57.317 30.769 0.00 0.00 41.31 1.40
2528 2565 7.389053 GGAACTCTCTGTGAACAAGATTGTAAT 59.611 37.037 0.00 0.00 41.31 1.89
2529 2566 6.706270 GGAACTCTCTGTGAACAAGATTGTAA 59.294 38.462 0.00 0.00 41.31 2.41
2530 2567 6.183360 TGGAACTCTCTGTGAACAAGATTGTA 60.183 38.462 0.00 0.00 41.31 2.41
2531 2568 5.059833 GGAACTCTCTGTGAACAAGATTGT 58.940 41.667 0.00 0.00 44.72 2.71
2532 2569 5.059161 TGGAACTCTCTGTGAACAAGATTG 58.941 41.667 0.00 0.00 0.00 2.67
2533 2570 5.296151 TGGAACTCTCTGTGAACAAGATT 57.704 39.130 0.00 0.00 0.00 2.40
2534 2571 4.802248 GCTGGAACTCTCTGTGAACAAGAT 60.802 45.833 0.00 0.00 0.00 2.40
2535 2572 3.493350 GCTGGAACTCTCTGTGAACAAGA 60.493 47.826 0.00 0.00 0.00 3.02
2536 2573 2.805099 GCTGGAACTCTCTGTGAACAAG 59.195 50.000 0.00 0.00 0.00 3.16
2537 2574 2.485479 GGCTGGAACTCTCTGTGAACAA 60.485 50.000 0.00 0.00 0.00 2.83
2538 2575 1.070758 GGCTGGAACTCTCTGTGAACA 59.929 52.381 0.00 0.00 0.00 3.18
2539 2576 1.070758 TGGCTGGAACTCTCTGTGAAC 59.929 52.381 0.00 0.00 0.00 3.18
2540 2577 1.423584 TGGCTGGAACTCTCTGTGAA 58.576 50.000 0.00 0.00 0.00 3.18
2541 2578 1.649321 ATGGCTGGAACTCTCTGTGA 58.351 50.000 0.00 0.00 0.00 3.58
2542 2579 3.616956 TTATGGCTGGAACTCTCTGTG 57.383 47.619 0.00 0.00 0.00 3.66
2543 2580 4.202461 TGTTTTATGGCTGGAACTCTCTGT 60.202 41.667 0.00 0.00 0.00 3.41
2544 2581 4.154918 GTGTTTTATGGCTGGAACTCTCTG 59.845 45.833 0.00 0.00 0.00 3.35
2545 2582 4.202461 TGTGTTTTATGGCTGGAACTCTCT 60.202 41.667 0.00 0.00 0.00 3.10
2546 2583 4.072131 TGTGTTTTATGGCTGGAACTCTC 58.928 43.478 0.00 0.00 0.00 3.20
2547 2584 4.074970 CTGTGTTTTATGGCTGGAACTCT 58.925 43.478 0.00 0.00 0.00 3.24
2548 2585 3.821033 ACTGTGTTTTATGGCTGGAACTC 59.179 43.478 0.00 0.00 0.00 3.01
2549 2586 3.832527 ACTGTGTTTTATGGCTGGAACT 58.167 40.909 0.00 0.00 0.00 3.01
2550 2587 5.699097 TTACTGTGTTTTATGGCTGGAAC 57.301 39.130 0.00 0.00 0.00 3.62
2551 2588 6.909550 ATTTACTGTGTTTTATGGCTGGAA 57.090 33.333 0.00 0.00 0.00 3.53
2552 2589 6.491745 TCAATTTACTGTGTTTTATGGCTGGA 59.508 34.615 0.00 0.00 0.00 3.86
2553 2590 6.586082 GTCAATTTACTGTGTTTTATGGCTGG 59.414 38.462 0.00 0.00 0.00 4.85
2554 2591 7.144661 TGTCAATTTACTGTGTTTTATGGCTG 58.855 34.615 0.00 0.00 0.00 4.85
2555 2592 7.283625 TGTCAATTTACTGTGTTTTATGGCT 57.716 32.000 0.00 0.00 0.00 4.75
2556 2593 8.532977 AATGTCAATTTACTGTGTTTTATGGC 57.467 30.769 0.00 0.00 0.00 4.40
2561 2598 9.868277 TCTGAAAATGTCAATTTACTGTGTTTT 57.132 25.926 0.00 0.00 34.84 2.43
2583 2620 9.747898 ACCTTTACCACAAAATGTAATATCTGA 57.252 29.630 0.00 0.00 0.00 3.27
2588 2625 9.132923 TGTCAACCTTTACCACAAAATGTAATA 57.867 29.630 0.00 0.00 0.00 0.98
2589 2626 8.012957 TGTCAACCTTTACCACAAAATGTAAT 57.987 30.769 0.00 0.00 0.00 1.89
2590 2627 7.406031 TGTCAACCTTTACCACAAAATGTAA 57.594 32.000 0.00 0.00 0.00 2.41
2591 2628 7.589958 ATGTCAACCTTTACCACAAAATGTA 57.410 32.000 0.00 0.00 0.00 2.29
2592 2629 5.923733 TGTCAACCTTTACCACAAAATGT 57.076 34.783 0.00 0.00 0.00 2.71
2593 2630 7.784633 AAATGTCAACCTTTACCACAAAATG 57.215 32.000 0.00 0.00 0.00 2.32
2594 2631 8.919145 TCTAAATGTCAACCTTTACCACAAAAT 58.081 29.630 0.00 0.00 0.00 1.82
2595 2632 8.294954 TCTAAATGTCAACCTTTACCACAAAA 57.705 30.769 0.00 0.00 0.00 2.44
2596 2633 7.883391 TCTAAATGTCAACCTTTACCACAAA 57.117 32.000 0.00 0.00 0.00 2.83
2597 2634 9.005777 GTATCTAAATGTCAACCTTTACCACAA 57.994 33.333 0.00 0.00 0.00 3.33
2598 2635 8.158132 TGTATCTAAATGTCAACCTTTACCACA 58.842 33.333 0.00 0.00 0.00 4.17
2599 2636 8.556213 TGTATCTAAATGTCAACCTTTACCAC 57.444 34.615 0.00 0.00 0.00 4.16
2600 2637 8.598916 TCTGTATCTAAATGTCAACCTTTACCA 58.401 33.333 0.00 0.00 0.00 3.25
2601 2638 9.099454 CTCTGTATCTAAATGTCAACCTTTACC 57.901 37.037 0.00 0.00 0.00 2.85
2602 2639 9.871238 TCTCTGTATCTAAATGTCAACCTTTAC 57.129 33.333 0.00 0.00 0.00 2.01
2603 2640 9.871238 GTCTCTGTATCTAAATGTCAACCTTTA 57.129 33.333 0.00 0.00 0.00 1.85
2604 2641 8.598041 AGTCTCTGTATCTAAATGTCAACCTTT 58.402 33.333 0.00 0.00 0.00 3.11
2605 2642 8.140112 AGTCTCTGTATCTAAATGTCAACCTT 57.860 34.615 0.00 0.00 0.00 3.50
2606 2643 7.726033 AGTCTCTGTATCTAAATGTCAACCT 57.274 36.000 0.00 0.00 0.00 3.50
2607 2644 8.779354 AAAGTCTCTGTATCTAAATGTCAACC 57.221 34.615 0.00 0.00 0.00 3.77
2618 2655 9.678260 AAGAATGCAAATAAAGTCTCTGTATCT 57.322 29.630 0.00 0.00 0.00 1.98
2619 2656 9.713740 CAAGAATGCAAATAAAGTCTCTGTATC 57.286 33.333 0.00 0.00 0.00 2.24
2638 2675 5.404096 TGCAACATGTCAATAGCAAGAATG 58.596 37.500 0.00 0.00 0.00 2.67
2639 2676 5.416639 TCTGCAACATGTCAATAGCAAGAAT 59.583 36.000 0.00 0.00 0.00 2.40
2640 2677 4.761227 TCTGCAACATGTCAATAGCAAGAA 59.239 37.500 0.00 0.00 0.00 2.52
2641 2678 4.325972 TCTGCAACATGTCAATAGCAAGA 58.674 39.130 0.00 2.89 0.00 3.02
2642 2679 4.690184 TCTGCAACATGTCAATAGCAAG 57.310 40.909 0.00 0.79 0.00 4.01
2643 2680 5.882000 ACTATCTGCAACATGTCAATAGCAA 59.118 36.000 0.00 0.00 0.00 3.91
2644 2681 5.430886 ACTATCTGCAACATGTCAATAGCA 58.569 37.500 0.00 4.36 0.00 3.49
2645 2682 5.998454 ACTATCTGCAACATGTCAATAGC 57.002 39.130 0.00 0.00 0.00 2.97
2648 2685 9.182214 AGATTAAACTATCTGCAACATGTCAAT 57.818 29.630 0.00 0.00 33.68 2.57
2649 2686 8.453320 CAGATTAAACTATCTGCAACATGTCAA 58.547 33.333 0.00 0.00 43.49 3.18
2650 2687 7.977904 CAGATTAAACTATCTGCAACATGTCA 58.022 34.615 0.00 0.00 43.49 3.58
2661 2698 9.725019 TGAACATGTCAACAGATTAAACTATCT 57.275 29.630 0.00 0.00 32.15 1.98
2669 2706 9.474920 GGAAATTTTGAACATGTCAACAGATTA 57.525 29.630 0.00 0.00 46.09 1.75
2670 2707 7.986320 TGGAAATTTTGAACATGTCAACAGATT 59.014 29.630 0.00 3.95 46.09 2.40
2671 2708 7.499292 TGGAAATTTTGAACATGTCAACAGAT 58.501 30.769 0.00 0.00 46.09 2.90
2672 2709 6.871844 TGGAAATTTTGAACATGTCAACAGA 58.128 32.000 0.00 0.00 46.09 3.41
2673 2710 7.569297 CATGGAAATTTTGAACATGTCAACAG 58.431 34.615 0.00 0.00 46.09 3.16
2674 2711 6.018098 GCATGGAAATTTTGAACATGTCAACA 60.018 34.615 18.63 0.00 46.09 3.33
2675 2712 6.018098 TGCATGGAAATTTTGAACATGTCAAC 60.018 34.615 18.63 0.00 46.09 3.18
2676 2713 6.018098 GTGCATGGAAATTTTGAACATGTCAA 60.018 34.615 18.63 2.63 44.74 3.18
2677 2714 5.466058 GTGCATGGAAATTTTGAACATGTCA 59.534 36.000 18.63 15.56 40.63 3.58
2678 2715 5.466058 TGTGCATGGAAATTTTGAACATGTC 59.534 36.000 18.63 14.14 40.63 3.06
2679 2716 5.236911 GTGTGCATGGAAATTTTGAACATGT 59.763 36.000 18.63 0.00 40.63 3.21
2680 2717 5.236695 TGTGTGCATGGAAATTTTGAACATG 59.763 36.000 15.69 15.69 41.26 3.21
2681 2718 5.236911 GTGTGTGCATGGAAATTTTGAACAT 59.763 36.000 5.63 0.57 31.77 2.71
2682 2719 4.569966 GTGTGTGCATGGAAATTTTGAACA 59.430 37.500 0.00 0.00 0.00 3.18
2683 2720 4.569966 TGTGTGTGCATGGAAATTTTGAAC 59.430 37.500 0.00 0.00 0.00 3.18
2684 2721 4.763073 TGTGTGTGCATGGAAATTTTGAA 58.237 34.783 0.00 0.00 0.00 2.69
2685 2722 4.370049 CTGTGTGTGCATGGAAATTTTGA 58.630 39.130 0.00 0.00 0.00 2.69
2686 2723 3.495377 CCTGTGTGTGCATGGAAATTTTG 59.505 43.478 0.00 0.00 0.00 2.44
2687 2724 3.387374 TCCTGTGTGTGCATGGAAATTTT 59.613 39.130 0.00 0.00 30.91 1.82
2688 2725 2.964464 TCCTGTGTGTGCATGGAAATTT 59.036 40.909 0.00 0.00 30.91 1.82
2689 2726 2.596346 TCCTGTGTGTGCATGGAAATT 58.404 42.857 0.00 0.00 30.91 1.82
2690 2727 2.291209 TCCTGTGTGTGCATGGAAAT 57.709 45.000 0.00 0.00 30.91 2.17
2691 2728 2.064434 TTCCTGTGTGTGCATGGAAA 57.936 45.000 0.00 0.00 37.25 3.13
2692 2729 1.680735 GTTTCCTGTGTGTGCATGGAA 59.319 47.619 0.00 0.00 37.87 3.53
2693 2730 1.133823 AGTTTCCTGTGTGTGCATGGA 60.134 47.619 0.00 0.00 0.00 3.41
2694 2731 1.001048 CAGTTTCCTGTGTGTGCATGG 60.001 52.381 0.00 0.00 33.80 3.66
2695 2732 2.410785 CAGTTTCCTGTGTGTGCATG 57.589 50.000 0.00 0.00 33.80 4.06
2705 2742 1.171308 CATGAGCCCACAGTTTCCTG 58.829 55.000 0.00 0.00 44.68 3.86
2706 2743 0.773644 ACATGAGCCCACAGTTTCCT 59.226 50.000 0.00 0.00 0.00 3.36
2707 2744 1.270550 CAACATGAGCCCACAGTTTCC 59.729 52.381 0.00 0.00 0.00 3.13
2708 2745 2.030805 GTCAACATGAGCCCACAGTTTC 60.031 50.000 0.00 0.00 0.00 2.78
2709 2746 1.956477 GTCAACATGAGCCCACAGTTT 59.044 47.619 0.00 0.00 0.00 2.66
2710 2747 1.133823 TGTCAACATGAGCCCACAGTT 60.134 47.619 0.00 0.00 0.00 3.16
2711 2748 0.473755 TGTCAACATGAGCCCACAGT 59.526 50.000 0.00 0.00 0.00 3.55
2712 2749 1.608055 TTGTCAACATGAGCCCACAG 58.392 50.000 0.00 0.00 0.00 3.66
2713 2750 2.291209 ATTGTCAACATGAGCCCACA 57.709 45.000 0.00 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.