Multiple sequence alignment - TraesCS2D01G194500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G194500 chr2D 100.000 2583 0 0 1 2583 139744682 139747264 0.000000e+00 4771
1 TraesCS2D01G194500 chr2A 91.098 820 36 16 736 1529 161268499 161267691 0.000000e+00 1075
2 TraesCS2D01G194500 chr2A 85.164 519 49 16 1711 2217 161267676 161267174 8.250000e-140 507
3 TraesCS2D01G194500 chr2A 88.663 344 21 7 249 579 161268924 161268586 1.110000e-108 403
4 TraesCS2D01G194500 chr2B 84.184 784 73 37 760 1528 198535245 198534498 0.000000e+00 713
5 TraesCS2D01G194500 chr2B 81.046 459 50 17 1882 2310 198534400 198533949 5.330000e-87 331
6 TraesCS2D01G194500 chr6B 100.000 171 0 0 1540 1710 290230567 290230397 1.490000e-82 316
7 TraesCS2D01G194500 chr6A 100.000 169 0 0 1543 1711 616823898 616824066 1.930000e-81 313
8 TraesCS2D01G194500 chr7D 100.000 168 0 0 1544 1711 631665680 631665513 6.940000e-81 311
9 TraesCS2D01G194500 chr7D 84.862 218 28 5 2 216 392744379 392744594 5.600000e-52 215
10 TraesCS2D01G194500 chr5D 100.000 168 0 0 1543 1710 511954705 511954872 6.940000e-81 311
11 TraesCS2D01G194500 chr5B 92.661 218 12 2 1 216 684116936 684117151 6.940000e-81 311
12 TraesCS2D01G194500 chr5B 84.404 218 23 9 5 216 115376936 115376724 1.210000e-48 204
13 TraesCS2D01G194500 chr5A 93.023 215 12 2 3 216 47535825 47536037 6.940000e-81 311
14 TraesCS2D01G194500 chr5A 100.000 168 0 0 1543 1710 679782256 679782089 6.940000e-81 311
15 TraesCS2D01G194500 chr3D 100.000 168 0 0 1544 1711 77158686 77158519 6.940000e-81 311
16 TraesCS2D01G194500 chr3D 91.954 174 13 1 44 216 340725398 340725225 2.570000e-60 243
17 TraesCS2D01G194500 chr3A 100.000 168 0 0 1544 1711 720393539 720393372 6.940000e-81 311
18 TraesCS2D01G194500 chr1D 100.000 168 0 0 1543 1710 10337406 10337573 6.940000e-81 311
19 TraesCS2D01G194500 chr7B 98.837 172 1 1 1544 1715 685041775 685041605 3.230000e-79 305
20 TraesCS2D01G194500 chr4B 84.475 219 23 9 5 217 393408376 393408163 3.370000e-49 206
21 TraesCS2D01G194500 chr1A 83.945 218 30 5 1 216 486593460 486593674 1.210000e-48 204
22 TraesCS2D01G194500 chr1B 83.258 221 26 9 2 216 305305270 305305485 2.620000e-45 193
23 TraesCS2D01G194500 chr4A 83.028 218 30 5 1 216 36347791 36347579 9.430000e-45 191


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G194500 chr2D 139744682 139747264 2582 False 4771.000000 4771 100.000000 1 2583 1 chr2D.!!$F1 2582
1 TraesCS2D01G194500 chr2A 161267174 161268924 1750 True 661.666667 1075 88.308333 249 2217 3 chr2A.!!$R1 1968
2 TraesCS2D01G194500 chr2B 198533949 198535245 1296 True 522.000000 713 82.615000 760 2310 2 chr2B.!!$R1 1550

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
322 331 0.036765 TCATGTAGTGCGGGTGGTTC 60.037 55.0 0.0 0.0 0.0 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2042 2134 0.037975 TACGCGAACCAGGGTTTCTC 60.038 55.0 15.93 0.0 38.6 2.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.654939 CGCTAGAGTCTTCCGCAAC 58.345 57.895 0.00 0.00 0.00 4.17
19 20 0.109272 CGCTAGAGTCTTCCGCAACA 60.109 55.000 0.00 0.00 0.00 3.33
20 21 1.351153 GCTAGAGTCTTCCGCAACAC 58.649 55.000 0.00 0.00 0.00 3.32
21 22 1.618861 CTAGAGTCTTCCGCAACACG 58.381 55.000 0.00 0.00 43.15 4.49
37 38 3.327754 CGGCTACCGCGATTTCCG 61.328 66.667 8.23 11.67 41.17 4.30
38 39 2.202837 GGCTACCGCGATTTCCGT 60.203 61.111 8.23 0.00 41.15 4.69
39 40 1.812507 GGCTACCGCGATTTCCGTT 60.813 57.895 8.23 0.00 41.15 4.44
40 41 1.347221 GCTACCGCGATTTCCGTTG 59.653 57.895 8.23 0.00 41.15 4.10
41 42 1.356527 GCTACCGCGATTTCCGTTGT 61.357 55.000 8.23 0.00 41.15 3.32
42 43 0.643820 CTACCGCGATTTCCGTTGTC 59.356 55.000 8.23 0.00 41.15 3.18
43 44 1.072116 TACCGCGATTTCCGTTGTCG 61.072 55.000 8.23 0.00 41.15 4.35
44 45 2.377310 CCGCGATTTCCGTTGTCGT 61.377 57.895 8.23 0.00 41.15 4.34
45 46 1.489824 CGCGATTTCCGTTGTCGTT 59.510 52.632 0.00 0.00 41.15 3.85
46 47 0.784250 CGCGATTTCCGTTGTCGTTG 60.784 55.000 0.00 0.00 41.15 4.10
47 48 1.058057 GCGATTTCCGTTGTCGTTGC 61.058 55.000 0.00 0.00 41.15 4.17
48 49 0.452122 CGATTTCCGTTGTCGTTGCC 60.452 55.000 0.00 0.00 35.01 4.52
49 50 0.589223 GATTTCCGTTGTCGTTGCCA 59.411 50.000 0.00 0.00 35.01 4.92
50 51 1.002251 GATTTCCGTTGTCGTTGCCAA 60.002 47.619 0.00 0.00 35.01 4.52
51 52 0.378962 TTTCCGTTGTCGTTGCCAAG 59.621 50.000 0.00 0.00 35.01 3.61
52 53 0.462225 TTCCGTTGTCGTTGCCAAGA 60.462 50.000 0.00 0.00 35.01 3.02
53 54 0.250124 TCCGTTGTCGTTGCCAAGAT 60.250 50.000 0.00 0.00 35.01 2.40
54 55 0.165944 CCGTTGTCGTTGCCAAGATC 59.834 55.000 0.00 0.00 35.01 2.75
55 56 0.865111 CGTTGTCGTTGCCAAGATCA 59.135 50.000 0.00 0.00 0.00 2.92
56 57 1.262950 CGTTGTCGTTGCCAAGATCAA 59.737 47.619 0.00 0.00 0.00 2.57
57 58 2.286713 CGTTGTCGTTGCCAAGATCAAA 60.287 45.455 0.00 0.00 0.00 2.69
58 59 3.300009 GTTGTCGTTGCCAAGATCAAAG 58.700 45.455 0.00 0.00 0.00 2.77
59 60 2.844946 TGTCGTTGCCAAGATCAAAGA 58.155 42.857 0.00 0.00 31.42 2.52
60 61 2.807967 TGTCGTTGCCAAGATCAAAGAG 59.192 45.455 0.00 0.00 33.82 2.85
61 62 2.160417 GTCGTTGCCAAGATCAAAGAGG 59.840 50.000 0.00 0.00 33.82 3.69
62 63 2.038426 TCGTTGCCAAGATCAAAGAGGA 59.962 45.455 0.00 0.00 30.64 3.71
63 64 2.813754 CGTTGCCAAGATCAAAGAGGAA 59.186 45.455 0.00 0.00 0.00 3.36
64 65 3.120060 CGTTGCCAAGATCAAAGAGGAAG 60.120 47.826 0.00 0.00 0.00 3.46
65 66 2.440409 TGCCAAGATCAAAGAGGAAGC 58.560 47.619 0.00 0.00 0.00 3.86
66 67 1.747924 GCCAAGATCAAAGAGGAAGCC 59.252 52.381 0.00 0.00 0.00 4.35
67 68 2.620108 GCCAAGATCAAAGAGGAAGCCT 60.620 50.000 0.00 0.00 36.03 4.58
68 69 3.370953 GCCAAGATCAAAGAGGAAGCCTA 60.371 47.826 0.00 0.00 31.76 3.93
69 70 4.688321 GCCAAGATCAAAGAGGAAGCCTAT 60.688 45.833 0.00 0.00 31.76 2.57
70 71 5.062528 CCAAGATCAAAGAGGAAGCCTATC 58.937 45.833 0.00 0.00 31.76 2.08
71 72 5.163216 CCAAGATCAAAGAGGAAGCCTATCT 60.163 44.000 0.00 0.00 31.76 1.98
72 73 6.355747 CAAGATCAAAGAGGAAGCCTATCTT 58.644 40.000 0.00 0.00 35.53 2.40
73 74 6.573712 AGATCAAAGAGGAAGCCTATCTTT 57.426 37.500 0.00 0.00 42.49 2.52
76 77 3.941704 AAGAGGAAGCCTATCTTTGGG 57.058 47.619 0.00 0.00 34.56 4.12
81 82 3.425422 GCCTATCTTTGGGCGCTG 58.575 61.111 7.64 0.00 39.96 5.18
82 83 2.189499 GCCTATCTTTGGGCGCTGG 61.189 63.158 7.64 0.00 39.96 4.85
83 84 2.189499 CCTATCTTTGGGCGCTGGC 61.189 63.158 7.64 0.00 38.90 4.85
84 85 1.153086 CTATCTTTGGGCGCTGGCT 60.153 57.895 7.64 0.00 39.81 4.75
85 86 1.442526 CTATCTTTGGGCGCTGGCTG 61.443 60.000 7.64 0.00 39.81 4.85
86 87 2.891941 TATCTTTGGGCGCTGGCTGG 62.892 60.000 7.64 0.00 39.81 4.85
100 101 3.324930 CTGGAGCCAGGCACCTGA 61.325 66.667 26.57 8.50 46.30 3.86
101 102 3.324930 TGGAGCCAGGCACCTGAG 61.325 66.667 26.57 9.23 46.30 3.35
102 103 3.325753 GGAGCCAGGCACCTGAGT 61.326 66.667 20.27 4.39 46.30 3.41
103 104 1.990060 GGAGCCAGGCACCTGAGTA 60.990 63.158 20.27 0.00 46.30 2.59
104 105 1.219393 GAGCCAGGCACCTGAGTAC 59.781 63.158 18.44 4.78 46.30 2.73
105 106 1.229336 AGCCAGGCACCTGAGTACT 60.229 57.895 18.44 0.00 46.30 2.73
106 107 1.219393 GCCAGGCACCTGAGTACTC 59.781 63.158 18.44 16.32 46.30 2.59
107 108 1.261238 GCCAGGCACCTGAGTACTCT 61.261 60.000 23.01 0.58 46.30 3.24
108 109 1.960471 GCCAGGCACCTGAGTACTCTA 60.960 57.143 23.01 9.26 46.30 2.43
109 110 2.457598 CCAGGCACCTGAGTACTCTAA 58.542 52.381 23.01 3.60 46.30 2.10
110 111 3.034635 CCAGGCACCTGAGTACTCTAAT 58.965 50.000 23.01 6.03 46.30 1.73
111 112 3.181471 CCAGGCACCTGAGTACTCTAATG 60.181 52.174 23.01 17.47 46.30 1.90
112 113 3.449018 CAGGCACCTGAGTACTCTAATGT 59.551 47.826 23.01 11.80 46.30 2.71
113 114 3.702045 AGGCACCTGAGTACTCTAATGTC 59.298 47.826 23.01 17.86 0.00 3.06
114 115 3.489398 GGCACCTGAGTACTCTAATGTCG 60.489 52.174 23.01 7.04 0.00 4.35
115 116 3.696898 CACCTGAGTACTCTAATGTCGC 58.303 50.000 23.01 0.00 0.00 5.19
116 117 2.355132 ACCTGAGTACTCTAATGTCGCG 59.645 50.000 23.01 0.00 0.00 5.87
117 118 2.612672 CCTGAGTACTCTAATGTCGCGA 59.387 50.000 23.01 3.71 0.00 5.87
118 119 3.303461 CCTGAGTACTCTAATGTCGCGAG 60.303 52.174 23.01 8.26 0.00 5.03
119 120 3.528532 TGAGTACTCTAATGTCGCGAGA 58.471 45.455 23.01 9.54 38.16 4.04
120 121 3.556365 TGAGTACTCTAATGTCGCGAGAG 59.444 47.826 23.01 15.14 43.49 3.20
122 123 4.691175 AGTACTCTAATGTCGCGAGAGTA 58.309 43.478 23.47 23.47 46.30 2.59
124 125 3.533547 ACTCTAATGTCGCGAGAGTAGT 58.466 45.455 31.14 18.95 46.30 2.73
125 126 3.556775 ACTCTAATGTCGCGAGAGTAGTC 59.443 47.826 31.14 11.51 46.30 2.59
126 127 2.871022 TCTAATGTCGCGAGAGTAGTCC 59.129 50.000 31.14 10.82 43.49 3.85
127 128 1.752683 AATGTCGCGAGAGTAGTCCT 58.247 50.000 10.24 0.00 43.49 3.85
128 129 1.752683 ATGTCGCGAGAGTAGTCCTT 58.247 50.000 10.24 0.00 43.49 3.36
129 130 1.531423 TGTCGCGAGAGTAGTCCTTT 58.469 50.000 10.24 0.00 43.49 3.11
130 131 1.884579 TGTCGCGAGAGTAGTCCTTTT 59.115 47.619 10.24 0.00 43.49 2.27
131 132 2.095364 TGTCGCGAGAGTAGTCCTTTTC 60.095 50.000 10.24 0.00 43.49 2.29
132 133 2.162008 GTCGCGAGAGTAGTCCTTTTCT 59.838 50.000 10.24 0.00 43.49 2.52
133 134 2.818432 TCGCGAGAGTAGTCCTTTTCTT 59.182 45.455 3.71 0.00 34.84 2.52
134 135 3.255149 TCGCGAGAGTAGTCCTTTTCTTT 59.745 43.478 3.71 0.00 34.84 2.52
135 136 3.988517 CGCGAGAGTAGTCCTTTTCTTTT 59.011 43.478 0.00 0.00 0.00 2.27
136 137 4.448060 CGCGAGAGTAGTCCTTTTCTTTTT 59.552 41.667 0.00 0.00 0.00 1.94
161 162 3.620929 CGCTCTACGGCTTATGTCTAA 57.379 47.619 0.00 0.00 38.44 2.10
162 163 3.961182 CGCTCTACGGCTTATGTCTAAA 58.039 45.455 0.00 0.00 38.44 1.85
163 164 3.729716 CGCTCTACGGCTTATGTCTAAAC 59.270 47.826 0.00 0.00 38.44 2.01
164 165 4.049869 GCTCTACGGCTTATGTCTAAACC 58.950 47.826 0.00 0.00 0.00 3.27
165 166 4.202131 GCTCTACGGCTTATGTCTAAACCT 60.202 45.833 0.00 0.00 0.00 3.50
166 167 5.681695 GCTCTACGGCTTATGTCTAAACCTT 60.682 44.000 0.00 0.00 0.00 3.50
167 168 5.899299 TCTACGGCTTATGTCTAAACCTTC 58.101 41.667 0.00 0.00 0.00 3.46
168 169 4.820894 ACGGCTTATGTCTAAACCTTCT 57.179 40.909 0.00 0.00 0.00 2.85
169 170 5.161943 ACGGCTTATGTCTAAACCTTCTT 57.838 39.130 0.00 0.00 0.00 2.52
170 171 5.176592 ACGGCTTATGTCTAAACCTTCTTC 58.823 41.667 0.00 0.00 0.00 2.87
171 172 5.046520 ACGGCTTATGTCTAAACCTTCTTCT 60.047 40.000 0.00 0.00 0.00 2.85
172 173 5.875359 CGGCTTATGTCTAAACCTTCTTCTT 59.125 40.000 0.00 0.00 0.00 2.52
173 174 7.039882 CGGCTTATGTCTAAACCTTCTTCTTA 58.960 38.462 0.00 0.00 0.00 2.10
174 175 7.548075 CGGCTTATGTCTAAACCTTCTTCTTAA 59.452 37.037 0.00 0.00 0.00 1.85
175 176 9.397280 GGCTTATGTCTAAACCTTCTTCTTAAT 57.603 33.333 0.00 0.00 0.00 1.40
200 201 6.849588 AATGAAAATGACAAGTCTTTTGCC 57.150 33.333 12.85 9.55 37.14 4.52
201 202 5.596836 TGAAAATGACAAGTCTTTTGCCT 57.403 34.783 12.85 1.01 37.14 4.75
202 203 6.707440 TGAAAATGACAAGTCTTTTGCCTA 57.293 33.333 12.85 0.00 37.14 3.93
203 204 6.738114 TGAAAATGACAAGTCTTTTGCCTAG 58.262 36.000 12.85 0.00 37.14 3.02
204 205 6.321181 TGAAAATGACAAGTCTTTTGCCTAGT 59.679 34.615 12.85 0.00 37.14 2.57
205 206 6.715347 AAATGACAAGTCTTTTGCCTAGTT 57.285 33.333 11.74 0.00 36.16 2.24
206 207 6.715347 AATGACAAGTCTTTTGCCTAGTTT 57.285 33.333 1.53 0.00 0.00 2.66
207 208 7.817418 AATGACAAGTCTTTTGCCTAGTTTA 57.183 32.000 1.53 0.00 0.00 2.01
208 209 7.817418 ATGACAAGTCTTTTGCCTAGTTTAA 57.183 32.000 1.53 0.00 0.00 1.52
209 210 7.633193 TGACAAGTCTTTTGCCTAGTTTAAA 57.367 32.000 1.53 0.00 0.00 1.52
210 211 8.057536 TGACAAGTCTTTTGCCTAGTTTAAAA 57.942 30.769 1.53 0.00 0.00 1.52
211 212 8.524487 TGACAAGTCTTTTGCCTAGTTTAAAAA 58.476 29.630 1.53 0.00 0.00 1.94
230 231 2.378507 AAAAAGTAACGCTGTGACGC 57.621 45.000 0.00 0.00 36.19 5.19
231 232 0.584876 AAAAGTAACGCTGTGACGCC 59.415 50.000 0.00 0.00 36.19 5.68
232 233 0.531090 AAAGTAACGCTGTGACGCCA 60.531 50.000 0.00 0.00 36.19 5.69
233 234 0.944311 AAGTAACGCTGTGACGCCAG 60.944 55.000 0.00 0.00 36.19 4.85
234 235 2.048597 TAACGCTGTGACGCCAGG 60.049 61.111 0.00 0.00 36.19 4.45
247 248 2.360852 CCAGGCAGGCTTCCAGTG 60.361 66.667 5.84 0.00 0.00 3.66
285 286 1.222115 ACCGTGCTTTTCGCTGAGAC 61.222 55.000 0.00 0.00 40.11 3.36
290 291 1.526887 TGCTTTTCGCTGAGACTTTCG 59.473 47.619 0.00 0.00 40.11 3.46
291 292 1.527311 GCTTTTCGCTGAGACTTTCGT 59.473 47.619 0.00 0.00 35.14 3.85
314 323 5.922739 TTATTTATGGCTCATGTAGTGCG 57.077 39.130 0.00 0.00 37.60 5.34
315 324 2.238942 TTATGGCTCATGTAGTGCGG 57.761 50.000 0.00 0.00 37.60 5.69
322 331 0.036765 TCATGTAGTGCGGGTGGTTC 60.037 55.000 0.00 0.00 0.00 3.62
349 358 5.066505 GTGGTCCGATATTTTCTGCAGAATT 59.933 40.000 28.89 20.81 33.54 2.17
366 375 1.915141 ATTGACAGTGGGAAAGCAGG 58.085 50.000 0.00 0.00 0.00 4.85
389 403 3.423776 CGAGCGGATAGAATCTACGTGAG 60.424 52.174 0.00 0.00 0.00 3.51
394 408 4.750598 CGGATAGAATCTACGTGAGTCTCA 59.249 45.833 17.07 0.00 45.72 3.27
408 422 2.202544 CTCAGAGCGTCGCACCTC 60.203 66.667 21.09 8.48 0.00 3.85
409 423 4.103103 TCAGAGCGTCGCACCTCG 62.103 66.667 21.09 10.39 40.15 4.63
426 440 1.736645 CGGATCCTTGAACGCACGT 60.737 57.895 10.75 0.00 0.00 4.49
456 470 1.734465 GCAGTTGGTCTCATCGGAAAG 59.266 52.381 0.00 0.00 0.00 2.62
476 490 1.821666 GCAGCCAGGGAAGGTTTAACA 60.822 52.381 0.00 0.00 0.00 2.41
500 514 4.039603 AGAGGGAAGGTCAAAAGAATGG 57.960 45.455 0.00 0.00 0.00 3.16
513 527 4.476628 AAAGAATGGCCATGATTTGACC 57.523 40.909 21.63 1.54 0.00 4.02
529 543 1.829222 TGACCAGGTTCTTCCGGATAC 59.171 52.381 4.15 3.98 41.99 2.24
543 557 2.666836 GGATACGAGTGAGCGTCTAC 57.333 55.000 0.00 0.00 44.39 2.59
544 558 1.938577 GGATACGAGTGAGCGTCTACA 59.061 52.381 0.00 0.00 44.39 2.74
545 559 2.353889 GGATACGAGTGAGCGTCTACAA 59.646 50.000 0.00 0.00 44.39 2.41
560 574 6.594159 AGCGTCTACAATACAATTTTGCTAGT 59.406 34.615 0.00 0.00 0.00 2.57
579 593 2.161211 AGTTCGCTGACGTAACCTAGTC 59.839 50.000 0.00 0.00 41.18 2.59
580 594 1.089920 TCGCTGACGTAACCTAGTCC 58.910 55.000 0.00 0.00 41.18 3.85
581 595 0.100146 CGCTGACGTAACCTAGTCCC 59.900 60.000 0.00 0.00 36.61 4.46
582 596 1.180029 GCTGACGTAACCTAGTCCCA 58.820 55.000 0.00 0.00 36.61 4.37
583 597 1.755380 GCTGACGTAACCTAGTCCCAT 59.245 52.381 0.00 0.00 36.61 4.00
584 598 2.167900 GCTGACGTAACCTAGTCCCATT 59.832 50.000 0.00 0.00 36.61 3.16
585 599 3.369157 GCTGACGTAACCTAGTCCCATTT 60.369 47.826 0.00 0.00 36.61 2.32
586 600 4.828829 CTGACGTAACCTAGTCCCATTTT 58.171 43.478 0.00 0.00 36.61 1.82
587 601 4.571919 TGACGTAACCTAGTCCCATTTTG 58.428 43.478 0.00 0.00 36.61 2.44
588 602 3.340928 ACGTAACCTAGTCCCATTTTGC 58.659 45.455 0.00 0.00 0.00 3.68
589 603 3.008704 ACGTAACCTAGTCCCATTTTGCT 59.991 43.478 0.00 0.00 0.00 3.91
590 604 4.007659 CGTAACCTAGTCCCATTTTGCTT 58.992 43.478 0.00 0.00 0.00 3.91
591 605 4.457949 CGTAACCTAGTCCCATTTTGCTTT 59.542 41.667 0.00 0.00 0.00 3.51
592 606 5.391629 CGTAACCTAGTCCCATTTTGCTTTC 60.392 44.000 0.00 0.00 0.00 2.62
593 607 3.081804 ACCTAGTCCCATTTTGCTTTCG 58.918 45.455 0.00 0.00 0.00 3.46
594 608 3.081804 CCTAGTCCCATTTTGCTTTCGT 58.918 45.455 0.00 0.00 0.00 3.85
595 609 3.119849 CCTAGTCCCATTTTGCTTTCGTG 60.120 47.826 0.00 0.00 0.00 4.35
596 610 2.582052 AGTCCCATTTTGCTTTCGTGA 58.418 42.857 0.00 0.00 0.00 4.35
597 611 3.157087 AGTCCCATTTTGCTTTCGTGAT 58.843 40.909 0.00 0.00 0.00 3.06
598 612 3.191371 AGTCCCATTTTGCTTTCGTGATC 59.809 43.478 0.00 0.00 0.00 2.92
599 613 3.057596 GTCCCATTTTGCTTTCGTGATCA 60.058 43.478 0.00 0.00 0.00 2.92
600 614 3.571828 TCCCATTTTGCTTTCGTGATCAA 59.428 39.130 0.00 0.00 0.00 2.57
601 615 4.220382 TCCCATTTTGCTTTCGTGATCAAT 59.780 37.500 0.00 0.00 0.00 2.57
602 616 4.563976 CCCATTTTGCTTTCGTGATCAATC 59.436 41.667 0.00 0.00 0.00 2.67
603 617 5.162794 CCATTTTGCTTTCGTGATCAATCA 58.837 37.500 0.00 0.00 0.00 2.57
604 618 5.634439 CCATTTTGCTTTCGTGATCAATCAA 59.366 36.000 0.00 0.00 38.75 2.57
605 619 6.145858 CCATTTTGCTTTCGTGATCAATCAAA 59.854 34.615 0.00 0.00 38.75 2.69
606 620 7.148540 CCATTTTGCTTTCGTGATCAATCAAAT 60.149 33.333 0.00 0.00 38.75 2.32
607 621 6.693761 TTTGCTTTCGTGATCAATCAAATG 57.306 33.333 0.00 0.00 38.75 2.32
608 622 5.625921 TGCTTTCGTGATCAATCAAATGA 57.374 34.783 0.00 0.00 38.75 2.57
609 623 6.198650 TGCTTTCGTGATCAATCAAATGAT 57.801 33.333 0.00 0.00 42.62 2.45
610 624 6.623486 TGCTTTCGTGATCAATCAAATGATT 58.377 32.000 0.00 2.83 44.93 2.57
611 625 7.760437 TGCTTTCGTGATCAATCAAATGATTA 58.240 30.769 8.24 0.00 42.41 1.75
612 626 8.242739 TGCTTTCGTGATCAATCAAATGATTAA 58.757 29.630 8.24 0.00 42.41 1.40
613 627 8.526681 GCTTTCGTGATCAATCAAATGATTAAC 58.473 33.333 8.24 4.90 42.41 2.01
614 628 8.599876 TTTCGTGATCAATCAAATGATTAACG 57.400 30.769 8.24 14.13 42.41 3.18
615 629 7.532682 TCGTGATCAATCAAATGATTAACGA 57.467 32.000 19.92 19.92 45.95 3.85
616 630 8.141835 TCGTGATCAATCAAATGATTAACGAT 57.858 30.769 19.92 14.34 44.79 3.73
617 631 8.063630 TCGTGATCAATCAAATGATTAACGATG 58.936 33.333 19.92 7.41 44.79 3.84
620 634 8.562052 TGATCAATCAAATGATTAACGATGGAG 58.438 33.333 8.24 0.00 42.41 3.86
634 648 4.246458 ACGATGGAGAACAGAAGCTTTAC 58.754 43.478 0.00 0.00 0.00 2.01
635 649 3.304559 CGATGGAGAACAGAAGCTTTACG 59.695 47.826 0.00 0.00 0.00 3.18
655 673 2.608506 CGTCGGTCCAACATAGACAACA 60.609 50.000 0.00 0.00 35.89 3.33
658 676 3.070446 TCGGTCCAACATAGACAACAACT 59.930 43.478 0.00 0.00 35.89 3.16
659 677 4.281435 TCGGTCCAACATAGACAACAACTA 59.719 41.667 0.00 0.00 35.89 2.24
660 678 4.387862 CGGTCCAACATAGACAACAACTAC 59.612 45.833 0.00 0.00 35.89 2.73
664 682 3.604875 ACATAGACAACAACTACCCCG 57.395 47.619 0.00 0.00 0.00 5.73
665 683 2.901839 ACATAGACAACAACTACCCCGT 59.098 45.455 0.00 0.00 0.00 5.28
666 684 4.088634 ACATAGACAACAACTACCCCGTA 58.911 43.478 0.00 0.00 0.00 4.02
667 685 4.082026 ACATAGACAACAACTACCCCGTAC 60.082 45.833 0.00 0.00 0.00 3.67
668 686 2.318908 AGACAACAACTACCCCGTACA 58.681 47.619 0.00 0.00 0.00 2.90
669 687 2.699846 AGACAACAACTACCCCGTACAA 59.300 45.455 0.00 0.00 0.00 2.41
670 688 3.062042 GACAACAACTACCCCGTACAAG 58.938 50.000 0.00 0.00 0.00 3.16
671 689 2.224354 ACAACAACTACCCCGTACAAGG 60.224 50.000 0.00 0.00 0.00 3.61
672 690 0.322648 ACAACTACCCCGTACAAGGC 59.677 55.000 0.00 0.00 0.00 4.35
674 692 1.058284 AACTACCCCGTACAAGGCAA 58.942 50.000 0.00 0.00 0.00 4.52
675 693 0.611714 ACTACCCCGTACAAGGCAAG 59.388 55.000 0.00 0.00 0.00 4.01
679 697 1.555477 CCCCGTACAAGGCAAGGGTA 61.555 60.000 0.00 0.00 40.44 3.69
680 698 0.325602 CCCGTACAAGGCAAGGGTAA 59.674 55.000 0.00 0.00 37.36 2.85
682 700 1.677820 CCGTACAAGGCAAGGGTAAGG 60.678 57.143 0.00 0.00 31.99 2.69
683 701 1.677820 CGTACAAGGCAAGGGTAAGGG 60.678 57.143 0.00 0.00 0.00 3.95
684 702 1.353358 GTACAAGGCAAGGGTAAGGGT 59.647 52.381 0.00 0.00 0.00 4.34
686 704 0.404040 CAAGGCAAGGGTAAGGGTCA 59.596 55.000 0.00 0.00 0.00 4.02
688 706 1.154430 AGGCAAGGGTAAGGGTCAAA 58.846 50.000 0.00 0.00 0.00 2.69
690 708 1.616865 GGCAAGGGTAAGGGTCAAAAC 59.383 52.381 0.00 0.00 0.00 2.43
691 709 2.312390 GCAAGGGTAAGGGTCAAAACA 58.688 47.619 0.00 0.00 0.00 2.83
693 711 3.827722 CAAGGGTAAGGGTCAAAACAGA 58.172 45.455 0.00 0.00 0.00 3.41
694 712 3.790089 AGGGTAAGGGTCAAAACAGAG 57.210 47.619 0.00 0.00 0.00 3.35
695 713 2.160205 GGGTAAGGGTCAAAACAGAGC 58.840 52.381 0.00 0.00 35.36 4.09
696 714 2.224793 GGGTAAGGGTCAAAACAGAGCT 60.225 50.000 0.00 0.00 36.33 4.09
697 715 2.814336 GGTAAGGGTCAAAACAGAGCTG 59.186 50.000 0.00 0.00 36.33 4.24
698 716 1.322442 AAGGGTCAAAACAGAGCTGC 58.678 50.000 0.00 0.00 36.33 5.25
699 717 0.886490 AGGGTCAAAACAGAGCTGCG 60.886 55.000 0.00 0.00 36.33 5.18
700 718 0.884704 GGGTCAAAACAGAGCTGCGA 60.885 55.000 0.00 0.00 36.33 5.10
701 719 0.235926 GGTCAAAACAGAGCTGCGAC 59.764 55.000 0.00 0.31 33.41 5.19
702 720 0.235926 GTCAAAACAGAGCTGCGACC 59.764 55.000 0.00 0.00 0.00 4.79
703 721 0.884704 TCAAAACAGAGCTGCGACCC 60.885 55.000 0.00 0.00 0.00 4.46
704 722 1.600916 AAAACAGAGCTGCGACCCC 60.601 57.895 0.00 0.00 0.00 4.95
705 723 2.056906 AAAACAGAGCTGCGACCCCT 62.057 55.000 0.00 0.00 0.00 4.79
706 724 2.456287 AAACAGAGCTGCGACCCCTC 62.456 60.000 0.00 0.00 0.00 4.30
707 725 3.073735 CAGAGCTGCGACCCCTCT 61.074 66.667 0.00 0.00 36.43 3.69
708 726 2.757917 AGAGCTGCGACCCCTCTC 60.758 66.667 0.00 0.00 30.46 3.20
709 727 2.757917 GAGCTGCGACCCCTCTCT 60.758 66.667 0.00 0.00 0.00 3.10
710 728 2.757917 AGCTGCGACCCCTCTCTC 60.758 66.667 0.00 0.00 0.00 3.20
711 729 3.844090 GCTGCGACCCCTCTCTCC 61.844 72.222 0.00 0.00 0.00 3.71
712 730 2.043450 CTGCGACCCCTCTCTCCT 60.043 66.667 0.00 0.00 0.00 3.69
713 731 2.043852 TGCGACCCCTCTCTCCTC 60.044 66.667 0.00 0.00 0.00 3.71
714 732 2.835895 GCGACCCCTCTCTCCTCC 60.836 72.222 0.00 0.00 0.00 4.30
715 733 2.517402 CGACCCCTCTCTCCTCCG 60.517 72.222 0.00 0.00 0.00 4.63
716 734 2.835895 GACCCCTCTCTCCTCCGC 60.836 72.222 0.00 0.00 0.00 5.54
717 735 4.467107 ACCCCTCTCTCCTCCGCC 62.467 72.222 0.00 0.00 0.00 6.13
728 746 4.680237 CTCCGCCCGCAGTTGACA 62.680 66.667 0.00 0.00 0.00 3.58
729 747 4.680237 TCCGCCCGCAGTTGACAG 62.680 66.667 0.00 0.00 0.00 3.51
730 748 4.988598 CCGCCCGCAGTTGACAGT 62.989 66.667 0.00 0.00 0.00 3.55
731 749 2.972505 CGCCCGCAGTTGACAGTT 60.973 61.111 0.00 0.00 0.00 3.16
732 750 2.946762 GCCCGCAGTTGACAGTTC 59.053 61.111 0.00 0.00 0.00 3.01
733 751 2.617274 GCCCGCAGTTGACAGTTCC 61.617 63.158 0.00 0.00 0.00 3.62
734 752 1.227823 CCCGCAGTTGACAGTTCCA 60.228 57.895 0.00 0.00 0.00 3.53
847 868 1.354337 CCATTCAGCACGACGAGGTG 61.354 60.000 16.78 16.78 40.89 4.00
903 924 3.552384 AGTCAAACGCCCACCGGA 61.552 61.111 9.46 0.00 42.52 5.14
1063 1092 9.899226 GCTAACAACAAGTTCAAAAGAGAATAT 57.101 29.630 0.00 0.00 41.64 1.28
1105 1134 4.792521 CGGAGGAAGAAGAAGAAGAAGA 57.207 45.455 0.00 0.00 0.00 2.87
1106 1135 5.140747 CGGAGGAAGAAGAAGAAGAAGAA 57.859 43.478 0.00 0.00 0.00 2.52
1107 1136 5.167845 CGGAGGAAGAAGAAGAAGAAGAAG 58.832 45.833 0.00 0.00 0.00 2.85
1108 1137 5.047660 CGGAGGAAGAAGAAGAAGAAGAAGA 60.048 44.000 0.00 0.00 0.00 2.87
1109 1138 6.398095 GGAGGAAGAAGAAGAAGAAGAAGAG 58.602 44.000 0.00 0.00 0.00 2.85
1110 1139 6.358974 AGGAAGAAGAAGAAGAAGAAGAGG 57.641 41.667 0.00 0.00 0.00 3.69
1111 1140 5.248248 AGGAAGAAGAAGAAGAAGAAGAGGG 59.752 44.000 0.00 0.00 0.00 4.30
1112 1141 5.247337 GGAAGAAGAAGAAGAAGAAGAGGGA 59.753 44.000 0.00 0.00 0.00 4.20
1113 1142 6.358974 AAGAAGAAGAAGAAGAAGAGGGAG 57.641 41.667 0.00 0.00 0.00 4.30
1114 1143 4.222810 AGAAGAAGAAGAAGAAGAGGGAGC 59.777 45.833 0.00 0.00 0.00 4.70
1128 1157 1.153229 GGAGCGGGTGGTGGTATTC 60.153 63.158 0.00 0.00 0.00 1.75
1188 1227 1.880340 CGATCAGGAAGAGCCACGC 60.880 63.158 0.00 0.00 40.02 5.34
1435 1493 2.010145 AATGAGCACGTACGCTTCAT 57.990 45.000 16.72 17.77 44.01 2.57
1451 1509 1.896220 TCATGTCTCAAGGCGCTTTT 58.104 45.000 7.64 0.00 0.00 2.27
1532 1599 0.243636 GCAAAGGGATTTCGTGTGGG 59.756 55.000 0.00 0.00 0.00 4.61
1542 1609 2.709125 TTCGTGTGGGGAGCGTCAAG 62.709 60.000 0.00 0.00 0.00 3.02
1567 1634 2.690326 CGTAGCCAGCCCAATACAC 58.310 57.895 0.00 0.00 0.00 2.90
1568 1635 0.814010 CGTAGCCAGCCCAATACACC 60.814 60.000 0.00 0.00 0.00 4.16
1569 1636 0.254747 GTAGCCAGCCCAATACACCA 59.745 55.000 0.00 0.00 0.00 4.17
1570 1637 0.546122 TAGCCAGCCCAATACACCAG 59.454 55.000 0.00 0.00 0.00 4.00
1571 1638 1.754234 GCCAGCCCAATACACCAGG 60.754 63.158 0.00 0.00 0.00 4.45
1572 1639 1.076777 CCAGCCCAATACACCAGGG 60.077 63.158 0.00 0.00 45.68 4.45
1573 1640 1.691219 CAGCCCAATACACCAGGGT 59.309 57.895 0.00 0.00 44.69 4.34
1590 1657 6.806668 CCAGGGTGGTCCATTAATAAAAAT 57.193 37.500 0.00 0.00 38.24 1.82
1591 1658 7.906199 CCAGGGTGGTCCATTAATAAAAATA 57.094 36.000 0.00 0.00 38.24 1.40
1592 1659 8.491045 CCAGGGTGGTCCATTAATAAAAATAT 57.509 34.615 0.00 0.00 38.24 1.28
1593 1660 8.933653 CCAGGGTGGTCCATTAATAAAAATATT 58.066 33.333 0.00 0.00 38.24 1.28
1657 1724 8.911018 ACTACATTATATACAAGCTATGGGGA 57.089 34.615 0.00 0.00 0.00 4.81
1658 1725 9.333961 ACTACATTATATACAAGCTATGGGGAA 57.666 33.333 0.00 0.00 0.00 3.97
1663 1730 9.700831 ATTATATACAAGCTATGGGGAAATTCC 57.299 33.333 2.79 2.79 35.23 3.01
1664 1731 3.756082 ACAAGCTATGGGGAAATTCCA 57.244 42.857 14.68 0.00 38.64 3.53
1665 1732 3.635591 ACAAGCTATGGGGAAATTCCAG 58.364 45.455 14.68 3.58 38.64 3.86
1666 1733 2.961062 CAAGCTATGGGGAAATTCCAGG 59.039 50.000 14.68 0.12 38.64 4.45
1667 1734 1.500736 AGCTATGGGGAAATTCCAGGG 59.499 52.381 14.68 0.46 38.64 4.45
1668 1735 1.217942 GCTATGGGGAAATTCCAGGGT 59.782 52.381 14.68 0.00 38.64 4.34
1669 1736 2.949447 CTATGGGGAAATTCCAGGGTG 58.051 52.381 14.68 0.00 38.64 4.61
1670 1737 0.339510 ATGGGGAAATTCCAGGGTGG 59.660 55.000 14.68 0.00 38.64 4.61
1671 1738 1.077298 TGGGGAAATTCCAGGGTGGT 61.077 55.000 14.68 0.00 38.64 4.16
1672 1739 0.324368 GGGGAAATTCCAGGGTGGTC 60.324 60.000 14.68 0.00 38.64 4.02
1673 1740 0.324368 GGGAAATTCCAGGGTGGTCC 60.324 60.000 14.68 0.00 38.64 4.46
1674 1741 0.407918 GGAAATTCCAGGGTGGTCCA 59.592 55.000 7.23 0.00 39.03 4.02
1675 1742 1.007118 GGAAATTCCAGGGTGGTCCAT 59.993 52.381 7.23 0.00 39.03 3.41
1676 1743 2.102578 GAAATTCCAGGGTGGTCCATG 58.897 52.381 0.00 0.00 44.12 3.66
1688 1755 3.338250 TCCATGGACCACCCTGGC 61.338 66.667 11.44 0.00 46.80 4.85
1689 1756 4.447342 CCATGGACCACCCTGGCC 62.447 72.222 5.56 0.00 43.04 5.36
1690 1757 3.660571 CATGGACCACCCTGGCCA 61.661 66.667 4.71 4.71 43.97 5.36
1691 1758 3.661648 ATGGACCACCCTGGCCAC 61.662 66.667 0.00 0.00 43.14 5.01
1698 1765 4.760220 ACCCTGGCCACCCCCTAG 62.760 72.222 0.00 0.00 0.00 3.02
1701 1768 2.040884 CTGGCCACCCCCTAGCTA 60.041 66.667 0.00 0.00 0.00 3.32
1702 1769 2.366435 TGGCCACCCCCTAGCTAC 60.366 66.667 0.00 0.00 0.00 3.58
1703 1770 3.547513 GGCCACCCCCTAGCTACG 61.548 72.222 0.00 0.00 0.00 3.51
1704 1771 4.237207 GCCACCCCCTAGCTACGC 62.237 72.222 0.00 0.00 0.00 4.42
1705 1772 3.547513 CCACCCCCTAGCTACGCC 61.548 72.222 0.00 0.00 0.00 5.68
1706 1773 2.762459 CACCCCCTAGCTACGCCA 60.762 66.667 0.00 0.00 0.00 5.69
1707 1774 2.762875 ACCCCCTAGCTACGCCAC 60.763 66.667 0.00 0.00 0.00 5.01
1708 1775 2.444140 CCCCCTAGCTACGCCACT 60.444 66.667 0.00 0.00 0.00 4.00
1709 1776 2.797278 CCCCCTAGCTACGCCACTG 61.797 68.421 0.00 0.00 0.00 3.66
1710 1777 2.797278 CCCCTAGCTACGCCACTGG 61.797 68.421 0.00 0.00 0.00 4.00
1711 1778 2.107141 CCTAGCTACGCCACTGGC 59.893 66.667 10.35 10.35 46.75 4.85
1735 1802 1.152963 GGGGCGCCTTGACATACAT 60.153 57.895 28.56 0.00 0.00 2.29
1736 1803 0.751643 GGGGCGCCTTGACATACATT 60.752 55.000 28.56 0.00 0.00 2.71
1738 1805 1.202290 GGGCGCCTTGACATACATTTG 60.202 52.381 28.56 0.00 0.00 2.32
1740 1807 2.477863 GGCGCCTTGACATACATTTGTC 60.478 50.000 22.15 0.00 45.05 3.18
1770 1839 3.435105 TGCTTTTCAGTGCGTTCAAAT 57.565 38.095 0.00 0.00 0.00 2.32
1837 1908 0.605319 TTGGTGATCCAGCGGTCAAC 60.605 55.000 0.00 7.63 45.22 3.18
1839 1910 1.745489 GTGATCCAGCGGTCAACCC 60.745 63.158 0.00 0.00 0.00 4.11
1848 1919 3.263941 GGTCAACCCGTGATGTGC 58.736 61.111 0.00 0.00 38.90 4.57
1849 1920 1.599518 GGTCAACCCGTGATGTGCA 60.600 57.895 0.00 0.00 38.90 4.57
1850 1921 1.577328 GGTCAACCCGTGATGTGCAG 61.577 60.000 0.00 0.00 38.90 4.41
1851 1922 1.302431 TCAACCCGTGATGTGCAGG 60.302 57.895 0.00 0.00 0.00 4.85
1852 1923 1.302431 CAACCCGTGATGTGCAGGA 60.302 57.895 0.00 0.00 34.35 3.86
1899 1970 4.824166 GCACCTCGCGCATGCAAG 62.824 66.667 19.57 10.84 42.97 4.01
1900 1971 4.824166 CACCTCGCGCATGCAAGC 62.824 66.667 19.57 13.02 42.97 4.01
1902 1973 4.233635 CCTCGCGCATGCAAGCTC 62.234 66.667 19.57 2.66 42.97 4.09
1903 1974 3.193614 CTCGCGCATGCAAGCTCT 61.194 61.111 19.57 0.00 42.97 4.09
1930 2001 2.398498 CTCATCTCTCGCATTTACCGG 58.602 52.381 0.00 0.00 0.00 5.28
1946 2017 2.671177 CGGCGTTGCTGGTCAGAAG 61.671 63.158 0.00 0.00 0.00 2.85
1954 2025 2.997980 TGCTGGTCAGAAGTCAAACAA 58.002 42.857 1.65 0.00 0.00 2.83
1962 2033 6.262273 TGGTCAGAAGTCAAACAAAGTTATCC 59.738 38.462 0.00 0.00 0.00 2.59
1963 2034 6.294010 GGTCAGAAGTCAAACAAAGTTATCCC 60.294 42.308 0.00 0.00 0.00 3.85
1976 2055 0.907704 TTATCCCGGACACTGCAGGT 60.908 55.000 19.93 13.09 0.00 4.00
2042 2134 3.471680 GGATCGATCCTTCTTTTCCTGG 58.528 50.000 32.91 0.00 43.73 4.45
2053 2145 2.108250 TCTTTTCCTGGAGAAACCCTGG 59.892 50.000 1.01 0.00 44.20 4.45
2054 2146 1.529744 TTTCCTGGAGAAACCCTGGT 58.470 50.000 0.00 0.00 43.45 4.00
2055 2147 1.529744 TTCCTGGAGAAACCCTGGTT 58.470 50.000 0.00 0.00 43.45 3.67
2067 2159 1.289109 CCCTGGTTCGCGTACTGTTG 61.289 60.000 15.61 3.91 0.00 3.33
2069 2161 1.218875 CTGGTTCGCGTACTGTTGCA 61.219 55.000 15.61 3.94 0.00 4.08
2079 2171 2.743636 TACTGTTGCAGTACCAGAGC 57.256 50.000 5.03 0.00 43.46 4.09
2080 2172 1.051812 ACTGTTGCAGTACCAGAGCT 58.948 50.000 10.51 0.00 43.46 4.09
2082 2174 2.028930 ACTGTTGCAGTACCAGAGCTAC 60.029 50.000 10.51 4.53 43.46 3.58
2083 2175 1.067846 TGTTGCAGTACCAGAGCTACG 60.068 52.381 0.00 0.00 36.93 3.51
2084 2176 0.108804 TTGCAGTACCAGAGCTACGC 60.109 55.000 0.00 0.00 0.00 4.42
2085 2177 0.965866 TGCAGTACCAGAGCTACGCT 60.966 55.000 0.00 0.00 43.88 5.07
2086 2178 0.526524 GCAGTACCAGAGCTACGCTG 60.527 60.000 0.00 0.00 39.88 5.18
2197 2300 1.649348 CGGCGCAGTACGTACGTAG 60.649 63.158 27.48 17.82 46.11 3.51
2230 2337 1.961277 CAGGTCGCTGTTCGGCTTT 60.961 57.895 2.15 0.00 43.48 3.51
2231 2338 1.668151 AGGTCGCTGTTCGGCTTTC 60.668 57.895 2.15 0.00 43.48 2.62
2232 2339 2.470286 GTCGCTGTTCGGCTTTCG 59.530 61.111 2.15 0.00 40.20 3.46
2233 2340 3.411351 TCGCTGTTCGGCTTTCGC 61.411 61.111 2.15 0.00 39.05 4.70
2296 2403 1.343821 GTACGCCGTGCAATCTTCG 59.656 57.895 0.00 0.00 0.00 3.79
2298 2405 0.179121 TACGCCGTGCAATCTTCGAT 60.179 50.000 0.00 0.00 0.00 3.59
2310 2417 4.784329 CAATCTTCGATCGTCGGAAGATA 58.216 43.478 22.60 4.74 41.32 1.98
2311 2418 5.394802 CAATCTTCGATCGTCGGAAGATAT 58.605 41.667 22.60 13.83 41.32 1.63
2312 2419 6.543736 CAATCTTCGATCGTCGGAAGATATA 58.456 40.000 22.60 3.88 41.32 0.86
2313 2420 6.928979 ATCTTCGATCGTCGGAAGATATAT 57.071 37.500 21.57 5.50 40.88 0.86
2314 2421 8.336080 CAATCTTCGATCGTCGGAAGATATATA 58.664 37.037 22.60 3.02 41.32 0.86
2315 2422 7.466193 TCTTCGATCGTCGGAAGATATATAG 57.534 40.000 15.94 3.33 45.19 1.31
2316 2423 5.654317 TCGATCGTCGGAAGATATATAGC 57.346 43.478 15.94 0.00 45.19 2.97
2317 2424 5.114081 TCGATCGTCGGAAGATATATAGCA 58.886 41.667 15.94 0.00 45.19 3.49
2318 2425 5.234543 TCGATCGTCGGAAGATATATAGCAG 59.765 44.000 15.94 0.00 45.19 4.24
2319 2426 5.234543 CGATCGTCGGAAGATATATAGCAGA 59.765 44.000 7.03 0.00 45.19 4.26
2320 2427 6.563196 CGATCGTCGGAAGATATATAGCAGAG 60.563 46.154 7.03 0.00 45.19 3.35
2321 2428 5.731591 TCGTCGGAAGATATATAGCAGAGA 58.268 41.667 0.07 0.00 45.19 3.10
2322 2429 5.581479 TCGTCGGAAGATATATAGCAGAGAC 59.419 44.000 0.07 3.87 45.19 3.36
2323 2430 5.351740 CGTCGGAAGATATATAGCAGAGACA 59.648 44.000 0.07 0.00 45.19 3.41
2324 2431 6.456315 CGTCGGAAGATATATAGCAGAGACAG 60.456 46.154 0.07 0.00 45.19 3.51
2325 2432 6.596106 GTCGGAAGATATATAGCAGAGACAGA 59.404 42.308 0.07 0.00 45.19 3.41
2326 2433 6.821160 TCGGAAGATATATAGCAGAGACAGAG 59.179 42.308 0.07 0.00 33.31 3.35
2327 2434 6.597672 CGGAAGATATATAGCAGAGACAGAGT 59.402 42.308 0.07 0.00 0.00 3.24
2328 2435 7.201609 CGGAAGATATATAGCAGAGACAGAGTC 60.202 44.444 0.07 0.00 0.00 3.36
2329 2436 7.201609 GGAAGATATATAGCAGAGACAGAGTCG 60.202 44.444 0.07 0.00 37.67 4.18
2330 2437 6.941857 AGATATATAGCAGAGACAGAGTCGA 58.058 40.000 0.07 0.00 37.67 4.20
2331 2438 7.564793 AGATATATAGCAGAGACAGAGTCGAT 58.435 38.462 0.07 0.00 37.67 3.59
2332 2439 8.046708 AGATATATAGCAGAGACAGAGTCGATT 58.953 37.037 0.07 0.00 37.67 3.34
2333 2440 4.829064 ATAGCAGAGACAGAGTCGATTC 57.171 45.455 0.00 0.00 37.67 2.52
2334 2441 1.748493 AGCAGAGACAGAGTCGATTCC 59.252 52.381 4.05 0.00 37.67 3.01
2335 2442 1.202359 GCAGAGACAGAGTCGATTCCC 60.202 57.143 4.05 0.00 37.67 3.97
2336 2443 1.064803 CAGAGACAGAGTCGATTCCCG 59.935 57.143 4.05 0.00 37.67 5.14
2337 2444 1.096416 GAGACAGAGTCGATTCCCGT 58.904 55.000 4.05 2.31 37.67 5.28
2338 2445 1.473278 GAGACAGAGTCGATTCCCGTT 59.527 52.381 4.05 0.00 37.67 4.44
2339 2446 1.202582 AGACAGAGTCGATTCCCGTTG 59.797 52.381 4.05 0.00 37.67 4.10
2340 2447 0.246635 ACAGAGTCGATTCCCGTTGG 59.753 55.000 4.05 0.00 39.75 3.77
2341 2448 0.530744 CAGAGTCGATTCCCGTTGGA 59.469 55.000 4.05 0.00 39.54 3.53
2348 2455 4.473643 TTCCCGTTGGAAGCACTG 57.526 55.556 0.00 0.00 45.88 3.66
2349 2456 1.896660 TTCCCGTTGGAAGCACTGC 60.897 57.895 0.00 0.00 45.88 4.40
2350 2457 2.594303 CCCGTTGGAAGCACTGCA 60.594 61.111 3.30 0.00 0.00 4.41
2351 2458 1.973281 CCCGTTGGAAGCACTGCAT 60.973 57.895 3.30 0.00 0.00 3.96
2352 2459 1.210931 CCGTTGGAAGCACTGCATG 59.789 57.895 3.30 0.00 0.00 4.06
2353 2460 1.210931 CGTTGGAAGCACTGCATGG 59.789 57.895 3.30 0.00 0.00 3.66
2354 2461 1.518056 CGTTGGAAGCACTGCATGGT 61.518 55.000 3.30 0.00 42.22 3.55
2355 2462 1.533625 GTTGGAAGCACTGCATGGTA 58.466 50.000 3.30 0.00 38.37 3.25
2356 2463 1.885887 GTTGGAAGCACTGCATGGTAA 59.114 47.619 3.30 0.00 38.37 2.85
2357 2464 1.825090 TGGAAGCACTGCATGGTAAG 58.175 50.000 3.30 0.00 38.37 2.34
2358 2465 1.098050 GGAAGCACTGCATGGTAAGG 58.902 55.000 3.30 0.00 38.37 2.69
2359 2466 0.453390 GAAGCACTGCATGGTAAGGC 59.547 55.000 3.30 0.00 38.37 4.35
2360 2467 0.038744 AAGCACTGCATGGTAAGGCT 59.961 50.000 3.30 0.00 38.37 4.58
2361 2468 0.911769 AGCACTGCATGGTAAGGCTA 59.088 50.000 3.30 0.00 37.23 3.93
2362 2469 1.492176 AGCACTGCATGGTAAGGCTAT 59.508 47.619 3.30 0.00 37.23 2.97
2363 2470 2.705658 AGCACTGCATGGTAAGGCTATA 59.294 45.455 3.30 0.00 37.23 1.31
2364 2471 3.328931 AGCACTGCATGGTAAGGCTATAT 59.671 43.478 3.30 0.00 37.23 0.86
2365 2472 3.438087 GCACTGCATGGTAAGGCTATATG 59.562 47.826 0.00 0.00 33.17 1.78
2366 2473 4.005650 CACTGCATGGTAAGGCTATATGG 58.994 47.826 0.00 0.00 33.17 2.74
2367 2474 3.652869 ACTGCATGGTAAGGCTATATGGT 59.347 43.478 0.00 0.00 33.17 3.55
2368 2475 4.256920 CTGCATGGTAAGGCTATATGGTC 58.743 47.826 0.00 0.00 33.17 4.02
2369 2476 3.650461 TGCATGGTAAGGCTATATGGTCA 59.350 43.478 0.00 0.00 33.17 4.02
2370 2477 4.256920 GCATGGTAAGGCTATATGGTCAG 58.743 47.826 0.00 0.00 0.00 3.51
2371 2478 4.263068 GCATGGTAAGGCTATATGGTCAGT 60.263 45.833 0.00 0.00 0.00 3.41
2372 2479 4.955811 TGGTAAGGCTATATGGTCAGTG 57.044 45.455 0.00 0.00 0.00 3.66
2373 2480 4.552674 TGGTAAGGCTATATGGTCAGTGA 58.447 43.478 0.00 0.00 0.00 3.41
2374 2481 4.966168 TGGTAAGGCTATATGGTCAGTGAA 59.034 41.667 0.00 0.00 0.00 3.18
2375 2482 5.427157 TGGTAAGGCTATATGGTCAGTGAAA 59.573 40.000 0.00 0.00 0.00 2.69
2376 2483 6.101150 TGGTAAGGCTATATGGTCAGTGAAAT 59.899 38.462 0.00 0.00 0.00 2.17
2377 2484 6.428159 GGTAAGGCTATATGGTCAGTGAAATG 59.572 42.308 0.00 0.00 0.00 2.32
2378 2485 4.392940 AGGCTATATGGTCAGTGAAATGC 58.607 43.478 0.00 0.00 0.00 3.56
2379 2486 4.103785 AGGCTATATGGTCAGTGAAATGCT 59.896 41.667 0.00 0.00 0.00 3.79
2380 2487 4.453819 GGCTATATGGTCAGTGAAATGCTC 59.546 45.833 0.00 0.00 0.00 4.26
2381 2488 4.151335 GCTATATGGTCAGTGAAATGCTCG 59.849 45.833 0.00 0.00 0.00 5.03
2382 2489 2.479566 ATGGTCAGTGAAATGCTCGT 57.520 45.000 0.00 0.00 0.00 4.18
2383 2490 2.254546 TGGTCAGTGAAATGCTCGTT 57.745 45.000 0.00 0.00 0.00 3.85
2384 2491 2.571212 TGGTCAGTGAAATGCTCGTTT 58.429 42.857 0.00 0.00 0.00 3.60
2385 2492 2.548057 TGGTCAGTGAAATGCTCGTTTC 59.452 45.455 0.00 7.44 38.32 2.78
2386 2493 2.548057 GGTCAGTGAAATGCTCGTTTCA 59.452 45.455 11.90 11.90 43.66 2.69
2387 2494 3.364366 GGTCAGTGAAATGCTCGTTTCAG 60.364 47.826 15.27 7.27 45.71 3.02
2388 2495 3.494626 GTCAGTGAAATGCTCGTTTCAGA 59.505 43.478 15.27 9.08 45.71 3.27
2389 2496 3.494626 TCAGTGAAATGCTCGTTTCAGAC 59.505 43.478 15.27 7.12 45.71 3.51
2390 2497 2.808543 AGTGAAATGCTCGTTTCAGACC 59.191 45.455 15.27 6.55 45.71 3.85
2391 2498 1.798223 TGAAATGCTCGTTTCAGACCG 59.202 47.619 11.90 0.00 41.70 4.79
2392 2499 2.066262 GAAATGCTCGTTTCAGACCGA 58.934 47.619 9.10 0.00 37.87 4.69
2393 2500 2.386661 AATGCTCGTTTCAGACCGAT 57.613 45.000 0.00 0.00 31.90 4.18
2394 2501 3.520290 AATGCTCGTTTCAGACCGATA 57.480 42.857 0.00 0.00 31.90 2.92
2395 2502 2.561733 TGCTCGTTTCAGACCGATAG 57.438 50.000 0.00 0.00 31.90 2.08
2409 2516 2.802787 CGATAGGAAGAACCGCAGAT 57.197 50.000 0.00 0.00 44.74 2.90
2410 2517 3.099267 CGATAGGAAGAACCGCAGATT 57.901 47.619 0.00 0.00 44.74 2.40
2411 2518 3.458189 CGATAGGAAGAACCGCAGATTT 58.542 45.455 0.00 0.00 44.74 2.17
2412 2519 3.871594 CGATAGGAAGAACCGCAGATTTT 59.128 43.478 0.00 0.00 44.74 1.82
2413 2520 4.332819 CGATAGGAAGAACCGCAGATTTTT 59.667 41.667 0.00 0.00 44.74 1.94
2434 2541 4.101448 CCAGAAGGACCCCTGGCG 62.101 72.222 15.31 0.00 42.84 5.69
2435 2542 3.003173 CAGAAGGACCCCTGGCGA 61.003 66.667 4.06 0.00 32.13 5.54
2436 2543 2.203938 AGAAGGACCCCTGGCGAA 60.204 61.111 0.00 0.00 32.13 4.70
2437 2544 2.046217 GAAGGACCCCTGGCGAAC 60.046 66.667 0.00 0.00 32.13 3.95
2438 2545 2.852075 AAGGACCCCTGGCGAACA 60.852 61.111 0.00 0.00 32.13 3.18
2451 2558 4.377839 TGGCGAACAGAATTGTCAAAAA 57.622 36.364 0.00 0.00 36.23 1.94
2452 2559 4.358851 TGGCGAACAGAATTGTCAAAAAG 58.641 39.130 0.00 0.00 36.23 2.27
2453 2560 3.735746 GGCGAACAGAATTGTCAAAAAGG 59.264 43.478 0.00 0.00 36.23 3.11
2454 2561 4.499019 GGCGAACAGAATTGTCAAAAAGGA 60.499 41.667 0.00 0.00 36.23 3.36
2455 2562 4.441087 GCGAACAGAATTGTCAAAAAGGAC 59.559 41.667 0.00 0.00 36.23 3.85
2456 2563 4.976116 CGAACAGAATTGTCAAAAAGGACC 59.024 41.667 0.00 0.00 36.23 4.46
2457 2564 5.449862 CGAACAGAATTGTCAAAAAGGACCA 60.450 40.000 0.00 0.00 36.23 4.02
2458 2565 5.262588 ACAGAATTGTCAAAAAGGACCAC 57.737 39.130 0.00 0.00 36.97 4.16
2459 2566 4.956075 ACAGAATTGTCAAAAAGGACCACT 59.044 37.500 0.00 0.00 36.97 4.00
2460 2567 5.067805 ACAGAATTGTCAAAAAGGACCACTC 59.932 40.000 0.00 0.00 36.97 3.51
2461 2568 5.067674 CAGAATTGTCAAAAAGGACCACTCA 59.932 40.000 0.00 0.00 36.97 3.41
2462 2569 5.300286 AGAATTGTCAAAAAGGACCACTCAG 59.700 40.000 0.00 0.00 36.97 3.35
2463 2570 2.297701 TGTCAAAAAGGACCACTCAGC 58.702 47.619 0.00 0.00 36.97 4.26
2464 2571 1.264288 GTCAAAAAGGACCACTCAGCG 59.736 52.381 0.00 0.00 0.00 5.18
2465 2572 1.140052 TCAAAAAGGACCACTCAGCGA 59.860 47.619 0.00 0.00 0.00 4.93
2466 2573 1.946768 CAAAAAGGACCACTCAGCGAA 59.053 47.619 0.00 0.00 0.00 4.70
2467 2574 2.341846 AAAAGGACCACTCAGCGAAA 57.658 45.000 0.00 0.00 0.00 3.46
2468 2575 2.341846 AAAGGACCACTCAGCGAAAA 57.658 45.000 0.00 0.00 0.00 2.29
2469 2576 1.594331 AAGGACCACTCAGCGAAAAC 58.406 50.000 0.00 0.00 0.00 2.43
2470 2577 0.759346 AGGACCACTCAGCGAAAACT 59.241 50.000 0.00 0.00 0.00 2.66
2471 2578 1.141053 AGGACCACTCAGCGAAAACTT 59.859 47.619 0.00 0.00 0.00 2.66
2472 2579 1.947456 GGACCACTCAGCGAAAACTTT 59.053 47.619 0.00 0.00 0.00 2.66
2473 2580 2.287009 GGACCACTCAGCGAAAACTTTG 60.287 50.000 0.00 0.00 0.00 2.77
2474 2581 2.612212 GACCACTCAGCGAAAACTTTGA 59.388 45.455 0.00 0.00 0.00 2.69
2475 2582 3.214328 ACCACTCAGCGAAAACTTTGAT 58.786 40.909 0.00 0.00 0.00 2.57
2476 2583 4.385825 ACCACTCAGCGAAAACTTTGATA 58.614 39.130 0.00 0.00 0.00 2.15
2477 2584 4.819630 ACCACTCAGCGAAAACTTTGATAA 59.180 37.500 0.00 0.00 0.00 1.75
2478 2585 5.298276 ACCACTCAGCGAAAACTTTGATAAA 59.702 36.000 0.00 0.00 0.00 1.40
2479 2586 6.183360 ACCACTCAGCGAAAACTTTGATAAAA 60.183 34.615 0.00 0.00 0.00 1.52
2480 2587 6.360681 CCACTCAGCGAAAACTTTGATAAAAG 59.639 38.462 0.52 0.52 35.93 2.27
2481 2588 6.360681 CACTCAGCGAAAACTTTGATAAAAGG 59.639 38.462 7.49 0.00 34.18 3.11
2482 2589 5.768317 TCAGCGAAAACTTTGATAAAAGGG 58.232 37.500 7.49 0.00 34.18 3.95
2483 2590 5.533154 TCAGCGAAAACTTTGATAAAAGGGA 59.467 36.000 7.49 0.00 34.18 4.20
2484 2591 5.629435 CAGCGAAAACTTTGATAAAAGGGAC 59.371 40.000 7.49 0.00 34.18 4.46
2485 2592 4.921515 GCGAAAACTTTGATAAAAGGGACC 59.078 41.667 7.49 0.00 34.18 4.46
2486 2593 5.278808 GCGAAAACTTTGATAAAAGGGACCT 60.279 40.000 7.49 0.00 34.18 3.85
2487 2594 6.379386 CGAAAACTTTGATAAAAGGGACCTC 58.621 40.000 7.49 0.00 34.18 3.85
2488 2595 6.569801 CGAAAACTTTGATAAAAGGGACCTCC 60.570 42.308 7.49 0.00 34.18 4.30
2496 2603 3.659496 AGGGACCTCCTCGACCGT 61.659 66.667 0.00 0.00 44.06 4.83
2497 2604 3.450115 GGGACCTCCTCGACCGTG 61.450 72.222 0.00 0.00 35.95 4.94
2498 2605 3.450115 GGACCTCCTCGACCGTGG 61.450 72.222 4.31 4.31 0.00 4.94
2499 2606 4.131088 GACCTCCTCGACCGTGGC 62.131 72.222 5.71 0.00 0.00 5.01
2526 2633 4.673403 GGCAGACGACATGTGTCA 57.327 55.556 22.16 0.00 44.99 3.58
2527 2634 2.153913 GGCAGACGACATGTGTCAC 58.846 57.895 22.16 16.03 44.99 3.67
2528 2635 1.291877 GGCAGACGACATGTGTCACC 61.292 60.000 22.16 19.31 44.99 4.02
2529 2636 0.319900 GCAGACGACATGTGTCACCT 60.320 55.000 22.16 6.28 44.99 4.00
2530 2637 1.422388 CAGACGACATGTGTCACCTG 58.578 55.000 22.16 13.36 44.99 4.00
2531 2638 0.319900 AGACGACATGTGTCACCTGC 60.320 55.000 22.16 1.52 44.99 4.85
2532 2639 1.291877 GACGACATGTGTCACCTGCC 61.292 60.000 1.15 0.00 44.99 4.85
2533 2640 2.382746 CGACATGTGTCACCTGCCG 61.383 63.158 1.15 5.47 44.99 5.69
2534 2641 2.669569 ACATGTGTCACCTGCCGC 60.670 61.111 8.04 0.00 0.00 6.53
2535 2642 3.434319 CATGTGTCACCTGCCGCC 61.434 66.667 0.00 0.00 0.00 6.13
2536 2643 3.952508 ATGTGTCACCTGCCGCCA 61.953 61.111 0.00 0.00 0.00 5.69
2537 2644 4.927782 TGTGTCACCTGCCGCCAC 62.928 66.667 0.00 0.00 0.00 5.01
2566 2673 3.116531 GCGAGCCGGCTAAAACGT 61.117 61.111 32.97 4.99 0.00 3.99
2567 2674 2.776072 CGAGCCGGCTAAAACGTG 59.224 61.111 32.97 9.49 0.00 4.49
2568 2675 1.735198 CGAGCCGGCTAAAACGTGA 60.735 57.895 32.97 0.00 0.00 4.35
2569 2676 1.286354 CGAGCCGGCTAAAACGTGAA 61.286 55.000 32.97 0.00 0.00 3.18
2570 2677 1.084289 GAGCCGGCTAAAACGTGAAT 58.916 50.000 32.97 1.35 0.00 2.57
2571 2678 1.062148 GAGCCGGCTAAAACGTGAATC 59.938 52.381 32.97 8.77 0.00 2.52
2572 2679 0.800012 GCCGGCTAAAACGTGAATCA 59.200 50.000 22.15 0.00 0.00 2.57
2573 2680 1.465187 GCCGGCTAAAACGTGAATCAC 60.465 52.381 22.15 2.75 0.00 3.06
2574 2681 1.801771 CCGGCTAAAACGTGAATCACA 59.198 47.619 14.24 0.00 33.40 3.58
2575 2682 2.412325 CCGGCTAAAACGTGAATCACAC 60.412 50.000 14.24 0.00 45.11 3.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.109272 TGTTGCGGAAGACTCTAGCG 60.109 55.000 0.00 0.00 0.00 4.26
1 2 1.351153 GTGTTGCGGAAGACTCTAGC 58.649 55.000 9.77 0.00 0.00 3.42
2 3 1.618861 CGTGTTGCGGAAGACTCTAG 58.381 55.000 14.75 0.00 36.85 2.43
3 4 3.786809 CGTGTTGCGGAAGACTCTA 57.213 52.632 14.75 0.00 36.85 2.43
4 5 4.655527 CGTGTTGCGGAAGACTCT 57.344 55.556 14.75 0.00 36.85 3.24
21 22 1.812507 AACGGAAATCGCGGTAGCC 60.813 57.895 6.13 2.82 43.89 3.93
22 23 1.347221 CAACGGAAATCGCGGTAGC 59.653 57.895 6.13 0.00 43.89 3.58
23 24 0.643820 GACAACGGAAATCGCGGTAG 59.356 55.000 6.13 0.00 43.89 3.18
24 25 1.072116 CGACAACGGAAATCGCGGTA 61.072 55.000 6.13 0.00 43.89 4.02
25 26 2.377310 CGACAACGGAAATCGCGGT 61.377 57.895 6.13 0.00 43.89 5.68
26 27 1.893168 AACGACAACGGAAATCGCGG 61.893 55.000 6.13 0.00 44.46 6.46
27 28 0.784250 CAACGACAACGGAAATCGCG 60.784 55.000 0.00 0.00 44.46 5.87
28 29 1.058057 GCAACGACAACGGAAATCGC 61.058 55.000 0.00 0.00 44.46 4.58
29 30 0.452122 GGCAACGACAACGGAAATCG 60.452 55.000 0.00 0.00 44.46 3.34
30 31 0.589223 TGGCAACGACAACGGAAATC 59.411 50.000 0.00 0.00 44.46 2.17
31 32 1.001815 CTTGGCAACGACAACGGAAAT 60.002 47.619 0.00 0.00 44.46 2.17
32 33 0.378962 CTTGGCAACGACAACGGAAA 59.621 50.000 0.00 0.00 44.46 3.13
33 34 0.462225 TCTTGGCAACGACAACGGAA 60.462 50.000 0.00 0.00 44.46 4.30
34 35 0.250124 ATCTTGGCAACGACAACGGA 60.250 50.000 0.00 0.00 44.46 4.69
35 36 0.165944 GATCTTGGCAACGACAACGG 59.834 55.000 0.00 0.00 44.46 4.44
36 37 0.865111 TGATCTTGGCAACGACAACG 59.135 50.000 0.00 0.00 45.75 4.10
37 38 3.003275 TCTTTGATCTTGGCAACGACAAC 59.997 43.478 0.00 0.00 42.51 3.32
38 39 3.210227 TCTTTGATCTTGGCAACGACAA 58.790 40.909 0.00 0.00 42.51 3.18
39 40 2.807967 CTCTTTGATCTTGGCAACGACA 59.192 45.455 0.00 0.00 42.51 4.35
40 41 2.160417 CCTCTTTGATCTTGGCAACGAC 59.840 50.000 0.00 0.00 42.51 4.34
41 42 2.038426 TCCTCTTTGATCTTGGCAACGA 59.962 45.455 0.00 0.00 42.51 3.85
42 43 2.426522 TCCTCTTTGATCTTGGCAACG 58.573 47.619 0.00 0.00 42.51 4.10
43 44 3.366781 GCTTCCTCTTTGATCTTGGCAAC 60.367 47.826 0.00 0.00 0.00 4.17
44 45 2.821969 GCTTCCTCTTTGATCTTGGCAA 59.178 45.455 0.00 0.00 0.00 4.52
45 46 2.440409 GCTTCCTCTTTGATCTTGGCA 58.560 47.619 0.00 0.00 0.00 4.92
46 47 1.747924 GGCTTCCTCTTTGATCTTGGC 59.252 52.381 0.00 0.00 0.00 4.52
47 48 3.362870 AGGCTTCCTCTTTGATCTTGG 57.637 47.619 0.00 0.00 0.00 3.61
48 49 5.927819 AGATAGGCTTCCTCTTTGATCTTG 58.072 41.667 0.00 0.00 34.61 3.02
49 50 6.573712 AAGATAGGCTTCCTCTTTGATCTT 57.426 37.500 0.00 0.00 32.35 2.40
50 51 6.355747 CAAAGATAGGCTTCCTCTTTGATCT 58.644 40.000 26.38 11.23 42.80 2.75
51 52 5.530543 CCAAAGATAGGCTTCCTCTTTGATC 59.469 44.000 29.24 12.05 42.80 2.92
52 53 5.444176 CCAAAGATAGGCTTCCTCTTTGAT 58.556 41.667 29.24 4.83 42.80 2.57
53 54 4.324563 CCCAAAGATAGGCTTCCTCTTTGA 60.325 45.833 29.24 0.46 42.80 2.69
54 55 3.950395 CCCAAAGATAGGCTTCCTCTTTG 59.050 47.826 24.95 24.95 41.30 2.77
55 56 3.625969 GCCCAAAGATAGGCTTCCTCTTT 60.626 47.826 11.41 11.41 46.14 2.52
56 57 2.092158 GCCCAAAGATAGGCTTCCTCTT 60.092 50.000 0.00 0.00 46.14 2.85
57 58 1.492599 GCCCAAAGATAGGCTTCCTCT 59.507 52.381 0.00 0.00 46.14 3.69
58 59 1.974265 GCCCAAAGATAGGCTTCCTC 58.026 55.000 0.00 0.00 46.14 3.71
64 65 2.189499 CCAGCGCCCAAAGATAGGC 61.189 63.158 2.29 0.00 46.17 3.93
65 66 2.189499 GCCAGCGCCCAAAGATAGG 61.189 63.158 2.29 0.00 0.00 2.57
66 67 1.153086 AGCCAGCGCCCAAAGATAG 60.153 57.895 2.29 0.00 34.57 2.08
67 68 1.451927 CAGCCAGCGCCCAAAGATA 60.452 57.895 2.29 0.00 34.57 1.98
68 69 2.753043 CAGCCAGCGCCCAAAGAT 60.753 61.111 2.29 0.00 34.57 2.40
83 84 3.324930 TCAGGTGCCTGGCTCCAG 61.325 66.667 34.04 28.12 43.69 3.86
84 85 2.746947 TACTCAGGTGCCTGGCTCCA 62.747 60.000 34.04 18.32 43.69 3.86
85 86 1.990060 TACTCAGGTGCCTGGCTCC 60.990 63.158 28.02 28.02 43.75 4.70
86 87 1.219393 GTACTCAGGTGCCTGGCTC 59.781 63.158 21.03 16.47 43.75 4.70
87 88 1.229336 AGTACTCAGGTGCCTGGCT 60.229 57.895 21.03 8.51 43.75 4.75
88 89 1.219393 GAGTACTCAGGTGCCTGGC 59.781 63.158 18.20 12.87 43.75 4.85
89 90 2.145397 TAGAGTACTCAGGTGCCTGG 57.855 55.000 24.44 10.81 43.75 4.45
90 91 3.449018 ACATTAGAGTACTCAGGTGCCTG 59.551 47.826 24.44 11.82 44.86 4.85
91 92 3.702045 GACATTAGAGTACTCAGGTGCCT 59.298 47.826 24.44 4.78 0.00 4.75
92 93 3.489398 CGACATTAGAGTACTCAGGTGCC 60.489 52.174 24.44 10.77 0.00 5.01
93 94 3.696898 CGACATTAGAGTACTCAGGTGC 58.303 50.000 24.44 13.04 0.00 5.01
94 95 3.696898 GCGACATTAGAGTACTCAGGTG 58.303 50.000 24.44 19.27 0.00 4.00
95 96 2.355132 CGCGACATTAGAGTACTCAGGT 59.645 50.000 24.44 12.54 0.00 4.00
96 97 2.612672 TCGCGACATTAGAGTACTCAGG 59.387 50.000 24.44 9.32 0.00 3.86
97 98 3.556365 TCTCGCGACATTAGAGTACTCAG 59.444 47.826 24.44 13.15 33.96 3.35
98 99 3.528532 TCTCGCGACATTAGAGTACTCA 58.471 45.455 24.44 5.48 33.96 3.41
99 100 3.556775 ACTCTCGCGACATTAGAGTACTC 59.443 47.826 21.99 15.41 46.20 2.59
100 101 3.533547 ACTCTCGCGACATTAGAGTACT 58.466 45.455 21.99 0.00 46.20 2.73
101 102 3.948196 ACTCTCGCGACATTAGAGTAC 57.052 47.619 21.99 0.00 46.20 2.73
102 103 4.691175 ACTACTCTCGCGACATTAGAGTA 58.309 43.478 24.79 24.79 46.20 2.59
104 105 3.059461 GGACTACTCTCGCGACATTAGAG 60.059 52.174 17.73 17.73 42.04 2.43
105 106 2.871022 GGACTACTCTCGCGACATTAGA 59.129 50.000 14.10 5.43 0.00 2.10
106 107 2.873472 AGGACTACTCTCGCGACATTAG 59.127 50.000 3.71 5.91 0.00 1.73
107 108 2.915349 AGGACTACTCTCGCGACATTA 58.085 47.619 3.71 0.00 0.00 1.90
108 109 1.752683 AGGACTACTCTCGCGACATT 58.247 50.000 3.71 0.00 0.00 2.71
109 110 1.752683 AAGGACTACTCTCGCGACAT 58.247 50.000 3.71 0.00 0.00 3.06
110 111 1.531423 AAAGGACTACTCTCGCGACA 58.469 50.000 3.71 0.00 0.00 4.35
111 112 2.162008 AGAAAAGGACTACTCTCGCGAC 59.838 50.000 3.71 0.00 0.00 5.19
112 113 2.434428 AGAAAAGGACTACTCTCGCGA 58.566 47.619 9.26 9.26 0.00 5.87
113 114 2.923605 AGAAAAGGACTACTCTCGCG 57.076 50.000 0.00 0.00 0.00 5.87
114 115 5.926214 AAAAAGAAAAGGACTACTCTCGC 57.074 39.130 0.00 0.00 0.00 5.03
141 142 3.620929 TTAGACATAAGCCGTAGAGCG 57.379 47.619 0.00 0.00 38.01 5.03
142 143 4.049869 GGTTTAGACATAAGCCGTAGAGC 58.950 47.826 0.00 0.00 33.27 4.09
143 144 5.517322 AGGTTTAGACATAAGCCGTAGAG 57.483 43.478 0.00 0.00 44.62 2.43
144 145 5.655532 AGAAGGTTTAGACATAAGCCGTAGA 59.344 40.000 0.00 0.00 44.62 2.59
145 146 5.903810 AGAAGGTTTAGACATAAGCCGTAG 58.096 41.667 0.00 0.00 44.62 3.51
146 147 5.927281 AGAAGGTTTAGACATAAGCCGTA 57.073 39.130 0.00 0.00 44.62 4.02
147 148 4.820894 AGAAGGTTTAGACATAAGCCGT 57.179 40.909 0.00 0.00 44.62 5.68
148 149 5.420409 AGAAGAAGGTTTAGACATAAGCCG 58.580 41.667 0.00 0.00 44.62 5.52
149 150 8.788325 TTAAGAAGAAGGTTTAGACATAAGCC 57.212 34.615 0.00 0.00 41.34 4.35
174 175 8.992073 GGCAAAAGACTTGTCATTTTCATTAAT 58.008 29.630 3.49 0.00 0.00 1.40
175 176 8.203485 AGGCAAAAGACTTGTCATTTTCATTAA 58.797 29.630 3.49 0.00 0.00 1.40
176 177 7.725251 AGGCAAAAGACTTGTCATTTTCATTA 58.275 30.769 3.49 0.00 0.00 1.90
177 178 6.585416 AGGCAAAAGACTTGTCATTTTCATT 58.415 32.000 3.49 0.00 0.00 2.57
178 179 6.165700 AGGCAAAAGACTTGTCATTTTCAT 57.834 33.333 3.49 0.00 0.00 2.57
179 180 5.596836 AGGCAAAAGACTTGTCATTTTCA 57.403 34.783 3.49 0.00 0.00 2.69
180 181 6.739112 ACTAGGCAAAAGACTTGTCATTTTC 58.261 36.000 3.49 0.00 0.00 2.29
181 182 6.715347 ACTAGGCAAAAGACTTGTCATTTT 57.285 33.333 3.49 4.83 0.00 1.82
182 183 6.715347 AACTAGGCAAAAGACTTGTCATTT 57.285 33.333 3.49 1.13 0.00 2.32
183 184 6.715347 AAACTAGGCAAAAGACTTGTCATT 57.285 33.333 3.49 0.00 0.00 2.57
184 185 7.817418 TTAAACTAGGCAAAAGACTTGTCAT 57.183 32.000 3.49 0.00 0.00 3.06
185 186 7.633193 TTTAAACTAGGCAAAAGACTTGTCA 57.367 32.000 3.49 0.00 0.00 3.58
186 187 8.920509 TTTTTAAACTAGGCAAAAGACTTGTC 57.079 30.769 0.00 0.00 0.00 3.18
211 212 1.003223 GGCGTCACAGCGTTACTTTTT 60.003 47.619 0.00 0.00 38.18 1.94
212 213 0.584876 GGCGTCACAGCGTTACTTTT 59.415 50.000 0.00 0.00 38.18 2.27
213 214 0.531090 TGGCGTCACAGCGTTACTTT 60.531 50.000 0.00 0.00 38.18 2.66
214 215 0.944311 CTGGCGTCACAGCGTTACTT 60.944 55.000 0.00 0.00 38.18 2.24
215 216 1.372997 CTGGCGTCACAGCGTTACT 60.373 57.895 0.00 0.00 38.18 2.24
216 217 2.380410 CCTGGCGTCACAGCGTTAC 61.380 63.158 0.00 0.00 37.16 2.50
217 218 2.048597 CCTGGCGTCACAGCGTTA 60.049 61.111 0.00 0.00 37.16 3.18
230 231 2.360852 CACTGGAAGCCTGCCTGG 60.361 66.667 0.09 0.00 37.60 4.45
231 232 1.673665 GACACTGGAAGCCTGCCTG 60.674 63.158 0.00 0.00 37.60 4.85
232 233 1.835927 GAGACACTGGAAGCCTGCCT 61.836 60.000 0.00 0.00 37.60 4.75
233 234 1.376553 GAGACACTGGAAGCCTGCC 60.377 63.158 0.00 0.00 37.60 4.85
234 235 0.250467 TTGAGACACTGGAAGCCTGC 60.250 55.000 0.00 0.00 37.60 4.85
235 236 2.260844 TTTGAGACACTGGAAGCCTG 57.739 50.000 0.00 0.00 37.60 4.85
236 237 2.576615 GTTTTGAGACACTGGAAGCCT 58.423 47.619 0.00 0.00 37.60 4.58
237 238 1.609072 GGTTTTGAGACACTGGAAGCC 59.391 52.381 0.00 0.00 37.60 4.35
238 239 2.033424 GTGGTTTTGAGACACTGGAAGC 59.967 50.000 0.00 0.00 37.60 3.86
239 240 2.287915 CGTGGTTTTGAGACACTGGAAG 59.712 50.000 0.00 0.00 42.29 3.46
240 241 2.285083 CGTGGTTTTGAGACACTGGAA 58.715 47.619 0.00 0.00 33.13 3.53
241 242 1.208535 ACGTGGTTTTGAGACACTGGA 59.791 47.619 0.00 0.00 33.13 3.86
242 243 1.330521 CACGTGGTTTTGAGACACTGG 59.669 52.381 7.95 0.00 33.13 4.00
243 244 2.006888 ACACGTGGTTTTGAGACACTG 58.993 47.619 21.57 0.00 33.13 3.66
244 245 2.396590 ACACGTGGTTTTGAGACACT 57.603 45.000 21.57 0.00 33.13 3.55
285 286 8.612619 ACTACATGAGCCATAAATAAACGAAAG 58.387 33.333 0.00 0.00 0.00 2.62
290 291 6.136071 CGCACTACATGAGCCATAAATAAAC 58.864 40.000 0.00 0.00 0.00 2.01
291 292 5.238432 CCGCACTACATGAGCCATAAATAAA 59.762 40.000 0.00 0.00 0.00 1.40
322 331 1.257936 CAGAAAATATCGGACCACGCG 59.742 52.381 3.53 3.53 43.86 6.01
329 338 5.879777 TGTCAATTCTGCAGAAAATATCGGA 59.120 36.000 31.55 17.43 37.61 4.55
349 358 1.228245 GCCTGCTTTCCCACTGTCA 60.228 57.895 0.00 0.00 0.00 3.58
366 375 1.197264 ACGTAGATTCTATCCGCTCGC 59.803 52.381 0.00 0.00 0.00 5.03
389 403 2.505118 GGTGCGACGCTCTGAGAC 60.505 66.667 22.08 9.29 0.00 3.36
408 422 0.457166 TACGTGCGTTCAAGGATCCG 60.457 55.000 5.98 0.00 0.00 4.18
409 423 1.278238 CTACGTGCGTTCAAGGATCC 58.722 55.000 2.48 2.48 0.00 3.36
426 440 0.898320 GACCAACTGCAGCTCTCCTA 59.102 55.000 15.27 0.00 0.00 2.94
456 470 0.888619 GTTAAACCTTCCCTGGCTGC 59.111 55.000 0.00 0.00 0.00 5.25
476 490 4.519906 TTCTTTTGACCTTCCCTCTTGT 57.480 40.909 0.00 0.00 0.00 3.16
500 514 2.450476 AGAACCTGGTCAAATCATGGC 58.550 47.619 0.00 0.00 0.00 4.40
503 517 3.347216 CGGAAGAACCTGGTCAAATCAT 58.653 45.455 0.00 0.00 36.31 2.45
513 527 1.749634 ACTCGTATCCGGAAGAACCTG 59.250 52.381 9.01 4.50 36.31 4.00
529 543 3.400505 TGTATTGTAGACGCTCACTCG 57.599 47.619 0.00 0.00 0.00 4.18
535 549 5.880054 AGCAAAATTGTATTGTAGACGCT 57.120 34.783 0.00 0.00 0.00 5.07
538 552 7.425595 GCGAACTAGCAAAATTGTATTGTAGAC 59.574 37.037 0.00 0.00 37.05 2.59
541 555 7.118535 TCAGCGAACTAGCAAAATTGTATTGTA 59.881 33.333 0.00 0.00 40.15 2.41
542 556 6.072728 TCAGCGAACTAGCAAAATTGTATTGT 60.073 34.615 0.00 0.00 40.15 2.71
543 557 6.249260 GTCAGCGAACTAGCAAAATTGTATTG 59.751 38.462 0.00 0.00 40.15 1.90
544 558 6.314784 GTCAGCGAACTAGCAAAATTGTATT 58.685 36.000 0.00 0.00 40.15 1.89
545 559 5.445939 CGTCAGCGAACTAGCAAAATTGTAT 60.446 40.000 0.00 0.00 41.33 2.29
560 574 1.470098 GGACTAGGTTACGTCAGCGAA 59.530 52.381 0.00 0.00 42.00 4.70
579 593 3.574284 TGATCACGAAAGCAAAATGGG 57.426 42.857 0.00 0.00 0.00 4.00
580 594 5.162794 TGATTGATCACGAAAGCAAAATGG 58.837 37.500 0.00 0.00 0.00 3.16
581 595 6.693761 TTGATTGATCACGAAAGCAAAATG 57.306 33.333 0.00 0.00 36.36 2.32
582 596 7.599621 TCATTTGATTGATCACGAAAGCAAAAT 59.400 29.630 11.36 1.34 42.76 1.82
583 597 6.922407 TCATTTGATTGATCACGAAAGCAAAA 59.078 30.769 11.36 0.00 42.76 2.44
584 598 6.445475 TCATTTGATTGATCACGAAAGCAAA 58.555 32.000 10.10 10.10 43.40 3.68
585 599 6.011476 TCATTTGATTGATCACGAAAGCAA 57.989 33.333 0.00 0.00 36.36 3.91
586 600 5.625921 TCATTTGATTGATCACGAAAGCA 57.374 34.783 0.00 0.00 36.36 3.91
587 601 8.526681 GTTAATCATTTGATTGATCACGAAAGC 58.473 33.333 14.54 0.00 43.90 3.51
588 602 8.727733 CGTTAATCATTTGATTGATCACGAAAG 58.272 33.333 14.54 0.39 43.90 2.62
589 603 8.447053 TCGTTAATCATTTGATTGATCACGAAA 58.553 29.630 14.54 0.00 42.59 3.46
590 604 7.969314 TCGTTAATCATTTGATTGATCACGAA 58.031 30.769 14.54 0.00 42.59 3.85
591 605 7.532682 TCGTTAATCATTTGATTGATCACGA 57.467 32.000 14.54 16.65 43.90 4.35
592 606 7.321984 CCATCGTTAATCATTTGATTGATCACG 59.678 37.037 14.54 15.15 43.90 4.35
593 607 8.344831 TCCATCGTTAATCATTTGATTGATCAC 58.655 33.333 14.54 6.43 43.90 3.06
594 608 8.449251 TCCATCGTTAATCATTTGATTGATCA 57.551 30.769 14.54 0.00 43.90 2.92
595 609 8.777413 TCTCCATCGTTAATCATTTGATTGATC 58.223 33.333 14.54 5.49 43.90 2.92
596 610 8.681486 TCTCCATCGTTAATCATTTGATTGAT 57.319 30.769 14.54 7.23 43.90 2.57
597 611 8.397906 GTTCTCCATCGTTAATCATTTGATTGA 58.602 33.333 14.54 5.05 43.90 2.57
598 612 8.183536 TGTTCTCCATCGTTAATCATTTGATTG 58.816 33.333 14.54 0.51 43.90 2.67
599 613 8.279970 TGTTCTCCATCGTTAATCATTTGATT 57.720 30.769 10.42 10.42 45.77 2.57
600 614 7.770433 TCTGTTCTCCATCGTTAATCATTTGAT 59.230 33.333 0.00 0.00 36.07 2.57
601 615 7.102993 TCTGTTCTCCATCGTTAATCATTTGA 58.897 34.615 0.00 0.00 0.00 2.69
602 616 7.307493 TCTGTTCTCCATCGTTAATCATTTG 57.693 36.000 0.00 0.00 0.00 2.32
603 617 7.414540 GCTTCTGTTCTCCATCGTTAATCATTT 60.415 37.037 0.00 0.00 0.00 2.32
604 618 6.037610 GCTTCTGTTCTCCATCGTTAATCATT 59.962 38.462 0.00 0.00 0.00 2.57
605 619 5.525378 GCTTCTGTTCTCCATCGTTAATCAT 59.475 40.000 0.00 0.00 0.00 2.45
606 620 4.870426 GCTTCTGTTCTCCATCGTTAATCA 59.130 41.667 0.00 0.00 0.00 2.57
607 621 5.112686 AGCTTCTGTTCTCCATCGTTAATC 58.887 41.667 0.00 0.00 0.00 1.75
608 622 5.091261 AGCTTCTGTTCTCCATCGTTAAT 57.909 39.130 0.00 0.00 0.00 1.40
609 623 4.537135 AGCTTCTGTTCTCCATCGTTAA 57.463 40.909 0.00 0.00 0.00 2.01
610 624 4.537135 AAGCTTCTGTTCTCCATCGTTA 57.463 40.909 0.00 0.00 0.00 3.18
611 625 3.409026 AAGCTTCTGTTCTCCATCGTT 57.591 42.857 0.00 0.00 0.00 3.85
612 626 3.409026 AAAGCTTCTGTTCTCCATCGT 57.591 42.857 0.00 0.00 0.00 3.73
613 627 3.304559 CGTAAAGCTTCTGTTCTCCATCG 59.695 47.826 0.00 0.00 0.00 3.84
614 628 4.246458 ACGTAAAGCTTCTGTTCTCCATC 58.754 43.478 0.00 0.00 0.00 3.51
615 629 4.246458 GACGTAAAGCTTCTGTTCTCCAT 58.754 43.478 0.00 0.00 0.00 3.41
616 630 3.650139 GACGTAAAGCTTCTGTTCTCCA 58.350 45.455 0.00 0.00 0.00 3.86
617 631 2.662156 CGACGTAAAGCTTCTGTTCTCC 59.338 50.000 0.00 0.00 0.00 3.71
620 634 2.401351 ACCGACGTAAAGCTTCTGTTC 58.599 47.619 0.00 0.00 0.00 3.18
634 648 1.990563 GTTGTCTATGTTGGACCGACG 59.009 52.381 7.39 0.00 33.22 5.12
635 649 3.034721 TGTTGTCTATGTTGGACCGAC 57.965 47.619 4.73 4.73 33.22 4.79
655 673 1.002773 CTTGCCTTGTACGGGGTAGTT 59.997 52.381 6.79 0.00 0.00 2.24
658 676 1.555477 CCCTTGCCTTGTACGGGGTA 61.555 60.000 6.79 0.00 0.00 3.69
659 677 2.754375 CCTTGCCTTGTACGGGGT 59.246 61.111 6.79 0.00 0.00 4.95
660 678 1.555477 TACCCTTGCCTTGTACGGGG 61.555 60.000 4.96 0.00 39.27 5.73
664 682 1.353358 ACCCTTACCCTTGCCTTGTAC 59.647 52.381 0.00 0.00 0.00 2.90
665 683 1.631898 GACCCTTACCCTTGCCTTGTA 59.368 52.381 0.00 0.00 0.00 2.41
666 684 0.404426 GACCCTTACCCTTGCCTTGT 59.596 55.000 0.00 0.00 0.00 3.16
667 685 0.404040 TGACCCTTACCCTTGCCTTG 59.596 55.000 0.00 0.00 0.00 3.61
668 686 1.154430 TTGACCCTTACCCTTGCCTT 58.846 50.000 0.00 0.00 0.00 4.35
669 687 1.154430 TTTGACCCTTACCCTTGCCT 58.846 50.000 0.00 0.00 0.00 4.75
670 688 1.616865 GTTTTGACCCTTACCCTTGCC 59.383 52.381 0.00 0.00 0.00 4.52
671 689 2.296190 CTGTTTTGACCCTTACCCTTGC 59.704 50.000 0.00 0.00 0.00 4.01
672 690 3.821033 CTCTGTTTTGACCCTTACCCTTG 59.179 47.826 0.00 0.00 0.00 3.61
674 692 2.224793 GCTCTGTTTTGACCCTTACCCT 60.225 50.000 0.00 0.00 0.00 4.34
675 693 2.160205 GCTCTGTTTTGACCCTTACCC 58.840 52.381 0.00 0.00 0.00 3.69
679 697 1.322442 GCAGCTCTGTTTTGACCCTT 58.678 50.000 0.00 0.00 0.00 3.95
680 698 0.886490 CGCAGCTCTGTTTTGACCCT 60.886 55.000 0.00 0.00 0.00 4.34
682 700 0.235926 GTCGCAGCTCTGTTTTGACC 59.764 55.000 0.00 0.00 0.00 4.02
683 701 0.235926 GGTCGCAGCTCTGTTTTGAC 59.764 55.000 0.00 2.91 0.00 3.18
684 702 0.884704 GGGTCGCAGCTCTGTTTTGA 60.885 55.000 0.00 0.00 0.00 2.69
686 704 1.600916 GGGGTCGCAGCTCTGTTTT 60.601 57.895 0.00 0.00 0.00 2.43
688 706 2.925170 AGGGGTCGCAGCTCTGTT 60.925 61.111 0.00 0.00 0.00 3.16
690 708 3.073735 AGAGGGGTCGCAGCTCTG 61.074 66.667 0.00 0.00 0.00 3.35
691 709 2.757917 GAGAGGGGTCGCAGCTCT 60.758 66.667 0.00 0.00 0.00 4.09
693 711 2.757917 GAGAGAGGGGTCGCAGCT 60.758 66.667 0.00 0.00 0.00 4.24
694 712 3.844090 GGAGAGAGGGGTCGCAGC 61.844 72.222 0.00 0.00 0.00 5.25
695 713 2.043450 AGGAGAGAGGGGTCGCAG 60.043 66.667 0.00 0.00 0.00 5.18
696 714 2.043852 GAGGAGAGAGGGGTCGCA 60.044 66.667 0.00 0.00 0.00 5.10
697 715 2.835895 GGAGGAGAGAGGGGTCGC 60.836 72.222 0.00 0.00 0.00 5.19
698 716 2.517402 CGGAGGAGAGAGGGGTCG 60.517 72.222 0.00 0.00 0.00 4.79
699 717 2.835895 GCGGAGGAGAGAGGGGTC 60.836 72.222 0.00 0.00 0.00 4.46
700 718 4.467107 GGCGGAGGAGAGAGGGGT 62.467 72.222 0.00 0.00 0.00 4.95
711 729 4.680237 TGTCAACTGCGGGCGGAG 62.680 66.667 6.47 0.00 39.56 4.63
712 730 4.680237 CTGTCAACTGCGGGCGGA 62.680 66.667 6.47 0.00 0.00 5.54
713 731 4.988598 ACTGTCAACTGCGGGCGG 62.989 66.667 0.00 0.00 0.00 6.13
714 732 2.954753 GAACTGTCAACTGCGGGCG 61.955 63.158 0.00 0.00 0.00 6.13
715 733 2.617274 GGAACTGTCAACTGCGGGC 61.617 63.158 0.00 0.00 0.00 6.13
716 734 0.606401 ATGGAACTGTCAACTGCGGG 60.606 55.000 0.00 0.00 0.00 6.13
717 735 0.798776 GATGGAACTGTCAACTGCGG 59.201 55.000 0.00 0.00 0.00 5.69
718 736 0.439985 CGATGGAACTGTCAACTGCG 59.560 55.000 0.00 0.00 0.00 5.18
719 737 1.195448 CACGATGGAACTGTCAACTGC 59.805 52.381 0.00 0.00 0.00 4.40
720 738 1.195448 GCACGATGGAACTGTCAACTG 59.805 52.381 0.00 0.00 0.00 3.16
721 739 1.512926 GCACGATGGAACTGTCAACT 58.487 50.000 0.00 0.00 0.00 3.16
722 740 0.517316 GGCACGATGGAACTGTCAAC 59.483 55.000 0.00 0.00 0.00 3.18
723 741 0.605319 GGGCACGATGGAACTGTCAA 60.605 55.000 0.00 0.00 0.00 3.18
724 742 1.003839 GGGCACGATGGAACTGTCA 60.004 57.895 0.00 0.00 0.00 3.58
725 743 2.100631 CGGGCACGATGGAACTGTC 61.101 63.158 0.00 0.00 44.60 3.51
726 744 2.047274 CGGGCACGATGGAACTGT 60.047 61.111 0.00 0.00 44.60 3.55
727 745 2.264480 TCGGGCACGATGGAACTG 59.736 61.111 7.15 0.00 45.59 3.16
755 773 1.267806 TGTTCTCCGGTGTCTCGTTAC 59.732 52.381 0.00 0.00 0.00 2.50
820 840 6.020971 TCGTCGTGCTGAATGGTTATATAT 57.979 37.500 0.00 0.00 0.00 0.86
821 841 5.441709 TCGTCGTGCTGAATGGTTATATA 57.558 39.130 0.00 0.00 0.00 0.86
822 842 4.299155 CTCGTCGTGCTGAATGGTTATAT 58.701 43.478 0.00 0.00 0.00 0.86
823 843 3.490249 CCTCGTCGTGCTGAATGGTTATA 60.490 47.826 0.00 0.00 0.00 0.98
831 852 2.338620 CCACCTCGTCGTGCTGAA 59.661 61.111 0.00 0.00 32.10 3.02
832 853 3.680786 CCCACCTCGTCGTGCTGA 61.681 66.667 0.00 0.00 32.10 4.26
847 868 0.340208 TCTTCCTTCCTCCTCTCCCC 59.660 60.000 0.00 0.00 0.00 4.81
903 924 1.973812 GCAGCTCCGCTTTCCCTTT 60.974 57.895 0.00 0.00 36.40 3.11
1063 1092 2.669569 GCTGTTCCTGCGCTGGAA 60.670 61.111 36.23 36.23 43.16 3.53
1102 1131 2.294078 CCACCCGCTCCCTCTTCTT 61.294 63.158 0.00 0.00 0.00 2.52
1104 1133 3.003763 ACCACCCGCTCCCTCTTC 61.004 66.667 0.00 0.00 0.00 2.87
1105 1134 3.322466 CACCACCCGCTCCCTCTT 61.322 66.667 0.00 0.00 0.00 2.85
1108 1137 3.635869 ATACCACCACCCGCTCCCT 62.636 63.158 0.00 0.00 0.00 4.20
1109 1138 2.604299 GAATACCACCACCCGCTCCC 62.604 65.000 0.00 0.00 0.00 4.30
1110 1139 1.153229 GAATACCACCACCCGCTCC 60.153 63.158 0.00 0.00 0.00 4.70
1111 1140 0.462047 CAGAATACCACCACCCGCTC 60.462 60.000 0.00 0.00 0.00 5.03
1112 1141 1.198759 ACAGAATACCACCACCCGCT 61.199 55.000 0.00 0.00 0.00 5.52
1113 1142 0.322187 AACAGAATACCACCACCCGC 60.322 55.000 0.00 0.00 0.00 6.13
1114 1143 1.810151 CAAACAGAATACCACCACCCG 59.190 52.381 0.00 0.00 0.00 5.28
1128 1157 1.089920 CCCTTCCATCGCTCAAACAG 58.910 55.000 0.00 0.00 0.00 3.16
1435 1493 0.819259 AGCAAAAGCGCCTTGAGACA 60.819 50.000 20.68 0.00 0.00 3.41
1451 1509 8.673711 CCAATAGCTGTAATTAACAACTAAGCA 58.326 33.333 0.00 0.00 39.56 3.91
1512 1572 0.109781 CCACACGAAATCCCTTTGCG 60.110 55.000 0.00 0.00 0.00 4.85
1516 1576 0.328258 CTCCCCACACGAAATCCCTT 59.672 55.000 0.00 0.00 0.00 3.95
1517 1577 1.991230 CTCCCCACACGAAATCCCT 59.009 57.895 0.00 0.00 0.00 4.20
1532 1599 3.426568 GCCACTGCTTGACGCTCC 61.427 66.667 0.00 0.00 40.11 4.70
1548 1615 1.153249 TGTATTGGGCTGGCTACGC 60.153 57.895 0.00 0.00 0.00 4.42
1549 1616 0.814010 GGTGTATTGGGCTGGCTACG 60.814 60.000 0.00 0.00 0.00 3.51
1550 1617 0.254747 TGGTGTATTGGGCTGGCTAC 59.745 55.000 0.00 0.00 0.00 3.58
1551 1618 0.546122 CTGGTGTATTGGGCTGGCTA 59.454 55.000 0.00 0.00 0.00 3.93
1552 1619 1.304282 CTGGTGTATTGGGCTGGCT 59.696 57.895 0.00 0.00 0.00 4.75
1553 1620 1.754234 CCTGGTGTATTGGGCTGGC 60.754 63.158 0.00 0.00 0.00 4.85
1554 1621 1.076777 CCCTGGTGTATTGGGCTGG 60.077 63.158 0.00 0.00 33.88 4.85
1555 1622 0.680921 CACCCTGGTGTATTGGGCTG 60.681 60.000 8.20 0.00 44.56 4.85
1556 1623 1.691219 CACCCTGGTGTATTGGGCT 59.309 57.895 8.20 0.00 44.56 5.19
1557 1624 1.379843 CCACCCTGGTGTATTGGGC 60.380 63.158 14.89 0.00 44.56 5.36
1567 1634 6.806668 ATTTTTATTAATGGACCACCCTGG 57.193 37.500 0.00 0.00 45.02 4.45
1632 1699 8.911018 TCCCCATAGCTTGTATATAATGTAGT 57.089 34.615 0.00 0.00 0.00 2.73
1637 1704 9.700831 GGAATTTCCCCATAGCTTGTATATAAT 57.299 33.333 3.89 0.00 0.00 1.28
1638 1705 8.674173 TGGAATTTCCCCATAGCTTGTATATAA 58.326 33.333 12.90 0.00 35.03 0.98
1639 1706 8.225863 TGGAATTTCCCCATAGCTTGTATATA 57.774 34.615 12.90 0.00 35.03 0.86
1640 1707 7.102518 TGGAATTTCCCCATAGCTTGTATAT 57.897 36.000 12.90 0.00 35.03 0.86
1641 1708 6.467194 CCTGGAATTTCCCCATAGCTTGTATA 60.467 42.308 12.90 0.00 35.03 1.47
1642 1709 5.388654 CTGGAATTTCCCCATAGCTTGTAT 58.611 41.667 12.90 0.00 35.03 2.29
1643 1710 4.386312 CCTGGAATTTCCCCATAGCTTGTA 60.386 45.833 12.90 0.00 35.03 2.41
1644 1711 3.628257 CCTGGAATTTCCCCATAGCTTGT 60.628 47.826 12.90 0.00 35.03 3.16
1645 1712 2.961062 CCTGGAATTTCCCCATAGCTTG 59.039 50.000 12.90 0.00 35.03 4.01
1646 1713 2.091111 CCCTGGAATTTCCCCATAGCTT 60.091 50.000 12.90 0.00 35.03 3.74
1647 1714 1.500736 CCCTGGAATTTCCCCATAGCT 59.499 52.381 12.90 0.00 35.03 3.32
1648 1715 1.217942 ACCCTGGAATTTCCCCATAGC 59.782 52.381 12.90 0.00 35.03 2.97
1649 1716 2.424812 CCACCCTGGAATTTCCCCATAG 60.425 54.545 12.90 3.52 40.96 2.23
1650 1717 1.573376 CCACCCTGGAATTTCCCCATA 59.427 52.381 12.90 0.00 40.96 2.74
1651 1718 0.339510 CCACCCTGGAATTTCCCCAT 59.660 55.000 12.90 0.00 40.96 4.00
1652 1719 1.077298 ACCACCCTGGAATTTCCCCA 61.077 55.000 12.90 0.00 40.96 4.96
1653 1720 0.324368 GACCACCCTGGAATTTCCCC 60.324 60.000 12.90 0.00 40.96 4.81
1654 1721 0.324368 GGACCACCCTGGAATTTCCC 60.324 60.000 12.90 0.00 40.96 3.97
1655 1722 0.407918 TGGACCACCCTGGAATTTCC 59.592 55.000 8.59 8.59 40.96 3.13
1656 1723 2.102578 CATGGACCACCCTGGAATTTC 58.897 52.381 0.00 0.00 40.96 2.17
1657 1724 2.236489 CATGGACCACCCTGGAATTT 57.764 50.000 0.00 0.00 40.96 1.82
1673 1740 3.660571 TGGCCAGGGTGGTCCATG 61.661 66.667 0.00 0.00 42.76 3.66
1674 1741 3.661648 GTGGCCAGGGTGGTCCAT 61.662 66.667 5.11 0.00 42.76 3.41
1681 1748 4.760220 CTAGGGGGTGGCCAGGGT 62.760 72.222 5.11 0.00 0.00 4.34
1683 1750 3.714078 TAGCTAGGGGGTGGCCAGG 62.714 68.421 5.11 0.00 31.44 4.45
1684 1751 2.040884 TAGCTAGGGGGTGGCCAG 60.041 66.667 5.11 0.00 31.44 4.85
1685 1752 2.366435 GTAGCTAGGGGGTGGCCA 60.366 66.667 0.00 0.00 31.44 5.36
1686 1753 3.547513 CGTAGCTAGGGGGTGGCC 61.548 72.222 5.50 0.00 31.44 5.36
1716 1783 1.635817 ATGTATGTCAAGGCGCCCCT 61.636 55.000 26.15 8.08 45.77 4.79
1717 1784 0.751643 AATGTATGTCAAGGCGCCCC 60.752 55.000 26.15 9.61 0.00 5.80
1730 1797 6.519679 AGCAATGACACATGACAAATGTAT 57.480 33.333 0.00 0.00 0.00 2.29
1735 1802 5.658468 TGAAAAGCAATGACACATGACAAA 58.342 33.333 0.00 0.00 0.00 2.83
1736 1803 5.163530 ACTGAAAAGCAATGACACATGACAA 60.164 36.000 0.00 0.00 0.00 3.18
1738 1805 4.678287 CACTGAAAAGCAATGACACATGAC 59.322 41.667 0.00 0.00 0.00 3.06
1740 1807 3.427528 GCACTGAAAAGCAATGACACATG 59.572 43.478 0.00 0.00 0.00 3.21
1741 1808 3.645884 GCACTGAAAAGCAATGACACAT 58.354 40.909 0.00 0.00 0.00 3.21
1831 1902 1.577328 CTGCACATCACGGGTTGACC 61.577 60.000 1.98 0.00 36.92 4.02
1837 1908 1.742880 CAGTCCTGCACATCACGGG 60.743 63.158 0.00 0.00 34.63 5.28
1839 1910 1.730501 AATCAGTCCTGCACATCACG 58.269 50.000 0.00 0.00 0.00 4.35
1840 1911 3.076621 TGAAATCAGTCCTGCACATCAC 58.923 45.455 0.00 0.00 0.00 3.06
1843 1914 4.337555 GCTTATGAAATCAGTCCTGCACAT 59.662 41.667 0.00 0.00 0.00 3.21
1844 1915 3.691118 GCTTATGAAATCAGTCCTGCACA 59.309 43.478 0.00 0.00 0.00 4.57
1845 1916 3.065925 GGCTTATGAAATCAGTCCTGCAC 59.934 47.826 0.00 0.00 0.00 4.57
1846 1917 3.282021 GGCTTATGAAATCAGTCCTGCA 58.718 45.455 0.00 0.00 0.00 4.41
1847 1918 3.282021 TGGCTTATGAAATCAGTCCTGC 58.718 45.455 0.00 0.00 0.00 4.85
1848 1919 4.774124 TCTGGCTTATGAAATCAGTCCTG 58.226 43.478 0.00 0.00 0.00 3.86
1849 1920 5.441718 TTCTGGCTTATGAAATCAGTCCT 57.558 39.130 0.00 0.00 0.00 3.85
1850 1921 6.515272 TTTTCTGGCTTATGAAATCAGTCC 57.485 37.500 0.00 0.00 33.04 3.85
1851 1922 7.859875 GCTATTTTCTGGCTTATGAAATCAGTC 59.140 37.037 0.00 0.00 33.04 3.51
1852 1923 7.559170 AGCTATTTTCTGGCTTATGAAATCAGT 59.441 33.333 0.00 0.00 38.82 3.41
1908 1979 1.789464 GGTAAATGCGAGAGATGAGCG 59.211 52.381 0.00 0.00 0.00 5.03
1930 2001 0.880278 TGACTTCTGACCAGCAACGC 60.880 55.000 0.00 0.00 0.00 4.84
1933 2004 2.997980 TGTTTGACTTCTGACCAGCAA 58.002 42.857 0.00 0.00 0.00 3.91
1936 2007 5.567138 AACTTTGTTTGACTTCTGACCAG 57.433 39.130 0.00 0.00 0.00 4.00
1946 2017 3.816523 TGTCCGGGATAACTTTGTTTGAC 59.183 43.478 0.00 0.00 0.00 3.18
1954 2025 0.981183 TGCAGTGTCCGGGATAACTT 59.019 50.000 11.45 0.00 0.00 2.66
1976 2055 3.800833 AGATCCTGCATGCGGGCA 61.801 61.111 36.54 25.88 42.10 5.36
1996 2075 4.525487 TGCATCAAGAATTCTTCTGCCTTT 59.475 37.500 30.78 7.70 40.59 3.11
1997 2076 4.084287 TGCATCAAGAATTCTTCTGCCTT 58.916 39.130 30.78 8.30 40.59 4.35
1999 2078 4.421948 CTTGCATCAAGAATTCTTCTGCC 58.578 43.478 30.78 20.79 43.42 4.85
2038 2130 0.321653 CGAACCAGGGTTTCTCCAGG 60.322 60.000 4.99 0.00 38.60 4.45
2042 2134 0.037975 TACGCGAACCAGGGTTTCTC 60.038 55.000 15.93 0.00 38.60 2.87
2053 2145 1.411394 TACTGCAACAGTACGCGAAC 58.589 50.000 15.93 0.00 43.46 3.95
2054 2146 3.869747 TACTGCAACAGTACGCGAA 57.130 47.368 15.93 0.00 43.46 4.70
2079 2171 4.554363 CGTCGGCCTCCAGCGTAG 62.554 72.222 0.00 0.00 45.17 3.51
2082 2174 4.124351 TAACGTCGGCCTCCAGCG 62.124 66.667 0.00 0.16 45.17 5.18
2083 2175 2.508663 GTAACGTCGGCCTCCAGC 60.509 66.667 0.00 0.00 42.60 4.85
2084 2176 1.139095 GAGTAACGTCGGCCTCCAG 59.861 63.158 0.00 0.00 0.00 3.86
2085 2177 2.693762 CGAGTAACGTCGGCCTCCA 61.694 63.158 0.00 0.00 36.26 3.86
2086 2178 2.101770 CGAGTAACGTCGGCCTCC 59.898 66.667 0.00 0.00 36.26 4.30
2197 2300 2.502080 CTGCTCGTCGGACGTCAC 60.502 66.667 27.53 18.54 43.14 3.67
2296 2403 6.480651 TCTCTGCTATATATCTTCCGACGATC 59.519 42.308 0.00 0.00 0.00 3.69
2298 2405 5.581479 GTCTCTGCTATATATCTTCCGACGA 59.419 44.000 0.00 0.00 0.00 4.20
2310 2417 5.414454 GGAATCGACTCTGTCTCTGCTATAT 59.586 44.000 0.00 0.00 0.00 0.86
2311 2418 4.757657 GGAATCGACTCTGTCTCTGCTATA 59.242 45.833 0.00 0.00 0.00 1.31
2312 2419 3.568007 GGAATCGACTCTGTCTCTGCTAT 59.432 47.826 0.00 0.00 0.00 2.97
2313 2420 2.946329 GGAATCGACTCTGTCTCTGCTA 59.054 50.000 0.00 0.00 0.00 3.49
2314 2421 1.748493 GGAATCGACTCTGTCTCTGCT 59.252 52.381 0.00 0.00 0.00 4.24
2315 2422 1.202359 GGGAATCGACTCTGTCTCTGC 60.202 57.143 0.00 0.00 0.00 4.26
2316 2423 1.064803 CGGGAATCGACTCTGTCTCTG 59.935 57.143 0.00 0.00 42.43 3.35
2317 2424 1.340211 ACGGGAATCGACTCTGTCTCT 60.340 52.381 0.00 0.00 42.43 3.10
2318 2425 1.096416 ACGGGAATCGACTCTGTCTC 58.904 55.000 0.00 0.00 42.43 3.36
2319 2426 1.202582 CAACGGGAATCGACTCTGTCT 59.797 52.381 0.00 0.00 42.43 3.41
2320 2427 1.630148 CAACGGGAATCGACTCTGTC 58.370 55.000 0.00 0.00 42.43 3.51
2321 2428 0.246635 CCAACGGGAATCGACTCTGT 59.753 55.000 0.00 0.00 42.43 3.41
2322 2429 0.530744 TCCAACGGGAATCGACTCTG 59.469 55.000 0.00 0.00 41.32 3.35
2323 2430 2.971676 TCCAACGGGAATCGACTCT 58.028 52.632 0.00 0.00 41.32 3.24
2332 2439 2.281484 GCAGTGCTTCCAACGGGA 60.281 61.111 8.18 0.00 43.03 5.14
2333 2440 1.973281 ATGCAGTGCTTCCAACGGG 60.973 57.895 17.60 0.00 0.00 5.28
2334 2441 1.210931 CATGCAGTGCTTCCAACGG 59.789 57.895 17.60 0.00 0.00 4.44
2335 2442 1.210931 CCATGCAGTGCTTCCAACG 59.789 57.895 17.60 0.00 0.00 4.10
2336 2443 1.533625 TACCATGCAGTGCTTCCAAC 58.466 50.000 17.60 0.00 0.00 3.77
2337 2444 2.161855 CTTACCATGCAGTGCTTCCAA 58.838 47.619 17.60 3.39 0.00 3.53
2338 2445 1.614051 CCTTACCATGCAGTGCTTCCA 60.614 52.381 17.60 0.00 0.00 3.53
2339 2446 1.098050 CCTTACCATGCAGTGCTTCC 58.902 55.000 17.60 0.00 0.00 3.46
2340 2447 0.453390 GCCTTACCATGCAGTGCTTC 59.547 55.000 17.60 0.00 0.00 3.86
2341 2448 0.038744 AGCCTTACCATGCAGTGCTT 59.961 50.000 17.60 7.26 0.00 3.91
2342 2449 0.911769 TAGCCTTACCATGCAGTGCT 59.088 50.000 17.60 0.00 0.00 4.40
2343 2450 1.972872 ATAGCCTTACCATGCAGTGC 58.027 50.000 8.58 8.58 0.00 4.40
2344 2451 4.005650 CCATATAGCCTTACCATGCAGTG 58.994 47.826 0.00 0.00 0.00 3.66
2345 2452 3.652869 ACCATATAGCCTTACCATGCAGT 59.347 43.478 0.00 0.00 0.00 4.40
2346 2453 4.256920 GACCATATAGCCTTACCATGCAG 58.743 47.826 0.00 0.00 0.00 4.41
2347 2454 3.650461 TGACCATATAGCCTTACCATGCA 59.350 43.478 0.00 0.00 0.00 3.96
2348 2455 4.256920 CTGACCATATAGCCTTACCATGC 58.743 47.826 0.00 0.00 0.00 4.06
2349 2456 5.012046 TCACTGACCATATAGCCTTACCATG 59.988 44.000 0.00 0.00 0.00 3.66
2350 2457 5.155161 TCACTGACCATATAGCCTTACCAT 58.845 41.667 0.00 0.00 0.00 3.55
2351 2458 4.552674 TCACTGACCATATAGCCTTACCA 58.447 43.478 0.00 0.00 0.00 3.25
2352 2459 5.546621 TTCACTGACCATATAGCCTTACC 57.453 43.478 0.00 0.00 0.00 2.85
2353 2460 6.073003 GCATTTCACTGACCATATAGCCTTAC 60.073 42.308 0.00 0.00 0.00 2.34
2354 2461 5.997746 GCATTTCACTGACCATATAGCCTTA 59.002 40.000 0.00 0.00 0.00 2.69
2355 2462 4.823989 GCATTTCACTGACCATATAGCCTT 59.176 41.667 0.00 0.00 0.00 4.35
2356 2463 4.103785 AGCATTTCACTGACCATATAGCCT 59.896 41.667 0.00 0.00 0.00 4.58
2357 2464 4.392940 AGCATTTCACTGACCATATAGCC 58.607 43.478 0.00 0.00 0.00 3.93
2358 2465 4.151335 CGAGCATTTCACTGACCATATAGC 59.849 45.833 0.00 0.00 0.00 2.97
2359 2466 5.292765 ACGAGCATTTCACTGACCATATAG 58.707 41.667 0.00 0.00 0.00 1.31
2360 2467 5.276461 ACGAGCATTTCACTGACCATATA 57.724 39.130 0.00 0.00 0.00 0.86
2361 2468 4.142609 ACGAGCATTTCACTGACCATAT 57.857 40.909 0.00 0.00 0.00 1.78
2362 2469 3.610040 ACGAGCATTTCACTGACCATA 57.390 42.857 0.00 0.00 0.00 2.74
2363 2470 2.479566 ACGAGCATTTCACTGACCAT 57.520 45.000 0.00 0.00 0.00 3.55
2364 2471 2.254546 AACGAGCATTTCACTGACCA 57.745 45.000 0.00 0.00 0.00 4.02
2365 2472 2.548057 TGAAACGAGCATTTCACTGACC 59.452 45.455 6.69 0.00 42.32 4.02
2366 2473 3.494626 TCTGAAACGAGCATTTCACTGAC 59.505 43.478 6.69 0.00 42.32 3.51
2367 2474 3.494626 GTCTGAAACGAGCATTTCACTGA 59.505 43.478 6.69 2.73 42.32 3.41
2368 2475 3.364366 GGTCTGAAACGAGCATTTCACTG 60.364 47.826 6.69 0.81 42.32 3.66
2369 2476 2.808543 GGTCTGAAACGAGCATTTCACT 59.191 45.455 6.69 0.00 42.32 3.41
2370 2477 2.411547 CGGTCTGAAACGAGCATTTCAC 60.412 50.000 6.69 0.50 42.32 3.18
2371 2478 1.798223 CGGTCTGAAACGAGCATTTCA 59.202 47.619 9.57 9.57 44.40 2.69
2372 2479 2.066262 TCGGTCTGAAACGAGCATTTC 58.934 47.619 0.00 0.00 38.77 2.17
2373 2480 2.163818 TCGGTCTGAAACGAGCATTT 57.836 45.000 0.00 0.00 34.67 2.32
2374 2481 2.386661 ATCGGTCTGAAACGAGCATT 57.613 45.000 10.68 0.00 42.89 3.56
2375 2482 2.223829 CCTATCGGTCTGAAACGAGCAT 60.224 50.000 10.68 0.00 42.89 3.79
2376 2483 1.134367 CCTATCGGTCTGAAACGAGCA 59.866 52.381 10.68 2.40 42.89 4.26
2377 2484 1.404391 TCCTATCGGTCTGAAACGAGC 59.596 52.381 10.68 0.00 42.89 5.03
2378 2485 3.377485 TCTTCCTATCGGTCTGAAACGAG 59.623 47.826 10.68 0.42 42.89 4.18
2379 2486 3.349927 TCTTCCTATCGGTCTGAAACGA 58.650 45.455 7.94 7.94 43.85 3.85
2380 2487 3.777465 TCTTCCTATCGGTCTGAAACG 57.223 47.619 0.00 0.00 0.00 3.60
2381 2488 4.182339 GGTTCTTCCTATCGGTCTGAAAC 58.818 47.826 0.00 0.00 0.00 2.78
2382 2489 3.119245 CGGTTCTTCCTATCGGTCTGAAA 60.119 47.826 0.00 0.00 0.00 2.69
2383 2490 2.426024 CGGTTCTTCCTATCGGTCTGAA 59.574 50.000 0.00 0.00 0.00 3.02
2384 2491 2.022195 CGGTTCTTCCTATCGGTCTGA 58.978 52.381 0.00 0.00 0.00 3.27
2385 2492 1.536284 GCGGTTCTTCCTATCGGTCTG 60.536 57.143 0.00 0.00 0.00 3.51
2386 2493 0.745468 GCGGTTCTTCCTATCGGTCT 59.255 55.000 0.00 0.00 0.00 3.85
2387 2494 0.458669 TGCGGTTCTTCCTATCGGTC 59.541 55.000 0.00 0.00 0.00 4.79
2388 2495 0.460311 CTGCGGTTCTTCCTATCGGT 59.540 55.000 0.00 0.00 0.00 4.69
2389 2496 0.744874 TCTGCGGTTCTTCCTATCGG 59.255 55.000 0.00 0.00 0.00 4.18
2390 2497 2.802787 ATCTGCGGTTCTTCCTATCG 57.197 50.000 0.00 0.00 0.00 2.92
2391 2498 5.819825 AAAAATCTGCGGTTCTTCCTATC 57.180 39.130 0.00 0.00 0.00 2.08
2418 2525 2.592993 TTCGCCAGGGGTCCTTCTG 61.593 63.158 2.89 5.99 0.00 3.02
2419 2526 2.203938 TTCGCCAGGGGTCCTTCT 60.204 61.111 2.89 0.00 0.00 2.85
2420 2527 2.046217 GTTCGCCAGGGGTCCTTC 60.046 66.667 2.89 0.00 0.00 3.46
2421 2528 2.852075 TGTTCGCCAGGGGTCCTT 60.852 61.111 2.89 0.00 0.00 3.36
2422 2529 3.322466 CTGTTCGCCAGGGGTCCT 61.322 66.667 2.89 0.00 37.54 3.85
2423 2530 2.198304 ATTCTGTTCGCCAGGGGTCC 62.198 60.000 2.89 0.00 41.83 4.46
2424 2531 0.322546 AATTCTGTTCGCCAGGGGTC 60.323 55.000 2.89 0.00 41.83 4.46
2425 2532 0.609131 CAATTCTGTTCGCCAGGGGT 60.609 55.000 2.89 0.00 41.83 4.95
2426 2533 0.609131 ACAATTCTGTTCGCCAGGGG 60.609 55.000 0.00 0.00 41.83 4.79
2427 2534 0.804989 GACAATTCTGTTCGCCAGGG 59.195 55.000 2.66 0.00 41.83 4.45
2428 2535 1.522668 TGACAATTCTGTTCGCCAGG 58.477 50.000 2.66 0.00 41.83 4.45
2429 2536 3.624326 TTTGACAATTCTGTTCGCCAG 57.376 42.857 0.00 0.00 42.97 4.85
2430 2537 4.358851 CTTTTTGACAATTCTGTTCGCCA 58.641 39.130 0.00 0.00 35.30 5.69
2431 2538 3.735746 CCTTTTTGACAATTCTGTTCGCC 59.264 43.478 0.00 0.00 35.30 5.54
2432 2539 4.441087 GTCCTTTTTGACAATTCTGTTCGC 59.559 41.667 0.00 0.00 35.30 4.70
2433 2540 4.976116 GGTCCTTTTTGACAATTCTGTTCG 59.024 41.667 0.00 0.00 35.30 3.95
2434 2541 5.748630 GTGGTCCTTTTTGACAATTCTGTTC 59.251 40.000 0.00 0.00 35.30 3.18
2435 2542 5.422012 AGTGGTCCTTTTTGACAATTCTGTT 59.578 36.000 0.00 0.00 35.30 3.16
2436 2543 4.956075 AGTGGTCCTTTTTGACAATTCTGT 59.044 37.500 0.00 0.00 38.98 3.41
2437 2544 5.067674 TGAGTGGTCCTTTTTGACAATTCTG 59.932 40.000 0.00 0.00 36.97 3.02
2438 2545 5.200483 TGAGTGGTCCTTTTTGACAATTCT 58.800 37.500 0.00 0.00 36.97 2.40
2439 2546 5.514274 TGAGTGGTCCTTTTTGACAATTC 57.486 39.130 0.00 0.00 36.97 2.17
2440 2547 4.202151 GCTGAGTGGTCCTTTTTGACAATT 60.202 41.667 0.00 0.00 36.97 2.32
2441 2548 3.319122 GCTGAGTGGTCCTTTTTGACAAT 59.681 43.478 0.00 0.00 36.97 2.71
2442 2549 2.687935 GCTGAGTGGTCCTTTTTGACAA 59.312 45.455 0.00 0.00 36.97 3.18
2443 2550 2.297701 GCTGAGTGGTCCTTTTTGACA 58.702 47.619 0.00 0.00 36.97 3.58
2444 2551 1.264288 CGCTGAGTGGTCCTTTTTGAC 59.736 52.381 0.00 0.00 34.42 3.18
2445 2552 1.140052 TCGCTGAGTGGTCCTTTTTGA 59.860 47.619 0.00 0.00 0.00 2.69
2446 2553 1.593196 TCGCTGAGTGGTCCTTTTTG 58.407 50.000 0.00 0.00 0.00 2.44
2447 2554 2.341846 TTCGCTGAGTGGTCCTTTTT 57.658 45.000 0.00 0.00 0.00 1.94
2448 2555 2.341846 TTTCGCTGAGTGGTCCTTTT 57.658 45.000 0.00 0.00 0.00 2.27
2449 2556 1.947456 GTTTTCGCTGAGTGGTCCTTT 59.053 47.619 0.00 0.00 0.00 3.11
2450 2557 1.141053 AGTTTTCGCTGAGTGGTCCTT 59.859 47.619 0.00 0.00 0.00 3.36
2451 2558 0.759346 AGTTTTCGCTGAGTGGTCCT 59.241 50.000 0.00 0.00 0.00 3.85
2452 2559 1.594331 AAGTTTTCGCTGAGTGGTCC 58.406 50.000 0.00 0.00 0.00 4.46
2453 2560 2.612212 TCAAAGTTTTCGCTGAGTGGTC 59.388 45.455 0.00 0.00 0.00 4.02
2454 2561 2.639065 TCAAAGTTTTCGCTGAGTGGT 58.361 42.857 0.00 0.00 0.00 4.16
2455 2562 3.904136 ATCAAAGTTTTCGCTGAGTGG 57.096 42.857 0.00 0.00 0.00 4.00
2456 2563 6.360681 CCTTTTATCAAAGTTTTCGCTGAGTG 59.639 38.462 0.00 0.00 38.22 3.51
2457 2564 6.438763 CCTTTTATCAAAGTTTTCGCTGAGT 58.561 36.000 0.00 0.00 38.22 3.41
2458 2565 5.858581 CCCTTTTATCAAAGTTTTCGCTGAG 59.141 40.000 0.00 0.00 38.22 3.35
2459 2566 5.533154 TCCCTTTTATCAAAGTTTTCGCTGA 59.467 36.000 0.00 0.00 38.22 4.26
2460 2567 5.629435 GTCCCTTTTATCAAAGTTTTCGCTG 59.371 40.000 0.00 0.00 38.22 5.18
2461 2568 5.278808 GGTCCCTTTTATCAAAGTTTTCGCT 60.279 40.000 0.00 0.00 38.22 4.93
2462 2569 4.921515 GGTCCCTTTTATCAAAGTTTTCGC 59.078 41.667 0.00 0.00 38.22 4.70
2463 2570 6.327279 AGGTCCCTTTTATCAAAGTTTTCG 57.673 37.500 0.00 0.00 38.22 3.46
2464 2571 6.493802 AGGAGGTCCCTTTTATCAAAGTTTTC 59.506 38.462 0.00 0.00 44.85 2.29
2465 2572 6.382087 AGGAGGTCCCTTTTATCAAAGTTTT 58.618 36.000 0.00 0.00 44.85 2.43
2466 2573 5.965486 AGGAGGTCCCTTTTATCAAAGTTT 58.035 37.500 0.00 0.00 44.85 2.66
2467 2574 5.600669 AGGAGGTCCCTTTTATCAAAGTT 57.399 39.130 0.00 0.00 44.85 2.66
2480 2587 3.450115 CACGGTCGAGGAGGTCCC 61.450 72.222 0.00 0.00 36.42 4.46
2481 2588 3.450115 CCACGGTCGAGGAGGTCC 61.450 72.222 0.58 0.00 0.00 4.46
2482 2589 4.131088 GCCACGGTCGAGGAGGTC 62.131 72.222 10.81 0.00 0.00 3.85
2503 2610 4.742201 ATGTCGTCTGCCGCGCTT 62.742 61.111 5.56 0.00 36.19 4.68
2506 2613 3.842126 CACATGTCGTCTGCCGCG 61.842 66.667 0.00 0.00 36.19 6.46
2507 2614 2.730672 GACACATGTCGTCTGCCGC 61.731 63.158 16.43 0.00 35.12 6.53
2508 2615 3.463505 GACACATGTCGTCTGCCG 58.536 61.111 16.43 0.00 35.12 5.69
2516 2623 2.680913 GCGGCAGGTGACACATGTC 61.681 63.158 20.34 17.61 44.97 3.06
2517 2624 2.669569 GCGGCAGGTGACACATGT 60.670 61.111 20.34 0.00 31.66 3.21
2518 2625 3.434319 GGCGGCAGGTGACACATG 61.434 66.667 15.71 15.71 32.28 3.21
2519 2626 3.952508 TGGCGGCAGGTGACACAT 61.953 61.111 7.97 0.00 0.00 3.21
2520 2627 4.927782 GTGGCGGCAGGTGACACA 62.928 66.667 13.91 0.00 32.58 3.72
2548 2655 3.861263 CGTTTTAGCCGGCTCGCC 61.861 66.667 36.73 18.30 0.00 5.54
2549 2656 3.116531 ACGTTTTAGCCGGCTCGC 61.117 61.111 36.73 19.83 0.00 5.03
2550 2657 1.286354 TTCACGTTTTAGCCGGCTCG 61.286 55.000 36.73 31.35 0.00 5.03
2551 2658 1.062148 GATTCACGTTTTAGCCGGCTC 59.938 52.381 36.73 18.39 0.00 4.70
2552 2659 1.084289 GATTCACGTTTTAGCCGGCT 58.916 50.000 34.85 34.85 0.00 5.52
2553 2660 0.800012 TGATTCACGTTTTAGCCGGC 59.200 50.000 21.89 21.89 0.00 6.13
2554 2661 1.801771 TGTGATTCACGTTTTAGCCGG 59.198 47.619 11.97 0.00 37.14 6.13
2555 2662 2.834689 GTGTGATTCACGTTTTAGCCG 58.165 47.619 11.97 0.00 37.14 5.52
2565 2672 4.826600 GCGCACTGTGTGATTCAC 57.173 55.556 24.33 9.93 46.31 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.