Multiple sequence alignment - TraesCS2D01G167800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G167800 chr2D 100.000 2733 0 0 1 2733 111335495 111338227 0.000000e+00 5048
1 TraesCS2D01G167800 chr2B 95.475 1746 57 15 53 1787 161418600 161420334 0.000000e+00 2767
2 TraesCS2D01G167800 chr2B 87.522 561 37 23 2197 2733 161433069 161433620 3.870000e-173 617
3 TraesCS2D01G167800 chr2B 91.525 295 15 5 1779 2063 161432771 161433065 5.480000e-107 398
4 TraesCS2D01G167800 chr2A 93.692 1823 75 20 53 1862 111424923 111426718 0.000000e+00 2693
5 TraesCS2D01G167800 chr2A 92.495 946 52 10 1801 2733 111426719 111427658 0.000000e+00 1336
6 TraesCS2D01G167800 chr1A 79.888 179 34 2 1278 1455 551981307 551981130 2.210000e-26 130
7 TraesCS2D01G167800 chr1D 82.836 134 21 2 1323 1455 460865535 460865403 4.780000e-23 119
8 TraesCS2D01G167800 chr1B 82.836 134 21 2 1323 1455 633136386 633136254 4.780000e-23 119


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G167800 chr2D 111335495 111338227 2732 False 5048.0 5048 100.0000 1 2733 1 chr2D.!!$F1 2732
1 TraesCS2D01G167800 chr2B 161418600 161420334 1734 False 2767.0 2767 95.4750 53 1787 1 chr2B.!!$F1 1734
2 TraesCS2D01G167800 chr2B 161432771 161433620 849 False 507.5 617 89.5235 1779 2733 2 chr2B.!!$F2 954
3 TraesCS2D01G167800 chr2A 111424923 111427658 2735 False 2014.5 2693 93.0935 53 2733 2 chr2A.!!$F1 2680

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
26 27 0.317799 GCCATTCATGCACACAACCA 59.682 50.0 0.0 0.0 0.0 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1811 1833 0.61326 CCCAGCTACAGTAACCAGCA 59.387 55.0 0.0 0.0 37.78 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.879912 GCATAGGCCATTCATGCAC 57.120 52.632 20.35 0.00 43.59 4.57
20 21 1.034356 GCATAGGCCATTCATGCACA 58.966 50.000 20.35 0.00 43.59 4.57
21 22 1.269413 GCATAGGCCATTCATGCACAC 60.269 52.381 20.35 0.00 43.59 3.82
22 23 2.025898 CATAGGCCATTCATGCACACA 58.974 47.619 5.01 0.00 0.00 3.72
23 24 2.212812 TAGGCCATTCATGCACACAA 57.787 45.000 5.01 0.00 0.00 3.33
24 25 0.604578 AGGCCATTCATGCACACAAC 59.395 50.000 5.01 0.00 0.00 3.32
25 26 0.390209 GGCCATTCATGCACACAACC 60.390 55.000 0.00 0.00 0.00 3.77
26 27 0.317799 GCCATTCATGCACACAACCA 59.682 50.000 0.00 0.00 0.00 3.67
27 28 1.670674 GCCATTCATGCACACAACCAG 60.671 52.381 0.00 0.00 0.00 4.00
28 29 1.670674 CCATTCATGCACACAACCAGC 60.671 52.381 0.00 0.00 0.00 4.85
29 30 1.000052 CATTCATGCACACAACCAGCA 60.000 47.619 0.00 0.00 43.14 4.41
31 32 2.197283 TCATGCACACAACCAGCATA 57.803 45.000 0.00 0.00 46.39 3.14
32 33 1.811965 TCATGCACACAACCAGCATAC 59.188 47.619 0.00 0.00 46.39 2.39
33 34 1.135315 CATGCACACAACCAGCATACC 60.135 52.381 0.00 0.00 46.39 2.73
34 35 1.233950 TGCACACAACCAGCATACCG 61.234 55.000 0.00 0.00 32.55 4.02
35 36 0.953471 GCACACAACCAGCATACCGA 60.953 55.000 0.00 0.00 0.00 4.69
36 37 1.518325 CACACAACCAGCATACCGAA 58.482 50.000 0.00 0.00 0.00 4.30
37 38 1.876799 CACACAACCAGCATACCGAAA 59.123 47.619 0.00 0.00 0.00 3.46
38 39 1.877443 ACACAACCAGCATACCGAAAC 59.123 47.619 0.00 0.00 0.00 2.78
39 40 1.199097 CACAACCAGCATACCGAAACC 59.801 52.381 0.00 0.00 0.00 3.27
40 41 1.202830 ACAACCAGCATACCGAAACCA 60.203 47.619 0.00 0.00 0.00 3.67
41 42 1.199097 CAACCAGCATACCGAAACCAC 59.801 52.381 0.00 0.00 0.00 4.16
42 43 0.398696 ACCAGCATACCGAAACCACA 59.601 50.000 0.00 0.00 0.00 4.17
43 44 1.086696 CCAGCATACCGAAACCACAG 58.913 55.000 0.00 0.00 0.00 3.66
44 45 1.338674 CCAGCATACCGAAACCACAGA 60.339 52.381 0.00 0.00 0.00 3.41
45 46 2.422597 CAGCATACCGAAACCACAGAA 58.577 47.619 0.00 0.00 0.00 3.02
46 47 3.009723 CAGCATACCGAAACCACAGAAT 58.990 45.455 0.00 0.00 0.00 2.40
47 48 3.440173 CAGCATACCGAAACCACAGAATT 59.560 43.478 0.00 0.00 0.00 2.17
48 49 4.079253 AGCATACCGAAACCACAGAATTT 58.921 39.130 0.00 0.00 0.00 1.82
49 50 5.123186 CAGCATACCGAAACCACAGAATTTA 59.877 40.000 0.00 0.00 0.00 1.40
50 51 5.885912 AGCATACCGAAACCACAGAATTTAT 59.114 36.000 0.00 0.00 0.00 1.40
51 52 6.377146 AGCATACCGAAACCACAGAATTTATT 59.623 34.615 0.00 0.00 0.00 1.40
57 58 9.621629 ACCGAAACCACAGAATTTATTATATCA 57.378 29.630 0.00 0.00 0.00 2.15
85 90 6.115446 CCACAGAATTTACTCCAGAGCATAA 58.885 40.000 0.00 0.00 0.00 1.90
133 138 3.848272 AAAACGACAATGGCCACTATG 57.152 42.857 8.16 10.85 0.00 2.23
225 231 3.623060 CCTAACCATCTGAACAATGTCCG 59.377 47.826 0.00 0.00 0.00 4.79
618 625 2.705410 CATGGGAGGGGGAGGAGA 59.295 66.667 0.00 0.00 0.00 3.71
619 626 1.461075 CATGGGAGGGGGAGGAGAG 60.461 68.421 0.00 0.00 0.00 3.20
621 628 3.036959 GGGAGGGGGAGGAGAGGA 61.037 72.222 0.00 0.00 0.00 3.71
622 629 2.612251 GGAGGGGGAGGAGAGGAG 59.388 72.222 0.00 0.00 0.00 3.69
624 631 3.767044 GAGGGGGAGGAGAGGAGGC 62.767 73.684 0.00 0.00 0.00 4.70
640 655 2.279517 GCGGAGTGCGGAATCGAT 60.280 61.111 6.08 0.00 39.00 3.59
673 688 1.227176 GACCCGTGATTCTACCCGC 60.227 63.158 0.00 0.00 0.00 6.13
810 831 3.244700 GGTCATATGGGCAGTTGCTATCT 60.245 47.826 2.13 0.00 41.70 1.98
811 832 4.392940 GTCATATGGGCAGTTGCTATCTT 58.607 43.478 2.13 0.00 41.70 2.40
929 951 2.615493 CCTGTGAGTGGGCGAACTATTT 60.615 50.000 0.00 0.00 0.00 1.40
1043 1065 1.929836 CTCTTCTCCTCCAAATTCGCG 59.070 52.381 0.00 0.00 0.00 5.87
1238 1260 2.908015 GGATTAGGTCCTGGCGCA 59.092 61.111 10.83 0.00 44.16 6.09
1457 1479 4.406763 AAGGAGGAGGCCGAGGCT 62.407 66.667 14.33 0.02 42.48 4.58
1553 1575 4.096190 TCGATTCCTACCGTTCCTAGAT 57.904 45.455 0.00 0.00 0.00 1.98
1561 1583 3.627395 ACCGTTCCTAGATGATGCAAA 57.373 42.857 0.00 0.00 0.00 3.68
1692 1714 1.869767 GCCTCGAAGCATAATCACTGG 59.130 52.381 0.00 0.00 0.00 4.00
1736 1758 1.586042 GGTGTTGCTGTGTTGTGCG 60.586 57.895 0.00 0.00 0.00 5.34
1747 1769 2.756207 TGTGTTGTGCGCTATCCTACTA 59.244 45.455 9.73 0.00 0.00 1.82
1793 1815 5.928839 AGCTACATTGACTAGTGTGAAAGTG 59.071 40.000 0.00 0.00 0.00 3.16
1797 1819 5.690409 ACATTGACTAGTGTGAAAGTGTACG 59.310 40.000 0.00 0.00 0.00 3.67
1805 1827 3.064207 TGTGAAAGTGTACGAAGATGCC 58.936 45.455 0.00 0.00 0.00 4.40
1806 1828 3.064207 GTGAAAGTGTACGAAGATGCCA 58.936 45.455 0.00 0.00 0.00 4.92
1807 1829 3.684788 GTGAAAGTGTACGAAGATGCCAT 59.315 43.478 0.00 0.00 0.00 4.40
1808 1830 4.154195 GTGAAAGTGTACGAAGATGCCATT 59.846 41.667 0.00 0.00 0.00 3.16
1809 1831 4.391830 TGAAAGTGTACGAAGATGCCATTC 59.608 41.667 0.00 0.00 0.00 2.67
1810 1832 3.895232 AGTGTACGAAGATGCCATTCT 57.105 42.857 0.00 0.00 0.00 2.40
1811 1833 4.207891 AGTGTACGAAGATGCCATTCTT 57.792 40.909 0.00 0.00 38.65 2.52
1812 1834 3.935203 AGTGTACGAAGATGCCATTCTTG 59.065 43.478 0.00 0.00 36.10 3.02
1813 1835 2.677836 TGTACGAAGATGCCATTCTTGC 59.322 45.455 0.00 0.00 36.10 4.01
1814 1836 2.119801 ACGAAGATGCCATTCTTGCT 57.880 45.000 0.00 0.00 36.10 3.91
1815 1837 1.741706 ACGAAGATGCCATTCTTGCTG 59.258 47.619 0.00 0.00 36.10 4.41
1816 1838 1.065102 CGAAGATGCCATTCTTGCTGG 59.935 52.381 0.00 0.00 36.10 4.85
1883 1969 7.125811 TCTGGTGGTTAGAATATGCTAGTTTCT 59.874 37.037 0.00 0.00 34.29 2.52
1912 1998 3.056678 TGTTGATGTGGAATGATGCCAAC 60.057 43.478 0.00 0.00 37.12 3.77
1940 2026 5.768662 AGATGGCATCCATTCTATGTCAAAG 59.231 40.000 23.33 0.00 45.26 2.77
1941 2027 4.858850 TGGCATCCATTCTATGTCAAAGT 58.141 39.130 0.00 0.00 36.08 2.66
1942 2028 4.641541 TGGCATCCATTCTATGTCAAAGTG 59.358 41.667 0.00 0.00 36.08 3.16
2053 2140 6.969366 TGTTTGTGAAGGTGAAGTTCATATG 58.031 36.000 9.18 0.00 36.35 1.78
2075 2162 4.322349 TGCTTTGCATGGTTATTTACCCAC 60.322 41.667 0.00 0.00 38.93 4.61
2096 2183 4.963953 CACGAAACTGAGATGTGTTGTTTC 59.036 41.667 0.00 0.00 41.46 2.78
2109 2196 4.882427 TGTGTTGTTTCTTTAACGGATGGA 59.118 37.500 0.00 0.00 39.72 3.41
2120 2207 2.128771 ACGGATGGACTTTGATTGGG 57.871 50.000 0.00 0.00 0.00 4.12
2146 2233 3.195661 GAGGTATGGGTAGCGAAGTTTG 58.804 50.000 0.00 0.00 33.59 2.93
2195 2282 1.496001 TGATGCCATGGCCAGTATCTT 59.504 47.619 33.44 8.13 41.09 2.40
2206 2293 7.201902 CCATGGCCAGTATCTTAAATTTAGCAA 60.202 37.037 13.05 0.00 0.00 3.91
2207 2294 7.095695 TGGCCAGTATCTTAAATTTAGCAAC 57.904 36.000 0.00 0.00 0.00 4.17
2249 2336 4.003648 CAGTCCAAAGACCCATGACTTAC 58.996 47.826 0.00 0.00 44.72 2.34
2263 2355 2.101750 TGACTTACGGTTCTGCTGTGAA 59.898 45.455 0.00 0.00 37.27 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.034356 TGTGCATGAATGGCCTATGC 58.966 50.000 20.47 20.47 45.53 3.14
2 3 2.025898 TGTGTGCATGAATGGCCTATG 58.974 47.619 3.32 4.92 0.00 2.23
3 4 2.428171 GTTGTGTGCATGAATGGCCTAT 59.572 45.455 3.32 0.00 0.00 2.57
4 5 1.818060 GTTGTGTGCATGAATGGCCTA 59.182 47.619 3.32 0.00 0.00 3.93
5 6 0.604578 GTTGTGTGCATGAATGGCCT 59.395 50.000 3.32 0.00 0.00 5.19
6 7 0.390209 GGTTGTGTGCATGAATGGCC 60.390 55.000 0.00 0.00 0.00 5.36
7 8 0.317799 TGGTTGTGTGCATGAATGGC 59.682 50.000 0.00 0.00 0.00 4.40
8 9 1.670674 GCTGGTTGTGTGCATGAATGG 60.671 52.381 0.00 0.00 0.00 3.16
9 10 1.000052 TGCTGGTTGTGTGCATGAATG 60.000 47.619 0.00 0.00 0.00 2.67
10 11 1.330234 TGCTGGTTGTGTGCATGAAT 58.670 45.000 0.00 0.00 0.00 2.57
11 12 1.330234 ATGCTGGTTGTGTGCATGAA 58.670 45.000 0.00 0.00 44.48 2.57
12 13 1.811965 GTATGCTGGTTGTGTGCATGA 59.188 47.619 9.55 0.00 45.52 3.07
13 14 1.135315 GGTATGCTGGTTGTGTGCATG 60.135 52.381 9.55 0.00 45.52 4.06
15 16 1.233950 CGGTATGCTGGTTGTGTGCA 61.234 55.000 0.00 0.00 41.13 4.57
16 17 0.953471 TCGGTATGCTGGTTGTGTGC 60.953 55.000 0.00 0.00 0.00 4.57
17 18 1.518325 TTCGGTATGCTGGTTGTGTG 58.482 50.000 0.00 0.00 0.00 3.82
18 19 1.877443 GTTTCGGTATGCTGGTTGTGT 59.123 47.619 0.00 0.00 0.00 3.72
19 20 1.199097 GGTTTCGGTATGCTGGTTGTG 59.801 52.381 0.00 0.00 0.00 3.33
20 21 1.202830 TGGTTTCGGTATGCTGGTTGT 60.203 47.619 0.00 0.00 0.00 3.32
21 22 1.199097 GTGGTTTCGGTATGCTGGTTG 59.801 52.381 0.00 0.00 0.00 3.77
22 23 1.202830 TGTGGTTTCGGTATGCTGGTT 60.203 47.619 0.00 0.00 0.00 3.67
23 24 0.398696 TGTGGTTTCGGTATGCTGGT 59.601 50.000 0.00 0.00 0.00 4.00
24 25 1.086696 CTGTGGTTTCGGTATGCTGG 58.913 55.000 0.00 0.00 0.00 4.85
25 26 2.093306 TCTGTGGTTTCGGTATGCTG 57.907 50.000 0.00 0.00 0.00 4.41
26 27 2.851263 TTCTGTGGTTTCGGTATGCT 57.149 45.000 0.00 0.00 0.00 3.79
27 28 4.434713 AAATTCTGTGGTTTCGGTATGC 57.565 40.909 0.00 0.00 0.00 3.14
31 32 9.621629 TGATATAATAAATTCTGTGGTTTCGGT 57.378 29.630 0.00 0.00 0.00 4.69
51 52 9.967451 TGGAGTAAATTCTGTGGTTTTGATATA 57.033 29.630 0.00 0.00 0.00 0.86
55 56 6.361433 TCTGGAGTAAATTCTGTGGTTTTGA 58.639 36.000 0.00 0.00 0.00 2.69
57 58 5.241728 GCTCTGGAGTAAATTCTGTGGTTTT 59.758 40.000 0.00 0.00 0.00 2.43
133 138 4.020662 AGGTCTGTTCTGTGAGAGGAAATC 60.021 45.833 0.00 0.00 0.00 2.17
297 303 4.143333 ACCGTTGGGGATCTCGCG 62.143 66.667 0.00 0.00 39.97 5.87
619 626 4.162690 ATTCCGCACTCCGCCTCC 62.163 66.667 0.00 0.00 37.30 4.30
621 628 4.514577 CGATTCCGCACTCCGCCT 62.515 66.667 0.00 0.00 37.30 5.52
622 629 3.792053 ATCGATTCCGCACTCCGCC 62.792 63.158 0.00 0.00 37.30 6.13
624 631 1.004927 GAAAATCGATTCCGCACTCCG 60.005 52.381 11.83 0.00 35.37 4.63
640 655 0.746563 GGGTCCCGATCATGCGAAAA 60.747 55.000 0.00 0.00 0.00 2.29
740 755 1.197721 CAACACCACGCCATTCTCTTC 59.802 52.381 0.00 0.00 0.00 2.87
741 756 1.238439 CAACACCACGCCATTCTCTT 58.762 50.000 0.00 0.00 0.00 2.85
781 796 1.151450 GCCCATATGACCCCACCAG 59.849 63.158 3.65 0.00 0.00 4.00
810 831 3.907260 CTGGCCGCTGCTCTTCCAA 62.907 63.158 0.00 0.00 37.74 3.53
811 832 4.399395 CTGGCCGCTGCTCTTCCA 62.399 66.667 0.00 0.00 37.74 3.53
929 951 6.049955 AGATAGATCAGGAAAACGGAAACA 57.950 37.500 0.00 0.00 0.00 2.83
1433 1455 4.811364 GCCTCCTCCTTGGGCAGC 62.811 72.222 0.00 0.00 44.69 5.25
1457 1479 3.939837 CTTGAGCTTGGCGGCGAGA 62.940 63.158 29.20 6.19 37.29 4.04
1553 1575 5.963176 ACACACACATAAGATTTGCATCA 57.037 34.783 0.00 0.00 0.00 3.07
1692 1714 4.521130 TGCGTGATCCAGGAAGATATAC 57.479 45.455 0.00 0.00 0.00 1.47
1736 1758 8.179509 TGTTTAATCCAGACTAGTAGGATAGC 57.820 38.462 22.89 14.20 41.15 2.97
1747 1769 8.814038 AGCTATTGAAATGTTTAATCCAGACT 57.186 30.769 0.00 0.00 0.00 3.24
1793 1815 2.939103 AGCAAGAATGGCATCTTCGTAC 59.061 45.455 0.00 0.00 37.68 3.67
1797 1819 2.097825 ACCAGCAAGAATGGCATCTTC 58.902 47.619 0.00 0.00 37.68 2.87
1805 1827 4.093998 CAGCTACAGTAACCAGCAAGAATG 59.906 45.833 0.00 0.00 37.78 2.67
1806 1828 4.256920 CAGCTACAGTAACCAGCAAGAAT 58.743 43.478 0.00 0.00 37.78 2.40
1807 1829 3.557054 CCAGCTACAGTAACCAGCAAGAA 60.557 47.826 0.00 0.00 37.78 2.52
1808 1830 2.028112 CCAGCTACAGTAACCAGCAAGA 60.028 50.000 0.00 0.00 37.78 3.02
1809 1831 2.350522 CCAGCTACAGTAACCAGCAAG 58.649 52.381 0.00 0.00 37.78 4.01
1810 1832 1.003118 CCCAGCTACAGTAACCAGCAA 59.997 52.381 0.00 0.00 37.78 3.91
1811 1833 0.613260 CCCAGCTACAGTAACCAGCA 59.387 55.000 0.00 0.00 37.78 4.41
1812 1834 0.902531 TCCCAGCTACAGTAACCAGC 59.097 55.000 0.00 0.00 35.49 4.85
1813 1835 2.743183 GCATCCCAGCTACAGTAACCAG 60.743 54.545 0.00 0.00 0.00 4.00
1814 1836 1.209504 GCATCCCAGCTACAGTAACCA 59.790 52.381 0.00 0.00 0.00 3.67
1815 1837 1.475213 GGCATCCCAGCTACAGTAACC 60.475 57.143 0.00 0.00 34.17 2.85
1816 1838 1.209504 TGGCATCCCAGCTACAGTAAC 59.790 52.381 0.00 0.00 35.79 2.50
1883 1969 6.812656 GCATCATTCCACATCAACAAATAACA 59.187 34.615 0.00 0.00 0.00 2.41
1897 1983 3.018856 TCTCATGTTGGCATCATTCCAC 58.981 45.455 8.30 0.00 32.45 4.02
1912 1998 5.254115 ACATAGAATGGATGCCATCTCATG 58.746 41.667 4.41 6.12 44.40 3.07
1940 2026 5.457799 GTGCTCATGATAATGTTTCATGCAC 59.542 40.000 11.06 11.06 46.49 4.57
1941 2027 5.125739 TGTGCTCATGATAATGTTTCATGCA 59.874 36.000 8.44 0.00 46.49 3.96
1942 2028 5.584442 TGTGCTCATGATAATGTTTCATGC 58.416 37.500 8.44 0.00 46.49 4.06
2063 2150 6.370718 ACATCTCAGTTTCGTGGGTAAATAAC 59.629 38.462 0.00 0.00 0.00 1.89
2070 2157 1.416401 ACACATCTCAGTTTCGTGGGT 59.584 47.619 0.00 0.00 31.83 4.51
2096 2183 5.393027 CCCAATCAAAGTCCATCCGTTAAAG 60.393 44.000 0.00 0.00 0.00 1.85
2109 2196 2.003072 ACCTCCATCCCCAATCAAAGT 58.997 47.619 0.00 0.00 0.00 2.66
2120 2207 0.608640 CGCTACCCATACCTCCATCC 59.391 60.000 0.00 0.00 0.00 3.51
2146 2233 3.166489 AGATTCAAGTGCGCTACTACC 57.834 47.619 9.73 0.00 39.18 3.18
2206 2293 8.438047 GGACTGATTATCCAAACTGTTCACAGT 61.438 40.741 6.78 6.78 46.02 3.55
2207 2294 6.128172 GGACTGATTATCCAAACTGTTCACAG 60.128 42.308 5.36 5.36 41.63 3.66
2221 2308 5.529060 GTCATGGGTCTTTGGACTGATTATC 59.471 44.000 0.00 0.00 41.82 1.75
2249 2336 4.481930 TTATTGTTTCACAGCAGAACCG 57.518 40.909 0.00 0.00 0.00 4.44
2542 2667 4.755123 CACAACCAAACTCTTACGAAGGAT 59.245 41.667 0.00 0.00 0.00 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.