Multiple sequence alignment - TraesCS2D01G181100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G181100 chr2D 100.000 2522 0 0 1 2522 125452590 125450069 0.000000e+00 4658.0
1 TraesCS2D01G181100 chr2B 93.526 1313 43 17 1 1296 178776707 178775420 0.000000e+00 1916.0
2 TraesCS2D01G181100 chr2B 91.182 567 30 8 1290 1839 178775384 178774821 0.000000e+00 752.0
3 TraesCS2D01G181100 chr2B 92.727 55 3 1 1054 1107 178775438 178775384 7.480000e-11 78.7
4 TraesCS2D01G181100 chr2A 89.500 1381 69 30 651 1994 131850927 131849586 0.000000e+00 1677.0
5 TraesCS2D01G181100 chr2A 92.500 280 20 1 13 292 131852315 131852037 1.410000e-107 399.0
6 TraesCS2D01G181100 chr2A 87.831 189 13 10 460 642 131851391 131851207 1.970000e-51 213.0
7 TraesCS2D01G181100 chr2A 88.889 171 13 6 288 455 131851662 131851495 3.290000e-49 206.0
8 TraesCS2D01G181100 chr2A 96.154 52 2 0 1991 2042 131849366 131849315 4.470000e-13 86.1
9 TraesCS2D01G181100 chr5A 88.079 302 26 6 922 1221 219364693 219364400 1.440000e-92 350.0
10 TraesCS2D01G181100 chr6B 89.241 158 16 1 1309 1465 409345211 409345368 1.980000e-46 196.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G181100 chr2D 125450069 125452590 2521 True 4658.000000 4658 100.000000 1 2522 1 chr2D.!!$R1 2521
1 TraesCS2D01G181100 chr2B 178774821 178776707 1886 True 915.566667 1916 92.478333 1 1839 3 chr2B.!!$R1 1838
2 TraesCS2D01G181100 chr2A 131849315 131852315 3000 True 516.220000 1677 90.974800 13 2042 5 chr2A.!!$R1 2029

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
253 254 0.385751 ATGCACGTACGGATCCTGAG 59.614 55.0 21.06 1.02 0.0 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2149 3228 0.034477 CTACCGGTGCCCATTCCTTT 60.034 55.0 19.93 0.0 0.0 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
253 254 0.385751 ATGCACGTACGGATCCTGAG 59.614 55.000 21.06 1.02 0.00 3.35
357 738 1.081892 CACTTTGGTGGATGAGCTCG 58.918 55.000 9.64 0.00 39.59 5.03
358 739 0.674895 ACTTTGGTGGATGAGCTCGC 60.675 55.000 9.64 3.37 0.00 5.03
578 1062 2.926200 CTCGACTGTAACTGCCTCAATG 59.074 50.000 0.00 0.00 0.00 2.82
589 1073 5.391312 ACTGCCTCAATGTGGAATAAAAC 57.609 39.130 5.41 0.00 0.00 2.43
726 1491 4.090057 GGTGCTTTCGGCGAGTGC 62.090 66.667 22.85 22.85 45.43 4.40
743 1515 3.834799 CGGACGTAGGGACCAGCC 61.835 72.222 0.00 0.00 0.00 4.85
777 1549 2.675348 GTCGCCTCTTTCCTCATCTTTG 59.325 50.000 0.00 0.00 0.00 2.77
844 1617 7.979537 TCCAACGTAAAGTCGATAGTAGTACTA 59.020 37.037 12.38 12.38 34.82 1.82
845 1618 8.272176 CCAACGTAAAGTCGATAGTAGTACTAG 58.728 40.741 15.08 3.60 33.66 2.57
848 1621 9.672086 ACGTAAAGTCGATAGTAGTACTAGTAG 57.328 37.037 19.63 9.69 33.66 2.57
849 1622 9.672086 CGTAAAGTCGATAGTAGTACTAGTAGT 57.328 37.037 19.63 14.57 33.66 2.73
877 1650 0.443869 TACGTAGTCAAGGTCGTCGC 59.556 55.000 0.00 0.00 43.93 5.19
893 1666 3.072211 CGTCGCCTAGGTATAGATCACA 58.928 50.000 11.31 0.00 0.00 3.58
912 1685 5.538118 TCACATTCGTCGCTATAAATCCAT 58.462 37.500 0.00 0.00 0.00 3.41
920 1693 3.253188 TCGCTATAAATCCATGCTTTGCC 59.747 43.478 0.00 0.00 0.00 4.52
922 1695 4.261741 CGCTATAAATCCATGCTTTGCCTT 60.262 41.667 0.00 0.00 0.00 4.35
924 1697 2.103537 AAATCCATGCTTTGCCTTGC 57.896 45.000 0.00 0.00 0.00 4.01
925 1698 1.272807 AATCCATGCTTTGCCTTGCT 58.727 45.000 0.00 0.00 0.00 3.91
931 1704 0.819259 TGCTTTGCCTTGCTTCGTCT 60.819 50.000 0.00 0.00 0.00 4.18
932 1705 1.156736 GCTTTGCCTTGCTTCGTCTA 58.843 50.000 0.00 0.00 0.00 2.59
933 1706 1.740025 GCTTTGCCTTGCTTCGTCTAT 59.260 47.619 0.00 0.00 0.00 1.98
934 1707 2.223135 GCTTTGCCTTGCTTCGTCTATC 60.223 50.000 0.00 0.00 0.00 2.08
1008 1781 0.321653 AACCAGGCGAGATGAACACC 60.322 55.000 0.00 0.00 0.00 4.16
1078 1851 4.988716 TGGCCTCCACCGTCTCGT 62.989 66.667 3.32 0.00 0.00 4.18
1411 2229 1.227943 GCCATGATGAAGGCGCCTA 60.228 57.895 33.07 16.93 41.70 3.93
1628 2463 5.030147 TGGTGGTTCATTCCATCTAGTACT 58.970 41.667 0.00 0.00 39.19 2.73
1658 2497 3.020237 GCCGTGGGAGGGAGAAGAC 62.020 68.421 0.00 0.00 0.00 3.01
1687 2529 0.249073 ATAAGCGCTGCCTCGTACTG 60.249 55.000 12.58 0.00 0.00 2.74
1695 2537 3.007635 GCTGCCTCGTACTGGTATTTTT 58.992 45.455 4.14 0.00 0.00 1.94
1705 2547 7.802738 TCGTACTGGTATTTTTCATTGTTCTG 58.197 34.615 0.00 0.00 0.00 3.02
1725 2567 3.023119 TGGTCATTGTGTTCTGTTTGCT 58.977 40.909 0.00 0.00 0.00 3.91
1737 2579 7.609918 TGTGTTCTGTTTGCTATATTATGGTGT 59.390 33.333 0.00 0.00 0.00 4.16
1789 2638 3.686241 TGCTGTATTCTCAGTTCATGTGC 59.314 43.478 0.00 0.00 37.70 4.57
1830 2686 8.539770 TTGTTATGATTCTGTTGTCTCTTCTC 57.460 34.615 0.00 0.00 0.00 2.87
1836 2692 8.275015 TGATTCTGTTGTCTCTTCTCTAGTAG 57.725 38.462 0.00 0.00 0.00 2.57
1849 2705 9.739276 CTCTTCTCTAGTAGTCCATCTGAATAT 57.261 37.037 0.00 0.00 0.00 1.28
1850 2706 9.733556 TCTTCTCTAGTAGTCCATCTGAATATC 57.266 37.037 0.00 0.00 0.00 1.63
1851 2707 8.871629 TTCTCTAGTAGTCCATCTGAATATCC 57.128 38.462 0.00 0.00 0.00 2.59
1852 2708 7.106890 TCTCTAGTAGTCCATCTGAATATCCG 58.893 42.308 0.00 0.00 0.00 4.18
1853 2709 7.017319 TCTAGTAGTCCATCTGAATATCCGA 57.983 40.000 0.00 0.00 0.00 4.55
1854 2710 7.634718 TCTAGTAGTCCATCTGAATATCCGAT 58.365 38.462 0.00 0.00 0.00 4.18
1855 2711 6.522625 AGTAGTCCATCTGAATATCCGATG 57.477 41.667 5.18 5.18 35.48 3.84
1862 2718 5.975282 CATCTGAATATCCGATGGATCAGT 58.025 41.667 12.33 1.75 42.11 3.41
1863 2719 5.397142 TCTGAATATCCGATGGATCAGTG 57.603 43.478 12.33 0.00 42.11 3.66
1864 2720 5.079643 TCTGAATATCCGATGGATCAGTGA 58.920 41.667 12.33 0.00 42.11 3.41
1865 2721 5.539955 TCTGAATATCCGATGGATCAGTGAA 59.460 40.000 12.33 0.00 42.11 3.18
1866 2722 5.541845 TGAATATCCGATGGATCAGTGAAC 58.458 41.667 0.71 0.00 42.11 3.18
1867 2723 2.918712 ATCCGATGGATCAGTGAACC 57.081 50.000 12.38 12.38 38.09 3.62
1868 2724 1.866015 TCCGATGGATCAGTGAACCT 58.134 50.000 19.17 6.12 0.00 3.50
1869 2725 3.026707 TCCGATGGATCAGTGAACCTA 57.973 47.619 19.17 7.37 0.00 3.08
1870 2726 3.371034 TCCGATGGATCAGTGAACCTAA 58.629 45.455 19.17 1.65 0.00 2.69
1871 2727 3.967326 TCCGATGGATCAGTGAACCTAAT 59.033 43.478 19.17 6.49 0.00 1.73
1872 2728 5.144832 TCCGATGGATCAGTGAACCTAATA 58.855 41.667 19.17 0.58 0.00 0.98
1894 2750 2.835156 TCCGATGGAGTACATGGTTTCA 59.165 45.455 0.00 0.00 40.72 2.69
1926 2782 1.542030 GGCAGATGACTACGGATCGAT 59.458 52.381 0.00 0.00 0.00 3.59
1936 2792 4.442706 ACTACGGATCGATGCAGAAAATT 58.557 39.130 17.54 0.00 0.00 1.82
1944 2800 2.444351 GATGCAGAAAATTCGCGGAAG 58.556 47.619 6.13 0.00 32.24 3.46
1946 2802 1.606668 TGCAGAAAATTCGCGGAAGTT 59.393 42.857 6.13 1.99 31.06 2.66
1948 2804 3.120338 TGCAGAAAATTCGCGGAAGTTAG 60.120 43.478 6.13 1.14 29.66 2.34
1954 2810 0.320073 TTCGCGGAAGTTAGGGTGTG 60.320 55.000 6.13 0.00 0.00 3.82
1964 2820 5.644206 GGAAGTTAGGGTGTGAAAGAATCTC 59.356 44.000 0.00 0.00 0.00 2.75
2024 3103 9.684448 GGAAAGAGGTAAAAGAATCTTTTTCTG 57.316 33.333 23.77 0.00 40.97 3.02
2042 3121 8.809159 TTTTTCTGATCGATCTATCTAAGCTG 57.191 34.615 25.02 1.72 0.00 4.24
2043 3122 7.751768 TTTCTGATCGATCTATCTAAGCTGA 57.248 36.000 25.02 4.02 0.00 4.26
2044 3123 6.983474 TCTGATCGATCTATCTAAGCTGAG 57.017 41.667 25.02 10.24 0.00 3.35
2045 3124 6.706295 TCTGATCGATCTATCTAAGCTGAGA 58.294 40.000 25.02 2.34 0.00 3.27
2046 3125 7.164803 TCTGATCGATCTATCTAAGCTGAGAA 58.835 38.462 25.02 0.00 0.00 2.87
2047 3126 7.663493 TCTGATCGATCTATCTAAGCTGAGAAA 59.337 37.037 25.02 0.00 0.00 2.52
2048 3127 7.815641 TGATCGATCTATCTAAGCTGAGAAAG 58.184 38.462 25.02 0.00 0.00 2.62
2049 3128 7.663493 TGATCGATCTATCTAAGCTGAGAAAGA 59.337 37.037 25.02 0.00 0.00 2.52
2050 3129 7.809546 TCGATCTATCTAAGCTGAGAAAGAA 57.190 36.000 4.43 0.00 0.00 2.52
2051 3130 8.226819 TCGATCTATCTAAGCTGAGAAAGAAA 57.773 34.615 4.43 0.00 0.00 2.52
2052 3131 8.687242 TCGATCTATCTAAGCTGAGAAAGAAAA 58.313 33.333 4.43 0.00 0.00 2.29
2053 3132 8.967218 CGATCTATCTAAGCTGAGAAAGAAAAG 58.033 37.037 4.43 0.00 0.00 2.27
2059 3138 8.738645 TCTAAGCTGAGAAAGAAAAGAAAAGT 57.261 30.769 0.00 0.00 0.00 2.66
2060 3139 9.178758 TCTAAGCTGAGAAAGAAAAGAAAAGTT 57.821 29.630 0.00 0.00 0.00 2.66
2073 3152 8.337532 AGAAAAGAAAAGTTAAAACATGCATGC 58.662 29.630 26.53 11.82 0.00 4.06
2074 3153 7.551035 AAAGAAAAGTTAAAACATGCATGCA 57.449 28.000 26.53 25.04 0.00 3.96
2075 3154 6.529463 AGAAAAGTTAAAACATGCATGCAC 57.471 33.333 25.37 14.55 0.00 4.57
2076 3155 4.970472 AAAGTTAAAACATGCATGCACG 57.030 36.364 25.37 19.13 0.00 5.34
2077 3156 2.327568 AGTTAAAACATGCATGCACGC 58.672 42.857 25.37 11.76 0.00 5.34
2078 3157 2.030007 AGTTAAAACATGCATGCACGCT 60.030 40.909 25.37 2.09 0.00 5.07
2079 3158 1.979897 TAAAACATGCATGCACGCTG 58.020 45.000 25.37 20.11 0.00 5.18
2080 3159 1.286354 AAAACATGCATGCACGCTGC 61.286 50.000 25.37 4.87 45.29 5.25
2092 3171 4.628160 CGCTGCACGTACGGATAT 57.372 55.556 21.06 0.00 36.87 1.63
2093 3172 3.759550 CGCTGCACGTACGGATATA 57.240 52.632 21.06 0.11 36.87 0.86
2094 3173 1.324718 CGCTGCACGTACGGATATAC 58.675 55.000 21.06 3.39 36.87 1.47
2095 3174 1.334329 CGCTGCACGTACGGATATACA 60.334 52.381 21.06 7.04 36.87 2.29
2096 3175 2.734670 GCTGCACGTACGGATATACAA 58.265 47.619 21.06 0.00 0.00 2.41
2097 3176 3.314553 GCTGCACGTACGGATATACAAT 58.685 45.455 21.06 0.00 0.00 2.71
2098 3177 3.121279 GCTGCACGTACGGATATACAATG 59.879 47.826 21.06 6.29 0.00 2.82
2099 3178 4.295870 CTGCACGTACGGATATACAATGT 58.704 43.478 21.06 0.00 0.00 2.71
2100 3179 4.684877 TGCACGTACGGATATACAATGTT 58.315 39.130 21.06 0.00 0.00 2.71
2101 3180 5.110598 TGCACGTACGGATATACAATGTTT 58.889 37.500 21.06 0.00 0.00 2.83
2102 3181 5.581479 TGCACGTACGGATATACAATGTTTT 59.419 36.000 21.06 0.00 0.00 2.43
2103 3182 5.899696 GCACGTACGGATATACAATGTTTTG 59.100 40.000 21.06 3.67 38.86 2.44
2104 3183 6.237888 GCACGTACGGATATACAATGTTTTGA 60.238 38.462 21.06 0.00 36.64 2.69
2105 3184 7.517734 GCACGTACGGATATACAATGTTTTGAT 60.518 37.037 21.06 0.00 36.64 2.57
2106 3185 8.970293 CACGTACGGATATACAATGTTTTGATA 58.030 33.333 21.06 0.00 36.64 2.15
2107 3186 9.188588 ACGTACGGATATACAATGTTTTGATAG 57.811 33.333 21.06 0.00 36.64 2.08
2108 3187 9.401873 CGTACGGATATACAATGTTTTGATAGA 57.598 33.333 7.57 0.00 36.64 1.98
2121 3200 9.450807 AATGTTTTGATAGAAAAGTTCTGAACG 57.549 29.630 14.35 0.00 40.94 3.95
2122 3201 7.414436 TGTTTTGATAGAAAAGTTCTGAACGG 58.586 34.615 14.35 0.00 40.94 4.44
2123 3202 6.554334 TTTGATAGAAAAGTTCTGAACGGG 57.446 37.500 14.35 0.00 40.94 5.28
2124 3203 5.477607 TGATAGAAAAGTTCTGAACGGGA 57.522 39.130 14.35 0.00 40.94 5.14
2125 3204 6.049955 TGATAGAAAAGTTCTGAACGGGAT 57.950 37.500 14.35 3.31 40.94 3.85
2126 3205 5.874810 TGATAGAAAAGTTCTGAACGGGATG 59.125 40.000 14.35 0.00 40.94 3.51
2127 3206 2.814336 AGAAAAGTTCTGAACGGGATGC 59.186 45.455 14.35 4.44 38.91 3.91
2128 3207 2.568623 AAAGTTCTGAACGGGATGCT 57.431 45.000 14.35 0.00 36.23 3.79
2129 3208 1.813513 AAGTTCTGAACGGGATGCTG 58.186 50.000 14.35 0.00 36.23 4.41
2130 3209 0.976641 AGTTCTGAACGGGATGCTGA 59.023 50.000 14.35 0.00 36.23 4.26
2131 3210 1.079503 GTTCTGAACGGGATGCTGAC 58.920 55.000 4.57 0.00 0.00 3.51
2132 3211 0.684535 TTCTGAACGGGATGCTGACA 59.315 50.000 0.00 0.00 0.00 3.58
2133 3212 0.684535 TCTGAACGGGATGCTGACAA 59.315 50.000 0.00 0.00 0.00 3.18
2134 3213 1.081892 CTGAACGGGATGCTGACAAG 58.918 55.000 0.00 0.00 0.00 3.16
2135 3214 0.684535 TGAACGGGATGCTGACAAGA 59.315 50.000 0.00 0.00 0.00 3.02
2136 3215 1.338105 TGAACGGGATGCTGACAAGAG 60.338 52.381 0.00 0.00 0.00 2.85
2137 3216 0.687354 AACGGGATGCTGACAAGAGT 59.313 50.000 0.00 0.00 0.00 3.24
2138 3217 1.557099 ACGGGATGCTGACAAGAGTA 58.443 50.000 0.00 0.00 0.00 2.59
2139 3218 1.204941 ACGGGATGCTGACAAGAGTAC 59.795 52.381 0.00 0.00 0.00 2.73
2140 3219 1.478510 CGGGATGCTGACAAGAGTACT 59.521 52.381 0.00 0.00 0.00 2.73
2141 3220 2.480416 CGGGATGCTGACAAGAGTACTC 60.480 54.545 15.41 15.41 0.00 2.59
2142 3221 2.763448 GGGATGCTGACAAGAGTACTCT 59.237 50.000 20.00 20.00 42.75 3.24
2143 3222 3.430098 GGGATGCTGACAAGAGTACTCTG 60.430 52.174 25.83 20.12 40.36 3.35
2144 3223 2.732412 TGCTGACAAGAGTACTCTGC 57.268 50.000 25.83 22.43 40.36 4.26
2145 3224 2.242926 TGCTGACAAGAGTACTCTGCT 58.757 47.619 25.83 13.67 40.36 4.24
2146 3225 2.029560 TGCTGACAAGAGTACTCTGCTG 60.030 50.000 25.83 21.88 40.36 4.41
2147 3226 2.230025 GCTGACAAGAGTACTCTGCTGA 59.770 50.000 25.83 9.95 40.36 4.26
2148 3227 3.119173 GCTGACAAGAGTACTCTGCTGAT 60.119 47.826 25.83 7.19 40.36 2.90
2149 3228 4.097135 GCTGACAAGAGTACTCTGCTGATA 59.903 45.833 25.83 13.53 40.36 2.15
2150 3229 5.393569 GCTGACAAGAGTACTCTGCTGATAA 60.394 44.000 25.83 10.94 40.36 1.75
2151 3230 6.590234 TGACAAGAGTACTCTGCTGATAAA 57.410 37.500 25.83 7.44 40.36 1.40
2152 3231 6.625362 TGACAAGAGTACTCTGCTGATAAAG 58.375 40.000 25.83 9.75 40.36 1.85
2153 3232 5.971763 ACAAGAGTACTCTGCTGATAAAGG 58.028 41.667 25.83 8.09 40.36 3.11
2154 3233 5.717178 ACAAGAGTACTCTGCTGATAAAGGA 59.283 40.000 25.83 0.00 40.36 3.36
2155 3234 6.211584 ACAAGAGTACTCTGCTGATAAAGGAA 59.788 38.462 25.83 0.00 40.36 3.36
2156 3235 7.093112 ACAAGAGTACTCTGCTGATAAAGGAAT 60.093 37.037 25.83 2.15 40.36 3.01
2157 3236 6.815089 AGAGTACTCTGCTGATAAAGGAATG 58.185 40.000 24.62 0.00 38.75 2.67
2158 3237 5.923204 AGTACTCTGCTGATAAAGGAATGG 58.077 41.667 0.00 0.00 0.00 3.16
2159 3238 4.162040 ACTCTGCTGATAAAGGAATGGG 57.838 45.455 0.00 0.00 0.00 4.00
2160 3239 2.883386 CTCTGCTGATAAAGGAATGGGC 59.117 50.000 0.00 0.00 0.00 5.36
2161 3240 2.241941 TCTGCTGATAAAGGAATGGGCA 59.758 45.455 0.00 0.00 0.00 5.36
2162 3241 2.360165 CTGCTGATAAAGGAATGGGCAC 59.640 50.000 0.00 0.00 0.00 5.01
2181 3260 2.125793 GGTAGTCGCCGGTTGACC 60.126 66.667 20.81 10.44 37.04 4.02
2192 3271 4.047059 GTTGACCGGTCGCCTCGA 62.047 66.667 28.70 8.10 0.00 4.04
2193 3272 3.744719 TTGACCGGTCGCCTCGAG 61.745 66.667 28.70 5.13 36.23 4.04
2195 3274 4.176851 GACCGGTCGCCTCGAGTC 62.177 72.222 20.85 0.00 36.23 3.36
2203 3282 4.208686 GCCTCGAGTCGCCGGATT 62.209 66.667 20.43 0.00 0.00 3.01
2204 3283 2.026301 CCTCGAGTCGCCGGATTC 59.974 66.667 5.05 0.00 0.00 2.52
2205 3284 2.771639 CCTCGAGTCGCCGGATTCA 61.772 63.158 5.05 0.00 0.00 2.57
2206 3285 1.298713 CTCGAGTCGCCGGATTCAG 60.299 63.158 5.05 0.00 0.00 3.02
2207 3286 1.994507 CTCGAGTCGCCGGATTCAGT 61.995 60.000 5.05 0.00 0.00 3.41
2208 3287 1.153823 CGAGTCGCCGGATTCAGTT 60.154 57.895 5.05 0.00 0.00 3.16
2209 3288 1.140407 CGAGTCGCCGGATTCAGTTC 61.140 60.000 5.05 0.00 0.00 3.01
2210 3289 0.173708 GAGTCGCCGGATTCAGTTCT 59.826 55.000 5.05 0.00 0.00 3.01
2211 3290 0.608640 AGTCGCCGGATTCAGTTCTT 59.391 50.000 5.05 0.00 0.00 2.52
2212 3291 1.822990 AGTCGCCGGATTCAGTTCTTA 59.177 47.619 5.05 0.00 0.00 2.10
2213 3292 2.232941 AGTCGCCGGATTCAGTTCTTAA 59.767 45.455 5.05 0.00 0.00 1.85
2214 3293 2.347755 GTCGCCGGATTCAGTTCTTAAC 59.652 50.000 5.05 0.00 0.00 2.01
2215 3294 1.323534 CGCCGGATTCAGTTCTTAACG 59.676 52.381 5.05 0.00 36.23 3.18
2216 3295 2.344025 GCCGGATTCAGTTCTTAACGT 58.656 47.619 5.05 0.00 36.23 3.99
2217 3296 2.347755 GCCGGATTCAGTTCTTAACGTC 59.652 50.000 5.05 0.00 36.23 4.34
2218 3297 3.846360 CCGGATTCAGTTCTTAACGTCT 58.154 45.455 0.00 0.00 36.23 4.18
2219 3298 3.612860 CCGGATTCAGTTCTTAACGTCTG 59.387 47.826 0.00 0.00 36.23 3.51
2220 3299 4.235360 CGGATTCAGTTCTTAACGTCTGT 58.765 43.478 0.00 0.00 36.23 3.41
2221 3300 4.684703 CGGATTCAGTTCTTAACGTCTGTT 59.315 41.667 0.00 0.00 42.19 3.16
2222 3301 5.176958 CGGATTCAGTTCTTAACGTCTGTTT 59.823 40.000 0.00 0.00 39.54 2.83
2223 3302 6.363473 GGATTCAGTTCTTAACGTCTGTTTG 58.637 40.000 0.00 0.00 39.54 2.93
2224 3303 5.728351 TTCAGTTCTTAACGTCTGTTTGG 57.272 39.130 0.00 0.00 39.54 3.28
2225 3304 5.013568 TCAGTTCTTAACGTCTGTTTGGA 57.986 39.130 0.00 0.00 39.54 3.53
2226 3305 5.607477 TCAGTTCTTAACGTCTGTTTGGAT 58.393 37.500 0.00 0.00 39.54 3.41
2227 3306 5.694910 TCAGTTCTTAACGTCTGTTTGGATC 59.305 40.000 0.00 0.00 39.54 3.36
2228 3307 4.684703 AGTTCTTAACGTCTGTTTGGATCG 59.315 41.667 0.00 0.00 39.54 3.69
2229 3308 4.508461 TCTTAACGTCTGTTTGGATCGA 57.492 40.909 0.00 0.00 39.54 3.59
2230 3309 5.068234 TCTTAACGTCTGTTTGGATCGAT 57.932 39.130 0.00 0.00 39.54 3.59
2231 3310 4.862574 TCTTAACGTCTGTTTGGATCGATG 59.137 41.667 0.54 0.00 39.54 3.84
2232 3311 2.010145 ACGTCTGTTTGGATCGATGG 57.990 50.000 0.54 0.00 0.00 3.51
2233 3312 1.275291 ACGTCTGTTTGGATCGATGGT 59.725 47.619 0.54 0.00 0.00 3.55
2234 3313 2.289444 ACGTCTGTTTGGATCGATGGTT 60.289 45.455 0.54 0.00 0.00 3.67
2235 3314 2.348666 CGTCTGTTTGGATCGATGGTTC 59.651 50.000 0.54 0.00 0.00 3.62
2236 3315 2.678336 GTCTGTTTGGATCGATGGTTCC 59.322 50.000 0.54 0.00 33.40 3.62
2237 3316 1.665679 CTGTTTGGATCGATGGTTCCG 59.334 52.381 0.54 0.00 35.20 4.30
2238 3317 0.377203 GTTTGGATCGATGGTTCCGC 59.623 55.000 0.54 0.00 35.20 5.54
2239 3318 0.035915 TTTGGATCGATGGTTCCGCA 60.036 50.000 0.54 0.00 35.20 5.69
2240 3319 0.461870 TTGGATCGATGGTTCCGCAG 60.462 55.000 0.54 0.00 35.20 5.18
2241 3320 2.247437 GGATCGATGGTTCCGCAGC 61.247 63.158 0.54 0.00 0.00 5.25
2242 3321 1.521457 GATCGATGGTTCCGCAGCA 60.521 57.895 0.54 0.00 37.28 4.41
2243 3322 1.493950 GATCGATGGTTCCGCAGCAG 61.494 60.000 0.54 0.00 35.97 4.24
2244 3323 1.960040 ATCGATGGTTCCGCAGCAGA 61.960 55.000 0.00 0.00 35.97 4.26
2245 3324 1.741401 CGATGGTTCCGCAGCAGAA 60.741 57.895 0.00 0.00 35.97 3.02
2246 3325 1.091771 CGATGGTTCCGCAGCAGAAT 61.092 55.000 0.00 0.00 35.97 2.40
2247 3326 1.806247 CGATGGTTCCGCAGCAGAATA 60.806 52.381 0.00 0.00 35.97 1.75
2248 3327 2.288666 GATGGTTCCGCAGCAGAATAA 58.711 47.619 0.00 0.00 35.97 1.40
2249 3328 1.737838 TGGTTCCGCAGCAGAATAAG 58.262 50.000 0.00 0.00 0.00 1.73
2250 3329 1.003118 TGGTTCCGCAGCAGAATAAGT 59.997 47.619 0.00 0.00 0.00 2.24
2251 3330 1.666189 GGTTCCGCAGCAGAATAAGTC 59.334 52.381 0.00 0.00 0.00 3.01
2252 3331 2.346803 GTTCCGCAGCAGAATAAGTCA 58.653 47.619 0.00 0.00 0.00 3.41
2253 3332 2.742053 GTTCCGCAGCAGAATAAGTCAA 59.258 45.455 0.00 0.00 0.00 3.18
2254 3333 2.346803 TCCGCAGCAGAATAAGTCAAC 58.653 47.619 0.00 0.00 0.00 3.18
2255 3334 1.061131 CCGCAGCAGAATAAGTCAACG 59.939 52.381 0.00 0.00 0.00 4.10
2256 3335 1.527793 CGCAGCAGAATAAGTCAACGC 60.528 52.381 0.00 0.00 0.00 4.84
2257 3336 1.464608 GCAGCAGAATAAGTCAACGCA 59.535 47.619 0.00 0.00 0.00 5.24
2258 3337 2.726066 GCAGCAGAATAAGTCAACGCAC 60.726 50.000 0.00 0.00 0.00 5.34
2259 3338 1.726791 AGCAGAATAAGTCAACGCACG 59.273 47.619 0.00 0.00 0.00 5.34
2260 3339 1.786928 GCAGAATAAGTCAACGCACGC 60.787 52.381 0.00 0.00 0.00 5.34
2261 3340 1.459209 CAGAATAAGTCAACGCACGCA 59.541 47.619 0.00 0.00 0.00 5.24
2262 3341 2.096466 CAGAATAAGTCAACGCACGCAA 60.096 45.455 0.00 0.00 0.00 4.85
2263 3342 2.546368 AGAATAAGTCAACGCACGCAAA 59.454 40.909 0.00 0.00 0.00 3.68
2264 3343 3.188460 AGAATAAGTCAACGCACGCAAAT 59.812 39.130 0.00 0.00 0.00 2.32
2265 3344 2.587612 TAAGTCAACGCACGCAAATC 57.412 45.000 0.00 0.00 0.00 2.17
2266 3345 0.384230 AAGTCAACGCACGCAAATCG 60.384 50.000 0.00 0.00 45.38 3.34
2281 3360 6.332504 CGCAAATCGTCTATTATATGGTCC 57.667 41.667 0.00 0.00 0.00 4.46
2282 3361 6.100004 CGCAAATCGTCTATTATATGGTCCT 58.900 40.000 0.00 0.00 0.00 3.85
2283 3362 6.035005 CGCAAATCGTCTATTATATGGTCCTG 59.965 42.308 0.00 0.00 0.00 3.86
2284 3363 6.183360 GCAAATCGTCTATTATATGGTCCTGC 60.183 42.308 0.00 0.00 0.00 4.85
2285 3364 6.605471 AATCGTCTATTATATGGTCCTGCA 57.395 37.500 0.00 0.00 0.00 4.41
2286 3365 6.798427 ATCGTCTATTATATGGTCCTGCAT 57.202 37.500 0.00 0.00 0.00 3.96
2287 3366 7.898014 ATCGTCTATTATATGGTCCTGCATA 57.102 36.000 0.00 0.00 0.00 3.14
2288 3367 7.334844 TCGTCTATTATATGGTCCTGCATAG 57.665 40.000 0.00 0.00 0.00 2.23
2289 3368 5.980116 CGTCTATTATATGGTCCTGCATAGC 59.020 44.000 0.00 0.00 0.00 2.97
2290 3369 6.183360 CGTCTATTATATGGTCCTGCATAGCT 60.183 42.308 0.00 0.00 0.00 3.32
2291 3370 7.206687 GTCTATTATATGGTCCTGCATAGCTC 58.793 42.308 0.00 0.00 0.00 4.09
2292 3371 7.069331 GTCTATTATATGGTCCTGCATAGCTCT 59.931 40.741 0.00 0.00 0.00 4.09
2293 3372 3.977134 ATATGGTCCTGCATAGCTCTG 57.023 47.619 0.00 0.00 0.00 3.35
2294 3373 0.763652 ATGGTCCTGCATAGCTCTGG 59.236 55.000 0.83 0.00 0.00 3.86
2295 3374 1.227793 GGTCCTGCATAGCTCTGGC 60.228 63.158 0.83 0.00 39.06 4.85
2296 3375 1.593750 GTCCTGCATAGCTCTGGCG 60.594 63.158 0.83 0.00 44.37 5.69
2297 3376 1.758122 TCCTGCATAGCTCTGGCGA 60.758 57.895 0.83 0.00 44.37 5.54
2298 3377 1.300775 CCTGCATAGCTCTGGCGAG 60.301 63.158 0.83 0.00 44.37 5.03
2299 3378 1.300775 CTGCATAGCTCTGGCGAGG 60.301 63.158 0.83 0.00 44.37 4.63
2300 3379 2.664518 GCATAGCTCTGGCGAGGC 60.665 66.667 0.83 0.00 42.55 4.70
2313 3392 4.344865 GAGGCCGTTCCCCTTGCA 62.345 66.667 0.00 0.00 34.51 4.08
2314 3393 3.860930 GAGGCCGTTCCCCTTGCAA 62.861 63.158 0.00 0.00 34.51 4.08
2315 3394 2.915137 GGCCGTTCCCCTTGCAAA 60.915 61.111 0.00 0.00 0.00 3.68
2316 3395 2.282783 GGCCGTTCCCCTTGCAAAT 61.283 57.895 0.00 0.00 0.00 2.32
2317 3396 1.215382 GCCGTTCCCCTTGCAAATC 59.785 57.895 0.00 0.00 0.00 2.17
2318 3397 1.506262 CCGTTCCCCTTGCAAATCG 59.494 57.895 0.00 0.00 0.00 3.34
2319 3398 1.241315 CCGTTCCCCTTGCAAATCGT 61.241 55.000 0.00 0.00 0.00 3.73
2320 3399 0.168128 CGTTCCCCTTGCAAATCGTC 59.832 55.000 0.00 0.00 0.00 4.20
2321 3400 0.168128 GTTCCCCTTGCAAATCGTCG 59.832 55.000 0.00 0.00 0.00 5.12
2322 3401 1.582610 TTCCCCTTGCAAATCGTCGC 61.583 55.000 0.00 0.00 0.00 5.19
2323 3402 2.485122 CCCTTGCAAATCGTCGCC 59.515 61.111 0.00 0.00 0.00 5.54
2324 3403 2.485122 CCTTGCAAATCGTCGCCC 59.515 61.111 0.00 0.00 0.00 6.13
2325 3404 2.331893 CCTTGCAAATCGTCGCCCA 61.332 57.895 0.00 0.00 0.00 5.36
2326 3405 1.154225 CTTGCAAATCGTCGCCCAC 60.154 57.895 0.00 0.00 0.00 4.61
2327 3406 1.851021 CTTGCAAATCGTCGCCCACA 61.851 55.000 0.00 0.00 0.00 4.17
2328 3407 1.448119 TTGCAAATCGTCGCCCACAA 61.448 50.000 0.00 0.00 0.00 3.33
2329 3408 1.442017 GCAAATCGTCGCCCACAAC 60.442 57.895 0.00 0.00 0.00 3.32
2330 3409 1.154488 CAAATCGTCGCCCACAACG 60.154 57.895 0.00 0.00 40.17 4.10
2331 3410 2.961669 AAATCGTCGCCCACAACGC 61.962 57.895 0.00 0.00 38.72 4.84
2332 3411 3.876589 AATCGTCGCCCACAACGCT 62.877 57.895 0.00 0.00 38.72 5.07
2335 3414 3.712881 GTCGCCCACAACGCTCAC 61.713 66.667 0.00 0.00 0.00 3.51
2336 3415 4.228567 TCGCCCACAACGCTCACA 62.229 61.111 0.00 0.00 0.00 3.58
2337 3416 3.716006 CGCCCACAACGCTCACAG 61.716 66.667 0.00 0.00 0.00 3.66
2338 3417 4.030452 GCCCACAACGCTCACAGC 62.030 66.667 0.00 0.00 38.02 4.40
2339 3418 3.357079 CCCACAACGCTCACAGCC 61.357 66.667 0.00 0.00 38.18 4.85
2340 3419 3.716006 CCACAACGCTCACAGCCG 61.716 66.667 0.00 0.00 38.18 5.52
2341 3420 3.716006 CACAACGCTCACAGCCGG 61.716 66.667 0.00 0.00 38.18 6.13
2354 3433 4.699522 GCCGGCGACACCCTCTTT 62.700 66.667 12.58 0.00 33.26 2.52
2355 3434 2.742372 CCGGCGACACCCTCTTTG 60.742 66.667 9.30 0.00 33.26 2.77
2356 3435 3.423154 CGGCGACACCCTCTTTGC 61.423 66.667 0.00 0.00 33.26 3.68
2357 3436 3.056328 GGCGACACCCTCTTTGCC 61.056 66.667 0.00 0.00 35.07 4.52
2358 3437 2.281484 GCGACACCCTCTTTGCCA 60.281 61.111 0.00 0.00 0.00 4.92
2359 3438 2.328099 GCGACACCCTCTTTGCCAG 61.328 63.158 0.00 0.00 0.00 4.85
2360 3439 1.371183 CGACACCCTCTTTGCCAGA 59.629 57.895 0.00 0.00 0.00 3.86
2361 3440 0.036010 CGACACCCTCTTTGCCAGAT 60.036 55.000 0.00 0.00 0.00 2.90
2362 3441 1.611673 CGACACCCTCTTTGCCAGATT 60.612 52.381 0.00 0.00 0.00 2.40
2363 3442 1.815003 GACACCCTCTTTGCCAGATTG 59.185 52.381 0.00 0.00 0.00 2.67
2364 3443 1.180029 CACCCTCTTTGCCAGATTGG 58.820 55.000 0.00 0.00 41.55 3.16
2365 3444 0.779997 ACCCTCTTTGCCAGATTGGT 59.220 50.000 0.00 0.00 40.46 3.67
2366 3445 1.992557 ACCCTCTTTGCCAGATTGGTA 59.007 47.619 0.00 0.00 40.46 3.25
2367 3446 2.025887 ACCCTCTTTGCCAGATTGGTAG 60.026 50.000 0.00 0.00 40.46 3.18
2368 3447 2.239654 CCCTCTTTGCCAGATTGGTAGA 59.760 50.000 0.00 0.00 40.46 2.59
2369 3448 3.117738 CCCTCTTTGCCAGATTGGTAGAT 60.118 47.826 0.00 0.00 40.46 1.98
2370 3449 3.881688 CCTCTTTGCCAGATTGGTAGATG 59.118 47.826 0.00 0.00 40.46 2.90
2371 3450 3.282021 TCTTTGCCAGATTGGTAGATGC 58.718 45.455 0.00 0.00 40.46 3.91
2372 3451 2.057137 TTGCCAGATTGGTAGATGCC 57.943 50.000 0.00 0.00 40.46 4.40
2373 3452 0.179048 TGCCAGATTGGTAGATGCCG 60.179 55.000 0.00 0.00 40.46 5.69
2374 3453 1.510480 GCCAGATTGGTAGATGCCGC 61.510 60.000 0.00 0.00 40.46 6.53
2375 3454 0.107456 CCAGATTGGTAGATGCCGCT 59.893 55.000 0.00 0.00 31.35 5.52
2376 3455 1.506493 CAGATTGGTAGATGCCGCTC 58.494 55.000 0.00 0.00 0.00 5.03
2377 3456 1.069823 CAGATTGGTAGATGCCGCTCT 59.930 52.381 0.00 0.00 0.00 4.09
2378 3457 1.342819 AGATTGGTAGATGCCGCTCTC 59.657 52.381 0.00 0.00 0.00 3.20
2379 3458 1.069204 GATTGGTAGATGCCGCTCTCA 59.931 52.381 0.00 0.00 0.00 3.27
2380 3459 0.461548 TTGGTAGATGCCGCTCTCAG 59.538 55.000 0.00 0.00 0.00 3.35
2381 3460 1.365633 GGTAGATGCCGCTCTCAGG 59.634 63.158 0.00 0.00 0.00 3.86
2382 3461 1.109920 GGTAGATGCCGCTCTCAGGA 61.110 60.000 0.00 0.00 0.00 3.86
2383 3462 0.965439 GTAGATGCCGCTCTCAGGAT 59.035 55.000 0.00 0.00 0.00 3.24
2384 3463 0.964700 TAGATGCCGCTCTCAGGATG 59.035 55.000 0.00 0.00 37.54 3.51
2385 3464 1.047596 AGATGCCGCTCTCAGGATGT 61.048 55.000 0.00 0.00 37.40 3.06
2386 3465 0.676184 GATGCCGCTCTCAGGATGTA 59.324 55.000 0.00 0.00 37.40 2.29
2387 3466 1.274728 GATGCCGCTCTCAGGATGTAT 59.725 52.381 0.00 0.00 37.40 2.29
2388 3467 0.676184 TGCCGCTCTCAGGATGTATC 59.324 55.000 0.00 0.00 37.40 2.24
2398 3477 3.564455 GGATGTATCCGTCCACGTC 57.436 57.895 0.00 0.00 44.88 4.34
2399 3478 0.031721 GGATGTATCCGTCCACGTCC 59.968 60.000 0.00 3.79 44.88 4.79
2400 3479 0.031721 GATGTATCCGTCCACGTCCC 59.968 60.000 0.00 0.00 37.74 4.46
2401 3480 1.397390 ATGTATCCGTCCACGTCCCC 61.397 60.000 0.00 0.00 37.74 4.81
2402 3481 2.442643 TATCCGTCCACGTCCCCC 60.443 66.667 0.00 0.00 37.74 5.40
2412 3491 2.993264 CGTCCCCCGTACACAGGT 60.993 66.667 0.00 0.00 0.00 4.00
2413 3492 2.660802 GTCCCCCGTACACAGGTG 59.339 66.667 0.00 0.00 0.00 4.00
2414 3493 2.202053 TCCCCCGTACACAGGTGT 59.798 61.111 10.26 10.26 46.87 4.16
2415 3494 0.899717 GTCCCCCGTACACAGGTGTA 60.900 60.000 8.14 8.14 44.42 2.90
2416 3495 0.178938 TCCCCCGTACACAGGTGTAA 60.179 55.000 13.41 0.00 46.33 2.41
2417 3496 0.037046 CCCCCGTACACAGGTGTAAC 60.037 60.000 13.41 7.68 46.33 2.50
2418 3497 0.388907 CCCCGTACACAGGTGTAACG 60.389 60.000 13.41 16.70 46.33 3.18
2419 3498 0.597568 CCCGTACACAGGTGTAACGA 59.402 55.000 23.33 3.35 46.33 3.85
2420 3499 1.666888 CCCGTACACAGGTGTAACGAC 60.667 57.143 23.33 12.07 46.33 4.34
2421 3500 1.666888 CCGTACACAGGTGTAACGACC 60.667 57.143 23.33 9.95 46.33 4.79
2422 3501 1.001487 CGTACACAGGTGTAACGACCA 60.001 52.381 19.93 0.00 46.33 4.02
2423 3502 2.543445 CGTACACAGGTGTAACGACCAA 60.543 50.000 19.93 0.00 46.33 3.67
2424 3503 1.944032 ACACAGGTGTAACGACCAAC 58.056 50.000 2.68 0.00 42.90 3.77
2425 3504 1.223187 CACAGGTGTAACGACCAACC 58.777 55.000 0.00 0.00 38.63 3.77
2426 3505 1.125633 ACAGGTGTAACGACCAACCT 58.874 50.000 0.00 0.00 43.92 3.50
2428 3507 1.416243 AGGTGTAACGACCAACCTGA 58.584 50.000 0.00 0.00 41.52 3.86
2429 3508 1.975680 AGGTGTAACGACCAACCTGAT 59.024 47.619 0.00 0.00 41.52 2.90
2430 3509 3.167485 AGGTGTAACGACCAACCTGATA 58.833 45.455 0.00 0.00 41.52 2.15
2431 3510 3.194968 AGGTGTAACGACCAACCTGATAG 59.805 47.826 0.00 0.00 41.52 2.08
2432 3511 3.518590 GTGTAACGACCAACCTGATAGG 58.481 50.000 0.00 0.00 42.49 2.57
2433 3512 2.498481 TGTAACGACCAACCTGATAGGG 59.502 50.000 0.00 0.00 40.58 3.53
2434 3513 1.652947 AACGACCAACCTGATAGGGT 58.347 50.000 0.00 0.00 40.58 4.34
2436 3515 1.553704 ACGACCAACCTGATAGGGTTC 59.446 52.381 0.00 0.00 46.58 3.62
2437 3516 1.553248 CGACCAACCTGATAGGGTTCA 59.447 52.381 0.00 0.00 46.58 3.18
2438 3517 2.418746 CGACCAACCTGATAGGGTTCAG 60.419 54.545 0.00 0.00 46.58 3.02
2439 3518 1.282157 ACCAACCTGATAGGGTTCAGC 59.718 52.381 0.00 0.00 46.58 4.26
2440 3519 1.656652 CAACCTGATAGGGTTCAGCG 58.343 55.000 0.00 0.00 46.58 5.18
2441 3520 1.207089 CAACCTGATAGGGTTCAGCGA 59.793 52.381 0.00 0.00 46.58 4.93
2442 3521 1.794714 ACCTGATAGGGTTCAGCGAT 58.205 50.000 0.00 0.00 41.50 4.58
2443 3522 1.689273 ACCTGATAGGGTTCAGCGATC 59.311 52.381 0.00 0.00 41.50 3.69
2444 3523 1.001406 CCTGATAGGGTTCAGCGATCC 59.999 57.143 0.00 0.00 41.50 3.36
2445 3524 1.688735 CTGATAGGGTTCAGCGATCCA 59.311 52.381 0.00 0.00 36.96 3.41
2446 3525 2.301296 CTGATAGGGTTCAGCGATCCAT 59.699 50.000 0.00 3.97 36.96 3.41
2447 3526 2.037641 TGATAGGGTTCAGCGATCCATG 59.962 50.000 0.00 0.00 0.00 3.66
2448 3527 0.106708 TAGGGTTCAGCGATCCATGC 59.893 55.000 0.00 0.00 0.00 4.06
2449 3528 1.153086 GGGTTCAGCGATCCATGCT 60.153 57.895 0.00 0.00 45.31 3.79
2450 3529 0.749454 GGGTTCAGCGATCCATGCTT 60.749 55.000 0.00 0.00 41.72 3.91
2451 3530 1.475034 GGGTTCAGCGATCCATGCTTA 60.475 52.381 0.00 0.00 41.72 3.09
2452 3531 1.599542 GGTTCAGCGATCCATGCTTAC 59.400 52.381 0.00 0.00 41.72 2.34
2453 3532 1.599542 GTTCAGCGATCCATGCTTACC 59.400 52.381 0.00 0.00 41.72 2.85
2454 3533 0.829990 TCAGCGATCCATGCTTACCA 59.170 50.000 0.00 0.00 41.72 3.25
2455 3534 1.417517 TCAGCGATCCATGCTTACCAT 59.582 47.619 0.00 0.00 41.72 3.55
2463 3542 2.838386 CATGCTTACCATGTCAGTGC 57.162 50.000 0.00 0.00 45.05 4.40
2464 3543 1.063027 CATGCTTACCATGTCAGTGCG 59.937 52.381 0.00 0.00 45.05 5.34
2465 3544 0.673333 TGCTTACCATGTCAGTGCGG 60.673 55.000 0.00 0.00 0.00 5.69
2466 3545 0.391130 GCTTACCATGTCAGTGCGGA 60.391 55.000 0.00 0.00 0.00 5.54
2467 3546 1.743772 GCTTACCATGTCAGTGCGGAT 60.744 52.381 0.00 0.00 0.00 4.18
2468 3547 2.205074 CTTACCATGTCAGTGCGGATC 58.795 52.381 0.00 0.00 0.00 3.36
2469 3548 0.102300 TACCATGTCAGTGCGGATCG 59.898 55.000 0.00 0.00 0.00 3.69
2470 3549 1.141665 CCATGTCAGTGCGGATCGA 59.858 57.895 0.00 0.00 0.00 3.59
2471 3550 0.249615 CCATGTCAGTGCGGATCGAT 60.250 55.000 0.00 0.00 0.00 3.59
2472 3551 1.575244 CATGTCAGTGCGGATCGATT 58.425 50.000 0.00 0.00 0.00 3.34
2473 3552 1.524355 CATGTCAGTGCGGATCGATTC 59.476 52.381 0.00 0.00 0.00 2.52
2474 3553 0.530288 TGTCAGTGCGGATCGATTCA 59.470 50.000 4.19 0.00 0.00 2.57
2475 3554 0.924090 GTCAGTGCGGATCGATTCAC 59.076 55.000 4.19 10.71 0.00 3.18
2476 3555 0.179111 TCAGTGCGGATCGATTCACC 60.179 55.000 17.20 7.05 0.00 4.02
2477 3556 0.460109 CAGTGCGGATCGATTCACCA 60.460 55.000 17.20 6.41 0.00 4.17
2478 3557 0.465705 AGTGCGGATCGATTCACCAT 59.534 50.000 17.20 3.78 0.00 3.55
2479 3558 0.861837 GTGCGGATCGATTCACCATC 59.138 55.000 4.19 0.00 0.00 3.51
2480 3559 0.463620 TGCGGATCGATTCACCATCA 59.536 50.000 4.19 0.00 0.00 3.07
2481 3560 0.861837 GCGGATCGATTCACCATCAC 59.138 55.000 4.19 0.00 0.00 3.06
2482 3561 1.806247 GCGGATCGATTCACCATCACA 60.806 52.381 4.19 0.00 0.00 3.58
2483 3562 1.860950 CGGATCGATTCACCATCACAC 59.139 52.381 4.19 0.00 0.00 3.82
2484 3563 2.738321 CGGATCGATTCACCATCACACA 60.738 50.000 4.19 0.00 0.00 3.72
2485 3564 2.609459 GGATCGATTCACCATCACACAC 59.391 50.000 0.00 0.00 0.00 3.82
2486 3565 1.708822 TCGATTCACCATCACACACG 58.291 50.000 0.00 0.00 0.00 4.49
2487 3566 0.721154 CGATTCACCATCACACACGG 59.279 55.000 0.00 0.00 0.00 4.94
2488 3567 1.808411 GATTCACCATCACACACGGT 58.192 50.000 0.00 0.00 0.00 4.83
2489 3568 2.672760 CGATTCACCATCACACACGGTA 60.673 50.000 0.00 0.00 0.00 4.02
2490 3569 2.157834 TTCACCATCACACACGGTAC 57.842 50.000 0.00 0.00 0.00 3.34
2491 3570 0.319083 TCACCATCACACACGGTACC 59.681 55.000 0.16 0.16 0.00 3.34
2492 3571 1.011968 CACCATCACACACGGTACCG 61.012 60.000 32.22 32.22 46.03 4.02
2493 3572 1.180456 ACCATCACACACGGTACCGA 61.180 55.000 39.52 17.56 42.83 4.69
2494 3573 0.174845 CCATCACACACGGTACCGAT 59.825 55.000 39.52 23.96 42.83 4.18
2495 3574 1.406180 CCATCACACACGGTACCGATA 59.594 52.381 39.52 17.48 42.83 2.92
2496 3575 2.035449 CCATCACACACGGTACCGATAT 59.965 50.000 39.52 21.03 42.83 1.63
2497 3576 3.253921 CCATCACACACGGTACCGATATA 59.746 47.826 39.52 19.18 42.83 0.86
2498 3577 4.473199 CATCACACACGGTACCGATATAG 58.527 47.826 39.52 24.03 42.83 1.31
2499 3578 3.544684 TCACACACGGTACCGATATAGT 58.455 45.455 39.52 24.56 42.83 2.12
2500 3579 4.702831 TCACACACGGTACCGATATAGTA 58.297 43.478 39.52 16.23 42.83 1.82
2501 3580 5.308014 TCACACACGGTACCGATATAGTAT 58.692 41.667 39.52 15.94 42.83 2.12
2502 3581 6.463360 TCACACACGGTACCGATATAGTATA 58.537 40.000 39.52 17.08 42.83 1.47
2503 3582 6.934083 TCACACACGGTACCGATATAGTATAA 59.066 38.462 39.52 15.04 42.83 0.98
2504 3583 7.607607 TCACACACGGTACCGATATAGTATAAT 59.392 37.037 39.52 10.68 42.83 1.28
2505 3584 8.882736 CACACACGGTACCGATATAGTATAATA 58.117 37.037 39.52 0.00 42.83 0.98
2506 3585 9.618890 ACACACGGTACCGATATAGTATAATAT 57.381 33.333 39.52 9.98 42.83 1.28
2508 3587 9.836864 ACACGGTACCGATATAGTATAATATCA 57.163 33.333 39.52 0.00 42.83 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.959311 CGGTAAAAACATATTTTCTCCGTCTG 59.041 38.462 13.32 0.00 42.46 3.51
253 254 3.760035 TCTCCGAGCGTTCCTGCC 61.760 66.667 0.00 0.00 34.65 4.85
357 738 5.390991 GCACTATTCCAAATATAAGGCTCGC 60.391 44.000 0.00 0.00 0.00 5.03
358 739 5.934625 AGCACTATTCCAAATATAAGGCTCG 59.065 40.000 0.00 0.00 0.00 5.03
483 964 6.947644 TGGCACACTCTATACGACTATTTA 57.052 37.500 0.00 0.00 0.00 1.40
578 1062 5.305902 TGGGGAAAAAGGAGTTTTATTCCAC 59.694 40.000 4.90 1.51 39.60 4.02
589 1073 3.836365 TTTTTGCTGGGGAAAAAGGAG 57.164 42.857 5.78 0.00 32.21 3.69
726 1491 3.834799 GGCTGGTCCCTACGTCCG 61.835 72.222 0.00 0.00 0.00 4.79
728 1493 1.144057 CATGGCTGGTCCCTACGTC 59.856 63.158 0.00 0.00 0.00 4.34
743 1515 4.627611 AGAGGCGACAAAATCATTCATG 57.372 40.909 0.00 0.00 0.00 3.07
777 1549 7.999679 TCATGTCACCATATGAAAAAGAATCC 58.000 34.615 3.65 0.00 39.72 3.01
848 1621 4.022849 ACCTTGACTACGTACCAACAGTAC 60.023 45.833 0.00 0.00 46.74 2.73
849 1622 4.144297 ACCTTGACTACGTACCAACAGTA 58.856 43.478 0.00 0.00 0.00 2.74
850 1623 2.961062 ACCTTGACTACGTACCAACAGT 59.039 45.455 0.00 0.00 0.00 3.55
851 1624 3.572584 GACCTTGACTACGTACCAACAG 58.427 50.000 0.00 0.00 0.00 3.16
852 1625 2.030893 CGACCTTGACTACGTACCAACA 60.031 50.000 0.00 0.00 0.00 3.33
853 1626 2.030805 ACGACCTTGACTACGTACCAAC 60.031 50.000 0.00 0.00 37.22 3.77
854 1627 2.226437 GACGACCTTGACTACGTACCAA 59.774 50.000 0.00 0.00 39.04 3.67
855 1628 1.806542 GACGACCTTGACTACGTACCA 59.193 52.381 0.00 0.00 39.04 3.25
856 1629 1.201965 CGACGACCTTGACTACGTACC 60.202 57.143 0.00 0.00 39.04 3.34
857 1630 1.788344 GCGACGACCTTGACTACGTAC 60.788 57.143 0.00 0.00 39.04 3.67
858 1631 0.443869 GCGACGACCTTGACTACGTA 59.556 55.000 0.00 0.00 39.04 3.57
859 1632 1.208614 GCGACGACCTTGACTACGT 59.791 57.895 0.00 0.00 41.57 3.57
860 1633 1.513586 GGCGACGACCTTGACTACG 60.514 63.158 0.00 0.00 0.00 3.51
877 1650 5.674068 GCGACGAATGTGATCTATACCTAGG 60.674 48.000 7.41 7.41 0.00 3.02
893 1666 4.569943 AGCATGGATTTATAGCGACGAAT 58.430 39.130 0.00 0.00 0.00 3.34
912 1685 0.819259 AGACGAAGCAAGGCAAAGCA 60.819 50.000 0.00 0.00 0.00 3.91
920 1693 5.009110 TCACTAGATGGATAGACGAAGCAAG 59.991 44.000 0.00 0.00 0.00 4.01
922 1695 4.461198 TCACTAGATGGATAGACGAAGCA 58.539 43.478 0.00 0.00 0.00 3.91
924 1697 5.067273 ACCTCACTAGATGGATAGACGAAG 58.933 45.833 0.00 0.00 0.00 3.79
925 1698 5.050126 ACCTCACTAGATGGATAGACGAA 57.950 43.478 0.00 0.00 0.00 3.85
931 1704 6.102762 TCTGGACTAACCTCACTAGATGGATA 59.897 42.308 0.00 0.00 39.86 2.59
932 1705 5.103473 TCTGGACTAACCTCACTAGATGGAT 60.103 44.000 0.00 0.00 39.86 3.41
933 1706 4.229812 TCTGGACTAACCTCACTAGATGGA 59.770 45.833 0.00 0.00 39.86 3.41
934 1707 4.339814 GTCTGGACTAACCTCACTAGATGG 59.660 50.000 0.00 0.00 39.86 3.51
1008 1781 2.776913 GGAGAAGAGGAGGTCGCGG 61.777 68.421 6.13 0.00 0.00 6.46
1137 1910 1.139095 CTTGACGTAGCCGAGACCC 59.861 63.158 0.00 0.00 37.88 4.46
1446 2264 3.246112 ACCTGCGGGTTAGCCACA 61.246 61.111 12.85 0.00 44.73 4.17
1628 2463 0.828022 CCCACGGCAAGGAGTATACA 59.172 55.000 5.50 0.00 0.00 2.29
1650 2485 4.799917 GCTTATTATCACCCCGTCTTCTCC 60.800 50.000 0.00 0.00 0.00 3.71
1658 2497 1.148310 CAGCGCTTATTATCACCCCG 58.852 55.000 7.50 0.00 0.00 5.73
1687 2529 7.872483 ACAATGACCAGAACAATGAAAAATACC 59.128 33.333 0.00 0.00 0.00 2.73
1695 2537 5.008911 CAGAACACAATGACCAGAACAATGA 59.991 40.000 0.00 0.00 0.00 2.57
1705 2547 3.715628 AGCAAACAGAACACAATGACC 57.284 42.857 0.00 0.00 0.00 4.02
1830 2686 7.702386 CATCGGATATTCAGATGGACTACTAG 58.298 42.308 9.04 0.00 42.66 2.57
1849 2705 1.866015 AGGTTCACTGATCCATCGGA 58.134 50.000 8.57 0.00 36.97 4.55
1850 2706 3.819564 TTAGGTTCACTGATCCATCGG 57.180 47.619 8.57 0.00 39.11 4.18
1851 2707 6.102663 GGATATTAGGTTCACTGATCCATCG 58.897 44.000 8.57 0.00 35.73 3.84
1852 2708 6.071334 TCGGATATTAGGTTCACTGATCCATC 60.071 42.308 8.57 3.31 35.55 3.51
1853 2709 5.780282 TCGGATATTAGGTTCACTGATCCAT 59.220 40.000 8.57 0.00 35.55 3.41
1854 2710 5.144832 TCGGATATTAGGTTCACTGATCCA 58.855 41.667 8.57 0.00 35.55 3.41
1855 2711 5.723672 TCGGATATTAGGTTCACTGATCC 57.276 43.478 0.00 0.00 33.90 3.36
1856 2712 6.071334 TCCATCGGATATTAGGTTCACTGATC 60.071 42.308 0.00 0.00 0.00 2.92
1857 2713 5.780282 TCCATCGGATATTAGGTTCACTGAT 59.220 40.000 0.00 0.00 0.00 2.90
1858 2714 5.144832 TCCATCGGATATTAGGTTCACTGA 58.855 41.667 0.00 0.00 0.00 3.41
1859 2715 5.011125 ACTCCATCGGATATTAGGTTCACTG 59.989 44.000 0.00 0.00 0.00 3.66
1860 2716 5.148502 ACTCCATCGGATATTAGGTTCACT 58.851 41.667 0.00 0.00 0.00 3.41
1861 2717 5.470047 ACTCCATCGGATATTAGGTTCAC 57.530 43.478 0.00 0.00 0.00 3.18
1862 2718 6.072649 TGTACTCCATCGGATATTAGGTTCA 58.927 40.000 0.00 0.00 0.00 3.18
1863 2719 6.585695 TGTACTCCATCGGATATTAGGTTC 57.414 41.667 0.00 0.00 0.00 3.62
1864 2720 6.070767 CCATGTACTCCATCGGATATTAGGTT 60.071 42.308 0.00 0.00 0.00 3.50
1865 2721 5.422331 CCATGTACTCCATCGGATATTAGGT 59.578 44.000 0.00 0.00 0.00 3.08
1866 2722 5.422331 ACCATGTACTCCATCGGATATTAGG 59.578 44.000 0.00 0.00 0.00 2.69
1867 2723 6.531503 ACCATGTACTCCATCGGATATTAG 57.468 41.667 0.00 0.00 0.00 1.73
1868 2724 6.928348 AACCATGTACTCCATCGGATATTA 57.072 37.500 0.00 0.00 0.00 0.98
1869 2725 5.825593 AACCATGTACTCCATCGGATATT 57.174 39.130 0.00 0.00 0.00 1.28
1870 2726 5.306937 TGAAACCATGTACTCCATCGGATAT 59.693 40.000 0.00 0.00 0.00 1.63
1871 2727 4.651962 TGAAACCATGTACTCCATCGGATA 59.348 41.667 0.00 0.00 0.00 2.59
1872 2728 3.454447 TGAAACCATGTACTCCATCGGAT 59.546 43.478 0.00 0.00 0.00 4.18
1894 2750 0.609131 CATCTGCCCACGGTTTTCCT 60.609 55.000 0.00 0.00 37.95 3.36
1926 2782 1.234821 ACTTCCGCGAATTTTCTGCA 58.765 45.000 8.23 0.00 0.00 4.41
1936 2792 1.180456 TCACACCCTAACTTCCGCGA 61.180 55.000 8.23 0.00 0.00 5.87
1944 2800 5.167303 AGGAGATTCTTTCACACCCTAAC 57.833 43.478 0.00 0.00 0.00 2.34
1946 2802 5.843019 AAAGGAGATTCTTTCACACCCTA 57.157 39.130 0.00 0.00 32.01 3.53
1948 2804 4.559502 GCAAAAGGAGATTCTTTCACACCC 60.560 45.833 0.00 0.00 36.09 4.61
1954 2810 7.622893 AGATGTAGCAAAAGGAGATTCTTTC 57.377 36.000 0.00 0.00 36.09 2.62
1964 2820 3.865745 CGGTGACTAGATGTAGCAAAAGG 59.134 47.826 0.00 0.00 0.00 3.11
2024 3103 8.039603 TCTTTCTCAGCTTAGATAGATCGATC 57.960 38.462 17.91 17.91 31.26 3.69
2047 3126 8.337532 GCATGCATGTTTTAACTTTTCTTTTCT 58.662 29.630 26.79 0.00 0.00 2.52
2048 3127 8.121708 TGCATGCATGTTTTAACTTTTCTTTTC 58.878 29.630 26.79 5.09 0.00 2.29
2049 3128 7.909641 GTGCATGCATGTTTTAACTTTTCTTTT 59.090 29.630 25.64 0.00 0.00 2.27
2050 3129 7.408910 GTGCATGCATGTTTTAACTTTTCTTT 58.591 30.769 25.64 0.00 0.00 2.52
2051 3130 6.292274 CGTGCATGCATGTTTTAACTTTTCTT 60.292 34.615 28.25 0.00 0.00 2.52
2052 3131 5.175491 CGTGCATGCATGTTTTAACTTTTCT 59.825 36.000 28.25 0.00 0.00 2.52
2053 3132 5.365133 CGTGCATGCATGTTTTAACTTTTC 58.635 37.500 28.25 8.25 0.00 2.29
2054 3133 4.318689 GCGTGCATGCATGTTTTAACTTTT 60.319 37.500 34.08 0.00 35.52 2.27
2055 3134 3.184178 GCGTGCATGCATGTTTTAACTTT 59.816 39.130 34.08 0.00 35.52 2.66
2056 3135 2.730928 GCGTGCATGCATGTTTTAACTT 59.269 40.909 34.08 0.00 35.52 2.66
2057 3136 2.030007 AGCGTGCATGCATGTTTTAACT 60.030 40.909 34.08 21.55 37.31 2.24
2058 3137 2.090967 CAGCGTGCATGCATGTTTTAAC 59.909 45.455 34.08 19.88 37.31 2.01
2059 3138 2.326664 CAGCGTGCATGCATGTTTTAA 58.673 42.857 34.08 3.81 37.31 1.52
2060 3139 1.979897 CAGCGTGCATGCATGTTTTA 58.020 45.000 34.08 9.42 37.31 1.52
2061 3140 1.286354 GCAGCGTGCATGCATGTTTT 61.286 50.000 34.08 20.61 44.26 2.43
2062 3141 1.735198 GCAGCGTGCATGCATGTTT 60.735 52.632 34.08 22.79 44.26 2.83
2063 3142 2.126228 GCAGCGTGCATGCATGTT 60.126 55.556 34.08 28.51 44.26 2.71
2076 3155 2.410785 TGTATATCCGTACGTGCAGC 57.589 50.000 15.21 0.55 0.00 5.25
2077 3156 4.295870 ACATTGTATATCCGTACGTGCAG 58.704 43.478 15.21 0.00 0.00 4.41
2078 3157 4.310357 ACATTGTATATCCGTACGTGCA 57.690 40.909 15.21 2.23 0.00 4.57
2079 3158 5.646467 AAACATTGTATATCCGTACGTGC 57.354 39.130 15.21 0.00 0.00 5.34
2080 3159 7.224290 TCAAAACATTGTATATCCGTACGTG 57.776 36.000 15.21 5.96 0.00 4.49
2081 3160 9.188588 CTATCAAAACATTGTATATCCGTACGT 57.811 33.333 15.21 0.00 0.00 3.57
2082 3161 9.401873 TCTATCAAAACATTGTATATCCGTACG 57.598 33.333 8.69 8.69 0.00 3.67
2095 3174 9.450807 CGTTCAGAACTTTTCTATCAAAACATT 57.549 29.630 11.60 0.00 38.11 2.71
2096 3175 8.076178 CCGTTCAGAACTTTTCTATCAAAACAT 58.924 33.333 11.60 0.00 38.11 2.71
2097 3176 7.414436 CCGTTCAGAACTTTTCTATCAAAACA 58.586 34.615 11.60 0.00 38.11 2.83
2098 3177 6.856426 CCCGTTCAGAACTTTTCTATCAAAAC 59.144 38.462 11.60 0.00 38.11 2.43
2099 3178 6.768861 TCCCGTTCAGAACTTTTCTATCAAAA 59.231 34.615 11.60 0.00 38.11 2.44
2100 3179 6.292923 TCCCGTTCAGAACTTTTCTATCAAA 58.707 36.000 11.60 0.00 38.11 2.69
2101 3180 5.860611 TCCCGTTCAGAACTTTTCTATCAA 58.139 37.500 11.60 0.00 38.11 2.57
2102 3181 5.477607 TCCCGTTCAGAACTTTTCTATCA 57.522 39.130 11.60 0.00 38.11 2.15
2103 3182 5.220681 GCATCCCGTTCAGAACTTTTCTATC 60.221 44.000 11.60 0.00 38.11 2.08
2104 3183 4.636206 GCATCCCGTTCAGAACTTTTCTAT 59.364 41.667 11.60 0.00 38.11 1.98
2105 3184 4.000988 GCATCCCGTTCAGAACTTTTCTA 58.999 43.478 11.60 0.00 38.11 2.10
2106 3185 2.814336 GCATCCCGTTCAGAACTTTTCT 59.186 45.455 11.60 0.00 41.70 2.52
2107 3186 2.814336 AGCATCCCGTTCAGAACTTTTC 59.186 45.455 11.60 0.00 0.00 2.29
2108 3187 2.554032 CAGCATCCCGTTCAGAACTTTT 59.446 45.455 11.60 0.00 0.00 2.27
2109 3188 2.154462 CAGCATCCCGTTCAGAACTTT 58.846 47.619 11.60 0.00 0.00 2.66
2110 3189 1.347707 TCAGCATCCCGTTCAGAACTT 59.652 47.619 11.60 0.00 0.00 2.66
2111 3190 0.976641 TCAGCATCCCGTTCAGAACT 59.023 50.000 11.60 0.00 0.00 3.01
2112 3191 1.079503 GTCAGCATCCCGTTCAGAAC 58.920 55.000 2.85 2.85 0.00 3.01
2113 3192 0.684535 TGTCAGCATCCCGTTCAGAA 59.315 50.000 0.00 0.00 0.00 3.02
2114 3193 0.684535 TTGTCAGCATCCCGTTCAGA 59.315 50.000 0.00 0.00 0.00 3.27
2115 3194 1.081892 CTTGTCAGCATCCCGTTCAG 58.918 55.000 0.00 0.00 0.00 3.02
2116 3195 0.684535 TCTTGTCAGCATCCCGTTCA 59.315 50.000 0.00 0.00 0.00 3.18
2117 3196 1.338200 ACTCTTGTCAGCATCCCGTTC 60.338 52.381 0.00 0.00 0.00 3.95
2118 3197 0.687354 ACTCTTGTCAGCATCCCGTT 59.313 50.000 0.00 0.00 0.00 4.44
2119 3198 1.204941 GTACTCTTGTCAGCATCCCGT 59.795 52.381 0.00 0.00 0.00 5.28
2120 3199 1.478510 AGTACTCTTGTCAGCATCCCG 59.521 52.381 0.00 0.00 0.00 5.14
2121 3200 2.763448 AGAGTACTCTTGTCAGCATCCC 59.237 50.000 20.00 0.00 36.31 3.85
2122 3201 3.779759 CAGAGTACTCTTGTCAGCATCC 58.220 50.000 23.01 0.00 37.98 3.51
2123 3202 3.119173 AGCAGAGTACTCTTGTCAGCATC 60.119 47.826 23.01 4.69 37.98 3.91
2124 3203 2.830923 AGCAGAGTACTCTTGTCAGCAT 59.169 45.455 23.01 9.71 37.98 3.79
2125 3204 2.029560 CAGCAGAGTACTCTTGTCAGCA 60.030 50.000 23.01 0.00 37.98 4.41
2126 3205 2.230025 TCAGCAGAGTACTCTTGTCAGC 59.770 50.000 23.01 20.92 37.98 4.26
2127 3206 4.717233 ATCAGCAGAGTACTCTTGTCAG 57.283 45.455 23.01 12.27 37.98 3.51
2128 3207 6.350528 CCTTTATCAGCAGAGTACTCTTGTCA 60.351 42.308 23.01 8.11 37.98 3.58
2129 3208 6.039616 CCTTTATCAGCAGAGTACTCTTGTC 58.960 44.000 23.01 14.27 37.98 3.18
2130 3209 5.717178 TCCTTTATCAGCAGAGTACTCTTGT 59.283 40.000 23.01 10.15 37.98 3.16
2131 3210 6.214191 TCCTTTATCAGCAGAGTACTCTTG 57.786 41.667 23.01 18.84 37.98 3.02
2132 3211 6.859112 TTCCTTTATCAGCAGAGTACTCTT 57.141 37.500 23.01 10.76 37.98 2.85
2133 3212 6.183360 CCATTCCTTTATCAGCAGAGTACTCT 60.183 42.308 20.00 20.00 41.37 3.24
2134 3213 5.988561 CCATTCCTTTATCAGCAGAGTACTC 59.011 44.000 15.41 15.41 0.00 2.59
2135 3214 5.163258 CCCATTCCTTTATCAGCAGAGTACT 60.163 44.000 0.00 0.00 0.00 2.73
2136 3215 5.059833 CCCATTCCTTTATCAGCAGAGTAC 58.940 45.833 0.00 0.00 0.00 2.73
2137 3216 4.444876 GCCCATTCCTTTATCAGCAGAGTA 60.445 45.833 0.00 0.00 0.00 2.59
2138 3217 3.686691 GCCCATTCCTTTATCAGCAGAGT 60.687 47.826 0.00 0.00 0.00 3.24
2139 3218 2.883386 GCCCATTCCTTTATCAGCAGAG 59.117 50.000 0.00 0.00 0.00 3.35
2140 3219 2.241941 TGCCCATTCCTTTATCAGCAGA 59.758 45.455 0.00 0.00 0.00 4.26
2141 3220 2.360165 GTGCCCATTCCTTTATCAGCAG 59.640 50.000 0.00 0.00 0.00 4.24
2142 3221 2.378038 GTGCCCATTCCTTTATCAGCA 58.622 47.619 0.00 0.00 0.00 4.41
2143 3222 1.683385 GGTGCCCATTCCTTTATCAGC 59.317 52.381 0.00 0.00 0.00 4.26
2144 3223 1.949525 CGGTGCCCATTCCTTTATCAG 59.050 52.381 0.00 0.00 0.00 2.90
2145 3224 1.409521 CCGGTGCCCATTCCTTTATCA 60.410 52.381 0.00 0.00 0.00 2.15
2146 3225 1.318576 CCGGTGCCCATTCCTTTATC 58.681 55.000 0.00 0.00 0.00 1.75
2147 3226 0.629058 ACCGGTGCCCATTCCTTTAT 59.371 50.000 6.12 0.00 0.00 1.40
2148 3227 1.210967 CTACCGGTGCCCATTCCTTTA 59.789 52.381 19.93 0.00 0.00 1.85
2149 3228 0.034477 CTACCGGTGCCCATTCCTTT 60.034 55.000 19.93 0.00 0.00 3.11
2150 3229 1.205460 ACTACCGGTGCCCATTCCTT 61.205 55.000 19.93 0.00 0.00 3.36
2151 3230 1.615424 ACTACCGGTGCCCATTCCT 60.615 57.895 19.93 0.00 0.00 3.36
2152 3231 1.153229 GACTACCGGTGCCCATTCC 60.153 63.158 19.93 0.00 0.00 3.01
2153 3232 1.520787 CGACTACCGGTGCCCATTC 60.521 63.158 19.93 0.00 33.91 2.67
2154 3233 2.582436 CGACTACCGGTGCCCATT 59.418 61.111 19.93 0.00 33.91 3.16
2155 3234 4.157120 GCGACTACCGGTGCCCAT 62.157 66.667 19.93 0.00 39.04 4.00
2164 3243 2.125793 GGTCAACCGGCGACTACC 60.126 66.667 20.54 6.70 33.73 3.18
2175 3254 3.966026 CTCGAGGCGACCGGTCAAC 62.966 68.421 32.80 23.87 0.00 3.18
2176 3255 3.744719 CTCGAGGCGACCGGTCAA 61.745 66.667 32.80 10.45 0.00 3.18
2178 3257 4.176851 GACTCGAGGCGACCGGTC 62.177 72.222 25.28 25.28 0.00 4.79
2186 3265 4.208686 AATCCGGCGACTCGAGGC 62.209 66.667 18.41 14.00 0.00 4.70
2187 3266 2.026301 GAATCCGGCGACTCGAGG 59.974 66.667 18.41 4.87 0.00 4.63
2188 3267 1.298713 CTGAATCCGGCGACTCGAG 60.299 63.158 11.84 11.84 0.00 4.04
2189 3268 1.592400 AACTGAATCCGGCGACTCGA 61.592 55.000 9.30 0.00 0.00 4.04
2190 3269 1.140407 GAACTGAATCCGGCGACTCG 61.140 60.000 9.30 0.00 0.00 4.18
2191 3270 0.173708 AGAACTGAATCCGGCGACTC 59.826 55.000 9.30 1.75 0.00 3.36
2192 3271 0.608640 AAGAACTGAATCCGGCGACT 59.391 50.000 9.30 0.00 0.00 4.18
2193 3272 2.288961 TAAGAACTGAATCCGGCGAC 57.711 50.000 9.30 0.00 0.00 5.19
2194 3273 2.613691 GTTAAGAACTGAATCCGGCGA 58.386 47.619 9.30 0.00 0.00 5.54
2195 3274 1.323534 CGTTAAGAACTGAATCCGGCG 59.676 52.381 0.00 0.00 0.00 6.46
2196 3275 2.344025 ACGTTAAGAACTGAATCCGGC 58.656 47.619 0.00 0.00 0.00 6.13
2197 3276 3.612860 CAGACGTTAAGAACTGAATCCGG 59.387 47.826 0.00 0.00 32.88 5.14
2198 3277 4.235360 ACAGACGTTAAGAACTGAATCCG 58.765 43.478 6.68 0.00 34.26 4.18
2199 3278 6.363473 CAAACAGACGTTAAGAACTGAATCC 58.637 40.000 6.68 0.00 33.99 3.01
2200 3279 6.202188 TCCAAACAGACGTTAAGAACTGAATC 59.798 38.462 6.68 0.00 33.99 2.52
2201 3280 6.053005 TCCAAACAGACGTTAAGAACTGAAT 58.947 36.000 6.68 0.00 33.99 2.57
2202 3281 5.421277 TCCAAACAGACGTTAAGAACTGAA 58.579 37.500 6.68 0.00 33.99 3.02
2203 3282 5.013568 TCCAAACAGACGTTAAGAACTGA 57.986 39.130 6.68 0.00 33.99 3.41
2204 3283 5.388475 CGATCCAAACAGACGTTAAGAACTG 60.388 44.000 0.00 0.00 33.99 3.16
2205 3284 4.684703 CGATCCAAACAGACGTTAAGAACT 59.315 41.667 0.00 0.00 33.99 3.01
2206 3285 4.682860 TCGATCCAAACAGACGTTAAGAAC 59.317 41.667 0.00 0.00 33.99 3.01
2207 3286 4.873817 TCGATCCAAACAGACGTTAAGAA 58.126 39.130 0.00 0.00 33.99 2.52
2208 3287 4.508461 TCGATCCAAACAGACGTTAAGA 57.492 40.909 0.00 0.00 33.99 2.10
2209 3288 4.032900 CCATCGATCCAAACAGACGTTAAG 59.967 45.833 0.00 0.00 33.99 1.85
2210 3289 3.930229 CCATCGATCCAAACAGACGTTAA 59.070 43.478 0.00 0.00 33.99 2.01
2211 3290 3.056393 ACCATCGATCCAAACAGACGTTA 60.056 43.478 0.00 0.00 33.99 3.18
2212 3291 2.289444 ACCATCGATCCAAACAGACGTT 60.289 45.455 0.00 0.00 36.73 3.99
2213 3292 1.275291 ACCATCGATCCAAACAGACGT 59.725 47.619 0.00 0.00 0.00 4.34
2214 3293 2.010145 ACCATCGATCCAAACAGACG 57.990 50.000 0.00 0.00 0.00 4.18
2215 3294 2.678336 GGAACCATCGATCCAAACAGAC 59.322 50.000 0.00 0.00 35.71 3.51
2216 3295 2.676750 CGGAACCATCGATCCAAACAGA 60.677 50.000 0.00 0.00 35.34 3.41
2217 3296 1.665679 CGGAACCATCGATCCAAACAG 59.334 52.381 0.00 0.00 35.34 3.16
2218 3297 1.732941 CGGAACCATCGATCCAAACA 58.267 50.000 0.00 0.00 35.34 2.83
2219 3298 0.377203 GCGGAACCATCGATCCAAAC 59.623 55.000 0.00 0.00 35.34 2.93
2220 3299 0.035915 TGCGGAACCATCGATCCAAA 60.036 50.000 0.00 0.00 35.34 3.28
2221 3300 0.461870 CTGCGGAACCATCGATCCAA 60.462 55.000 0.00 0.00 35.34 3.53
2222 3301 1.143838 CTGCGGAACCATCGATCCA 59.856 57.895 0.00 0.00 35.34 3.41
2223 3302 2.247437 GCTGCGGAACCATCGATCC 61.247 63.158 0.00 0.00 0.00 3.36
2224 3303 1.493950 CTGCTGCGGAACCATCGATC 61.494 60.000 1.17 0.00 0.00 3.69
2225 3304 1.522355 CTGCTGCGGAACCATCGAT 60.522 57.895 1.17 0.00 0.00 3.59
2226 3305 2.125552 CTGCTGCGGAACCATCGA 60.126 61.111 1.17 0.00 0.00 3.59
2227 3306 1.091771 ATTCTGCTGCGGAACCATCG 61.092 55.000 24.95 0.00 31.12 3.84
2228 3307 1.953559 TATTCTGCTGCGGAACCATC 58.046 50.000 24.95 0.00 31.12 3.51
2229 3308 2.292267 CTTATTCTGCTGCGGAACCAT 58.708 47.619 24.95 12.83 31.12 3.55
2230 3309 1.003118 ACTTATTCTGCTGCGGAACCA 59.997 47.619 24.95 13.69 31.12 3.67
2231 3310 1.666189 GACTTATTCTGCTGCGGAACC 59.334 52.381 24.95 9.24 31.12 3.62
2232 3311 2.346803 TGACTTATTCTGCTGCGGAAC 58.653 47.619 24.95 12.98 31.12 3.62
2233 3312 2.742053 GTTGACTTATTCTGCTGCGGAA 59.258 45.455 24.69 24.69 33.01 4.30
2234 3313 2.346803 GTTGACTTATTCTGCTGCGGA 58.653 47.619 7.16 7.16 0.00 5.54
2235 3314 1.061131 CGTTGACTTATTCTGCTGCGG 59.939 52.381 0.95 0.95 0.00 5.69
2236 3315 1.527793 GCGTTGACTTATTCTGCTGCG 60.528 52.381 0.00 0.00 0.00 5.18
2237 3316 1.464608 TGCGTTGACTTATTCTGCTGC 59.535 47.619 0.00 0.00 0.00 5.25
2238 3317 2.472886 CGTGCGTTGACTTATTCTGCTG 60.473 50.000 0.00 0.00 0.00 4.41
2239 3318 1.726791 CGTGCGTTGACTTATTCTGCT 59.273 47.619 0.00 0.00 0.00 4.24
2240 3319 1.786928 GCGTGCGTTGACTTATTCTGC 60.787 52.381 0.00 0.00 0.00 4.26
2241 3320 1.459209 TGCGTGCGTTGACTTATTCTG 59.541 47.619 0.00 0.00 0.00 3.02
2242 3321 1.790755 TGCGTGCGTTGACTTATTCT 58.209 45.000 0.00 0.00 0.00 2.40
2243 3322 2.587612 TTGCGTGCGTTGACTTATTC 57.412 45.000 0.00 0.00 0.00 1.75
2244 3323 3.488489 GATTTGCGTGCGTTGACTTATT 58.512 40.909 0.00 0.00 0.00 1.40
2245 3324 2.473868 CGATTTGCGTGCGTTGACTTAT 60.474 45.455 0.00 0.00 34.64 1.73
2246 3325 1.136474 CGATTTGCGTGCGTTGACTTA 60.136 47.619 0.00 0.00 34.64 2.24
2247 3326 0.384230 CGATTTGCGTGCGTTGACTT 60.384 50.000 0.00 0.00 34.64 3.01
2248 3327 1.204062 CGATTTGCGTGCGTTGACT 59.796 52.632 0.00 0.00 34.64 3.41
2249 3328 3.723104 CGATTTGCGTGCGTTGAC 58.277 55.556 0.00 0.00 34.64 3.18
2259 3338 6.183360 GCAGGACCATATAATAGACGATTTGC 60.183 42.308 0.00 0.00 0.00 3.68
2260 3339 6.873605 TGCAGGACCATATAATAGACGATTTG 59.126 38.462 0.00 0.00 0.00 2.32
2261 3340 7.004555 TGCAGGACCATATAATAGACGATTT 57.995 36.000 0.00 0.00 0.00 2.17
2262 3341 6.605471 TGCAGGACCATATAATAGACGATT 57.395 37.500 0.00 0.00 0.00 3.34
2263 3342 6.798427 ATGCAGGACCATATAATAGACGAT 57.202 37.500 0.00 0.00 0.00 3.73
2264 3343 6.183360 GCTATGCAGGACCATATAATAGACGA 60.183 42.308 0.00 0.00 0.00 4.20
2265 3344 5.980116 GCTATGCAGGACCATATAATAGACG 59.020 44.000 0.00 0.00 0.00 4.18
2266 3345 7.069331 AGAGCTATGCAGGACCATATAATAGAC 59.931 40.741 0.00 0.00 0.00 2.59
2267 3346 7.069208 CAGAGCTATGCAGGACCATATAATAGA 59.931 40.741 0.00 0.00 0.00 1.98
2268 3347 7.208777 CAGAGCTATGCAGGACCATATAATAG 58.791 42.308 0.00 0.00 0.00 1.73
2269 3348 6.098838 CCAGAGCTATGCAGGACCATATAATA 59.901 42.308 1.83 0.00 0.00 0.98
2270 3349 5.104610 CCAGAGCTATGCAGGACCATATAAT 60.105 44.000 1.83 0.00 0.00 1.28
2271 3350 4.223700 CCAGAGCTATGCAGGACCATATAA 59.776 45.833 1.83 0.00 0.00 0.98
2272 3351 3.771479 CCAGAGCTATGCAGGACCATATA 59.229 47.826 1.83 0.00 0.00 0.86
2273 3352 2.570752 CCAGAGCTATGCAGGACCATAT 59.429 50.000 1.83 0.00 0.00 1.78
2274 3353 1.973515 CCAGAGCTATGCAGGACCATA 59.026 52.381 1.83 0.00 0.00 2.74
2275 3354 0.763652 CCAGAGCTATGCAGGACCAT 59.236 55.000 1.83 0.00 0.00 3.55
2276 3355 1.976132 GCCAGAGCTATGCAGGACCA 61.976 60.000 1.83 0.00 35.50 4.02
2277 3356 1.227793 GCCAGAGCTATGCAGGACC 60.228 63.158 1.83 0.00 35.50 4.46
2278 3357 1.593750 CGCCAGAGCTATGCAGGAC 60.594 63.158 1.83 0.00 36.60 3.85
2279 3358 1.742324 CTCGCCAGAGCTATGCAGGA 61.742 60.000 1.83 0.00 37.73 3.86
2280 3359 1.300775 CTCGCCAGAGCTATGCAGG 60.301 63.158 1.83 0.00 37.73 4.85
2281 3360 1.300775 CCTCGCCAGAGCTATGCAG 60.301 63.158 1.83 0.00 43.05 4.41
2282 3361 2.817424 CCTCGCCAGAGCTATGCA 59.183 61.111 1.83 0.00 43.05 3.96
2283 3362 2.664518 GCCTCGCCAGAGCTATGC 60.665 66.667 1.83 0.00 43.05 3.14
2296 3375 3.860930 TTGCAAGGGGAACGGCCTC 62.861 63.158 0.00 0.00 37.44 4.70
2297 3376 2.730129 ATTTGCAAGGGGAACGGCCT 62.730 55.000 0.00 0.00 36.66 5.19
2298 3377 2.225791 GATTTGCAAGGGGAACGGCC 62.226 60.000 0.00 0.00 0.00 6.13
2299 3378 1.215382 GATTTGCAAGGGGAACGGC 59.785 57.895 0.00 0.00 0.00 5.68
2300 3379 1.241315 ACGATTTGCAAGGGGAACGG 61.241 55.000 0.00 0.00 0.00 4.44
2301 3380 0.168128 GACGATTTGCAAGGGGAACG 59.832 55.000 0.00 0.00 0.00 3.95
2302 3381 0.168128 CGACGATTTGCAAGGGGAAC 59.832 55.000 0.00 0.00 0.00 3.62
2303 3382 1.582610 GCGACGATTTGCAAGGGGAA 61.583 55.000 0.00 0.00 31.51 3.97
2304 3383 2.038269 GCGACGATTTGCAAGGGGA 61.038 57.895 0.00 0.00 31.51 4.81
2305 3384 2.485122 GCGACGATTTGCAAGGGG 59.515 61.111 0.00 0.00 31.51 4.79
2306 3385 2.485122 GGCGACGATTTGCAAGGG 59.515 61.111 0.00 0.00 33.08 3.95
2307 3386 2.331893 TGGGCGACGATTTGCAAGG 61.332 57.895 0.00 0.00 33.08 3.61
2308 3387 1.154225 GTGGGCGACGATTTGCAAG 60.154 57.895 0.00 0.00 33.08 4.01
2309 3388 1.448119 TTGTGGGCGACGATTTGCAA 61.448 50.000 0.00 0.00 33.08 4.08
2310 3389 1.894282 TTGTGGGCGACGATTTGCA 60.894 52.632 0.00 0.00 33.08 4.08
2311 3390 1.442017 GTTGTGGGCGACGATTTGC 60.442 57.895 0.00 0.00 0.00 3.68
2312 3391 4.838959 GTTGTGGGCGACGATTTG 57.161 55.556 0.00 0.00 0.00 2.32
2318 3397 3.712881 GTGAGCGTTGTGGGCGAC 61.713 66.667 0.00 0.00 35.00 5.19
2319 3398 4.228567 TGTGAGCGTTGTGGGCGA 62.229 61.111 0.00 0.00 35.00 5.54
2320 3399 3.716006 CTGTGAGCGTTGTGGGCG 61.716 66.667 0.00 0.00 35.00 6.13
2321 3400 4.030452 GCTGTGAGCGTTGTGGGC 62.030 66.667 0.00 0.00 0.00 5.36
2322 3401 3.357079 GGCTGTGAGCGTTGTGGG 61.357 66.667 0.00 0.00 43.62 4.61
2323 3402 3.716006 CGGCTGTGAGCGTTGTGG 61.716 66.667 0.00 0.00 43.62 4.17
2324 3403 3.716006 CCGGCTGTGAGCGTTGTG 61.716 66.667 0.00 0.00 43.62 3.33
2337 3416 4.699522 AAAGAGGGTGTCGCCGGC 62.700 66.667 19.07 19.07 38.44 6.13
2338 3417 2.742372 CAAAGAGGGTGTCGCCGG 60.742 66.667 0.00 0.00 38.44 6.13
2339 3418 3.423154 GCAAAGAGGGTGTCGCCG 61.423 66.667 0.00 0.00 38.44 6.46
2340 3419 3.056328 GGCAAAGAGGGTGTCGCC 61.056 66.667 0.00 0.00 0.00 5.54
2341 3420 2.281484 TGGCAAAGAGGGTGTCGC 60.281 61.111 0.00 0.00 0.00 5.19
2342 3421 0.036010 ATCTGGCAAAGAGGGTGTCG 60.036 55.000 0.00 0.00 38.67 4.35
2343 3422 1.815003 CAATCTGGCAAAGAGGGTGTC 59.185 52.381 0.00 0.00 38.67 3.67
2344 3423 1.548582 CCAATCTGGCAAAGAGGGTGT 60.549 52.381 0.00 0.00 38.67 4.16
2345 3424 1.180029 CCAATCTGGCAAAGAGGGTG 58.820 55.000 0.00 0.00 38.67 4.61
2346 3425 0.779997 ACCAATCTGGCAAAGAGGGT 59.220 50.000 8.25 8.25 42.67 4.34
2347 3426 2.239654 TCTACCAATCTGGCAAAGAGGG 59.760 50.000 0.00 7.29 42.67 4.30
2348 3427 3.634397 TCTACCAATCTGGCAAAGAGG 57.366 47.619 0.00 0.00 42.67 3.69
2349 3428 3.314635 GCATCTACCAATCTGGCAAAGAG 59.685 47.826 0.00 0.00 42.67 2.85
2350 3429 3.282021 GCATCTACCAATCTGGCAAAGA 58.718 45.455 0.00 0.00 42.67 2.52
2351 3430 2.360165 GGCATCTACCAATCTGGCAAAG 59.640 50.000 0.00 0.00 42.67 2.77
2352 3431 2.378038 GGCATCTACCAATCTGGCAAA 58.622 47.619 0.00 0.00 42.67 3.68
2353 3432 1.746861 CGGCATCTACCAATCTGGCAA 60.747 52.381 0.00 0.00 42.67 4.52
2354 3433 0.179048 CGGCATCTACCAATCTGGCA 60.179 55.000 0.00 0.00 42.67 4.92
2355 3434 1.510480 GCGGCATCTACCAATCTGGC 61.510 60.000 0.00 0.00 42.67 4.85
2356 3435 0.107456 AGCGGCATCTACCAATCTGG 59.893 55.000 1.45 0.00 45.02 3.86
2357 3436 1.069823 AGAGCGGCATCTACCAATCTG 59.930 52.381 1.45 0.00 0.00 2.90
2358 3437 1.342819 GAGAGCGGCATCTACCAATCT 59.657 52.381 1.45 0.00 0.00 2.40
2359 3438 1.069204 TGAGAGCGGCATCTACCAATC 59.931 52.381 1.45 0.00 0.00 2.67
2360 3439 1.069823 CTGAGAGCGGCATCTACCAAT 59.930 52.381 1.45 0.00 0.00 3.16
2361 3440 0.461548 CTGAGAGCGGCATCTACCAA 59.538 55.000 1.45 0.00 0.00 3.67
2362 3441 1.395045 CCTGAGAGCGGCATCTACCA 61.395 60.000 1.45 0.00 0.00 3.25
2363 3442 1.109920 TCCTGAGAGCGGCATCTACC 61.110 60.000 1.45 0.00 0.00 3.18
2364 3443 0.965439 ATCCTGAGAGCGGCATCTAC 59.035 55.000 1.45 0.00 0.00 2.59
2365 3444 0.964700 CATCCTGAGAGCGGCATCTA 59.035 55.000 1.45 0.00 0.00 1.98
2366 3445 1.047596 ACATCCTGAGAGCGGCATCT 61.048 55.000 1.45 1.96 0.00 2.90
2367 3446 0.676184 TACATCCTGAGAGCGGCATC 59.324 55.000 1.45 0.00 0.00 3.91
2368 3447 1.274728 GATACATCCTGAGAGCGGCAT 59.725 52.381 1.45 0.00 0.00 4.40
2369 3448 0.676184 GATACATCCTGAGAGCGGCA 59.324 55.000 1.45 0.00 0.00 5.69
2370 3449 0.037790 GGATACATCCTGAGAGCGGC 60.038 60.000 0.72 0.00 43.73 6.53
2371 3450 0.242286 CGGATACATCCTGAGAGCGG 59.758 60.000 6.68 0.00 44.93 5.52
2372 3451 0.955178 ACGGATACATCCTGAGAGCG 59.045 55.000 6.68 0.00 44.93 5.03
2373 3452 1.271102 GGACGGATACATCCTGAGAGC 59.729 57.143 6.68 0.00 44.93 4.09
2374 3453 2.294791 GTGGACGGATACATCCTGAGAG 59.705 54.545 6.68 0.00 44.93 3.20
2375 3454 2.307768 GTGGACGGATACATCCTGAGA 58.692 52.381 6.68 0.00 44.93 3.27
2376 3455 1.001268 CGTGGACGGATACATCCTGAG 60.001 57.143 6.68 0.00 44.93 3.35
2377 3456 1.029681 CGTGGACGGATACATCCTGA 58.970 55.000 6.68 0.00 44.93 3.86
2378 3457 0.744874 ACGTGGACGGATACATCCTG 59.255 55.000 6.68 3.24 44.93 3.86
2379 3458 1.030457 GACGTGGACGGATACATCCT 58.970 55.000 0.00 0.00 44.93 3.24
2380 3459 0.031721 GGACGTGGACGGATACATCC 59.968 60.000 0.00 0.00 44.95 3.51
2381 3460 0.031721 GGGACGTGGACGGATACATC 59.968 60.000 0.00 0.00 44.95 3.06
2382 3461 1.397390 GGGGACGTGGACGGATACAT 61.397 60.000 0.00 0.00 44.95 2.29
2383 3462 2.053865 GGGGACGTGGACGGATACA 61.054 63.158 0.00 0.00 44.95 2.29
2384 3463 2.789715 GGGGGACGTGGACGGATAC 61.790 68.421 0.00 0.00 44.95 2.24
2385 3464 2.442643 GGGGGACGTGGACGGATA 60.443 66.667 0.00 0.00 44.95 2.59
2395 3474 2.993264 ACCTGTGTACGGGGGACG 60.993 66.667 14.08 0.00 46.75 4.79
2399 3478 0.388907 CGTTACACCTGTGTACGGGG 60.389 60.000 14.08 4.51 46.75 5.73
2400 3479 0.597568 TCGTTACACCTGTGTACGGG 59.402 55.000 21.04 8.32 44.81 5.28
2401 3480 1.666888 GGTCGTTACACCTGTGTACGG 60.667 57.143 21.04 12.92 44.81 4.02
2402 3481 1.001487 TGGTCGTTACACCTGTGTACG 60.001 52.381 9.56 14.85 44.81 3.67
2403 3482 2.796593 GTTGGTCGTTACACCTGTGTAC 59.203 50.000 9.56 1.53 44.81 2.90
2404 3483 2.224018 GGTTGGTCGTTACACCTGTGTA 60.224 50.000 6.05 6.05 44.42 2.90
2405 3484 1.473788 GGTTGGTCGTTACACCTGTGT 60.474 52.381 8.17 8.17 46.87 3.72
2406 3485 1.202604 AGGTTGGTCGTTACACCTGTG 60.203 52.381 0.00 0.00 37.34 3.66
2407 3486 1.125633 AGGTTGGTCGTTACACCTGT 58.874 50.000 5.78 0.00 37.34 4.00
2408 3487 1.069513 TCAGGTTGGTCGTTACACCTG 59.930 52.381 15.93 15.93 44.29 4.00
2409 3488 1.416243 TCAGGTTGGTCGTTACACCT 58.584 50.000 5.78 0.00 37.34 4.00
2410 3489 2.467566 ATCAGGTTGGTCGTTACACC 57.532 50.000 0.00 0.00 36.90 4.16
2411 3490 3.518590 CCTATCAGGTTGGTCGTTACAC 58.481 50.000 0.00 0.00 0.00 2.90
2412 3491 2.498481 CCCTATCAGGTTGGTCGTTACA 59.502 50.000 0.00 0.00 31.93 2.41
2413 3492 2.498885 ACCCTATCAGGTTGGTCGTTAC 59.501 50.000 0.00 0.00 36.44 2.50
2414 3493 2.823959 ACCCTATCAGGTTGGTCGTTA 58.176 47.619 0.00 0.00 36.44 3.18
2415 3494 1.652947 ACCCTATCAGGTTGGTCGTT 58.347 50.000 0.00 0.00 36.44 3.85
2416 3495 3.393854 ACCCTATCAGGTTGGTCGT 57.606 52.632 0.00 0.00 36.44 4.34
2423 3502 1.689273 GATCGCTGAACCCTATCAGGT 59.311 52.381 6.46 0.00 45.60 4.00
2424 3503 1.001406 GGATCGCTGAACCCTATCAGG 59.999 57.143 6.46 0.00 45.60 3.86
2426 3505 1.788229 TGGATCGCTGAACCCTATCA 58.212 50.000 3.24 0.00 0.00 2.15
2427 3506 2.693069 CATGGATCGCTGAACCCTATC 58.307 52.381 3.24 0.00 0.00 2.08
2428 3507 1.271054 GCATGGATCGCTGAACCCTAT 60.271 52.381 0.00 0.00 0.00 2.57
2429 3508 0.106708 GCATGGATCGCTGAACCCTA 59.893 55.000 0.00 0.00 0.00 3.53
2430 3509 1.153086 GCATGGATCGCTGAACCCT 60.153 57.895 0.00 0.00 0.00 4.34
2431 3510 0.749454 AAGCATGGATCGCTGAACCC 60.749 55.000 0.00 0.00 40.35 4.11
2432 3511 1.599542 GTAAGCATGGATCGCTGAACC 59.400 52.381 0.00 0.00 40.35 3.62
2433 3512 1.599542 GGTAAGCATGGATCGCTGAAC 59.400 52.381 0.00 0.00 40.35 3.18
2434 3513 1.209261 TGGTAAGCATGGATCGCTGAA 59.791 47.619 0.00 0.00 40.35 3.02
2435 3514 0.829990 TGGTAAGCATGGATCGCTGA 59.170 50.000 0.00 0.00 40.35 4.26
2436 3515 1.534163 CATGGTAAGCATGGATCGCTG 59.466 52.381 0.00 0.00 40.35 5.18
2437 3516 1.141657 ACATGGTAAGCATGGATCGCT 59.858 47.619 0.00 0.00 42.98 4.93
2438 3517 1.532868 GACATGGTAAGCATGGATCGC 59.467 52.381 0.00 0.00 34.56 4.58
2439 3518 2.804527 CTGACATGGTAAGCATGGATCG 59.195 50.000 0.00 0.00 34.56 3.69
2440 3519 3.562973 CACTGACATGGTAAGCATGGATC 59.437 47.826 0.00 0.00 34.56 3.36
2441 3520 3.548770 CACTGACATGGTAAGCATGGAT 58.451 45.455 0.00 0.00 34.56 3.41
2442 3521 2.940971 GCACTGACATGGTAAGCATGGA 60.941 50.000 0.00 0.00 34.56 3.41
2443 3522 1.402968 GCACTGACATGGTAAGCATGG 59.597 52.381 0.00 0.00 34.56 3.66
2444 3523 1.063027 CGCACTGACATGGTAAGCATG 59.937 52.381 0.00 0.00 36.22 4.06
2445 3524 1.372582 CGCACTGACATGGTAAGCAT 58.627 50.000 0.00 0.00 0.00 3.79
2446 3525 0.673333 CCGCACTGACATGGTAAGCA 60.673 55.000 0.00 0.00 0.00 3.91
2447 3526 0.391130 TCCGCACTGACATGGTAAGC 60.391 55.000 0.00 0.00 0.00 3.09
2448 3527 2.205074 GATCCGCACTGACATGGTAAG 58.795 52.381 0.00 0.00 0.00 2.34
2449 3528 1.470805 CGATCCGCACTGACATGGTAA 60.471 52.381 0.00 0.00 0.00 2.85
2450 3529 0.102300 CGATCCGCACTGACATGGTA 59.898 55.000 0.00 0.00 0.00 3.25
2451 3530 1.153568 CGATCCGCACTGACATGGT 60.154 57.895 0.00 0.00 0.00 3.55
2452 3531 0.249615 ATCGATCCGCACTGACATGG 60.250 55.000 0.00 0.00 0.00 3.66
2453 3532 1.524355 GAATCGATCCGCACTGACATG 59.476 52.381 0.00 0.00 0.00 3.21
2454 3533 1.136891 TGAATCGATCCGCACTGACAT 59.863 47.619 0.00 0.00 0.00 3.06
2455 3534 0.530288 TGAATCGATCCGCACTGACA 59.470 50.000 0.00 0.00 0.00 3.58
2456 3535 0.924090 GTGAATCGATCCGCACTGAC 59.076 55.000 14.92 0.00 0.00 3.51
2457 3536 0.179111 GGTGAATCGATCCGCACTGA 60.179 55.000 19.06 0.00 0.00 3.41
2458 3537 0.460109 TGGTGAATCGATCCGCACTG 60.460 55.000 19.06 0.00 0.00 3.66
2459 3538 0.465705 ATGGTGAATCGATCCGCACT 59.534 50.000 19.06 4.75 0.00 4.40
2460 3539 0.861837 GATGGTGAATCGATCCGCAC 59.138 55.000 14.22 14.22 0.00 5.34
2461 3540 0.463620 TGATGGTGAATCGATCCGCA 59.536 50.000 0.00 0.00 38.22 5.69
2462 3541 0.861837 GTGATGGTGAATCGATCCGC 59.138 55.000 0.00 0.00 38.22 5.54
2463 3542 1.860950 GTGTGATGGTGAATCGATCCG 59.139 52.381 0.00 0.00 38.22 4.18
2464 3543 2.609459 GTGTGTGATGGTGAATCGATCC 59.391 50.000 0.00 0.00 38.22 3.36
2465 3544 2.282555 CGTGTGTGATGGTGAATCGATC 59.717 50.000 0.00 0.00 38.22 3.69
2466 3545 2.270923 CGTGTGTGATGGTGAATCGAT 58.729 47.619 0.00 0.00 38.22 3.59
2467 3546 1.671556 CCGTGTGTGATGGTGAATCGA 60.672 52.381 0.00 0.00 38.22 3.59
2468 3547 0.721154 CCGTGTGTGATGGTGAATCG 59.279 55.000 0.00 0.00 38.22 3.34
2469 3548 1.808411 ACCGTGTGTGATGGTGAATC 58.192 50.000 0.00 0.00 42.98 2.52
2470 3549 2.614481 GGTACCGTGTGTGATGGTGAAT 60.614 50.000 0.00 0.00 44.44 2.57
2471 3550 1.270412 GGTACCGTGTGTGATGGTGAA 60.270 52.381 0.00 0.00 44.44 3.18
2472 3551 0.319083 GGTACCGTGTGTGATGGTGA 59.681 55.000 0.00 0.00 44.44 4.02
2473 3552 1.011968 CGGTACCGTGTGTGATGGTG 61.012 60.000 26.39 0.00 44.44 4.17
2474 3553 1.180456 TCGGTACCGTGTGTGATGGT 61.180 55.000 32.16 0.00 46.60 3.55
2475 3554 0.174845 ATCGGTACCGTGTGTGATGG 59.825 55.000 32.16 1.83 40.74 3.51
2476 3555 2.855660 TATCGGTACCGTGTGTGATG 57.144 50.000 32.16 2.61 40.74 3.07
2477 3556 4.139786 ACTATATCGGTACCGTGTGTGAT 58.860 43.478 32.16 19.78 40.74 3.06
2478 3557 3.544684 ACTATATCGGTACCGTGTGTGA 58.455 45.455 32.16 13.87 40.74 3.58
2479 3558 3.976793 ACTATATCGGTACCGTGTGTG 57.023 47.619 32.16 21.75 40.74 3.82
2480 3559 7.928307 ATTATACTATATCGGTACCGTGTGT 57.072 36.000 32.16 23.92 40.74 3.72
2482 3561 9.836864 TGATATTATACTATATCGGTACCGTGT 57.163 33.333 32.16 23.57 39.37 4.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.