Multiple sequence alignment - TraesCS2D01G180700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G180700 chr2D 100.000 2678 0 0 1 2678 125323417 125326094 0.000000e+00 4946.0
1 TraesCS2D01G180700 chr2D 88.608 316 36 0 1048 1363 460648977 460649292 4.180000e-103 385.0
2 TraesCS2D01G180700 chr2B 93.359 2108 70 17 91 2157 178337380 178339458 0.000000e+00 3053.0
3 TraesCS2D01G180700 chr2B 88.636 308 35 0 1056 1363 541687082 541687389 2.520000e-100 375.0
4 TraesCS2D01G180700 chr2B 97.727 44 0 1 2299 2341 731605708 731605751 1.030000e-09 75.0
5 TraesCS2D01G180700 chr2A 92.125 2184 69 31 1 2155 131681848 131683957 0.000000e+00 2985.0
6 TraesCS2D01G180700 chr2A 88.924 316 35 0 1048 1363 603523779 603524094 8.990000e-105 390.0
7 TraesCS2D01G180700 chr2A 94.667 150 7 1 2154 2303 219378860 219379008 5.770000e-57 231.0
8 TraesCS2D01G180700 chr2A 84.028 144 18 5 2336 2475 768058345 768058203 1.670000e-27 134.0
9 TraesCS2D01G180700 chr2A 88.060 67 5 3 2301 2365 70944372 70944307 2.860000e-10 76.8
10 TraesCS2D01G180700 chr2A 93.878 49 2 1 2302 2349 177665322 177665274 3.700000e-09 73.1
11 TraesCS2D01G180700 chr3D 89.235 353 36 2 998 1349 6337808 6338159 8.800000e-120 440.0
12 TraesCS2D01G180700 chr3D 91.803 61 5 0 2428 2488 478124010 478124070 4.750000e-13 86.1
13 TraesCS2D01G180700 chr3B 89.011 364 28 2 1001 1352 7187052 7186689 8.800000e-120 440.0
14 TraesCS2D01G180700 chr3B 90.751 173 14 2 2156 2327 712995935 712995764 2.070000e-56 230.0
15 TraesCS2D01G180700 chr3B 97.753 89 2 0 2337 2425 173555327 173555415 1.280000e-33 154.0
16 TraesCS2D01G180700 chr3B 86.614 127 11 4 2299 2422 736304981 736305104 4.650000e-28 135.0
17 TraesCS2D01G180700 chr3B 96.364 55 2 0 2428 2482 142869666 142869612 1.020000e-14 91.6
18 TraesCS2D01G180700 chr3B 96.226 53 2 0 2428 2480 636249662 636249714 1.320000e-13 87.9
19 TraesCS2D01G180700 chr3B 87.143 70 7 2 2273 2341 83312538 83312470 7.950000e-11 78.7
20 TraesCS2D01G180700 chr3A 92.105 304 24 0 1049 1352 14044682 14044379 1.900000e-116 429.0
21 TraesCS2D01G180700 chr3A 93.443 61 3 1 2473 2532 467347333 467347393 3.670000e-14 89.8
22 TraesCS2D01G180700 chr5A 94.667 150 7 1 2154 2303 114649288 114649436 5.770000e-57 231.0
23 TraesCS2D01G180700 chr5A 93.548 62 3 1 2472 2532 469275382 469275443 1.020000e-14 91.6
24 TraesCS2D01G180700 chr7A 94.631 149 7 1 2155 2303 440649388 440649241 2.070000e-56 230.0
25 TraesCS2D01G180700 chr6A 92.903 155 9 2 2151 2303 20022168 20022014 9.650000e-55 224.0
26 TraesCS2D01G180700 chr1B 90.533 169 15 1 2160 2327 558228405 558228237 3.470000e-54 222.0
27 TraesCS2D01G180700 chr6B 89.205 176 18 1 2161 2335 178029928 178029753 4.490000e-53 219.0
28 TraesCS2D01G180700 chr6B 95.699 93 3 1 2333 2425 15270461 15270370 5.970000e-32 148.0
29 TraesCS2D01G180700 chr5B 89.941 169 15 2 2161 2328 528574281 528574448 1.610000e-52 217.0
30 TraesCS2D01G180700 chr5B 91.667 60 3 2 2427 2484 592070454 592070395 6.140000e-12 82.4
31 TraesCS2D01G180700 chr4B 86.772 189 19 6 2155 2341 262945525 262945709 3.490000e-49 206.0
32 TraesCS2D01G180700 chr4B 96.667 90 3 0 2336 2425 662089798 662089709 1.660000e-32 150.0
33 TraesCS2D01G180700 chr4B 93.103 58 3 1 2428 2484 393352609 393352552 1.710000e-12 84.2
34 TraesCS2D01G180700 chr7B 90.345 145 11 2 2334 2475 217779078 217779222 1.270000e-43 187.0
35 TraesCS2D01G180700 chr7B 94.845 97 4 1 2329 2425 134635194 134635099 1.660000e-32 150.0
36 TraesCS2D01G180700 chr7B 95.652 92 3 1 2334 2425 186863148 186863238 2.150000e-31 147.0
37 TraesCS2D01G180700 chr7B 91.935 62 4 1 2472 2532 657549085 657549024 4.750000e-13 86.1
38 TraesCS2D01G180700 chr7B 91.935 62 4 1 2472 2532 697313108 697313169 4.750000e-13 86.1
39 TraesCS2D01G180700 chr7B 89.796 49 3 2 2301 2348 225512961 225513008 8.010000e-06 62.1
40 TraesCS2D01G180700 chr4A 95.652 92 4 0 2334 2425 222404978 222405069 5.970000e-32 148.0
41 TraesCS2D01G180700 chr4A 83.099 142 11 3 2334 2475 660678739 660678611 1.680000e-22 117.0
42 TraesCS2D01G180700 chr4A 91.176 68 4 2 2472 2537 459668454 459668521 1.020000e-14 91.6
43 TraesCS2D01G180700 chr4A 94.737 57 3 0 2428 2484 191062915 191062971 3.670000e-14 89.8
44 TraesCS2D01G180700 chr4A 93.878 49 2 1 2302 2349 503630588 503630540 3.700000e-09 73.1
45 TraesCS2D01G180700 chr4A 91.837 49 3 1 2302 2349 29074692 29074740 1.720000e-07 67.6
46 TraesCS2D01G180700 chr1A 88.793 116 13 0 1207 1322 485362718 485362603 2.780000e-30 143.0
47 TraesCS2D01G180700 chr1D 87.069 116 15 0 1207 1322 385812317 385812202 6.020000e-27 132.0
48 TraesCS2D01G180700 chr7D 91.935 62 4 1 2472 2532 36670975 36671036 4.750000e-13 86.1
49 TraesCS2D01G180700 chr7D 90.625 64 5 1 2472 2534 491253362 491253299 1.710000e-12 84.2
50 TraesCS2D01G180700 chr6D 91.935 62 4 1 2472 2532 457543771 457543832 4.750000e-13 86.1
51 TraesCS2D01G180700 chr5D 90.625 64 5 1 2472 2534 109810250 109810187 1.710000e-12 84.2
52 TraesCS2D01G180700 chr5D 91.667 48 1 3 2299 2344 546568791 546568745 2.230000e-06 63.9
53 TraesCS2D01G180700 chr4D 90.000 50 4 1 2301 2349 274467839 274467790 2.230000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G180700 chr2D 125323417 125326094 2677 False 4946 4946 100.000 1 2678 1 chr2D.!!$F1 2677
1 TraesCS2D01G180700 chr2B 178337380 178339458 2078 False 3053 3053 93.359 91 2157 1 chr2B.!!$F1 2066
2 TraesCS2D01G180700 chr2A 131681848 131683957 2109 False 2985 2985 92.125 1 2155 1 chr2A.!!$F1 2154


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
61 62 0.535335 TGGCCTATGGTGACTTCGTC 59.465 55.0 3.32 0.0 0.0 4.2 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1986 2044 0.396435 TCAGGCAGTACCACAACCAG 59.604 55.0 0.0 0.0 43.14 4.0 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 2.049767 TCGACTGCGACATGGCCTA 61.050 57.895 3.32 0.00 42.51 3.93
49 50 1.068083 CGACTGCGACATGGCCTAT 59.932 57.895 3.32 0.00 40.82 2.57
51 52 0.882042 GACTGCGACATGGCCTATGG 60.882 60.000 16.39 1.88 41.25 2.74
52 53 1.146930 CTGCGACATGGCCTATGGT 59.853 57.895 16.39 4.82 41.25 3.55
61 62 0.535335 TGGCCTATGGTGACTTCGTC 59.465 55.000 3.32 0.00 0.00 4.20
70 71 3.390135 TGGTGACTTCGTCAATCTCAAC 58.610 45.455 0.00 0.00 44.49 3.18
71 72 2.408704 GGTGACTTCGTCAATCTCAACG 59.591 50.000 0.00 0.00 44.49 4.10
72 73 2.058798 TGACTTCGTCAATCTCAACGC 58.941 47.619 0.00 0.00 39.78 4.84
74 75 2.668457 GACTTCGTCAATCTCAACGCAT 59.332 45.455 0.00 0.00 38.72 4.73
138 139 1.624312 TGTGGTGCGGTAAATACCTCA 59.376 47.619 7.94 3.26 44.25 3.86
143 144 3.118884 GGTGCGGTAAATACCTCAAGAGA 60.119 47.826 3.97 0.00 42.15 3.10
396 417 1.064758 ACTTTGATTGGGATGCCGCTA 60.065 47.619 0.00 0.00 0.00 4.26
524 545 2.167398 GACCCAGCTGCTCCACGTAA 62.167 60.000 8.66 0.00 0.00 3.18
531 552 2.436115 GCTCCACGTAAGCACCCC 60.436 66.667 15.20 0.00 45.62 4.95
532 553 2.125673 CTCCACGTAAGCACCCCG 60.126 66.667 0.00 0.00 45.62 5.73
645 678 1.202758 CCGGCCCAGCAATACTTATCA 60.203 52.381 0.00 0.00 0.00 2.15
734 767 2.440980 GCCCTGCCATTCTCCACC 60.441 66.667 0.00 0.00 0.00 4.61
915 948 2.526046 CCTTCCGGGTCTGGTTGGT 61.526 63.158 0.00 0.00 0.00 3.67
924 957 0.755327 GTCTGGTTGGTGCTGGGTTT 60.755 55.000 0.00 0.00 0.00 3.27
962 1004 2.364448 ACCGGAGAAGGGAGGAGC 60.364 66.667 9.46 0.00 35.02 4.70
963 1005 2.042435 CCGGAGAAGGGAGGAGCT 60.042 66.667 0.00 0.00 0.00 4.09
964 1006 2.430610 CCGGAGAAGGGAGGAGCTG 61.431 68.421 0.00 0.00 0.00 4.24
965 1007 2.907236 GGAGAAGGGAGGAGCTGC 59.093 66.667 0.00 0.00 0.00 5.25
985 1027 2.095516 GCTGCTCTGTTTCTTGGCTAAC 60.096 50.000 0.00 0.00 0.00 2.34
991 1033 3.139077 CTGTTTCTTGGCTAACTTCGGT 58.861 45.455 0.00 0.00 0.00 4.69
1685 1730 3.716195 CAGGGCATGACCGTCCCA 61.716 66.667 13.29 0.00 42.52 4.37
1986 2044 0.462759 GTGCATACTCTGGCTGGGTC 60.463 60.000 0.00 0.00 0.00 4.46
1987 2045 0.618680 TGCATACTCTGGCTGGGTCT 60.619 55.000 0.00 0.00 0.00 3.85
1988 2046 0.179062 GCATACTCTGGCTGGGTCTG 60.179 60.000 0.00 2.57 0.00 3.51
1989 2047 0.467384 CATACTCTGGCTGGGTCTGG 59.533 60.000 0.00 0.00 0.00 3.86
1990 2048 0.043334 ATACTCTGGCTGGGTCTGGT 59.957 55.000 0.00 0.00 0.00 4.00
2050 2108 0.748450 TGGAATATCGGGTGTCGGTC 59.252 55.000 0.00 0.00 39.77 4.79
2075 2133 1.976132 ATCTCAGGTGTCGGCATGGG 61.976 60.000 0.00 0.00 0.00 4.00
2105 2163 6.183360 CCTTTGATGAGGAAACTTATTCCGAC 60.183 42.308 1.81 2.09 44.43 4.79
2157 2215 7.999545 ACTGCTAAGATATCAGAGTGGTTAGTA 59.000 37.037 5.32 1.62 0.00 1.82
2158 2216 8.167605 TGCTAAGATATCAGAGTGGTTAGTAC 57.832 38.462 5.32 0.00 0.00 2.73
2159 2217 7.041303 TGCTAAGATATCAGAGTGGTTAGTACG 60.041 40.741 5.32 0.00 0.00 3.67
2160 2218 7.041235 GCTAAGATATCAGAGTGGTTAGTACGT 60.041 40.741 5.32 0.00 0.00 3.57
2161 2219 9.486497 CTAAGATATCAGAGTGGTTAGTACGTA 57.514 37.037 5.32 0.00 0.00 3.57
2162 2220 7.727331 AGATATCAGAGTGGTTAGTACGTAC 57.273 40.000 18.10 18.10 0.00 3.67
2163 2221 7.507829 AGATATCAGAGTGGTTAGTACGTACT 58.492 38.462 29.62 29.62 40.24 2.73
2164 2222 7.992033 AGATATCAGAGTGGTTAGTACGTACTT 59.008 37.037 31.58 14.02 37.73 2.24
2165 2223 5.869753 TCAGAGTGGTTAGTACGTACTTC 57.130 43.478 31.58 21.23 37.73 3.01
2166 2224 4.697352 TCAGAGTGGTTAGTACGTACTTCC 59.303 45.833 31.58 29.26 37.73 3.46
2167 2225 4.699257 CAGAGTGGTTAGTACGTACTTCCT 59.301 45.833 31.58 19.19 37.73 3.36
2168 2226 4.940654 AGAGTGGTTAGTACGTACTTCCTC 59.059 45.833 31.58 28.20 37.73 3.71
2169 2227 4.916183 AGTGGTTAGTACGTACTTCCTCT 58.084 43.478 31.58 29.51 37.73 3.69
2170 2228 4.699257 AGTGGTTAGTACGTACTTCCTCTG 59.301 45.833 30.58 0.00 37.73 3.35
2171 2229 4.457257 GTGGTTAGTACGTACTTCCTCTGT 59.543 45.833 31.58 9.16 37.73 3.41
2172 2230 5.048434 GTGGTTAGTACGTACTTCCTCTGTT 60.048 44.000 31.58 8.44 37.73 3.16
2173 2231 5.182001 TGGTTAGTACGTACTTCCTCTGTTC 59.818 44.000 31.58 12.40 37.73 3.18
2174 2232 5.392487 GGTTAGTACGTACTTCCTCTGTTCC 60.392 48.000 31.58 16.14 37.73 3.62
2175 2233 4.031636 AGTACGTACTTCCTCTGTTCCT 57.968 45.455 22.45 0.00 31.13 3.36
2176 2234 5.171339 AGTACGTACTTCCTCTGTTCCTA 57.829 43.478 22.45 0.00 31.13 2.94
2177 2235 5.564550 AGTACGTACTTCCTCTGTTCCTAA 58.435 41.667 22.45 0.00 31.13 2.69
2178 2236 6.006449 AGTACGTACTTCCTCTGTTCCTAAA 58.994 40.000 22.45 0.00 31.13 1.85
2179 2237 5.997384 ACGTACTTCCTCTGTTCCTAAAT 57.003 39.130 0.00 0.00 0.00 1.40
2180 2238 7.831193 AGTACGTACTTCCTCTGTTCCTAAATA 59.169 37.037 22.45 0.00 31.13 1.40
2181 2239 7.657023 ACGTACTTCCTCTGTTCCTAAATAT 57.343 36.000 0.00 0.00 0.00 1.28
2182 2240 8.757982 ACGTACTTCCTCTGTTCCTAAATATA 57.242 34.615 0.00 0.00 0.00 0.86
2183 2241 9.193806 ACGTACTTCCTCTGTTCCTAAATATAA 57.806 33.333 0.00 0.00 0.00 0.98
2184 2242 9.680315 CGTACTTCCTCTGTTCCTAAATATAAG 57.320 37.037 0.00 0.00 0.00 1.73
2187 2245 9.495382 ACTTCCTCTGTTCCTAAATATAAGTCT 57.505 33.333 0.00 0.00 0.00 3.24
2217 2275 7.877003 AGAGATTCTACTATGAACCACATACG 58.123 38.462 0.00 0.00 40.07 3.06
2218 2276 6.982852 AGATTCTACTATGAACCACATACGG 58.017 40.000 0.00 0.00 40.07 4.02
2219 2277 6.776116 AGATTCTACTATGAACCACATACGGA 59.224 38.462 0.00 0.00 40.07 4.69
2220 2278 6.971726 TTCTACTATGAACCACATACGGAT 57.028 37.500 0.00 0.00 40.07 4.18
2221 2279 6.327279 TCTACTATGAACCACATACGGATG 57.673 41.667 5.94 5.94 40.07 3.51
2223 2281 6.999871 TCTACTATGAACCACATACGGATGTA 59.000 38.462 14.23 0.00 44.82 2.29
2224 2282 6.665992 ACTATGAACCACATACGGATGTAT 57.334 37.500 14.23 5.54 44.82 2.29
2225 2283 7.770366 ACTATGAACCACATACGGATGTATA 57.230 36.000 14.23 6.48 44.82 1.47
2226 2284 8.362464 ACTATGAACCACATACGGATGTATAT 57.638 34.615 14.23 1.68 44.82 0.86
2227 2285 9.470399 ACTATGAACCACATACGGATGTATATA 57.530 33.333 14.23 7.10 44.82 0.86
2228 2286 9.952188 CTATGAACCACATACGGATGTATATAG 57.048 37.037 14.23 12.28 44.82 1.31
2229 2287 8.589701 ATGAACCACATACGGATGTATATAGA 57.410 34.615 14.23 0.00 44.82 1.98
2230 2288 8.589701 TGAACCACATACGGATGTATATAGAT 57.410 34.615 14.23 0.00 44.82 1.98
2231 2289 8.466798 TGAACCACATACGGATGTATATAGATG 58.533 37.037 14.23 0.00 44.82 2.90
2232 2290 6.806751 ACCACATACGGATGTATATAGATGC 58.193 40.000 14.23 0.00 44.82 3.91
2233 2291 6.379988 ACCACATACGGATGTATATAGATGCA 59.620 38.462 14.23 0.00 44.82 3.96
2234 2292 7.069950 ACCACATACGGATGTATATAGATGCAT 59.930 37.037 14.23 0.00 44.82 3.96
2235 2293 7.928167 CCACATACGGATGTATATAGATGCATT 59.072 37.037 14.23 1.23 44.82 3.56
2236 2294 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
2237 2295 9.890629 ACATACGGATGTATATAGATGCATTTT 57.109 29.630 12.79 0.00 44.77 1.82
2241 2299 9.809096 ACGGATGTATATAGATGCATTTTAGAG 57.191 33.333 11.19 0.00 38.38 2.43
2242 2300 9.809096 CGGATGTATATAGATGCATTTTAGAGT 57.191 33.333 11.19 0.00 38.38 3.24
2252 2310 8.885494 AGATGCATTTTAGAGTCTAGATTCAC 57.115 34.615 16.67 0.00 0.00 3.18
2253 2311 8.703743 AGATGCATTTTAGAGTCTAGATTCACT 58.296 33.333 16.67 0.00 0.00 3.41
2254 2312 8.885494 ATGCATTTTAGAGTCTAGATTCACTC 57.115 34.615 16.67 9.24 39.58 3.51
2255 2313 7.840931 TGCATTTTAGAGTCTAGATTCACTCA 58.159 34.615 16.67 3.12 41.43 3.41
2256 2314 8.481314 TGCATTTTAGAGTCTAGATTCACTCAT 58.519 33.333 16.67 2.03 41.43 2.90
2257 2315 9.323985 GCATTTTAGAGTCTAGATTCACTCATT 57.676 33.333 16.67 0.00 41.43 2.57
2261 2319 8.709386 TTAGAGTCTAGATTCACTCATTTTGC 57.291 34.615 16.67 0.00 41.43 3.68
2262 2320 6.945218 AGAGTCTAGATTCACTCATTTTGCT 58.055 36.000 16.67 0.00 41.43 3.91
2263 2321 7.041107 AGAGTCTAGATTCACTCATTTTGCTC 58.959 38.462 16.67 3.99 41.43 4.26
2264 2322 6.112058 AGTCTAGATTCACTCATTTTGCTCC 58.888 40.000 0.00 0.00 0.00 4.70
2265 2323 5.006165 GTCTAGATTCACTCATTTTGCTCCG 59.994 44.000 0.00 0.00 0.00 4.63
2266 2324 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2267 2325 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2268 2326 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2269 2327 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2270 2328 2.677836 TCACTCATTTTGCTCCGTATGC 59.322 45.455 0.00 0.00 0.00 3.14
2271 2329 2.419673 CACTCATTTTGCTCCGTATGCA 59.580 45.455 0.00 0.00 38.80 3.96
2272 2330 2.679837 ACTCATTTTGCTCCGTATGCAG 59.320 45.455 0.00 0.00 41.71 4.41
2273 2331 2.679837 CTCATTTTGCTCCGTATGCAGT 59.320 45.455 0.00 0.00 41.71 4.40
2274 2332 3.081061 TCATTTTGCTCCGTATGCAGTT 58.919 40.909 0.00 0.00 41.71 3.16
2275 2333 3.126858 TCATTTTGCTCCGTATGCAGTTC 59.873 43.478 0.00 0.00 41.71 3.01
2276 2334 2.177394 TTTGCTCCGTATGCAGTTCA 57.823 45.000 0.00 0.00 41.71 3.18
2277 2335 2.401583 TTGCTCCGTATGCAGTTCAT 57.598 45.000 0.00 0.00 41.71 2.57
2278 2336 3.535280 TTGCTCCGTATGCAGTTCATA 57.465 42.857 0.00 0.00 41.71 2.15
2279 2337 3.097877 TGCTCCGTATGCAGTTCATAG 57.902 47.619 0.00 0.00 38.27 2.23
2280 2338 2.430694 TGCTCCGTATGCAGTTCATAGT 59.569 45.455 0.00 0.00 38.27 2.12
2281 2339 2.797156 GCTCCGTATGCAGTTCATAGTG 59.203 50.000 0.00 0.00 38.27 2.74
2282 2340 3.490933 GCTCCGTATGCAGTTCATAGTGA 60.491 47.826 0.00 0.00 38.27 3.41
2283 2341 4.682787 CTCCGTATGCAGTTCATAGTGAA 58.317 43.478 0.00 0.00 38.27 3.18
2284 2342 5.079689 TCCGTATGCAGTTCATAGTGAAA 57.920 39.130 0.00 0.00 38.22 2.69
2285 2343 5.670485 TCCGTATGCAGTTCATAGTGAAAT 58.330 37.500 0.00 0.00 38.22 2.17
2286 2344 5.753438 TCCGTATGCAGTTCATAGTGAAATC 59.247 40.000 0.00 0.00 38.22 2.17
2287 2345 5.755375 CCGTATGCAGTTCATAGTGAAATCT 59.245 40.000 0.00 0.00 38.22 2.40
2288 2346 6.074088 CCGTATGCAGTTCATAGTGAAATCTC 60.074 42.308 0.00 0.00 38.22 2.75
2289 2347 6.699204 CGTATGCAGTTCATAGTGAAATCTCT 59.301 38.462 0.00 0.00 38.22 3.10
2290 2348 7.862873 CGTATGCAGTTCATAGTGAAATCTCTA 59.137 37.037 0.00 0.00 38.22 2.43
2291 2349 8.973378 GTATGCAGTTCATAGTGAAATCTCTAC 58.027 37.037 0.00 0.00 38.22 2.59
2292 2350 6.935167 TGCAGTTCATAGTGAAATCTCTACA 58.065 36.000 0.00 0.00 38.22 2.74
2293 2351 7.386059 TGCAGTTCATAGTGAAATCTCTACAA 58.614 34.615 0.00 0.00 38.22 2.41
2294 2352 7.877612 TGCAGTTCATAGTGAAATCTCTACAAA 59.122 33.333 0.00 0.00 38.22 2.83
2295 2353 8.386606 GCAGTTCATAGTGAAATCTCTACAAAG 58.613 37.037 0.00 0.00 38.22 2.77
2296 2354 9.645059 CAGTTCATAGTGAAATCTCTACAAAGA 57.355 33.333 0.00 0.00 38.22 2.52
2297 2355 9.646427 AGTTCATAGTGAAATCTCTACAAAGAC 57.354 33.333 0.00 0.00 38.22 3.01
2298 2356 9.646427 GTTCATAGTGAAATCTCTACAAAGACT 57.354 33.333 0.00 0.00 38.22 3.24
2309 2367 8.700439 ATCTCTACAAAGACTTATACTCCTCC 57.300 38.462 0.00 0.00 0.00 4.30
2310 2368 6.766944 TCTCTACAAAGACTTATACTCCTCCG 59.233 42.308 0.00 0.00 0.00 4.63
2311 2369 6.421485 TCTACAAAGACTTATACTCCTCCGT 58.579 40.000 0.00 0.00 0.00 4.69
2312 2370 5.579564 ACAAAGACTTATACTCCTCCGTC 57.420 43.478 0.00 0.00 0.00 4.79
2313 2371 4.401837 ACAAAGACTTATACTCCTCCGTCC 59.598 45.833 0.00 0.00 0.00 4.79
2314 2372 3.226682 AGACTTATACTCCTCCGTCCC 57.773 52.381 0.00 0.00 0.00 4.46
2315 2373 2.512896 AGACTTATACTCCTCCGTCCCA 59.487 50.000 0.00 0.00 0.00 4.37
2316 2374 3.053095 AGACTTATACTCCTCCGTCCCAA 60.053 47.826 0.00 0.00 0.00 4.12
2317 2375 3.703052 GACTTATACTCCTCCGTCCCAAA 59.297 47.826 0.00 0.00 0.00 3.28
2318 2376 4.098894 ACTTATACTCCTCCGTCCCAAAA 58.901 43.478 0.00 0.00 0.00 2.44
2319 2377 4.720273 ACTTATACTCCTCCGTCCCAAAAT 59.280 41.667 0.00 0.00 0.00 1.82
2320 2378 5.901276 ACTTATACTCCTCCGTCCCAAAATA 59.099 40.000 0.00 0.00 0.00 1.40
2321 2379 6.384886 ACTTATACTCCTCCGTCCCAAAATAA 59.615 38.462 0.00 0.00 0.00 1.40
2322 2380 3.629142 ACTCCTCCGTCCCAAAATAAG 57.371 47.619 0.00 0.00 0.00 1.73
2323 2381 2.910977 ACTCCTCCGTCCCAAAATAAGT 59.089 45.455 0.00 0.00 0.00 2.24
2324 2382 3.270877 CTCCTCCGTCCCAAAATAAGTG 58.729 50.000 0.00 0.00 0.00 3.16
2325 2383 2.640826 TCCTCCGTCCCAAAATAAGTGT 59.359 45.455 0.00 0.00 0.00 3.55
2326 2384 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
2327 2385 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
2328 2386 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
2329 2387 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
2330 2388 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
2331 2389 4.154195 CCGTCCCAAAATAAGTGTCTCAAG 59.846 45.833 0.00 0.00 0.00 3.02
2332 2390 4.378459 CGTCCCAAAATAAGTGTCTCAAGC 60.378 45.833 0.00 0.00 0.00 4.01
2333 2391 4.762251 GTCCCAAAATAAGTGTCTCAAGCT 59.238 41.667 0.00 0.00 0.00 3.74
2334 2392 5.241728 GTCCCAAAATAAGTGTCTCAAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
2335 2393 6.430000 GTCCCAAAATAAGTGTCTCAAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
2336 2394 6.655003 TCCCAAAATAAGTGTCTCAAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
2337 2395 6.431234 CCCAAAATAAGTGTCTCAAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
2338 2396 7.606456 CCCAAAATAAGTGTCTCAAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
2339 2397 8.443937 CCAAAATAAGTGTCTCAAGCTTAGTAC 58.556 37.037 0.00 0.00 0.00 2.73
2340 2398 9.209175 CAAAATAAGTGTCTCAAGCTTAGTACT 57.791 33.333 0.00 0.00 0.00 2.73
2341 2399 8.989653 AAATAAGTGTCTCAAGCTTAGTACTC 57.010 34.615 0.00 0.00 0.00 2.59
2342 2400 5.394224 AAGTGTCTCAAGCTTAGTACTCC 57.606 43.478 0.00 0.00 0.00 3.85
2343 2401 4.668636 AGTGTCTCAAGCTTAGTACTCCT 58.331 43.478 0.00 0.00 0.00 3.69
2344 2402 5.081032 AGTGTCTCAAGCTTAGTACTCCTT 58.919 41.667 0.00 0.00 0.00 3.36
2345 2403 5.184287 AGTGTCTCAAGCTTAGTACTCCTTC 59.816 44.000 0.00 0.00 0.00 3.46
2346 2404 4.463186 TGTCTCAAGCTTAGTACTCCTTCC 59.537 45.833 0.00 0.00 0.00 3.46
2347 2405 3.695060 TCTCAAGCTTAGTACTCCTTCCG 59.305 47.826 0.00 0.00 0.00 4.30
2348 2406 3.428532 TCAAGCTTAGTACTCCTTCCGT 58.571 45.455 0.00 0.00 0.00 4.69
2349 2407 3.830755 TCAAGCTTAGTACTCCTTCCGTT 59.169 43.478 0.00 0.00 0.00 4.44
2350 2408 4.082354 TCAAGCTTAGTACTCCTTCCGTTC 60.082 45.833 0.00 0.00 0.00 3.95
2351 2409 2.422832 AGCTTAGTACTCCTTCCGTTCG 59.577 50.000 0.00 0.00 0.00 3.95
2352 2410 2.479219 GCTTAGTACTCCTTCCGTTCGG 60.479 54.545 0.00 4.74 0.00 4.30
2353 2411 2.787473 TAGTACTCCTTCCGTTCGGA 57.213 50.000 10.00 10.00 0.00 4.55
2354 2412 1.915141 AGTACTCCTTCCGTTCGGAA 58.085 50.000 22.42 22.42 41.48 4.30
2355 2413 2.454538 AGTACTCCTTCCGTTCGGAAT 58.545 47.619 23.69 13.41 42.61 3.01
2356 2414 2.830321 AGTACTCCTTCCGTTCGGAATT 59.170 45.455 23.69 12.73 42.61 2.17
2357 2415 4.019174 AGTACTCCTTCCGTTCGGAATTA 58.981 43.478 23.69 14.90 42.61 1.40
2358 2416 4.648307 AGTACTCCTTCCGTTCGGAATTAT 59.352 41.667 23.69 13.65 42.61 1.28
2359 2417 4.482952 ACTCCTTCCGTTCGGAATTATT 57.517 40.909 23.69 9.16 42.61 1.40
2360 2418 4.840271 ACTCCTTCCGTTCGGAATTATTT 58.160 39.130 23.69 7.92 42.61 1.40
2361 2419 4.634443 ACTCCTTCCGTTCGGAATTATTTG 59.366 41.667 23.69 12.71 42.61 2.32
2362 2420 4.581868 TCCTTCCGTTCGGAATTATTTGT 58.418 39.130 23.69 0.00 42.61 2.83
2363 2421 4.632688 TCCTTCCGTTCGGAATTATTTGTC 59.367 41.667 23.69 0.00 42.61 3.18
2364 2422 4.634443 CCTTCCGTTCGGAATTATTTGTCT 59.366 41.667 23.69 0.00 42.61 3.41
2365 2423 5.220605 CCTTCCGTTCGGAATTATTTGTCTC 60.221 44.000 23.69 0.00 42.61 3.36
2366 2424 3.861113 TCCGTTCGGAATTATTTGTCTCG 59.139 43.478 11.66 0.00 0.00 4.04
2367 2425 3.861113 CCGTTCGGAATTATTTGTCTCGA 59.139 43.478 5.19 0.00 0.00 4.04
2368 2426 4.327898 CCGTTCGGAATTATTTGTCTCGAA 59.672 41.667 5.19 0.00 33.66 3.71
2369 2427 5.163933 CCGTTCGGAATTATTTGTCTCGAAA 60.164 40.000 5.19 0.00 37.00 3.46
2370 2428 6.301108 CGTTCGGAATTATTTGTCTCGAAAA 58.699 36.000 0.00 0.00 37.00 2.29
2371 2429 6.959311 CGTTCGGAATTATTTGTCTCGAAAAT 59.041 34.615 0.00 0.00 37.00 1.82
2372 2430 7.045612 CGTTCGGAATTATTTGTCTCGAAAATG 60.046 37.037 4.22 0.00 37.00 2.32
2373 2431 6.781138 TCGGAATTATTTGTCTCGAAAATGG 58.219 36.000 4.22 0.00 0.00 3.16
2374 2432 6.596106 TCGGAATTATTTGTCTCGAAAATGGA 59.404 34.615 4.22 0.00 0.00 3.41
2375 2433 7.282224 TCGGAATTATTTGTCTCGAAAATGGAT 59.718 33.333 4.22 0.00 0.00 3.41
2376 2434 7.376866 CGGAATTATTTGTCTCGAAAATGGATG 59.623 37.037 4.22 0.00 0.00 3.51
2377 2435 8.190784 GGAATTATTTGTCTCGAAAATGGATGT 58.809 33.333 4.22 0.00 0.00 3.06
2381 2439 9.613428 TTATTTGTCTCGAAAATGGATGTATCT 57.387 29.630 4.22 0.00 0.00 1.98
2383 2441 8.648557 TTTGTCTCGAAAATGGATGTATCTAG 57.351 34.615 0.00 0.00 0.00 2.43
2384 2442 7.582667 TGTCTCGAAAATGGATGTATCTAGA 57.417 36.000 0.00 0.00 0.00 2.43
2385 2443 8.007405 TGTCTCGAAAATGGATGTATCTAGAA 57.993 34.615 0.00 0.00 0.00 2.10
2386 2444 7.921214 TGTCTCGAAAATGGATGTATCTAGAAC 59.079 37.037 0.00 0.00 0.00 3.01
2387 2445 8.138712 GTCTCGAAAATGGATGTATCTAGAACT 58.861 37.037 0.00 0.00 0.00 3.01
2388 2446 9.350951 TCTCGAAAATGGATGTATCTAGAACTA 57.649 33.333 0.00 0.00 0.00 2.24
2389 2447 9.967346 CTCGAAAATGGATGTATCTAGAACTAA 57.033 33.333 0.00 0.00 0.00 2.24
2417 2475 7.649370 ATGTCTAGATACATTCATTTCTGCG 57.351 36.000 0.00 0.00 36.71 5.18
2418 2476 6.805713 TGTCTAGATACATTCATTTCTGCGA 58.194 36.000 0.00 0.00 0.00 5.10
2419 2477 6.697455 TGTCTAGATACATTCATTTCTGCGAC 59.303 38.462 0.00 0.00 0.00 5.19
2420 2478 6.697455 GTCTAGATACATTCATTTCTGCGACA 59.303 38.462 0.00 0.00 0.00 4.35
2421 2479 7.222805 GTCTAGATACATTCATTTCTGCGACAA 59.777 37.037 0.00 0.00 0.00 3.18
2422 2480 6.355397 AGATACATTCATTTCTGCGACAAG 57.645 37.500 0.00 0.00 0.00 3.16
2423 2481 5.877012 AGATACATTCATTTCTGCGACAAGT 59.123 36.000 0.00 0.00 0.00 3.16
2424 2482 7.041721 AGATACATTCATTTCTGCGACAAGTA 58.958 34.615 0.00 0.00 0.00 2.24
2425 2483 7.712639 AGATACATTCATTTCTGCGACAAGTAT 59.287 33.333 0.00 0.00 0.00 2.12
2426 2484 5.872635 ACATTCATTTCTGCGACAAGTATG 58.127 37.500 0.00 0.00 0.00 2.39
2427 2485 5.412594 ACATTCATTTCTGCGACAAGTATGT 59.587 36.000 0.00 0.00 44.25 2.29
2446 2504 9.698309 AAGTATGTCTAGATACATCCATTTTCG 57.302 33.333 0.00 0.00 40.52 3.46
2447 2505 9.078990 AGTATGTCTAGATACATCCATTTTCGA 57.921 33.333 0.00 0.00 40.52 3.71
2448 2506 9.347934 GTATGTCTAGATACATCCATTTTCGAG 57.652 37.037 0.00 0.00 40.52 4.04
2449 2507 7.582667 TGTCTAGATACATCCATTTTCGAGA 57.417 36.000 0.00 0.00 0.00 4.04
2450 2508 7.426410 TGTCTAGATACATCCATTTTCGAGAC 58.574 38.462 0.00 0.00 38.64 3.36
2451 2509 7.068226 TGTCTAGATACATCCATTTTCGAGACA 59.932 37.037 9.21 9.21 42.67 3.41
2452 2510 7.921214 GTCTAGATACATCCATTTTCGAGACAA 59.079 37.037 0.00 0.00 38.30 3.18
2453 2511 8.138074 TCTAGATACATCCATTTTCGAGACAAG 58.862 37.037 0.00 0.00 0.00 3.16
2454 2512 6.644347 AGATACATCCATTTTCGAGACAAGT 58.356 36.000 0.00 0.00 0.00 3.16
2455 2513 7.782049 AGATACATCCATTTTCGAGACAAGTA 58.218 34.615 0.00 0.00 0.00 2.24
2456 2514 8.258007 AGATACATCCATTTTCGAGACAAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
2457 2515 8.964476 ATACATCCATTTTCGAGACAAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
2458 2516 7.687941 ACATCCATTTTCGAGACAAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
2459 2517 7.752695 ACATCCATTTTCGAGACAAGTAATTC 58.247 34.615 0.00 0.00 0.00 2.17
2460 2518 6.737254 TCCATTTTCGAGACAAGTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
2461 2519 5.350365 TCCATTTTCGAGACAAGTAATTCCG 59.650 40.000 0.00 0.00 0.00 4.30
2462 2520 5.350365 CCATTTTCGAGACAAGTAATTCCGA 59.650 40.000 0.00 0.00 0.00 4.55
2463 2521 6.455646 CCATTTTCGAGACAAGTAATTCCGAG 60.456 42.308 0.00 0.00 0.00 4.63
2464 2522 4.778534 TTCGAGACAAGTAATTCCGAGT 57.221 40.909 0.00 0.00 0.00 4.18
2465 2523 4.092771 TCGAGACAAGTAATTCCGAGTG 57.907 45.455 0.00 0.00 0.00 3.51
2466 2524 3.119602 TCGAGACAAGTAATTCCGAGTGG 60.120 47.826 0.00 0.00 0.00 4.00
2467 2525 3.119602 CGAGACAAGTAATTCCGAGTGGA 60.120 47.826 0.00 0.00 44.61 4.02
2478 2536 3.897657 TCCGAGTGGAGGGAGTATAAT 57.102 47.619 0.00 0.00 40.17 1.28
2479 2537 4.194678 TCCGAGTGGAGGGAGTATAATT 57.805 45.455 0.00 0.00 40.17 1.40
2480 2538 4.553678 TCCGAGTGGAGGGAGTATAATTT 58.446 43.478 0.00 0.00 40.17 1.82
2481 2539 4.966805 TCCGAGTGGAGGGAGTATAATTTT 59.033 41.667 0.00 0.00 40.17 1.82
2482 2540 5.057149 CCGAGTGGAGGGAGTATAATTTTG 58.943 45.833 0.00 0.00 37.49 2.44
2483 2541 5.396436 CCGAGTGGAGGGAGTATAATTTTGT 60.396 44.000 0.00 0.00 37.49 2.83
2484 2542 6.183360 CCGAGTGGAGGGAGTATAATTTTGTA 60.183 42.308 0.00 0.00 37.49 2.41
2485 2543 7.442656 CGAGTGGAGGGAGTATAATTTTGTAT 58.557 38.462 0.00 0.00 0.00 2.29
2486 2544 7.931948 CGAGTGGAGGGAGTATAATTTTGTATT 59.068 37.037 0.00 0.00 0.00 1.89
2522 2580 9.349713 ACAAAGTTGAGATACTTATTTTGGACA 57.650 29.630 0.00 0.00 37.37 4.02
2523 2581 9.831737 CAAAGTTGAGATACTTATTTTGGACAG 57.168 33.333 0.00 0.00 37.37 3.51
2524 2582 9.793259 AAAGTTGAGATACTTATTTTGGACAGA 57.207 29.630 0.00 0.00 37.37 3.41
2525 2583 9.442047 AAGTTGAGATACTTATTTTGGACAGAG 57.558 33.333 0.00 0.00 36.62 3.35
2526 2584 8.043710 AGTTGAGATACTTATTTTGGACAGAGG 58.956 37.037 0.00 0.00 0.00 3.69
2527 2585 6.889198 TGAGATACTTATTTTGGACAGAGGG 58.111 40.000 0.00 0.00 0.00 4.30
2528 2586 6.672218 TGAGATACTTATTTTGGACAGAGGGA 59.328 38.462 0.00 0.00 0.00 4.20
2529 2587 7.130681 AGATACTTATTTTGGACAGAGGGAG 57.869 40.000 0.00 0.00 0.00 4.30
2530 2588 6.674419 AGATACTTATTTTGGACAGAGGGAGT 59.326 38.462 0.00 0.00 0.00 3.85
2531 2589 7.844779 AGATACTTATTTTGGACAGAGGGAGTA 59.155 37.037 0.00 0.00 0.00 2.59
2532 2590 6.301169 ACTTATTTTGGACAGAGGGAGTAG 57.699 41.667 0.00 0.00 0.00 2.57
2533 2591 5.785940 ACTTATTTTGGACAGAGGGAGTAGT 59.214 40.000 0.00 0.00 0.00 2.73
2534 2592 4.559862 ATTTTGGACAGAGGGAGTAGTG 57.440 45.455 0.00 0.00 0.00 2.74
2535 2593 1.938585 TTGGACAGAGGGAGTAGTGG 58.061 55.000 0.00 0.00 0.00 4.00
2536 2594 0.041238 TGGACAGAGGGAGTAGTGGG 59.959 60.000 0.00 0.00 0.00 4.61
2537 2595 0.688087 GGACAGAGGGAGTAGTGGGG 60.688 65.000 0.00 0.00 0.00 4.96
2538 2596 0.335361 GACAGAGGGAGTAGTGGGGA 59.665 60.000 0.00 0.00 0.00 4.81
2539 2597 0.790993 ACAGAGGGAGTAGTGGGGAA 59.209 55.000 0.00 0.00 0.00 3.97
2540 2598 1.196012 CAGAGGGAGTAGTGGGGAAC 58.804 60.000 0.00 0.00 0.00 3.62
2541 2599 0.324460 AGAGGGAGTAGTGGGGAACG 60.324 60.000 0.00 0.00 0.00 3.95
2542 2600 1.305887 AGGGAGTAGTGGGGAACGG 60.306 63.158 0.00 0.00 0.00 4.44
2543 2601 1.305549 GGGAGTAGTGGGGAACGGA 60.306 63.158 0.00 0.00 0.00 4.69
2544 2602 1.611474 GGGAGTAGTGGGGAACGGAC 61.611 65.000 0.00 0.00 0.00 4.79
2545 2603 1.509923 GAGTAGTGGGGAACGGACG 59.490 63.158 0.00 0.00 0.00 4.79
2546 2604 1.941999 GAGTAGTGGGGAACGGACGG 61.942 65.000 0.00 0.00 0.00 4.79
2547 2605 1.978617 GTAGTGGGGAACGGACGGA 60.979 63.158 0.00 0.00 0.00 4.69
2548 2606 1.679977 TAGTGGGGAACGGACGGAG 60.680 63.158 0.00 0.00 0.00 4.63
2568 2626 7.158243 CGGAGTACGTATTAGGAAATGAAAC 57.842 40.000 0.00 0.00 37.93 2.78
2569 2627 6.753279 CGGAGTACGTATTAGGAAATGAAACA 59.247 38.462 0.00 0.00 37.93 2.83
2570 2628 7.043590 CGGAGTACGTATTAGGAAATGAAACAG 60.044 40.741 0.00 0.00 37.93 3.16
2571 2629 7.763071 GGAGTACGTATTAGGAAATGAAACAGT 59.237 37.037 0.00 0.00 0.00 3.55
2572 2630 8.475331 AGTACGTATTAGGAAATGAAACAGTG 57.525 34.615 0.00 0.00 0.00 3.66
2573 2631 8.308931 AGTACGTATTAGGAAATGAAACAGTGA 58.691 33.333 0.00 0.00 0.00 3.41
2574 2632 7.972832 ACGTATTAGGAAATGAAACAGTGAA 57.027 32.000 0.00 0.00 0.00 3.18
2575 2633 8.029642 ACGTATTAGGAAATGAAACAGTGAAG 57.970 34.615 0.00 0.00 0.00 3.02
2576 2634 7.119262 ACGTATTAGGAAATGAAACAGTGAAGG 59.881 37.037 0.00 0.00 0.00 3.46
2577 2635 7.333423 CGTATTAGGAAATGAAACAGTGAAGGA 59.667 37.037 0.00 0.00 0.00 3.36
2578 2636 9.010029 GTATTAGGAAATGAAACAGTGAAGGAA 57.990 33.333 0.00 0.00 0.00 3.36
2579 2637 7.889873 TTAGGAAATGAAACAGTGAAGGAAA 57.110 32.000 0.00 0.00 0.00 3.13
2580 2638 6.149129 AGGAAATGAAACAGTGAAGGAAAC 57.851 37.500 0.00 0.00 0.00 2.78
2583 2641 6.183360 GGAAATGAAACAGTGAAGGAAACTGA 60.183 38.462 10.35 0.00 46.55 3.41
2584 2642 6.773976 AATGAAACAGTGAAGGAAACTGAA 57.226 33.333 10.35 0.00 46.55 3.02
2585 2643 5.818136 TGAAACAGTGAAGGAAACTGAAG 57.182 39.130 10.35 0.00 46.55 3.02
2586 2644 5.496556 TGAAACAGTGAAGGAAACTGAAGA 58.503 37.500 10.35 0.00 46.55 2.87
2587 2645 5.943416 TGAAACAGTGAAGGAAACTGAAGAA 59.057 36.000 10.35 0.00 46.55 2.52
2588 2646 6.432783 TGAAACAGTGAAGGAAACTGAAGAAA 59.567 34.615 10.35 0.00 46.55 2.52
2589 2647 5.819825 ACAGTGAAGGAAACTGAAGAAAC 57.180 39.130 10.35 0.00 46.55 2.78
2590 2648 5.253330 ACAGTGAAGGAAACTGAAGAAACA 58.747 37.500 10.35 0.00 46.55 2.83
2591 2649 5.355350 ACAGTGAAGGAAACTGAAGAAACAG 59.645 40.000 10.35 0.00 46.55 3.16
2592 2650 4.336713 AGTGAAGGAAACTGAAGAAACAGC 59.663 41.667 0.00 0.00 42.68 4.40
2593 2651 4.096382 GTGAAGGAAACTGAAGAAACAGCA 59.904 41.667 0.00 0.00 42.68 4.41
2594 2652 4.704540 TGAAGGAAACTGAAGAAACAGCAA 59.295 37.500 0.00 0.00 42.68 3.91
2595 2653 4.639135 AGGAAACTGAAGAAACAGCAAC 57.361 40.909 0.00 0.00 41.13 4.17
2596 2654 4.016444 AGGAAACTGAAGAAACAGCAACA 58.984 39.130 0.00 0.00 41.13 3.33
2597 2655 4.646492 AGGAAACTGAAGAAACAGCAACAT 59.354 37.500 0.00 0.00 41.13 2.71
2598 2656 5.127682 AGGAAACTGAAGAAACAGCAACATT 59.872 36.000 0.00 0.00 41.13 2.71
2599 2657 5.460091 GGAAACTGAAGAAACAGCAACATTC 59.540 40.000 0.00 0.00 41.06 2.67
2600 2658 5.841957 AACTGAAGAAACAGCAACATTCT 57.158 34.783 0.00 0.00 41.06 2.40
2601 2659 5.841957 ACTGAAGAAACAGCAACATTCTT 57.158 34.783 6.53 6.53 43.93 2.52
2605 2663 5.841957 AAGAAACAGCAACATTCTTCAGT 57.158 34.783 0.00 0.00 38.65 3.41
2606 2664 5.841957 AGAAACAGCAACATTCTTCAGTT 57.158 34.783 0.00 0.00 29.35 3.16
2607 2665 6.942532 AGAAACAGCAACATTCTTCAGTTA 57.057 33.333 0.00 0.00 29.35 2.24
2608 2666 7.333528 AGAAACAGCAACATTCTTCAGTTAA 57.666 32.000 0.00 0.00 29.35 2.01
2609 2667 7.420800 AGAAACAGCAACATTCTTCAGTTAAG 58.579 34.615 0.00 0.00 36.45 1.85
2610 2668 6.699575 AACAGCAACATTCTTCAGTTAAGT 57.300 33.333 0.00 0.00 36.51 2.24
2611 2669 6.064846 ACAGCAACATTCTTCAGTTAAGTG 57.935 37.500 3.73 3.73 36.51 3.16
2612 2670 5.822519 ACAGCAACATTCTTCAGTTAAGTGA 59.177 36.000 8.98 8.98 36.51 3.41
2613 2671 6.488006 ACAGCAACATTCTTCAGTTAAGTGAT 59.512 34.615 13.69 0.00 36.51 3.06
2614 2672 7.020010 CAGCAACATTCTTCAGTTAAGTGATC 58.980 38.462 13.69 0.00 36.51 2.92
2615 2673 6.017933 GCAACATTCTTCAGTTAAGTGATCG 58.982 40.000 13.69 8.45 36.51 3.69
2616 2674 6.128553 GCAACATTCTTCAGTTAAGTGATCGA 60.129 38.462 13.69 10.45 36.51 3.59
2617 2675 7.571244 GCAACATTCTTCAGTTAAGTGATCGAA 60.571 37.037 13.69 17.28 36.51 3.71
2618 2676 7.962964 ACATTCTTCAGTTAAGTGATCGAAA 57.037 32.000 20.38 11.70 36.51 3.46
2619 2677 7.797819 ACATTCTTCAGTTAAGTGATCGAAAC 58.202 34.615 20.38 0.00 36.51 2.78
2620 2678 7.441157 ACATTCTTCAGTTAAGTGATCGAAACA 59.559 33.333 20.38 4.72 36.51 2.83
2621 2679 6.764877 TCTTCAGTTAAGTGATCGAAACAC 57.235 37.500 13.69 15.21 36.51 3.32
2622 2680 6.277605 TCTTCAGTTAAGTGATCGAAACACA 58.722 36.000 21.81 5.22 40.25 3.72
2623 2681 6.420903 TCTTCAGTTAAGTGATCGAAACACAG 59.579 38.462 21.81 5.36 40.25 3.66
2624 2682 4.988540 TCAGTTAAGTGATCGAAACACAGG 59.011 41.667 21.81 9.16 40.25 4.00
2625 2683 4.988540 CAGTTAAGTGATCGAAACACAGGA 59.011 41.667 21.81 8.74 40.25 3.86
2626 2684 4.989168 AGTTAAGTGATCGAAACACAGGAC 59.011 41.667 21.81 16.75 40.25 3.85
2627 2685 3.753294 AAGTGATCGAAACACAGGACT 57.247 42.857 21.81 4.62 40.25 3.85
2628 2686 4.866508 AAGTGATCGAAACACAGGACTA 57.133 40.909 21.81 0.00 40.25 2.59
2629 2687 4.866508 AGTGATCGAAACACAGGACTAA 57.133 40.909 21.81 0.00 40.25 2.24
2630 2688 5.209818 AGTGATCGAAACACAGGACTAAA 57.790 39.130 21.81 0.00 40.25 1.85
2631 2689 5.794894 AGTGATCGAAACACAGGACTAAAT 58.205 37.500 21.81 2.38 40.25 1.40
2632 2690 5.869888 AGTGATCGAAACACAGGACTAAATC 59.130 40.000 21.81 0.00 40.25 2.17
2633 2691 5.869888 GTGATCGAAACACAGGACTAAATCT 59.130 40.000 17.21 0.00 38.05 2.40
2634 2692 5.869344 TGATCGAAACACAGGACTAAATCTG 59.131 40.000 0.00 0.00 37.07 2.90
2635 2693 5.462530 TCGAAACACAGGACTAAATCTGA 57.537 39.130 0.00 0.00 35.20 3.27
2636 2694 5.849510 TCGAAACACAGGACTAAATCTGAA 58.150 37.500 0.00 0.00 35.20 3.02
2637 2695 6.464222 TCGAAACACAGGACTAAATCTGAAT 58.536 36.000 0.00 0.00 35.20 2.57
2638 2696 6.590292 TCGAAACACAGGACTAAATCTGAATC 59.410 38.462 0.00 0.00 35.20 2.52
2639 2697 6.183360 CGAAACACAGGACTAAATCTGAATCC 60.183 42.308 0.00 0.00 35.20 3.01
2640 2698 6.380079 AACACAGGACTAAATCTGAATCCT 57.620 37.500 0.00 0.00 40.54 3.24
2641 2699 6.380079 ACACAGGACTAAATCTGAATCCTT 57.620 37.500 0.00 0.00 37.72 3.36
2642 2700 6.410540 ACACAGGACTAAATCTGAATCCTTC 58.589 40.000 0.00 0.00 37.72 3.46
2643 2701 5.521735 CACAGGACTAAATCTGAATCCTTCG 59.478 44.000 0.00 0.00 37.72 3.79
2644 2702 5.187967 ACAGGACTAAATCTGAATCCTTCGT 59.812 40.000 0.00 0.00 37.72 3.85
2645 2703 6.109359 CAGGACTAAATCTGAATCCTTCGTT 58.891 40.000 0.00 0.00 37.72 3.85
2646 2704 6.595716 CAGGACTAAATCTGAATCCTTCGTTT 59.404 38.462 0.00 0.00 37.72 3.60
2647 2705 6.819146 AGGACTAAATCTGAATCCTTCGTTTC 59.181 38.462 0.00 0.00 36.33 2.78
2648 2706 6.037281 GGACTAAATCTGAATCCTTCGTTTCC 59.963 42.308 0.00 0.00 0.00 3.13
2649 2707 4.946784 AAATCTGAATCCTTCGTTTCCG 57.053 40.909 0.00 0.00 0.00 4.30
2650 2708 3.887621 ATCTGAATCCTTCGTTTCCGA 57.112 42.857 0.00 0.00 42.41 4.55
2651 2709 3.232213 TCTGAATCCTTCGTTTCCGAG 57.768 47.619 0.00 0.00 45.24 4.63
2652 2710 2.094182 TCTGAATCCTTCGTTTCCGAGG 60.094 50.000 0.00 0.00 45.24 4.63
2653 2711 1.007580 GAATCCTTCGTTTCCGAGGC 58.992 55.000 0.00 0.00 45.24 4.70
2654 2712 0.392595 AATCCTTCGTTTCCGAGGCC 60.393 55.000 0.00 0.00 45.24 5.19
2655 2713 1.265454 ATCCTTCGTTTCCGAGGCCT 61.265 55.000 3.86 3.86 45.24 5.19
2656 2714 1.448013 CCTTCGTTTCCGAGGCCTC 60.448 63.158 23.79 23.79 45.24 4.70
2657 2715 1.448013 CTTCGTTTCCGAGGCCTCC 60.448 63.158 27.20 11.46 45.24 4.30
2658 2716 2.167398 CTTCGTTTCCGAGGCCTCCA 62.167 60.000 27.20 11.23 45.24 3.86
2659 2717 1.760479 TTCGTTTCCGAGGCCTCCAA 61.760 55.000 27.20 16.80 45.24 3.53
2660 2718 2.033194 CGTTTCCGAGGCCTCCAAC 61.033 63.158 27.20 23.03 35.63 3.77
2661 2719 1.674651 GTTTCCGAGGCCTCCAACC 60.675 63.158 27.20 8.95 0.00 3.77
2662 2720 1.846124 TTTCCGAGGCCTCCAACCT 60.846 57.895 27.20 0.00 41.41 3.50
2666 2724 3.495729 GAGGCCTCCAACCTCCAA 58.504 61.111 23.19 0.00 46.81 3.53
2667 2725 1.301293 GAGGCCTCCAACCTCCAAG 59.699 63.158 23.19 0.00 46.81 3.61
2668 2726 2.203549 GAGGCCTCCAACCTCCAAGG 62.204 65.000 23.19 0.00 46.81 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 5.125356 ACGGATGCATCATATCACTGAAAA 58.875 37.500 27.25 0.00 0.00 2.29
61 62 1.736126 AGCTCACATGCGTTGAGATTG 59.264 47.619 14.28 0.00 38.13 2.67
70 71 0.030504 AGAGATCGAGCTCACATGCG 59.969 55.000 30.48 0.00 37.37 4.73
71 72 1.066757 TGAGAGATCGAGCTCACATGC 59.933 52.381 30.48 14.98 36.31 4.06
72 73 3.433513 TTGAGAGATCGAGCTCACATG 57.566 47.619 30.48 0.00 40.57 3.21
74 75 2.165234 CCTTTGAGAGATCGAGCTCACA 59.835 50.000 30.48 27.13 40.57 3.58
396 417 1.812571 CATGCACCTACTCGCCTTTTT 59.187 47.619 0.00 0.00 0.00 1.94
645 678 1.139947 CGTGGGCCGTTTGTTTGTT 59.860 52.632 0.00 0.00 0.00 2.83
681 714 1.202486 TGGGGATAAGAACGCATCGAC 60.202 52.381 0.00 0.00 0.00 4.20
924 957 4.499019 GGTCAACTCAAAAGCCGATCAAAA 60.499 41.667 0.00 0.00 0.00 2.44
938 980 0.178944 TCCCTTCTCCGGTCAACTCA 60.179 55.000 0.00 0.00 0.00 3.41
962 1004 0.240411 GCCAAGAAACAGAGCAGCAG 59.760 55.000 0.00 0.00 0.00 4.24
963 1005 0.179009 AGCCAAGAAACAGAGCAGCA 60.179 50.000 0.00 0.00 0.00 4.41
964 1006 1.813513 TAGCCAAGAAACAGAGCAGC 58.186 50.000 0.00 0.00 0.00 5.25
965 1007 3.406764 AGTTAGCCAAGAAACAGAGCAG 58.593 45.455 0.00 0.00 0.00 4.24
1393 1435 3.459965 CTCCCTCTGCTGCGAGCT 61.460 66.667 13.52 0.00 42.97 4.09
1796 1846 6.744082 GGAATAAAATTGACCGACTTAAACCG 59.256 38.462 0.00 0.00 0.00 4.44
1986 2044 0.396435 TCAGGCAGTACCACAACCAG 59.604 55.000 0.00 0.00 43.14 4.00
1987 2045 1.064003 ATCAGGCAGTACCACAACCA 58.936 50.000 0.00 0.00 43.14 3.67
1988 2046 1.812571 CAATCAGGCAGTACCACAACC 59.187 52.381 0.00 0.00 43.14 3.77
1989 2047 1.812571 CCAATCAGGCAGTACCACAAC 59.187 52.381 0.00 0.00 43.14 3.32
1990 2048 1.423541 ACCAATCAGGCAGTACCACAA 59.576 47.619 0.00 0.00 43.14 3.33
2050 2108 0.456824 CCGACACCTGAGATCACACG 60.457 60.000 0.00 0.00 0.00 4.49
2105 2163 2.088423 AGCACTCAGAAGACTCGGTAG 58.912 52.381 0.00 0.00 0.00 3.18
2157 2215 5.997384 ATTTAGGAACAGAGGAAGTACGT 57.003 39.130 0.00 0.00 0.00 3.57
2158 2216 9.680315 CTTATATTTAGGAACAGAGGAAGTACG 57.320 37.037 0.00 0.00 0.00 3.67
2161 2219 9.495382 AGACTTATATTTAGGAACAGAGGAAGT 57.505 33.333 0.00 0.00 0.00 3.01
2191 2249 9.000486 CGTATGTGGTTCATAGTAGAATCTCTA 58.000 37.037 0.00 0.00 39.36 2.43
2192 2250 7.040340 CCGTATGTGGTTCATAGTAGAATCTCT 60.040 40.741 0.00 0.00 39.36 3.10
2193 2251 7.040617 TCCGTATGTGGTTCATAGTAGAATCTC 60.041 40.741 0.00 0.00 39.36 2.75
2194 2252 6.776116 TCCGTATGTGGTTCATAGTAGAATCT 59.224 38.462 0.00 0.00 39.36 2.40
2195 2253 6.978338 TCCGTATGTGGTTCATAGTAGAATC 58.022 40.000 0.00 0.00 39.36 2.52
2196 2254 6.971726 TCCGTATGTGGTTCATAGTAGAAT 57.028 37.500 0.00 0.00 39.36 2.40
2197 2255 6.322969 ACATCCGTATGTGGTTCATAGTAGAA 59.677 38.462 0.00 0.00 44.79 2.10
2198 2256 5.831525 ACATCCGTATGTGGTTCATAGTAGA 59.168 40.000 0.00 0.00 44.79 2.59
2199 2257 6.085555 ACATCCGTATGTGGTTCATAGTAG 57.914 41.667 0.00 0.00 44.79 2.57
2200 2258 7.770366 ATACATCCGTATGTGGTTCATAGTA 57.230 36.000 3.56 0.00 45.99 1.82
2201 2259 6.665992 ATACATCCGTATGTGGTTCATAGT 57.334 37.500 3.56 0.00 45.99 2.12
2202 2260 9.952188 CTATATACATCCGTATGTGGTTCATAG 57.048 37.037 3.56 0.80 45.99 2.23
2203 2261 9.689501 TCTATATACATCCGTATGTGGTTCATA 57.310 33.333 3.56 0.00 45.99 2.15
2204 2262 8.589701 TCTATATACATCCGTATGTGGTTCAT 57.410 34.615 3.56 0.00 45.99 2.57
2205 2263 8.466798 CATCTATATACATCCGTATGTGGTTCA 58.533 37.037 3.56 0.00 45.99 3.18
2206 2264 7.435488 GCATCTATATACATCCGTATGTGGTTC 59.565 40.741 3.56 0.00 45.99 3.62
2207 2265 7.093509 TGCATCTATATACATCCGTATGTGGTT 60.094 37.037 3.56 0.00 45.99 3.67
2208 2266 6.379988 TGCATCTATATACATCCGTATGTGGT 59.620 38.462 3.56 0.00 45.99 4.16
2209 2267 6.805713 TGCATCTATATACATCCGTATGTGG 58.194 40.000 3.56 0.00 45.99 4.17
2210 2268 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
2215 2273 9.809096 CTCTAAAATGCATCTATATACATCCGT 57.191 33.333 0.00 0.00 0.00 4.69
2216 2274 9.809096 ACTCTAAAATGCATCTATATACATCCG 57.191 33.333 0.00 0.00 0.00 4.18
2226 2284 9.973450 GTGAATCTAGACTCTAAAATGCATCTA 57.027 33.333 0.00 0.00 0.00 1.98
2227 2285 8.703743 AGTGAATCTAGACTCTAAAATGCATCT 58.296 33.333 0.00 0.00 0.00 2.90
2228 2286 8.885494 AGTGAATCTAGACTCTAAAATGCATC 57.115 34.615 0.00 0.00 0.00 3.91
2229 2287 8.481314 TGAGTGAATCTAGACTCTAAAATGCAT 58.519 33.333 2.46 0.00 39.54 3.96
2230 2288 7.840931 TGAGTGAATCTAGACTCTAAAATGCA 58.159 34.615 2.46 0.00 39.54 3.96
2231 2289 8.885494 ATGAGTGAATCTAGACTCTAAAATGC 57.115 34.615 2.46 0.00 39.54 3.56
2235 2293 9.155975 GCAAAATGAGTGAATCTAGACTCTAAA 57.844 33.333 2.46 0.00 39.54 1.85
2236 2294 8.535335 AGCAAAATGAGTGAATCTAGACTCTAA 58.465 33.333 2.46 0.00 39.54 2.10
2237 2295 8.072321 AGCAAAATGAGTGAATCTAGACTCTA 57.928 34.615 2.46 0.00 39.54 2.43
2238 2296 6.945218 AGCAAAATGAGTGAATCTAGACTCT 58.055 36.000 2.46 0.00 39.54 3.24
2239 2297 6.257630 GGAGCAAAATGAGTGAATCTAGACTC 59.742 42.308 0.00 0.00 39.31 3.36
2240 2298 6.112058 GGAGCAAAATGAGTGAATCTAGACT 58.888 40.000 0.00 0.00 0.00 3.24
2241 2299 5.006165 CGGAGCAAAATGAGTGAATCTAGAC 59.994 44.000 0.00 0.00 0.00 2.59
2242 2300 5.111989 CGGAGCAAAATGAGTGAATCTAGA 58.888 41.667 0.00 0.00 0.00 2.43
2243 2301 4.872691 ACGGAGCAAAATGAGTGAATCTAG 59.127 41.667 0.00 0.00 0.00 2.43
2244 2302 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2245 2303 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2246 2304 5.505286 CATACGGAGCAAAATGAGTGAATC 58.495 41.667 0.00 0.00 0.00 2.52
2247 2305 4.201950 GCATACGGAGCAAAATGAGTGAAT 60.202 41.667 0.00 0.00 0.00 2.57
2248 2306 3.126858 GCATACGGAGCAAAATGAGTGAA 59.873 43.478 0.00 0.00 0.00 3.18
2249 2307 2.677836 GCATACGGAGCAAAATGAGTGA 59.322 45.455 0.00 0.00 0.00 3.41
2250 2308 2.419673 TGCATACGGAGCAAAATGAGTG 59.580 45.455 0.00 0.00 39.39 3.51
2251 2309 2.679837 CTGCATACGGAGCAAAATGAGT 59.320 45.455 0.00 0.00 42.17 3.41
2252 2310 2.679837 ACTGCATACGGAGCAAAATGAG 59.320 45.455 0.00 0.00 42.17 2.90
2253 2311 2.710377 ACTGCATACGGAGCAAAATGA 58.290 42.857 0.00 0.00 42.17 2.57
2254 2312 3.119884 TGAACTGCATACGGAGCAAAATG 60.120 43.478 0.00 0.00 42.17 2.32
2255 2313 3.081061 TGAACTGCATACGGAGCAAAAT 58.919 40.909 0.00 0.00 42.17 1.82
2256 2314 2.499197 TGAACTGCATACGGAGCAAAA 58.501 42.857 0.00 0.00 42.17 2.44
2257 2315 2.177394 TGAACTGCATACGGAGCAAA 57.823 45.000 0.00 0.00 42.17 3.68
2258 2316 2.401583 ATGAACTGCATACGGAGCAA 57.598 45.000 0.00 0.00 42.17 3.91
2259 2317 2.430694 ACTATGAACTGCATACGGAGCA 59.569 45.455 0.00 0.00 38.44 4.26
2260 2318 2.797156 CACTATGAACTGCATACGGAGC 59.203 50.000 0.00 0.00 38.44 4.70
2261 2319 4.307443 TCACTATGAACTGCATACGGAG 57.693 45.455 0.00 0.00 38.44 4.63
2262 2320 4.729227 TTCACTATGAACTGCATACGGA 57.271 40.909 0.00 0.00 38.44 4.69
2263 2321 5.755375 AGATTTCACTATGAACTGCATACGG 59.245 40.000 0.00 0.00 35.89 4.02
2264 2322 6.699204 AGAGATTTCACTATGAACTGCATACG 59.301 38.462 0.00 0.00 35.89 3.06
2265 2323 8.973378 GTAGAGATTTCACTATGAACTGCATAC 58.027 37.037 0.00 0.00 35.89 2.39
2266 2324 8.695456 TGTAGAGATTTCACTATGAACTGCATA 58.305 33.333 0.00 0.00 35.89 3.14
2267 2325 7.559486 TGTAGAGATTTCACTATGAACTGCAT 58.441 34.615 0.00 0.00 35.89 3.96
2268 2326 6.935167 TGTAGAGATTTCACTATGAACTGCA 58.065 36.000 0.00 0.00 35.89 4.41
2269 2327 7.834068 TTGTAGAGATTTCACTATGAACTGC 57.166 36.000 0.00 0.00 35.89 4.40
2270 2328 9.645059 TCTTTGTAGAGATTTCACTATGAACTG 57.355 33.333 0.00 0.00 35.89 3.16
2271 2329 9.646427 GTCTTTGTAGAGATTTCACTATGAACT 57.354 33.333 0.00 0.00 35.89 3.01
2272 2330 9.646427 AGTCTTTGTAGAGATTTCACTATGAAC 57.354 33.333 0.00 0.00 35.89 3.18
2283 2341 9.138596 GGAGGAGTATAAGTCTTTGTAGAGATT 57.861 37.037 0.00 0.00 0.00 2.40
2284 2342 7.446013 CGGAGGAGTATAAGTCTTTGTAGAGAT 59.554 40.741 0.00 0.00 0.00 2.75
2285 2343 6.766944 CGGAGGAGTATAAGTCTTTGTAGAGA 59.233 42.308 0.00 0.00 0.00 3.10
2286 2344 6.543100 ACGGAGGAGTATAAGTCTTTGTAGAG 59.457 42.308 0.00 0.00 0.00 2.43
2287 2345 6.421485 ACGGAGGAGTATAAGTCTTTGTAGA 58.579 40.000 0.00 0.00 0.00 2.59
2288 2346 6.238703 GGACGGAGGAGTATAAGTCTTTGTAG 60.239 46.154 0.00 0.00 0.00 2.74
2289 2347 5.591877 GGACGGAGGAGTATAAGTCTTTGTA 59.408 44.000 0.00 0.00 0.00 2.41
2290 2348 4.401837 GGACGGAGGAGTATAAGTCTTTGT 59.598 45.833 0.00 0.00 0.00 2.83
2291 2349 4.202131 GGGACGGAGGAGTATAAGTCTTTG 60.202 50.000 0.00 0.00 0.00 2.77
2292 2350 3.959449 GGGACGGAGGAGTATAAGTCTTT 59.041 47.826 0.00 0.00 0.00 2.52
2293 2351 3.053095 TGGGACGGAGGAGTATAAGTCTT 60.053 47.826 0.00 0.00 0.00 3.01
2294 2352 2.512896 TGGGACGGAGGAGTATAAGTCT 59.487 50.000 0.00 0.00 0.00 3.24
2295 2353 2.941480 TGGGACGGAGGAGTATAAGTC 58.059 52.381 0.00 0.00 0.00 3.01
2296 2354 3.393426 TTGGGACGGAGGAGTATAAGT 57.607 47.619 0.00 0.00 0.00 2.24
2297 2355 4.748277 TTTTGGGACGGAGGAGTATAAG 57.252 45.455 0.00 0.00 0.00 1.73
2298 2356 6.384886 ACTTATTTTGGGACGGAGGAGTATAA 59.615 38.462 0.00 0.00 0.00 0.98
2299 2357 5.901276 ACTTATTTTGGGACGGAGGAGTATA 59.099 40.000 0.00 0.00 0.00 1.47
2300 2358 4.720273 ACTTATTTTGGGACGGAGGAGTAT 59.280 41.667 0.00 0.00 0.00 2.12
2301 2359 4.081309 CACTTATTTTGGGACGGAGGAGTA 60.081 45.833 0.00 0.00 0.00 2.59
2302 2360 2.910977 ACTTATTTTGGGACGGAGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
2303 2361 3.270877 CACTTATTTTGGGACGGAGGAG 58.729 50.000 0.00 0.00 0.00 3.69
2304 2362 2.640826 ACACTTATTTTGGGACGGAGGA 59.359 45.455 0.00 0.00 0.00 3.71
2305 2363 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
2306 2364 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
2307 2365 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
2308 2366 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
2309 2367 4.378459 GCTTGAGACACTTATTTTGGGACG 60.378 45.833 0.00 0.00 0.00 4.79
2310 2368 4.762251 AGCTTGAGACACTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
2311 2369 4.985538 AGCTTGAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
2312 2370 5.712152 AAGCTTGAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
2313 2371 7.440523 ACTAAGCTTGAGACACTTATTTTGG 57.559 36.000 9.86 0.00 0.00 3.28
2314 2372 9.209175 AGTACTAAGCTTGAGACACTTATTTTG 57.791 33.333 9.86 0.00 0.00 2.44
2315 2373 9.425577 GAGTACTAAGCTTGAGACACTTATTTT 57.574 33.333 9.86 0.00 0.00 1.82
2316 2374 8.035984 GGAGTACTAAGCTTGAGACACTTATTT 58.964 37.037 9.86 0.00 0.00 1.40
2317 2375 7.397761 AGGAGTACTAAGCTTGAGACACTTATT 59.602 37.037 9.86 0.00 0.00 1.40
2318 2376 6.893005 AGGAGTACTAAGCTTGAGACACTTAT 59.107 38.462 9.86 3.28 0.00 1.73
2319 2377 6.246919 AGGAGTACTAAGCTTGAGACACTTA 58.753 40.000 9.86 0.00 0.00 2.24
2320 2378 5.081032 AGGAGTACTAAGCTTGAGACACTT 58.919 41.667 9.86 0.00 0.00 3.16
2321 2379 4.668636 AGGAGTACTAAGCTTGAGACACT 58.331 43.478 9.86 10.68 0.00 3.55
2322 2380 5.394224 AAGGAGTACTAAGCTTGAGACAC 57.606 43.478 9.86 2.54 0.00 3.67
2323 2381 4.463186 GGAAGGAGTACTAAGCTTGAGACA 59.537 45.833 9.86 0.00 0.00 3.41
2324 2382 4.439016 CGGAAGGAGTACTAAGCTTGAGAC 60.439 50.000 9.86 3.78 0.00 3.36
2325 2383 3.695060 CGGAAGGAGTACTAAGCTTGAGA 59.305 47.826 9.86 0.00 0.00 3.27
2326 2384 3.444388 ACGGAAGGAGTACTAAGCTTGAG 59.556 47.826 9.86 5.36 0.00 3.02
2327 2385 3.428532 ACGGAAGGAGTACTAAGCTTGA 58.571 45.455 9.86 0.00 0.00 3.02
2328 2386 3.870633 ACGGAAGGAGTACTAAGCTTG 57.129 47.619 9.86 1.57 0.00 4.01
2329 2387 3.119566 CGAACGGAAGGAGTACTAAGCTT 60.120 47.826 3.48 3.48 0.00 3.74
2330 2388 2.422832 CGAACGGAAGGAGTACTAAGCT 59.577 50.000 0.00 0.00 0.00 3.74
2331 2389 2.479219 CCGAACGGAAGGAGTACTAAGC 60.479 54.545 7.53 0.00 37.50 3.09
2332 2390 3.012518 TCCGAACGGAAGGAGTACTAAG 58.987 50.000 13.65 0.00 42.05 2.18
2333 2391 3.071874 TCCGAACGGAAGGAGTACTAA 57.928 47.619 13.65 0.00 42.05 2.24
2334 2392 2.787473 TCCGAACGGAAGGAGTACTA 57.213 50.000 13.65 0.00 42.05 1.82
2335 2393 3.658398 TCCGAACGGAAGGAGTACT 57.342 52.632 13.65 0.00 42.05 2.73
2344 2402 3.861113 CGAGACAAATAATTCCGAACGGA 59.139 43.478 12.04 12.04 43.52 4.69
2345 2403 3.861113 TCGAGACAAATAATTCCGAACGG 59.139 43.478 6.94 6.94 0.00 4.44
2346 2404 5.444586 TTCGAGACAAATAATTCCGAACG 57.555 39.130 0.00 0.00 30.98 3.95
2347 2405 7.218204 CCATTTTCGAGACAAATAATTCCGAAC 59.782 37.037 0.00 0.00 34.86 3.95
2348 2406 7.119992 TCCATTTTCGAGACAAATAATTCCGAA 59.880 33.333 0.00 0.00 33.57 4.30
2349 2407 6.596106 TCCATTTTCGAGACAAATAATTCCGA 59.404 34.615 0.00 0.00 0.00 4.55
2350 2408 6.781138 TCCATTTTCGAGACAAATAATTCCG 58.219 36.000 0.00 0.00 0.00 4.30
2351 2409 8.190784 ACATCCATTTTCGAGACAAATAATTCC 58.809 33.333 0.00 0.00 0.00 3.01
2355 2413 9.613428 AGATACATCCATTTTCGAGACAAATAA 57.387 29.630 0.00 0.00 0.00 1.40
2357 2415 9.265901 CTAGATACATCCATTTTCGAGACAAAT 57.734 33.333 0.00 0.00 0.00 2.32
2358 2416 8.474831 TCTAGATACATCCATTTTCGAGACAAA 58.525 33.333 0.00 0.00 0.00 2.83
2359 2417 8.007405 TCTAGATACATCCATTTTCGAGACAA 57.993 34.615 0.00 0.00 0.00 3.18
2360 2418 7.582667 TCTAGATACATCCATTTTCGAGACA 57.417 36.000 0.00 0.00 0.00 3.41
2361 2419 8.138712 AGTTCTAGATACATCCATTTTCGAGAC 58.861 37.037 0.00 0.00 0.00 3.36
2362 2420 8.239038 AGTTCTAGATACATCCATTTTCGAGA 57.761 34.615 0.00 0.00 0.00 4.04
2363 2421 9.967346 TTAGTTCTAGATACATCCATTTTCGAG 57.033 33.333 0.00 0.00 0.00 4.04
2391 2449 9.363763 CGCAGAAATGAATGTATCTAGACATAT 57.636 33.333 0.00 0.00 39.16 1.78
2392 2450 8.576442 TCGCAGAAATGAATGTATCTAGACATA 58.424 33.333 0.00 0.00 39.16 2.29
2393 2451 7.383572 GTCGCAGAAATGAATGTATCTAGACAT 59.616 37.037 0.00 0.00 39.31 3.06
2394 2452 6.697455 GTCGCAGAAATGAATGTATCTAGACA 59.303 38.462 0.00 0.00 39.69 3.41
2395 2453 6.697455 TGTCGCAGAAATGAATGTATCTAGAC 59.303 38.462 0.00 0.00 39.69 2.59
2396 2454 6.805713 TGTCGCAGAAATGAATGTATCTAGA 58.194 36.000 0.00 0.00 39.69 2.43
2397 2455 7.223582 ACTTGTCGCAGAAATGAATGTATCTAG 59.776 37.037 0.00 0.00 39.69 2.43
2398 2456 7.041721 ACTTGTCGCAGAAATGAATGTATCTA 58.958 34.615 0.00 0.00 39.69 1.98
2399 2457 5.877012 ACTTGTCGCAGAAATGAATGTATCT 59.123 36.000 0.00 0.00 39.69 1.98
2400 2458 6.111768 ACTTGTCGCAGAAATGAATGTATC 57.888 37.500 0.00 0.00 39.69 2.24
2401 2459 7.280876 ACATACTTGTCGCAGAAATGAATGTAT 59.719 33.333 0.00 0.00 39.69 2.29
2402 2460 6.593770 ACATACTTGTCGCAGAAATGAATGTA 59.406 34.615 0.00 0.00 39.69 2.29
2403 2461 5.412594 ACATACTTGTCGCAGAAATGAATGT 59.587 36.000 0.00 0.00 39.69 2.71
2404 2462 5.872635 ACATACTTGTCGCAGAAATGAATG 58.127 37.500 0.00 0.00 39.69 2.67
2405 2463 6.111768 GACATACTTGTCGCAGAAATGAAT 57.888 37.500 0.00 0.00 42.66 2.57
2406 2464 5.530519 GACATACTTGTCGCAGAAATGAA 57.469 39.130 0.00 0.00 42.66 2.57
2420 2478 9.698309 CGAAAATGGATGTATCTAGACATACTT 57.302 33.333 7.97 1.20 40.77 2.24
2421 2479 9.078990 TCGAAAATGGATGTATCTAGACATACT 57.921 33.333 7.97 0.00 40.77 2.12
2422 2480 9.347934 CTCGAAAATGGATGTATCTAGACATAC 57.652 37.037 0.00 0.00 40.18 2.39
2423 2481 9.297037 TCTCGAAAATGGATGTATCTAGACATA 57.703 33.333 0.00 0.00 40.18 2.29
2424 2482 8.085296 GTCTCGAAAATGGATGTATCTAGACAT 58.915 37.037 0.00 0.00 42.82 3.06
2425 2483 7.068226 TGTCTCGAAAATGGATGTATCTAGACA 59.932 37.037 0.00 0.00 36.91 3.41
2426 2484 7.426410 TGTCTCGAAAATGGATGTATCTAGAC 58.574 38.462 0.00 0.00 0.00 2.59
2427 2485 7.582667 TGTCTCGAAAATGGATGTATCTAGA 57.417 36.000 0.00 0.00 0.00 2.43
2428 2486 7.923344 ACTTGTCTCGAAAATGGATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
2429 2487 7.782049 ACTTGTCTCGAAAATGGATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
2430 2488 6.644347 ACTTGTCTCGAAAATGGATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
2431 2489 6.910536 ACTTGTCTCGAAAATGGATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
2432 2490 8.964476 ATTACTTGTCTCGAAAATGGATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
2433 2491 8.786826 AATTACTTGTCTCGAAAATGGATGTA 57.213 30.769 0.00 0.00 0.00 2.29
2434 2492 7.148239 GGAATTACTTGTCTCGAAAATGGATGT 60.148 37.037 0.00 0.00 0.00 3.06
2435 2493 7.189512 GGAATTACTTGTCTCGAAAATGGATG 58.810 38.462 0.00 0.00 0.00 3.51
2436 2494 6.037172 CGGAATTACTTGTCTCGAAAATGGAT 59.963 38.462 0.00 0.00 0.00 3.41
2437 2495 5.350365 CGGAATTACTTGTCTCGAAAATGGA 59.650 40.000 0.00 0.00 0.00 3.41
2438 2496 5.350365 TCGGAATTACTTGTCTCGAAAATGG 59.650 40.000 0.00 0.00 0.00 3.16
2439 2497 6.090898 ACTCGGAATTACTTGTCTCGAAAATG 59.909 38.462 0.00 0.00 0.00 2.32
2440 2498 6.090898 CACTCGGAATTACTTGTCTCGAAAAT 59.909 38.462 0.00 0.00 0.00 1.82
2441 2499 5.404366 CACTCGGAATTACTTGTCTCGAAAA 59.596 40.000 0.00 0.00 0.00 2.29
2442 2500 4.921515 CACTCGGAATTACTTGTCTCGAAA 59.078 41.667 0.00 0.00 0.00 3.46
2443 2501 4.482386 CACTCGGAATTACTTGTCTCGAA 58.518 43.478 0.00 0.00 0.00 3.71
2444 2502 3.119602 CCACTCGGAATTACTTGTCTCGA 60.120 47.826 0.00 0.00 0.00 4.04
2445 2503 3.119602 TCCACTCGGAATTACTTGTCTCG 60.120 47.826 0.00 0.00 38.83 4.04
2446 2504 4.425520 CTCCACTCGGAATTACTTGTCTC 58.574 47.826 0.00 0.00 42.21 3.36
2447 2505 3.195825 CCTCCACTCGGAATTACTTGTCT 59.804 47.826 0.00 0.00 42.21 3.41
2448 2506 3.522553 CCTCCACTCGGAATTACTTGTC 58.477 50.000 0.00 0.00 42.21 3.18
2449 2507 2.236395 CCCTCCACTCGGAATTACTTGT 59.764 50.000 0.00 0.00 42.21 3.16
2450 2508 2.500098 TCCCTCCACTCGGAATTACTTG 59.500 50.000 0.00 0.00 42.21 3.16
2451 2509 2.766828 CTCCCTCCACTCGGAATTACTT 59.233 50.000 0.00 0.00 42.21 2.24
2452 2510 2.292323 ACTCCCTCCACTCGGAATTACT 60.292 50.000 0.00 0.00 42.21 2.24
2453 2511 2.108970 ACTCCCTCCACTCGGAATTAC 58.891 52.381 0.00 0.00 42.21 1.89
2454 2512 2.544844 ACTCCCTCCACTCGGAATTA 57.455 50.000 0.00 0.00 42.21 1.40
2455 2513 2.544844 TACTCCCTCCACTCGGAATT 57.455 50.000 0.00 0.00 42.21 2.17
2456 2514 2.777459 ATACTCCCTCCACTCGGAAT 57.223 50.000 0.00 0.00 42.21 3.01
2457 2515 3.675348 TTATACTCCCTCCACTCGGAA 57.325 47.619 0.00 0.00 42.21 4.30
2458 2516 3.897657 ATTATACTCCCTCCACTCGGA 57.102 47.619 0.00 0.00 39.79 4.55
2459 2517 4.957684 AAATTATACTCCCTCCACTCGG 57.042 45.455 0.00 0.00 0.00 4.63
2460 2518 5.671493 ACAAAATTATACTCCCTCCACTCG 58.329 41.667 0.00 0.00 0.00 4.18
2496 2554 9.349713 TGTCCAAAATAAGTATCTCAACTTTGT 57.650 29.630 0.00 0.00 40.20 2.83
2497 2555 9.831737 CTGTCCAAAATAAGTATCTCAACTTTG 57.168 33.333 0.00 0.00 40.20 2.77
2498 2556 9.793259 TCTGTCCAAAATAAGTATCTCAACTTT 57.207 29.630 0.00 0.00 40.20 2.66
2499 2557 9.442047 CTCTGTCCAAAATAAGTATCTCAACTT 57.558 33.333 0.00 0.00 42.31 2.66
2500 2558 8.043710 CCTCTGTCCAAAATAAGTATCTCAACT 58.956 37.037 0.00 0.00 0.00 3.16
2501 2559 7.281100 CCCTCTGTCCAAAATAAGTATCTCAAC 59.719 40.741 0.00 0.00 0.00 3.18
2502 2560 7.182026 TCCCTCTGTCCAAAATAAGTATCTCAA 59.818 37.037 0.00 0.00 0.00 3.02
2503 2561 6.672218 TCCCTCTGTCCAAAATAAGTATCTCA 59.328 38.462 0.00 0.00 0.00 3.27
2504 2562 7.125792 TCCCTCTGTCCAAAATAAGTATCTC 57.874 40.000 0.00 0.00 0.00 2.75
2505 2563 6.674419 ACTCCCTCTGTCCAAAATAAGTATCT 59.326 38.462 0.00 0.00 0.00 1.98
2506 2564 6.890293 ACTCCCTCTGTCCAAAATAAGTATC 58.110 40.000 0.00 0.00 0.00 2.24
2507 2565 6.893020 ACTCCCTCTGTCCAAAATAAGTAT 57.107 37.500 0.00 0.00 0.00 2.12
2508 2566 6.958192 ACTACTCCCTCTGTCCAAAATAAGTA 59.042 38.462 0.00 0.00 0.00 2.24
2509 2567 5.785940 ACTACTCCCTCTGTCCAAAATAAGT 59.214 40.000 0.00 0.00 0.00 2.24
2510 2568 6.109359 CACTACTCCCTCTGTCCAAAATAAG 58.891 44.000 0.00 0.00 0.00 1.73
2511 2569 5.045869 CCACTACTCCCTCTGTCCAAAATAA 60.046 44.000 0.00 0.00 0.00 1.40
2512 2570 4.469945 CCACTACTCCCTCTGTCCAAAATA 59.530 45.833 0.00 0.00 0.00 1.40
2513 2571 3.264450 CCACTACTCCCTCTGTCCAAAAT 59.736 47.826 0.00 0.00 0.00 1.82
2514 2572 2.637872 CCACTACTCCCTCTGTCCAAAA 59.362 50.000 0.00 0.00 0.00 2.44
2515 2573 2.257207 CCACTACTCCCTCTGTCCAAA 58.743 52.381 0.00 0.00 0.00 3.28
2516 2574 1.552486 CCCACTACTCCCTCTGTCCAA 60.552 57.143 0.00 0.00 0.00 3.53
2517 2575 0.041238 CCCACTACTCCCTCTGTCCA 59.959 60.000 0.00 0.00 0.00 4.02
2518 2576 0.688087 CCCCACTACTCCCTCTGTCC 60.688 65.000 0.00 0.00 0.00 4.02
2519 2577 0.335361 TCCCCACTACTCCCTCTGTC 59.665 60.000 0.00 0.00 0.00 3.51
2520 2578 0.790993 TTCCCCACTACTCCCTCTGT 59.209 55.000 0.00 0.00 0.00 3.41
2521 2579 1.196012 GTTCCCCACTACTCCCTCTG 58.804 60.000 0.00 0.00 0.00 3.35
2522 2580 0.324460 CGTTCCCCACTACTCCCTCT 60.324 60.000 0.00 0.00 0.00 3.69
2523 2581 1.328430 CCGTTCCCCACTACTCCCTC 61.328 65.000 0.00 0.00 0.00 4.30
2524 2582 1.305887 CCGTTCCCCACTACTCCCT 60.306 63.158 0.00 0.00 0.00 4.20
2525 2583 1.305549 TCCGTTCCCCACTACTCCC 60.306 63.158 0.00 0.00 0.00 4.30
2526 2584 1.895966 GTCCGTTCCCCACTACTCC 59.104 63.158 0.00 0.00 0.00 3.85
2527 2585 1.509923 CGTCCGTTCCCCACTACTC 59.490 63.158 0.00 0.00 0.00 2.59
2528 2586 1.980772 CCGTCCGTTCCCCACTACT 60.981 63.158 0.00 0.00 0.00 2.57
2529 2587 1.941999 CTCCGTCCGTTCCCCACTAC 61.942 65.000 0.00 0.00 0.00 2.73
2530 2588 1.679977 CTCCGTCCGTTCCCCACTA 60.680 63.158 0.00 0.00 0.00 2.74
2531 2589 2.430704 TACTCCGTCCGTTCCCCACT 62.431 60.000 0.00 0.00 0.00 4.00
2532 2590 1.978617 TACTCCGTCCGTTCCCCAC 60.979 63.158 0.00 0.00 0.00 4.61
2533 2591 1.978617 GTACTCCGTCCGTTCCCCA 60.979 63.158 0.00 0.00 0.00 4.96
2534 2592 2.888111 GTACTCCGTCCGTTCCCC 59.112 66.667 0.00 0.00 0.00 4.81
2535 2593 2.486966 CGTACTCCGTCCGTTCCC 59.513 66.667 0.00 0.00 0.00 3.97
2544 2602 6.753279 TGTTTCATTTCCTAATACGTACTCCG 59.247 38.462 0.00 0.00 44.03 4.63
2545 2603 7.763071 ACTGTTTCATTTCCTAATACGTACTCC 59.237 37.037 0.00 0.00 0.00 3.85
2546 2604 8.592998 CACTGTTTCATTTCCTAATACGTACTC 58.407 37.037 0.00 0.00 0.00 2.59
2547 2605 8.308931 TCACTGTTTCATTTCCTAATACGTACT 58.691 33.333 0.00 0.00 0.00 2.73
2548 2606 8.470040 TCACTGTTTCATTTCCTAATACGTAC 57.530 34.615 0.00 0.00 0.00 3.67
2549 2607 9.146984 CTTCACTGTTTCATTTCCTAATACGTA 57.853 33.333 0.00 0.00 0.00 3.57
2550 2608 7.119262 CCTTCACTGTTTCATTTCCTAATACGT 59.881 37.037 0.00 0.00 0.00 3.57
2551 2609 7.333423 TCCTTCACTGTTTCATTTCCTAATACG 59.667 37.037 0.00 0.00 0.00 3.06
2552 2610 8.561738 TCCTTCACTGTTTCATTTCCTAATAC 57.438 34.615 0.00 0.00 0.00 1.89
2553 2611 9.581289 TTTCCTTCACTGTTTCATTTCCTAATA 57.419 29.630 0.00 0.00 0.00 0.98
2554 2612 8.360390 GTTTCCTTCACTGTTTCATTTCCTAAT 58.640 33.333 0.00 0.00 0.00 1.73
2555 2613 7.559897 AGTTTCCTTCACTGTTTCATTTCCTAA 59.440 33.333 0.00 0.00 0.00 2.69
2556 2614 7.013274 CAGTTTCCTTCACTGTTTCATTTCCTA 59.987 37.037 0.00 0.00 37.47 2.94
2557 2615 5.893824 AGTTTCCTTCACTGTTTCATTTCCT 59.106 36.000 0.00 0.00 0.00 3.36
2558 2616 5.979517 CAGTTTCCTTCACTGTTTCATTTCC 59.020 40.000 0.00 0.00 37.47 3.13
2559 2617 6.795399 TCAGTTTCCTTCACTGTTTCATTTC 58.205 36.000 0.24 0.00 42.12 2.17
2560 2618 6.773976 TCAGTTTCCTTCACTGTTTCATTT 57.226 33.333 0.24 0.00 42.12 2.32
2561 2619 6.603201 TCTTCAGTTTCCTTCACTGTTTCATT 59.397 34.615 0.24 0.00 42.12 2.57
2562 2620 6.122277 TCTTCAGTTTCCTTCACTGTTTCAT 58.878 36.000 0.24 0.00 42.12 2.57
2563 2621 5.496556 TCTTCAGTTTCCTTCACTGTTTCA 58.503 37.500 0.24 0.00 42.12 2.69
2564 2622 6.436843 TTCTTCAGTTTCCTTCACTGTTTC 57.563 37.500 0.24 0.00 42.12 2.78
2565 2623 6.208599 TGTTTCTTCAGTTTCCTTCACTGTTT 59.791 34.615 0.24 0.00 42.12 2.83
2566 2624 5.710099 TGTTTCTTCAGTTTCCTTCACTGTT 59.290 36.000 0.24 0.00 42.12 3.16
2567 2625 5.253330 TGTTTCTTCAGTTTCCTTCACTGT 58.747 37.500 0.24 0.00 42.12 3.55
2568 2626 5.731686 GCTGTTTCTTCAGTTTCCTTCACTG 60.732 44.000 0.00 0.00 42.74 3.66
2569 2627 4.336713 GCTGTTTCTTCAGTTTCCTTCACT 59.663 41.667 0.00 0.00 37.70 3.41
2570 2628 4.096382 TGCTGTTTCTTCAGTTTCCTTCAC 59.904 41.667 0.00 0.00 37.70 3.18
2571 2629 4.269183 TGCTGTTTCTTCAGTTTCCTTCA 58.731 39.130 0.00 0.00 37.70 3.02
2572 2630 4.900635 TGCTGTTTCTTCAGTTTCCTTC 57.099 40.909 0.00 0.00 37.70 3.46
2573 2631 4.462483 TGTTGCTGTTTCTTCAGTTTCCTT 59.538 37.500 0.00 0.00 37.70 3.36
2574 2632 4.016444 TGTTGCTGTTTCTTCAGTTTCCT 58.984 39.130 0.00 0.00 37.70 3.36
2575 2633 4.370364 TGTTGCTGTTTCTTCAGTTTCC 57.630 40.909 0.00 0.00 37.70 3.13
2576 2634 6.268566 AGAATGTTGCTGTTTCTTCAGTTTC 58.731 36.000 0.00 0.00 37.70 2.78
2577 2635 6.212888 AGAATGTTGCTGTTTCTTCAGTTT 57.787 33.333 0.00 0.00 37.70 2.66
2578 2636 5.841957 AGAATGTTGCTGTTTCTTCAGTT 57.158 34.783 0.00 0.00 37.70 3.16
2579 2637 5.841957 AAGAATGTTGCTGTTTCTTCAGT 57.158 34.783 0.00 0.00 35.36 3.41
2583 2641 5.841957 ACTGAAGAATGTTGCTGTTTCTT 57.158 34.783 0.00 0.00 41.20 2.52
2584 2642 5.841957 AACTGAAGAATGTTGCTGTTTCT 57.158 34.783 0.00 0.00 0.00 2.52
2585 2643 7.166473 CACTTAACTGAAGAATGTTGCTGTTTC 59.834 37.037 0.00 0.00 38.65 2.78
2586 2644 6.974622 CACTTAACTGAAGAATGTTGCTGTTT 59.025 34.615 0.00 0.00 38.65 2.83
2587 2645 6.318648 TCACTTAACTGAAGAATGTTGCTGTT 59.681 34.615 0.00 0.00 38.65 3.16
2588 2646 5.822519 TCACTTAACTGAAGAATGTTGCTGT 59.177 36.000 0.00 0.00 38.65 4.40
2589 2647 6.304356 TCACTTAACTGAAGAATGTTGCTG 57.696 37.500 0.00 0.00 38.65 4.41
2590 2648 6.128445 CGATCACTTAACTGAAGAATGTTGCT 60.128 38.462 0.00 0.00 38.65 3.91
2591 2649 6.017933 CGATCACTTAACTGAAGAATGTTGC 58.982 40.000 0.00 0.00 38.65 4.17
2592 2650 7.351414 TCGATCACTTAACTGAAGAATGTTG 57.649 36.000 0.00 0.00 38.65 3.33
2593 2651 7.962964 TTCGATCACTTAACTGAAGAATGTT 57.037 32.000 0.00 0.00 38.65 2.71
2594 2652 7.441157 TGTTTCGATCACTTAACTGAAGAATGT 59.559 33.333 0.00 0.00 38.65 2.71
2595 2653 7.742089 GTGTTTCGATCACTTAACTGAAGAATG 59.258 37.037 12.11 0.00 38.65 2.67
2596 2654 7.441157 TGTGTTTCGATCACTTAACTGAAGAAT 59.559 33.333 17.69 0.00 38.65 2.40
2597 2655 6.759356 TGTGTTTCGATCACTTAACTGAAGAA 59.241 34.615 17.69 3.85 38.65 2.52
2598 2656 6.277605 TGTGTTTCGATCACTTAACTGAAGA 58.722 36.000 17.69 0.00 38.65 2.87
2599 2657 6.346919 CCTGTGTTTCGATCACTTAACTGAAG 60.347 42.308 17.69 7.80 41.37 3.02
2600 2658 5.465390 CCTGTGTTTCGATCACTTAACTGAA 59.535 40.000 17.69 0.54 36.83 3.02
2601 2659 4.988540 CCTGTGTTTCGATCACTTAACTGA 59.011 41.667 17.69 0.00 36.83 3.41
2602 2660 4.988540 TCCTGTGTTTCGATCACTTAACTG 59.011 41.667 17.69 4.46 36.83 3.16
2603 2661 4.989168 GTCCTGTGTTTCGATCACTTAACT 59.011 41.667 17.69 0.00 36.83 2.24
2604 2662 4.989168 AGTCCTGTGTTTCGATCACTTAAC 59.011 41.667 17.69 13.29 36.83 2.01
2605 2663 5.209818 AGTCCTGTGTTTCGATCACTTAA 57.790 39.130 17.69 5.10 36.83 1.85
2606 2664 4.866508 AGTCCTGTGTTTCGATCACTTA 57.133 40.909 17.69 3.24 36.83 2.24
2607 2665 3.753294 AGTCCTGTGTTTCGATCACTT 57.247 42.857 17.69 2.13 36.83 3.16
2608 2666 4.866508 TTAGTCCTGTGTTTCGATCACT 57.133 40.909 17.69 4.77 36.83 3.41
2609 2667 5.869888 AGATTTAGTCCTGTGTTTCGATCAC 59.130 40.000 12.38 12.38 36.48 3.06
2610 2668 5.869344 CAGATTTAGTCCTGTGTTTCGATCA 59.131 40.000 0.00 0.00 0.00 2.92
2611 2669 6.100004 TCAGATTTAGTCCTGTGTTTCGATC 58.900 40.000 0.00 0.00 0.00 3.69
2612 2670 6.037786 TCAGATTTAGTCCTGTGTTTCGAT 57.962 37.500 0.00 0.00 0.00 3.59
2613 2671 5.462530 TCAGATTTAGTCCTGTGTTTCGA 57.537 39.130 0.00 0.00 0.00 3.71
2614 2672 6.183360 GGATTCAGATTTAGTCCTGTGTTTCG 60.183 42.308 0.00 0.00 0.00 3.46
2615 2673 6.881602 AGGATTCAGATTTAGTCCTGTGTTTC 59.118 38.462 0.00 0.00 37.88 2.78
2616 2674 6.784031 AGGATTCAGATTTAGTCCTGTGTTT 58.216 36.000 0.00 0.00 37.88 2.83
2617 2675 6.380079 AGGATTCAGATTTAGTCCTGTGTT 57.620 37.500 0.00 0.00 37.88 3.32
2618 2676 6.380079 AAGGATTCAGATTTAGTCCTGTGT 57.620 37.500 0.00 0.00 39.18 3.72
2619 2677 6.917217 GAAGGATTCAGATTTAGTCCTGTG 57.083 41.667 0.00 0.00 46.62 3.66
2643 2701 1.674651 GGTTGGAGGCCTCGGAAAC 60.675 63.158 26.36 25.78 0.00 2.78
2644 2702 1.838073 GAGGTTGGAGGCCTCGGAAA 61.838 60.000 26.36 17.13 42.46 3.13
2645 2703 2.203938 AGGTTGGAGGCCTCGGAA 60.204 61.111 26.36 18.11 0.00 4.30
2646 2704 2.683933 GAGGTTGGAGGCCTCGGA 60.684 66.667 26.36 14.40 42.46 4.55
2650 2708 2.234296 CCTTGGAGGTTGGAGGCCT 61.234 63.158 3.86 3.86 39.42 5.19
2651 2709 2.356667 CCTTGGAGGTTGGAGGCC 59.643 66.667 0.00 0.00 0.00 5.19



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.