Multiple sequence alignment - TraesCS2D01G126500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G126500 chr2D 100.000 2886 0 0 1 2886 73494352 73497237 0.000000e+00 5330.0
1 TraesCS2D01G126500 chr2D 83.871 155 24 1 554 707 122864265 122864111 2.320000e-31 147.0
2 TraesCS2D01G126500 chr2A 87.568 1826 133 41 2 1762 73151705 73153501 0.000000e+00 2028.0
3 TraesCS2D01G126500 chr2A 86.372 543 27 16 2113 2634 73153679 73154195 1.510000e-152 549.0
4 TraesCS2D01G126500 chr2A 84.507 71 10 1 2021 2090 73153551 73153621 5.160000e-08 69.4
5 TraesCS2D01G126500 chr2B 89.342 1201 59 28 583 1752 111447348 111448510 0.000000e+00 1445.0
6 TraesCS2D01G126500 chr2B 90.805 522 25 10 2113 2634 111448701 111449199 0.000000e+00 676.0
7 TraesCS2D01G126500 chr2B 85.492 579 64 14 1 574 111446716 111447279 1.150000e-163 586.0
8 TraesCS2D01G126500 chr2B 78.277 267 40 9 214 477 111446723 111446974 3.850000e-34 156.0
9 TraesCS2D01G126500 chr2B 92.958 71 5 0 2020 2090 111448560 111448630 1.410000e-18 104.0
10 TraesCS2D01G126500 chr1B 100.000 153 0 0 1868 2020 88005743 88005591 1.690000e-72 283.0
11 TraesCS2D01G126500 chr1B 97.727 44 1 0 1762 1805 22906969 22906926 3.080000e-10 76.8
12 TraesCS2D01G126500 chr1B 94.000 50 2 1 1756 1805 476928391 476928439 1.110000e-09 75.0
13 TraesCS2D01G126500 chr1B 89.831 59 4 2 1754 1810 638674648 638674706 1.110000e-09 75.0
14 TraesCS2D01G126500 chr6A 98.013 151 3 0 1871 2021 124711437 124711587 2.210000e-66 263.0
15 TraesCS2D01G126500 chr6A 98.013 151 3 0 1871 2021 534596844 534596994 2.210000e-66 263.0
16 TraesCS2D01G126500 chr5A 97.351 151 4 0 1870 2020 296198827 296198977 1.030000e-64 257.0
17 TraesCS2D01G126500 chr3A 97.351 151 4 0 1871 2021 694981947 694982097 1.030000e-64 257.0
18 TraesCS2D01G126500 chr1A 97.351 151 4 0 1871 2021 474777187 474777037 1.030000e-64 257.0
19 TraesCS2D01G126500 chr4A 98.611 144 2 0 1877 2020 478737604 478737461 3.690000e-64 255.0
20 TraesCS2D01G126500 chr6D 95.484 155 7 0 1870 2024 256727714 256727868 6.180000e-62 248.0
21 TraesCS2D01G126500 chr6D 92.308 52 2 2 1754 1805 460808334 460808285 3.990000e-09 73.1
22 TraesCS2D01G126500 chr5D 96.026 151 6 0 1871 2021 302355576 302355426 2.220000e-61 246.0
23 TraesCS2D01G126500 chr5D 86.207 145 19 1 566 709 27353994 27353850 3.850000e-34 156.0
24 TraesCS2D01G126500 chr1D 86.928 153 18 2 559 710 7349852 7349701 1.380000e-38 171.0
25 TraesCS2D01G126500 chr1D 83.893 149 23 1 559 706 325485964 325485816 1.080000e-29 141.0
26 TraesCS2D01G126500 chr1D 89.474 57 4 2 1743 1798 106321817 106321872 1.430000e-08 71.3
27 TraesCS2D01G126500 chr3D 87.075 147 14 2 559 700 199109925 199109779 8.280000e-36 161.0
28 TraesCS2D01G126500 chr5B 84.472 161 21 4 554 712 680316241 680316083 3.850000e-34 156.0
29 TraesCS2D01G126500 chr4B 84.314 153 22 2 556 707 483581988 483582139 6.440000e-32 148.0
30 TraesCS2D01G126500 chr7D 92.857 56 2 2 1761 1814 518057168 518057113 2.380000e-11 80.5
31 TraesCS2D01G126500 chr7D 86.957 69 7 2 1750 1817 91678360 91678427 3.080000e-10 76.8
32 TraesCS2D01G126500 chr7A 95.833 48 1 1 1758 1805 581370336 581370382 3.080000e-10 76.8
33 TraesCS2D01G126500 chr6B 92.308 52 2 2 1756 1805 42749501 42749450 3.990000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G126500 chr2D 73494352 73497237 2885 False 5330.000000 5330 100.0000 1 2886 1 chr2D.!!$F1 2885
1 TraesCS2D01G126500 chr2A 73151705 73154195 2490 False 882.133333 2028 86.1490 2 2634 3 chr2A.!!$F1 2632
2 TraesCS2D01G126500 chr2B 111446716 111449199 2483 False 593.400000 1445 87.3748 1 2634 5 chr2B.!!$F1 2633

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
965 1037 0.179051 TTTAGAAACCGTGGGTGCGT 60.179 50.0 0.0 0.0 35.34 5.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1908 2054 0.038251 TGTGAGATGGAGTGTCGTGC 60.038 55.0 0.0 0.0 0.0 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.685828 TGTATTATTTTCTTGCTTGTTTGTACC 57.314 29.630 0.00 0.00 0.00 3.34
30 31 8.816640 ATTATTTTCTTGCTTGTTTGTACCAG 57.183 30.769 0.00 0.00 0.00 4.00
40 41 5.762045 CTTGTTTGTACCAGGTGAAGATTG 58.238 41.667 0.76 0.00 0.00 2.67
208 213 6.569127 TGCTTACCCTCAACCATAGATTAA 57.431 37.500 0.00 0.00 0.00 1.40
209 214 6.591935 TGCTTACCCTCAACCATAGATTAAG 58.408 40.000 0.00 0.00 0.00 1.85
287 292 2.004733 ACCGCGGTTATTTGCTTACTC 58.995 47.619 28.70 0.00 0.00 2.59
288 293 1.329599 CCGCGGTTATTTGCTTACTCC 59.670 52.381 19.50 0.00 0.00 3.85
289 294 2.277084 CGCGGTTATTTGCTTACTCCT 58.723 47.619 0.00 0.00 0.00 3.69
290 295 3.450578 CGCGGTTATTTGCTTACTCCTA 58.549 45.455 0.00 0.00 0.00 2.94
293 298 4.874396 GCGGTTATTTGCTTACTCCTACTT 59.126 41.667 0.00 0.00 0.00 2.24
295 300 6.019237 GCGGTTATTTGCTTACTCCTACTTAC 60.019 42.308 0.00 0.00 0.00 2.34
443 450 9.538508 ACATTTTCTTCCATATTAGTACGTACC 57.461 33.333 21.80 4.66 0.00 3.34
541 551 6.552859 AAAATTTTGCGGGAAAATGGTAAG 57.447 33.333 18.90 0.00 42.41 2.34
542 552 5.476091 AATTTTGCGGGAAAATGGTAAGA 57.524 34.783 18.90 0.00 42.41 2.10
556 566 9.974980 GAAAATGGTAAGAAAAATTGACCACTA 57.025 29.630 0.00 0.00 42.75 2.74
574 584 4.069304 CACTATTCCCTCCGTTCACAAAA 58.931 43.478 0.00 0.00 0.00 2.44
575 585 4.700213 CACTATTCCCTCCGTTCACAAAAT 59.300 41.667 0.00 0.00 0.00 1.82
576 586 5.878116 CACTATTCCCTCCGTTCACAAAATA 59.122 40.000 0.00 0.00 0.00 1.40
578 588 5.897377 ATTCCCTCCGTTCACAAAATAAG 57.103 39.130 0.00 0.00 0.00 1.73
579 589 4.627284 TCCCTCCGTTCACAAAATAAGA 57.373 40.909 0.00 0.00 0.00 2.10
580 590 4.575885 TCCCTCCGTTCACAAAATAAGAG 58.424 43.478 0.00 0.00 0.00 2.85
581 591 3.689649 CCCTCCGTTCACAAAATAAGAGG 59.310 47.826 0.00 0.00 39.50 3.69
582 592 4.324267 CCTCCGTTCACAAAATAAGAGGT 58.676 43.478 0.00 0.00 35.88 3.85
583 593 4.760204 CCTCCGTTCACAAAATAAGAGGTT 59.240 41.667 0.00 0.00 35.88 3.50
584 594 5.106673 CCTCCGTTCACAAAATAAGAGGTTC 60.107 44.000 0.00 0.00 35.88 3.62
586 596 6.761312 TCCGTTCACAAAATAAGAGGTTCTA 58.239 36.000 0.00 0.00 0.00 2.10
587 597 7.218614 TCCGTTCACAAAATAAGAGGTTCTAA 58.781 34.615 0.00 0.00 0.00 2.10
589 599 7.172703 CCGTTCACAAAATAAGAGGTTCTAACT 59.827 37.037 0.00 0.00 0.00 2.24
652 722 4.274602 TGTTCACTCATTTTAGCCCGTA 57.725 40.909 0.00 0.00 0.00 4.02
653 723 3.998341 TGTTCACTCATTTTAGCCCGTAC 59.002 43.478 0.00 0.00 0.00 3.67
659 729 4.032703 TCATTTTAGCCCGTACGTAGAC 57.967 45.455 15.21 0.16 0.00 2.59
666 736 2.295349 AGCCCGTACGTAGACCATATTG 59.705 50.000 15.21 0.00 0.00 1.90
673 743 6.477688 CCGTACGTAGACCATATTGAAATGTT 59.522 38.462 15.21 0.00 0.00 2.71
700 770 8.335356 CAAAACGTCTTATATTCATGAACGGAT 58.665 33.333 11.07 7.37 0.00 4.18
943 1015 5.407502 CATCGACCGCACTCCATTTATATA 58.592 41.667 0.00 0.00 0.00 0.86
950 1022 8.603242 ACCGCACTCCATTTATATACTTTTAG 57.397 34.615 0.00 0.00 0.00 1.85
965 1037 0.179051 TTTAGAAACCGTGGGTGCGT 60.179 50.000 0.00 0.00 35.34 5.24
993 1065 0.613853 TACCAAGGGTCTCCGTCCAG 60.614 60.000 0.00 0.00 37.09 3.86
1026 1098 3.213402 AACCACCAAACCCACGCG 61.213 61.111 3.53 3.53 0.00 6.01
1077 1161 4.830765 GATGGCCACGGCGCACTA 62.831 66.667 8.16 0.00 43.06 2.74
1288 1390 4.509737 GCGGACGAGTACTGGGGC 62.510 72.222 9.86 6.04 0.00 5.80
1289 1391 2.754658 CGGACGAGTACTGGGGCT 60.755 66.667 9.86 0.00 0.00 5.19
1290 1392 1.452651 CGGACGAGTACTGGGGCTA 60.453 63.158 9.86 0.00 0.00 3.93
1378 1486 0.536460 GGTGGAAGAAGAAACGGGCA 60.536 55.000 0.00 0.00 0.00 5.36
1420 1528 2.342648 GGCGTGTTCCCTTCGTCT 59.657 61.111 0.00 0.00 0.00 4.18
1422 1530 1.289800 GGCGTGTTCCCTTCGTCTTC 61.290 60.000 0.00 0.00 0.00 2.87
1424 1532 0.318445 CGTGTTCCCTTCGTCTTCGT 60.318 55.000 0.00 0.00 38.33 3.85
1427 1535 0.731855 GTTCCCTTCGTCTTCGTCGG 60.732 60.000 0.00 0.00 38.33 4.79
1429 1537 2.567049 CCTTCGTCTTCGTCGGCT 59.433 61.111 0.00 0.00 38.33 5.52
1643 1769 4.915085 CGTATGCCTACCTTTGTTTGTTTG 59.085 41.667 0.00 0.00 0.00 2.93
1668 1803 9.692749 TGTTTGTTTGTTTTCTTTGTACATACA 57.307 25.926 0.00 0.00 33.82 2.29
1762 1903 8.614469 ATCGATCTTCTTCTTCTTTTCTTGTT 57.386 30.769 0.00 0.00 0.00 2.83
1763 1904 8.438676 TCGATCTTCTTCTTCTTTTCTTGTTT 57.561 30.769 0.00 0.00 0.00 2.83
1764 1905 8.893727 TCGATCTTCTTCTTCTTTTCTTGTTTT 58.106 29.630 0.00 0.00 0.00 2.43
1765 1906 9.508567 CGATCTTCTTCTTCTTTTCTTGTTTTT 57.491 29.630 0.00 0.00 0.00 1.94
1790 1931 9.699703 TTTTTAATAGTTTGGATTGCTTACCAC 57.300 29.630 0.00 0.00 35.81 4.16
1791 1932 8.410673 TTTAATAGTTTGGATTGCTTACCACA 57.589 30.769 0.00 0.00 35.81 4.17
1792 1933 8.588290 TTAATAGTTTGGATTGCTTACCACAT 57.412 30.769 0.00 0.00 35.81 3.21
1793 1934 4.789012 AGTTTGGATTGCTTACCACATG 57.211 40.909 0.00 0.00 35.81 3.21
1794 1935 4.151883 AGTTTGGATTGCTTACCACATGT 58.848 39.130 0.00 0.00 35.81 3.21
1795 1936 4.022068 AGTTTGGATTGCTTACCACATGTG 60.022 41.667 19.31 19.31 35.81 3.21
1796 1937 3.153369 TGGATTGCTTACCACATGTGT 57.847 42.857 23.79 14.29 0.00 3.72
1797 1938 3.081061 TGGATTGCTTACCACATGTGTC 58.919 45.455 23.79 11.95 0.00 3.67
1798 1939 3.081061 GGATTGCTTACCACATGTGTCA 58.919 45.455 23.79 8.71 0.00 3.58
1799 1940 3.127548 GGATTGCTTACCACATGTGTCAG 59.872 47.826 23.79 16.33 0.00 3.51
1800 1941 2.183478 TGCTTACCACATGTGTCAGG 57.817 50.000 23.79 11.52 0.00 3.86
1801 1942 1.419762 TGCTTACCACATGTGTCAGGT 59.580 47.619 23.79 16.69 38.14 4.00
1802 1943 1.806542 GCTTACCACATGTGTCAGGTG 59.193 52.381 23.79 10.21 44.32 4.00
1807 1948 2.260844 CACATGTGTCAGGTGGTTCT 57.739 50.000 18.03 0.00 41.58 3.01
1808 1949 2.575532 CACATGTGTCAGGTGGTTCTT 58.424 47.619 18.03 0.00 41.58 2.52
1809 1950 2.951642 CACATGTGTCAGGTGGTTCTTT 59.048 45.455 18.03 0.00 41.58 2.52
1810 1951 3.381272 CACATGTGTCAGGTGGTTCTTTT 59.619 43.478 18.03 0.00 41.58 2.27
1811 1952 3.632145 ACATGTGTCAGGTGGTTCTTTTC 59.368 43.478 0.00 0.00 0.00 2.29
1825 1966 4.112634 GTTCTTTTCTTGTTGTTGAGGGC 58.887 43.478 0.00 0.00 0.00 5.19
1857 2003 5.161358 TGAATCTCTGTGCAAACTAGTACG 58.839 41.667 0.00 0.00 0.00 3.67
1858 2004 4.785511 ATCTCTGTGCAAACTAGTACGT 57.214 40.909 0.00 0.00 0.00 3.57
1859 2005 5.892160 ATCTCTGTGCAAACTAGTACGTA 57.108 39.130 0.00 0.00 0.00 3.57
1860 2006 5.292671 TCTCTGTGCAAACTAGTACGTAG 57.707 43.478 0.00 0.00 34.52 3.51
1861 2007 4.758674 TCTCTGTGCAAACTAGTACGTAGT 59.241 41.667 8.23 8.23 44.51 2.73
1862 2008 5.934043 TCTCTGTGCAAACTAGTACGTAGTA 59.066 40.000 9.71 9.71 41.50 1.82
1879 2025 7.393841 ACGTAGTAGAAAATAGAGAACTGCT 57.606 36.000 0.00 0.00 41.94 4.24
1880 2026 8.503458 ACGTAGTAGAAAATAGAGAACTGCTA 57.497 34.615 0.00 0.00 41.94 3.49
1881 2027 9.122779 ACGTAGTAGAAAATAGAGAACTGCTAT 57.877 33.333 0.00 0.00 41.94 2.97
1897 2043 4.712122 TGCTATACAGACGACATTCACA 57.288 40.909 0.00 0.00 0.00 3.58
1898 2044 4.672409 TGCTATACAGACGACATTCACAG 58.328 43.478 0.00 0.00 0.00 3.66
1899 2045 4.398044 TGCTATACAGACGACATTCACAGA 59.602 41.667 0.00 0.00 0.00 3.41
1900 2046 4.735822 GCTATACAGACGACATTCACAGAC 59.264 45.833 0.00 0.00 0.00 3.51
1901 2047 2.051879 ACAGACGACATTCACAGACG 57.948 50.000 0.00 0.00 0.00 4.18
1902 2048 1.607148 ACAGACGACATTCACAGACGA 59.393 47.619 0.00 0.00 0.00 4.20
1903 2049 2.229062 ACAGACGACATTCACAGACGAT 59.771 45.455 0.00 0.00 0.00 3.73
1904 2050 3.245797 CAGACGACATTCACAGACGATT 58.754 45.455 0.00 0.00 0.00 3.34
1905 2051 3.675225 CAGACGACATTCACAGACGATTT 59.325 43.478 0.00 0.00 0.00 2.17
1906 2052 3.921021 AGACGACATTCACAGACGATTTC 59.079 43.478 0.00 0.00 0.00 2.17
1907 2053 3.649073 ACGACATTCACAGACGATTTCA 58.351 40.909 0.00 0.00 0.00 2.69
1908 2054 3.675225 ACGACATTCACAGACGATTTCAG 59.325 43.478 0.00 0.00 0.00 3.02
1909 2055 3.482598 CGACATTCACAGACGATTTCAGC 60.483 47.826 0.00 0.00 0.00 4.26
1910 2056 3.402110 ACATTCACAGACGATTTCAGCA 58.598 40.909 0.00 0.00 0.00 4.41
1911 2057 3.187227 ACATTCACAGACGATTTCAGCAC 59.813 43.478 0.00 0.00 0.00 4.40
1912 2058 1.418373 TCACAGACGATTTCAGCACG 58.582 50.000 0.00 0.00 0.00 5.34
1913 2059 1.000717 TCACAGACGATTTCAGCACGA 60.001 47.619 0.00 0.00 0.00 4.35
1914 2060 1.125021 CACAGACGATTTCAGCACGAC 59.875 52.381 0.00 0.00 0.00 4.34
1915 2061 1.269569 ACAGACGATTTCAGCACGACA 60.270 47.619 0.00 0.00 0.00 4.35
1916 2062 1.125021 CAGACGATTTCAGCACGACAC 59.875 52.381 0.00 0.00 0.00 3.67
1917 2063 1.000163 AGACGATTTCAGCACGACACT 60.000 47.619 0.00 0.00 0.00 3.55
1918 2064 1.387084 GACGATTTCAGCACGACACTC 59.613 52.381 0.00 0.00 0.00 3.51
1919 2065 0.716108 CGATTTCAGCACGACACTCC 59.284 55.000 0.00 0.00 0.00 3.85
1920 2066 1.795768 GATTTCAGCACGACACTCCA 58.204 50.000 0.00 0.00 0.00 3.86
1921 2067 2.350522 GATTTCAGCACGACACTCCAT 58.649 47.619 0.00 0.00 0.00 3.41
1922 2068 1.795768 TTTCAGCACGACACTCCATC 58.204 50.000 0.00 0.00 0.00 3.51
1923 2069 0.969149 TTCAGCACGACACTCCATCT 59.031 50.000 0.00 0.00 0.00 2.90
1924 2070 0.528017 TCAGCACGACACTCCATCTC 59.472 55.000 0.00 0.00 0.00 2.75
1925 2071 0.244721 CAGCACGACACTCCATCTCA 59.755 55.000 0.00 0.00 0.00 3.27
1926 2072 0.244994 AGCACGACACTCCATCTCAC 59.755 55.000 0.00 0.00 0.00 3.51
1927 2073 0.038251 GCACGACACTCCATCTCACA 60.038 55.000 0.00 0.00 0.00 3.58
1928 2074 1.702886 CACGACACTCCATCTCACAC 58.297 55.000 0.00 0.00 0.00 3.82
1929 2075 0.603569 ACGACACTCCATCTCACACC 59.396 55.000 0.00 0.00 0.00 4.16
1930 2076 0.603065 CGACACTCCATCTCACACCA 59.397 55.000 0.00 0.00 0.00 4.17
1931 2077 1.205655 CGACACTCCATCTCACACCAT 59.794 52.381 0.00 0.00 0.00 3.55
1932 2078 2.354103 CGACACTCCATCTCACACCATT 60.354 50.000 0.00 0.00 0.00 3.16
1933 2079 3.265791 GACACTCCATCTCACACCATTC 58.734 50.000 0.00 0.00 0.00 2.67
1934 2080 2.639347 ACACTCCATCTCACACCATTCA 59.361 45.455 0.00 0.00 0.00 2.57
1935 2081 3.265221 ACACTCCATCTCACACCATTCAT 59.735 43.478 0.00 0.00 0.00 2.57
1936 2082 4.263639 ACACTCCATCTCACACCATTCATT 60.264 41.667 0.00 0.00 0.00 2.57
1937 2083 4.334759 CACTCCATCTCACACCATTCATTC 59.665 45.833 0.00 0.00 0.00 2.67
1938 2084 4.019051 ACTCCATCTCACACCATTCATTCA 60.019 41.667 0.00 0.00 0.00 2.57
1939 2085 4.920999 TCCATCTCACACCATTCATTCAA 58.079 39.130 0.00 0.00 0.00 2.69
1940 2086 4.945543 TCCATCTCACACCATTCATTCAAG 59.054 41.667 0.00 0.00 0.00 3.02
1941 2087 4.945543 CCATCTCACACCATTCATTCAAGA 59.054 41.667 0.00 0.00 0.00 3.02
1942 2088 5.163683 CCATCTCACACCATTCATTCAAGAC 60.164 44.000 0.00 0.00 0.00 3.01
1943 2089 4.971939 TCTCACACCATTCATTCAAGACA 58.028 39.130 0.00 0.00 0.00 3.41
1944 2090 4.756642 TCTCACACCATTCATTCAAGACAC 59.243 41.667 0.00 0.00 0.00 3.67
1945 2091 3.820467 TCACACCATTCATTCAAGACACC 59.180 43.478 0.00 0.00 0.00 4.16
1946 2092 3.569277 CACACCATTCATTCAAGACACCA 59.431 43.478 0.00 0.00 0.00 4.17
1947 2093 4.037803 CACACCATTCATTCAAGACACCAA 59.962 41.667 0.00 0.00 0.00 3.67
1948 2094 4.834496 ACACCATTCATTCAAGACACCAAT 59.166 37.500 0.00 0.00 0.00 3.16
1949 2095 5.165676 CACCATTCATTCAAGACACCAATG 58.834 41.667 0.00 0.00 0.00 2.82
1950 2096 4.834496 ACCATTCATTCAAGACACCAATGT 59.166 37.500 0.00 0.00 43.71 2.71
1951 2097 6.009589 ACCATTCATTCAAGACACCAATGTA 58.990 36.000 0.00 0.00 39.95 2.29
1952 2098 6.071952 ACCATTCATTCAAGACACCAATGTAC 60.072 38.462 0.00 0.00 39.95 2.90
1953 2099 6.072008 CCATTCATTCAAGACACCAATGTACA 60.072 38.462 0.00 0.00 39.95 2.90
1954 2100 6.558771 TTCATTCAAGACACCAATGTACAG 57.441 37.500 0.33 0.00 39.95 2.74
1955 2101 5.863965 TCATTCAAGACACCAATGTACAGA 58.136 37.500 0.33 0.00 39.95 3.41
1956 2102 6.295249 TCATTCAAGACACCAATGTACAGAA 58.705 36.000 0.33 0.00 39.95 3.02
1957 2103 6.770303 TCATTCAAGACACCAATGTACAGAAA 59.230 34.615 0.33 0.00 39.95 2.52
1958 2104 6.618287 TTCAAGACACCAATGTACAGAAAG 57.382 37.500 0.33 0.00 39.95 2.62
1959 2105 5.680619 TCAAGACACCAATGTACAGAAAGT 58.319 37.500 0.33 0.00 39.95 2.66
1960 2106 6.119536 TCAAGACACCAATGTACAGAAAGTT 58.880 36.000 0.33 0.00 39.95 2.66
1961 2107 6.038161 TCAAGACACCAATGTACAGAAAGTTG 59.962 38.462 0.33 0.19 39.95 3.16
1962 2108 5.437060 AGACACCAATGTACAGAAAGTTGT 58.563 37.500 0.33 0.00 39.95 3.32
1963 2109 5.885912 AGACACCAATGTACAGAAAGTTGTT 59.114 36.000 0.33 0.00 39.95 2.83
1964 2110 5.890334 ACACCAATGTACAGAAAGTTGTTG 58.110 37.500 0.33 2.03 37.26 3.33
1965 2111 5.163561 ACACCAATGTACAGAAAGTTGTTGG 60.164 40.000 15.70 15.70 37.26 3.77
1966 2112 5.067153 CACCAATGTACAGAAAGTTGTTGGA 59.933 40.000 21.58 0.00 37.79 3.53
1967 2113 5.833131 ACCAATGTACAGAAAGTTGTTGGAT 59.167 36.000 21.58 8.09 37.79 3.41
1968 2114 6.323739 ACCAATGTACAGAAAGTTGTTGGATT 59.676 34.615 21.58 3.64 37.79 3.01
1969 2115 7.147742 ACCAATGTACAGAAAGTTGTTGGATTT 60.148 33.333 21.58 3.06 37.79 2.17
1970 2116 7.169645 CCAATGTACAGAAAGTTGTTGGATTTG 59.830 37.037 13.09 2.21 37.14 2.32
1971 2117 7.581213 ATGTACAGAAAGTTGTTGGATTTGA 57.419 32.000 0.33 0.00 32.56 2.69
1972 2118 7.397892 TGTACAGAAAGTTGTTGGATTTGAA 57.602 32.000 0.00 0.00 32.56 2.69
1973 2119 7.831753 TGTACAGAAAGTTGTTGGATTTGAAA 58.168 30.769 0.00 0.00 32.56 2.69
1974 2120 8.474025 TGTACAGAAAGTTGTTGGATTTGAAAT 58.526 29.630 0.00 0.00 32.56 2.17
1975 2121 8.968242 GTACAGAAAGTTGTTGGATTTGAAATC 58.032 33.333 9.36 9.36 32.56 2.17
1976 2122 6.697019 ACAGAAAGTTGTTGGATTTGAAATCG 59.303 34.615 11.39 0.00 0.00 3.34
1977 2123 6.144402 CAGAAAGTTGTTGGATTTGAAATCGG 59.856 38.462 11.39 0.00 0.00 4.18
1978 2124 3.913089 AGTTGTTGGATTTGAAATCGGC 58.087 40.909 11.39 5.24 0.00 5.54
1979 2125 3.573967 AGTTGTTGGATTTGAAATCGGCT 59.426 39.130 11.39 1.55 0.00 5.52
1980 2126 3.848272 TGTTGGATTTGAAATCGGCTC 57.152 42.857 11.39 0.00 0.00 4.70
1981 2127 3.153130 TGTTGGATTTGAAATCGGCTCA 58.847 40.909 11.39 1.72 0.00 4.26
1982 2128 3.191162 TGTTGGATTTGAAATCGGCTCAG 59.809 43.478 11.39 0.00 0.00 3.35
1983 2129 2.368439 TGGATTTGAAATCGGCTCAGG 58.632 47.619 11.39 0.00 0.00 3.86
1984 2130 2.026356 TGGATTTGAAATCGGCTCAGGA 60.026 45.455 11.39 0.00 0.00 3.86
1985 2131 3.217626 GGATTTGAAATCGGCTCAGGAT 58.782 45.455 11.39 0.00 0.00 3.24
1986 2132 3.251972 GGATTTGAAATCGGCTCAGGATC 59.748 47.826 11.39 0.00 0.00 3.36
1987 2133 1.939974 TTGAAATCGGCTCAGGATCG 58.060 50.000 0.00 0.00 0.00 3.69
1988 2134 0.824109 TGAAATCGGCTCAGGATCGT 59.176 50.000 0.00 0.00 0.00 3.73
1989 2135 1.212616 GAAATCGGCTCAGGATCGTG 58.787 55.000 9.16 9.16 0.00 4.35
1990 2136 0.811616 AAATCGGCTCAGGATCGTGC 60.812 55.000 10.58 0.00 0.00 5.34
1991 2137 1.960040 AATCGGCTCAGGATCGTGCA 61.960 55.000 10.58 0.00 0.00 4.57
1992 2138 1.960040 ATCGGCTCAGGATCGTGCAA 61.960 55.000 10.58 0.00 0.00 4.08
1993 2139 2.169789 CGGCTCAGGATCGTGCAAG 61.170 63.158 10.58 5.27 0.00 4.01
1994 2140 2.467826 GGCTCAGGATCGTGCAAGC 61.468 63.158 16.65 16.65 0.00 4.01
1995 2141 1.742880 GCTCAGGATCGTGCAAGCA 60.743 57.895 18.87 0.00 0.00 3.91
1996 2142 1.300971 GCTCAGGATCGTGCAAGCAA 61.301 55.000 18.87 0.00 0.00 3.91
1997 2143 1.159285 CTCAGGATCGTGCAAGCAAA 58.841 50.000 10.58 0.00 0.00 3.68
1998 2144 1.741706 CTCAGGATCGTGCAAGCAAAT 59.258 47.619 10.58 0.00 0.00 2.32
1999 2145 2.938451 CTCAGGATCGTGCAAGCAAATA 59.062 45.455 10.58 0.00 0.00 1.40
2000 2146 3.544684 TCAGGATCGTGCAAGCAAATAT 58.455 40.909 10.58 0.00 0.00 1.28
2001 2147 3.561310 TCAGGATCGTGCAAGCAAATATC 59.439 43.478 10.58 0.51 0.00 1.63
2002 2148 2.545526 AGGATCGTGCAAGCAAATATCG 59.454 45.455 0.00 0.00 0.00 2.92
2003 2149 2.287915 GGATCGTGCAAGCAAATATCGT 59.712 45.455 0.00 0.00 0.00 3.73
2004 2150 3.535860 GATCGTGCAAGCAAATATCGTC 58.464 45.455 0.00 0.00 0.00 4.20
2005 2151 2.616960 TCGTGCAAGCAAATATCGTCT 58.383 42.857 0.00 0.00 0.00 4.18
2006 2152 2.348362 TCGTGCAAGCAAATATCGTCTG 59.652 45.455 0.00 0.00 0.00 3.51
2007 2153 2.094258 CGTGCAAGCAAATATCGTCTGT 59.906 45.455 0.00 0.00 0.00 3.41
2008 2154 3.419915 GTGCAAGCAAATATCGTCTGTG 58.580 45.455 0.00 0.00 0.00 3.66
2009 2155 3.125146 GTGCAAGCAAATATCGTCTGTGA 59.875 43.478 0.00 0.00 0.00 3.58
2010 2156 3.750652 TGCAAGCAAATATCGTCTGTGAA 59.249 39.130 0.00 0.00 0.00 3.18
2011 2157 4.142838 TGCAAGCAAATATCGTCTGTGAAG 60.143 41.667 0.00 0.00 0.00 3.02
2012 2158 4.142816 GCAAGCAAATATCGTCTGTGAAGT 60.143 41.667 0.00 0.00 0.00 3.01
2013 2159 5.063438 GCAAGCAAATATCGTCTGTGAAGTA 59.937 40.000 0.00 0.00 0.00 2.24
2014 2160 6.700020 CAAGCAAATATCGTCTGTGAAGTAG 58.300 40.000 0.00 0.00 0.00 2.57
2015 2161 5.967088 AGCAAATATCGTCTGTGAAGTAGT 58.033 37.500 0.00 0.00 0.00 2.73
2016 2162 6.398918 AGCAAATATCGTCTGTGAAGTAGTT 58.601 36.000 0.00 0.00 0.00 2.24
2017 2163 6.874134 AGCAAATATCGTCTGTGAAGTAGTTT 59.126 34.615 0.00 0.00 0.00 2.66
2018 2164 7.063544 AGCAAATATCGTCTGTGAAGTAGTTTC 59.936 37.037 0.00 0.00 36.29 2.78
2040 2186 8.417176 GTTTCGTAGAAAATACAGTGCATTTTG 58.583 33.333 16.98 4.94 45.90 2.44
2051 2197 3.246699 CAGTGCATTTTGCTTCCTTGTTG 59.753 43.478 0.00 0.00 45.31 3.33
2183 2385 1.196808 CGTCAAACTCCCAATTGGACG 59.803 52.381 26.60 20.21 38.61 4.79
2191 2393 0.036164 CCCAATTGGACGGACAGACA 59.964 55.000 26.60 0.00 37.39 3.41
2192 2394 1.442769 CCAATTGGACGGACAGACAG 58.557 55.000 20.50 0.00 37.39 3.51
2193 2395 1.001974 CCAATTGGACGGACAGACAGA 59.998 52.381 20.50 0.00 37.39 3.41
2194 2396 2.069273 CAATTGGACGGACAGACAGAC 58.931 52.381 0.00 0.00 0.00 3.51
2237 2439 2.884207 GCATTCCGTCCGTCCGTC 60.884 66.667 0.00 0.00 0.00 4.79
2274 2476 1.152312 ATGTAGGTCCTAGCCCGGG 60.152 63.158 19.09 19.09 0.00 5.73
2275 2477 2.523657 GTAGGTCCTAGCCCGGGG 60.524 72.222 25.28 9.31 0.00 5.73
2276 2478 3.841353 TAGGTCCTAGCCCGGGGG 61.841 72.222 25.28 15.94 38.57 5.40
2360 2565 3.261951 CTCGGCCGCGTAACCATG 61.262 66.667 23.51 0.00 0.00 3.66
2361 2566 4.071875 TCGGCCGCGTAACCATGT 62.072 61.111 23.51 0.00 0.00 3.21
2362 2567 3.860125 CGGCCGCGTAACCATGTG 61.860 66.667 14.67 0.00 0.00 3.21
2379 2596 4.218200 CCATGTGTGTGTGTTTATGATGGT 59.782 41.667 0.00 0.00 0.00 3.55
2553 2771 5.099042 AGTACTGTGGTTGGCTTTATAGG 57.901 43.478 0.00 0.00 0.00 2.57
2594 2812 0.967380 CCCTGACCATGGTTTCCAGC 60.967 60.000 20.85 5.36 36.75 4.85
2623 2842 2.498167 CACCTAGGCATTGTCATAGGC 58.502 52.381 9.30 0.00 42.53 3.93
2634 2853 4.320456 CATAGGCGCCGGCATCCT 62.320 66.667 31.93 31.93 42.47 3.24
2635 2854 3.560251 ATAGGCGCCGGCATCCTT 61.560 61.111 33.67 21.53 42.47 3.36
2636 2855 3.537206 ATAGGCGCCGGCATCCTTC 62.537 63.158 33.67 14.32 42.47 3.46
2640 2859 2.817834 CGCCGGCATCCTTCGAAA 60.818 61.111 28.98 0.00 0.00 3.46
2641 2860 2.791927 GCCGGCATCCTTCGAAAC 59.208 61.111 24.80 0.00 0.00 2.78
2642 2861 3.089784 CCGGCATCCTTCGAAACG 58.910 61.111 0.00 0.00 0.00 3.60
2643 2862 1.447140 CCGGCATCCTTCGAAACGA 60.447 57.895 0.00 0.00 0.00 3.85
2644 2863 0.810031 CCGGCATCCTTCGAAACGAT 60.810 55.000 0.00 0.18 35.23 3.73
2645 2864 0.301687 CGGCATCCTTCGAAACGATG 59.698 55.000 22.04 22.04 35.23 3.84
2646 2865 1.651987 GGCATCCTTCGAAACGATGA 58.348 50.000 27.11 10.02 36.33 2.92
2647 2866 2.006888 GGCATCCTTCGAAACGATGAA 58.993 47.619 27.11 0.00 36.33 2.57
2648 2867 2.418628 GGCATCCTTCGAAACGATGAAA 59.581 45.455 27.11 0.70 36.33 2.69
2649 2868 3.119990 GGCATCCTTCGAAACGATGAAAA 60.120 43.478 27.11 0.00 36.33 2.29
2650 2869 3.846335 GCATCCTTCGAAACGATGAAAAC 59.154 43.478 27.11 13.15 36.33 2.43
2651 2870 3.781341 TCCTTCGAAACGATGAAAACG 57.219 42.857 0.00 0.00 38.45 3.60
2652 2871 3.382855 TCCTTCGAAACGATGAAAACGA 58.617 40.909 0.00 0.00 34.88 3.85
2653 2872 3.803231 TCCTTCGAAACGATGAAAACGAA 59.197 39.130 0.00 0.00 34.88 3.85
2655 2874 3.163642 TCGAAACGATGAAAACGAAGC 57.836 42.857 0.00 0.00 34.88 3.86
2656 2875 1.889955 CGAAACGATGAAAACGAAGCG 59.110 47.619 0.00 0.00 34.88 4.68
2657 2876 2.409244 CGAAACGATGAAAACGAAGCGA 60.409 45.455 0.00 0.00 34.88 4.93
2658 2877 3.537806 GAAACGATGAAAACGAAGCGAA 58.462 40.909 0.00 0.00 34.88 4.70
2659 2878 3.595709 AACGATGAAAACGAAGCGAAA 57.404 38.095 0.00 0.00 34.88 3.46
2660 2879 3.595709 ACGATGAAAACGAAGCGAAAA 57.404 38.095 0.00 0.00 34.88 2.29
2661 2880 3.285745 ACGATGAAAACGAAGCGAAAAC 58.714 40.909 0.00 0.00 34.88 2.43
2662 2881 3.001939 ACGATGAAAACGAAGCGAAAACT 59.998 39.130 0.00 0.00 34.88 2.66
2663 2882 3.966218 CGATGAAAACGAAGCGAAAACTT 59.034 39.130 0.00 0.00 31.90 2.66
2664 2883 4.436523 CGATGAAAACGAAGCGAAAACTTT 59.563 37.500 0.00 0.00 31.90 2.66
2665 2884 5.052633 CGATGAAAACGAAGCGAAAACTTTT 60.053 36.000 0.00 0.00 31.90 2.27
2666 2885 6.505732 CGATGAAAACGAAGCGAAAACTTTTT 60.506 34.615 0.00 0.00 31.90 1.94
2667 2886 5.838127 TGAAAACGAAGCGAAAACTTTTTG 58.162 33.333 0.00 0.00 0.00 2.44
2668 2887 5.402867 TGAAAACGAAGCGAAAACTTTTTGT 59.597 32.000 0.00 0.00 0.00 2.83
2669 2888 5.832568 AAACGAAGCGAAAACTTTTTGTT 57.167 30.435 0.00 0.00 41.29 2.83
2679 2898 4.937696 AAACTTTTTGTTTTTCCGGCAG 57.062 36.364 0.00 0.00 45.69 4.85
2680 2899 3.878160 ACTTTTTGTTTTTCCGGCAGA 57.122 38.095 0.00 0.00 0.00 4.26
2681 2900 4.195225 ACTTTTTGTTTTTCCGGCAGAA 57.805 36.364 0.00 0.00 0.00 3.02
2682 2901 4.570930 ACTTTTTGTTTTTCCGGCAGAAA 58.429 34.783 0.00 0.00 42.82 2.52
2692 2911 4.413495 TTCCGGCAGAAAAATAGAAACG 57.587 40.909 0.00 0.00 0.00 3.60
2693 2912 2.745281 TCCGGCAGAAAAATAGAAACGG 59.255 45.455 0.00 0.00 40.09 4.44
2694 2913 2.745281 CCGGCAGAAAAATAGAAACGGA 59.255 45.455 0.00 0.00 41.13 4.69
2695 2914 3.181510 CCGGCAGAAAAATAGAAACGGAG 60.182 47.826 0.00 0.00 41.13 4.63
2696 2915 3.682858 CGGCAGAAAAATAGAAACGGAGA 59.317 43.478 0.00 0.00 0.00 3.71
2697 2916 4.201724 CGGCAGAAAAATAGAAACGGAGAG 60.202 45.833 0.00 0.00 0.00 3.20
2698 2917 4.935808 GGCAGAAAAATAGAAACGGAGAGA 59.064 41.667 0.00 0.00 0.00 3.10
2699 2918 5.411669 GGCAGAAAAATAGAAACGGAGAGAA 59.588 40.000 0.00 0.00 0.00 2.87
2700 2919 6.072673 GGCAGAAAAATAGAAACGGAGAGAAA 60.073 38.462 0.00 0.00 0.00 2.52
2701 2920 7.360361 GCAGAAAAATAGAAACGGAGAGAAAA 58.640 34.615 0.00 0.00 0.00 2.29
2702 2921 7.535599 GCAGAAAAATAGAAACGGAGAGAAAAG 59.464 37.037 0.00 0.00 0.00 2.27
2703 2922 8.017946 CAGAAAAATAGAAACGGAGAGAAAAGG 58.982 37.037 0.00 0.00 0.00 3.11
2704 2923 6.819397 AAAATAGAAACGGAGAGAAAAGGG 57.181 37.500 0.00 0.00 0.00 3.95
2705 2924 2.861147 AGAAACGGAGAGAAAAGGGG 57.139 50.000 0.00 0.00 0.00 4.79
2706 2925 1.351350 AGAAACGGAGAGAAAAGGGGG 59.649 52.381 0.00 0.00 0.00 5.40
2707 2926 1.350019 GAAACGGAGAGAAAAGGGGGA 59.650 52.381 0.00 0.00 0.00 4.81
2708 2927 1.441695 AACGGAGAGAAAAGGGGGAA 58.558 50.000 0.00 0.00 0.00 3.97
2709 2928 1.441695 ACGGAGAGAAAAGGGGGAAA 58.558 50.000 0.00 0.00 0.00 3.13
2710 2929 1.993301 ACGGAGAGAAAAGGGGGAAAT 59.007 47.619 0.00 0.00 0.00 2.17
2711 2930 2.290960 ACGGAGAGAAAAGGGGGAAATG 60.291 50.000 0.00 0.00 0.00 2.32
2712 2931 2.026262 CGGAGAGAAAAGGGGGAAATGA 60.026 50.000 0.00 0.00 0.00 2.57
2713 2932 3.561313 CGGAGAGAAAAGGGGGAAATGAA 60.561 47.826 0.00 0.00 0.00 2.57
2714 2933 4.416516 GGAGAGAAAAGGGGGAAATGAAA 58.583 43.478 0.00 0.00 0.00 2.69
2715 2934 4.464244 GGAGAGAAAAGGGGGAAATGAAAG 59.536 45.833 0.00 0.00 0.00 2.62
2716 2935 3.834813 AGAGAAAAGGGGGAAATGAAAGC 59.165 43.478 0.00 0.00 0.00 3.51
2717 2936 2.562738 AGAAAAGGGGGAAATGAAAGCG 59.437 45.455 0.00 0.00 0.00 4.68
2718 2937 0.608130 AAAGGGGGAAATGAAAGCGC 59.392 50.000 0.00 0.00 0.00 5.92
2719 2938 0.541764 AAGGGGGAAATGAAAGCGCA 60.542 50.000 11.47 0.00 0.00 6.09
2720 2939 0.967380 AGGGGGAAATGAAAGCGCAG 60.967 55.000 11.47 0.00 0.00 5.18
2733 2952 3.043713 CGCAGCTCGCAAACCAGA 61.044 61.111 8.52 0.00 42.60 3.86
2734 2953 2.606961 CGCAGCTCGCAAACCAGAA 61.607 57.895 8.52 0.00 42.60 3.02
2735 2954 1.654220 GCAGCTCGCAAACCAGAAA 59.346 52.632 3.64 0.00 41.79 2.52
2736 2955 0.661483 GCAGCTCGCAAACCAGAAAC 60.661 55.000 3.64 0.00 41.79 2.78
2737 2956 0.384725 CAGCTCGCAAACCAGAAACG 60.385 55.000 0.00 0.00 0.00 3.60
2738 2957 1.082104 GCTCGCAAACCAGAAACGG 60.082 57.895 0.00 0.00 0.00 4.44
2739 2958 1.503818 GCTCGCAAACCAGAAACGGA 61.504 55.000 0.00 0.00 0.00 4.69
2740 2959 0.941542 CTCGCAAACCAGAAACGGAA 59.058 50.000 0.00 0.00 0.00 4.30
2741 2960 1.332375 CTCGCAAACCAGAAACGGAAA 59.668 47.619 0.00 0.00 0.00 3.13
2742 2961 1.950909 TCGCAAACCAGAAACGGAAAT 59.049 42.857 0.00 0.00 0.00 2.17
2743 2962 2.050691 CGCAAACCAGAAACGGAAATG 58.949 47.619 0.00 0.00 0.00 2.32
2744 2963 2.287308 CGCAAACCAGAAACGGAAATGA 60.287 45.455 0.00 0.00 0.00 2.57
2745 2964 3.712187 GCAAACCAGAAACGGAAATGAA 58.288 40.909 0.00 0.00 0.00 2.57
2746 2965 4.116238 GCAAACCAGAAACGGAAATGAAA 58.884 39.130 0.00 0.00 0.00 2.69
2747 2966 4.026062 GCAAACCAGAAACGGAAATGAAAC 60.026 41.667 0.00 0.00 0.00 2.78
2748 2967 4.993029 AACCAGAAACGGAAATGAAACA 57.007 36.364 0.00 0.00 0.00 2.83
2749 2968 4.301637 ACCAGAAACGGAAATGAAACAC 57.698 40.909 0.00 0.00 0.00 3.32
2750 2969 3.951680 ACCAGAAACGGAAATGAAACACT 59.048 39.130 0.00 0.00 0.00 3.55
2751 2970 4.036380 ACCAGAAACGGAAATGAAACACTC 59.964 41.667 0.00 0.00 0.00 3.51
2752 2971 4.036262 CCAGAAACGGAAATGAAACACTCA 59.964 41.667 0.00 0.00 38.81 3.41
2753 2972 5.207768 CAGAAACGGAAATGAAACACTCAG 58.792 41.667 0.00 0.00 37.52 3.35
2754 2973 3.626028 AACGGAAATGAAACACTCAGC 57.374 42.857 0.00 0.00 37.52 4.26
2755 2974 2.851195 ACGGAAATGAAACACTCAGCT 58.149 42.857 0.00 0.00 37.52 4.24
2756 2975 3.214328 ACGGAAATGAAACACTCAGCTT 58.786 40.909 0.00 0.00 37.52 3.74
2757 2976 3.251004 ACGGAAATGAAACACTCAGCTTC 59.749 43.478 0.00 0.00 37.52 3.86
2758 2977 3.250762 CGGAAATGAAACACTCAGCTTCA 59.749 43.478 0.00 0.00 37.52 3.02
2759 2978 4.083110 CGGAAATGAAACACTCAGCTTCAT 60.083 41.667 0.00 0.00 40.62 2.57
2760 2979 5.563475 CGGAAATGAAACACTCAGCTTCATT 60.563 40.000 2.40 2.40 46.59 2.57
2763 2982 4.836125 TGAAACACTCAGCTTCATTTCC 57.164 40.909 0.00 0.00 0.00 3.13
2764 2983 4.206375 TGAAACACTCAGCTTCATTTCCA 58.794 39.130 0.00 0.00 0.00 3.53
2765 2984 4.644234 TGAAACACTCAGCTTCATTTCCAA 59.356 37.500 0.00 0.00 0.00 3.53
2766 2985 4.843220 AACACTCAGCTTCATTTCCAAG 57.157 40.909 0.00 0.00 0.00 3.61
2767 2986 3.825328 ACACTCAGCTTCATTTCCAAGT 58.175 40.909 0.00 0.00 0.00 3.16
2768 2987 4.210331 ACACTCAGCTTCATTTCCAAGTT 58.790 39.130 0.00 0.00 0.00 2.66
2769 2988 4.646492 ACACTCAGCTTCATTTCCAAGTTT 59.354 37.500 0.00 0.00 0.00 2.66
2770 2989 5.127682 ACACTCAGCTTCATTTCCAAGTTTT 59.872 36.000 0.00 0.00 0.00 2.43
2771 2990 6.321181 ACACTCAGCTTCATTTCCAAGTTTTA 59.679 34.615 0.00 0.00 0.00 1.52
2772 2991 7.147915 ACACTCAGCTTCATTTCCAAGTTTTAA 60.148 33.333 0.00 0.00 0.00 1.52
2773 2992 7.869429 CACTCAGCTTCATTTCCAAGTTTTAAT 59.131 33.333 0.00 0.00 0.00 1.40
2774 2993 9.077885 ACTCAGCTTCATTTCCAAGTTTTAATA 57.922 29.630 0.00 0.00 0.00 0.98
2851 3070 1.846007 TGGTGTTGCCAAAGTTCAGT 58.154 45.000 0.00 0.00 45.94 3.41
2852 3071 1.476085 TGGTGTTGCCAAAGTTCAGTG 59.524 47.619 0.00 0.00 45.94 3.66
2853 3072 1.748493 GGTGTTGCCAAAGTTCAGTGA 59.252 47.619 0.00 0.00 37.17 3.41
2854 3073 2.362077 GGTGTTGCCAAAGTTCAGTGAT 59.638 45.455 0.00 0.00 37.17 3.06
2855 3074 3.568007 GGTGTTGCCAAAGTTCAGTGATA 59.432 43.478 0.00 0.00 37.17 2.15
2856 3075 4.537015 GTGTTGCCAAAGTTCAGTGATAC 58.463 43.478 0.00 0.00 0.00 2.24
2857 3076 4.275936 GTGTTGCCAAAGTTCAGTGATACT 59.724 41.667 0.00 0.00 0.00 2.12
2858 3077 4.887071 TGTTGCCAAAGTTCAGTGATACTT 59.113 37.500 12.24 12.24 36.20 2.24
2859 3078 5.359576 TGTTGCCAAAGTTCAGTGATACTTT 59.640 36.000 19.24 19.24 43.39 2.66
2866 3085 7.404671 AAAGTTCAGTGATACTTTGTTGGTT 57.595 32.000 21.98 6.58 41.62 3.67
2867 3086 7.404671 AAGTTCAGTGATACTTTGTTGGTTT 57.595 32.000 12.24 0.00 30.72 3.27
2868 3087 7.027778 AGTTCAGTGATACTTTGTTGGTTTC 57.972 36.000 0.00 0.00 0.00 2.78
2869 3088 6.601613 AGTTCAGTGATACTTTGTTGGTTTCA 59.398 34.615 0.00 0.00 0.00 2.69
2870 3089 7.285401 AGTTCAGTGATACTTTGTTGGTTTCAT 59.715 33.333 0.00 0.00 30.26 2.57
2871 3090 7.581213 TCAGTGATACTTTGTTGGTTTCATT 57.419 32.000 0.00 0.00 30.26 2.57
2872 3091 7.648142 TCAGTGATACTTTGTTGGTTTCATTC 58.352 34.615 0.00 0.00 30.26 2.67
2873 3092 7.502226 TCAGTGATACTTTGTTGGTTTCATTCT 59.498 33.333 0.00 0.00 30.26 2.40
2874 3093 7.592533 CAGTGATACTTTGTTGGTTTCATTCTG 59.407 37.037 0.00 0.00 30.26 3.02
2875 3094 7.285401 AGTGATACTTTGTTGGTTTCATTCTGT 59.715 33.333 0.00 0.00 30.26 3.41
2876 3095 7.379529 GTGATACTTTGTTGGTTTCATTCTGTG 59.620 37.037 0.00 0.00 30.26 3.66
2877 3096 5.659440 ACTTTGTTGGTTTCATTCTGTGT 57.341 34.783 0.00 0.00 0.00 3.72
2878 3097 6.036577 ACTTTGTTGGTTTCATTCTGTGTT 57.963 33.333 0.00 0.00 0.00 3.32
2879 3098 6.463360 ACTTTGTTGGTTTCATTCTGTGTTT 58.537 32.000 0.00 0.00 0.00 2.83
2880 3099 6.934083 ACTTTGTTGGTTTCATTCTGTGTTTT 59.066 30.769 0.00 0.00 0.00 2.43
2881 3100 7.443879 ACTTTGTTGGTTTCATTCTGTGTTTTT 59.556 29.630 0.00 0.00 0.00 1.94
2882 3101 6.959671 TGTTGGTTTCATTCTGTGTTTTTC 57.040 33.333 0.00 0.00 0.00 2.29
2883 3102 6.696411 TGTTGGTTTCATTCTGTGTTTTTCT 58.304 32.000 0.00 0.00 0.00 2.52
2884 3103 7.831753 TGTTGGTTTCATTCTGTGTTTTTCTA 58.168 30.769 0.00 0.00 0.00 2.10
2885 3104 7.757624 TGTTGGTTTCATTCTGTGTTTTTCTAC 59.242 33.333 0.00 0.00 0.00 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 3.211045 TCTTCACCTGGTACAAACAAGC 58.789 45.455 0.00 0.00 38.70 4.01
20 21 6.653320 TCATACAATCTTCACCTGGTACAAAC 59.347 38.462 0.00 0.00 38.70 2.93
28 29 9.498176 TGATATTGATCATACAATCTTCACCTG 57.502 33.333 0.00 0.00 40.36 4.00
173 178 7.505923 GGTTGAGGGTAAGCAAGGAAATATTAT 59.494 37.037 0.00 0.00 0.00 1.28
174 179 6.831868 GGTTGAGGGTAAGCAAGGAAATATTA 59.168 38.462 0.00 0.00 0.00 0.98
175 180 5.656859 GGTTGAGGGTAAGCAAGGAAATATT 59.343 40.000 0.00 0.00 0.00 1.28
186 191 5.470437 GCTTAATCTATGGTTGAGGGTAAGC 59.530 44.000 0.00 0.00 33.52 3.09
270 275 4.439968 AGTAGGAGTAAGCAAATAACCGC 58.560 43.478 0.00 0.00 0.00 5.68
287 292 4.837093 TCAATGGTTGAGGGTAAGTAGG 57.163 45.455 0.00 0.00 34.08 3.18
288 293 7.280205 GTGTAATCAATGGTTGAGGGTAAGTAG 59.720 40.741 0.00 0.00 43.98 2.57
289 294 7.107542 GTGTAATCAATGGTTGAGGGTAAGTA 58.892 38.462 0.00 0.00 43.98 2.24
290 295 5.944007 GTGTAATCAATGGTTGAGGGTAAGT 59.056 40.000 0.00 0.00 43.98 2.24
293 298 5.506730 TGTGTAATCAATGGTTGAGGGTA 57.493 39.130 0.00 0.00 43.98 3.69
295 300 5.920193 ATTGTGTAATCAATGGTTGAGGG 57.080 39.130 0.00 0.00 43.98 4.30
417 424 9.538508 GGTACGTACTAATATGGAAGAAAATGT 57.461 33.333 24.07 0.00 0.00 2.71
418 425 9.537192 TGGTACGTACTAATATGGAAGAAAATG 57.463 33.333 24.07 0.00 0.00 2.32
432 439 7.886629 ATAATCTTCACCTGGTACGTACTAA 57.113 36.000 24.07 12.60 0.00 2.24
434 441 7.722728 TCATATAATCTTCACCTGGTACGTACT 59.277 37.037 24.07 2.40 0.00 2.73
443 450 9.498176 TGACATTGATCATATAATCTTCACCTG 57.502 33.333 0.00 0.00 0.00 4.00
508 518 4.884164 TCCCGCAAAATTTTTGTTTTCCAT 59.116 33.333 19.98 0.00 0.00 3.41
512 522 6.533012 CCATTTTCCCGCAAAATTTTTGTTTT 59.467 30.769 19.98 0.00 41.19 2.43
522 532 4.939052 TTCTTACCATTTTCCCGCAAAA 57.061 36.364 0.00 0.00 38.38 2.44
527 537 6.367695 GGTCAATTTTTCTTACCATTTTCCCG 59.632 38.462 0.00 0.00 0.00 5.14
541 551 5.163652 CGGAGGGAATAGTGGTCAATTTTTC 60.164 44.000 0.00 0.00 0.00 2.29
542 552 4.705023 CGGAGGGAATAGTGGTCAATTTTT 59.295 41.667 0.00 0.00 0.00 1.94
556 566 5.566469 TCTTATTTTGTGAACGGAGGGAAT 58.434 37.500 0.00 0.00 0.00 3.01
557 567 4.975631 TCTTATTTTGTGAACGGAGGGAA 58.024 39.130 0.00 0.00 0.00 3.97
647 717 4.572985 TTCAATATGGTCTACGTACGGG 57.427 45.455 21.06 11.95 0.00 5.28
652 722 7.915293 TTGAACATTTCAATATGGTCTACGT 57.085 32.000 0.00 0.00 44.21 3.57
673 743 7.546316 TCCGTTCATGAATATAAGACGTTTTGA 59.454 33.333 12.12 0.00 0.00 2.69
679 749 7.382488 ACTTCATCCGTTCATGAATATAAGACG 59.618 37.037 12.12 9.07 41.06 4.18
680 750 8.594881 ACTTCATCCGTTCATGAATATAAGAC 57.405 34.615 12.12 0.00 41.06 3.01
772 842 4.287067 ACAGTTGGTGTGAGTTCAGGATAT 59.713 41.667 0.00 0.00 38.28 1.63
846 917 2.281070 ATGACGATGCCGATGCCC 60.281 61.111 0.00 0.00 39.50 5.36
943 1015 1.951602 GCACCCACGGTTTCTAAAAGT 59.048 47.619 0.00 0.00 31.02 2.66
950 1022 4.322385 GCACGCACCCACGGTTTC 62.322 66.667 0.00 0.00 37.37 2.78
965 1037 4.039973 CGGAGACCCTTGGTATTTATAGCA 59.960 45.833 0.00 0.00 35.25 3.49
1026 1098 0.983905 GAAAGAGGAGGGGAGGGGAC 60.984 65.000 0.00 0.00 0.00 4.46
1072 1156 4.886121 GGCGGCGGGTAGTAGTGC 62.886 72.222 9.78 0.00 0.00 4.40
1222 1315 1.454847 CTCCTCCTCCTCGTCCCTG 60.455 68.421 0.00 0.00 0.00 4.45
1288 1390 1.751351 TGCTGCTGCTGGTAGTAGTAG 59.249 52.381 17.00 7.45 41.91 2.57
1289 1391 1.751351 CTGCTGCTGCTGGTAGTAGTA 59.249 52.381 17.00 1.16 40.48 1.82
1290 1392 0.534412 CTGCTGCTGCTGGTAGTAGT 59.466 55.000 17.00 0.00 40.48 2.73
1407 1515 3.879912 GACGAAGACGAAGGGAACA 57.120 52.632 0.00 0.00 42.66 3.18
1435 1543 4.753662 TCCTCCCCCTCACGACGG 62.754 72.222 0.00 0.00 0.00 4.79
1436 1544 3.141488 CTCCTCCCCCTCACGACG 61.141 72.222 0.00 0.00 0.00 5.12
1556 1678 3.026431 GCCATGGCCTTTGCATGCT 62.026 57.895 27.24 0.00 40.13 3.79
1670 1805 9.911788 ATGACTTGTTGAGGAGTTGAATATATT 57.088 29.630 0.00 0.00 0.00 1.28
1671 1806 9.911788 AATGACTTGTTGAGGAGTTGAATATAT 57.088 29.630 0.00 0.00 0.00 0.86
1672 1807 9.166173 CAATGACTTGTTGAGGAGTTGAATATA 57.834 33.333 0.00 0.00 0.00 0.86
1764 1905 9.699703 GTGGTAAGCAATCCAAACTATTAAAAA 57.300 29.630 0.00 0.00 35.38 1.94
1765 1906 8.861086 TGTGGTAAGCAATCCAAACTATTAAAA 58.139 29.630 0.00 0.00 35.38 1.52
1766 1907 8.410673 TGTGGTAAGCAATCCAAACTATTAAA 57.589 30.769 0.00 0.00 35.38 1.52
1767 1908 8.465999 CATGTGGTAAGCAATCCAAACTATTAA 58.534 33.333 0.00 0.00 35.38 1.40
1768 1909 7.613801 ACATGTGGTAAGCAATCCAAACTATTA 59.386 33.333 0.00 0.00 35.38 0.98
1769 1910 6.437162 ACATGTGGTAAGCAATCCAAACTATT 59.563 34.615 0.00 0.00 35.38 1.73
1770 1911 5.951747 ACATGTGGTAAGCAATCCAAACTAT 59.048 36.000 0.00 0.00 35.38 2.12
1771 1912 5.182950 CACATGTGGTAAGCAATCCAAACTA 59.817 40.000 18.51 0.00 35.38 2.24
1772 1913 4.022068 CACATGTGGTAAGCAATCCAAACT 60.022 41.667 18.51 0.00 35.38 2.66
1773 1914 4.236935 CACATGTGGTAAGCAATCCAAAC 58.763 43.478 18.51 0.00 35.38 2.93
1774 1915 3.894427 ACACATGTGGTAAGCAATCCAAA 59.106 39.130 28.64 0.00 35.38 3.28
1775 1916 3.495331 ACACATGTGGTAAGCAATCCAA 58.505 40.909 28.64 0.00 35.38 3.53
1776 1917 3.081061 GACACATGTGGTAAGCAATCCA 58.919 45.455 28.64 0.00 34.19 3.41
1777 1918 3.081061 TGACACATGTGGTAAGCAATCC 58.919 45.455 28.64 6.08 34.19 3.01
1778 1919 3.127548 CCTGACACATGTGGTAAGCAATC 59.872 47.826 28.64 14.99 34.19 2.67
1779 1920 3.084039 CCTGACACATGTGGTAAGCAAT 58.916 45.455 28.64 5.90 34.19 3.56
1780 1921 2.158682 ACCTGACACATGTGGTAAGCAA 60.159 45.455 28.64 6.07 34.19 3.91
1781 1922 1.419762 ACCTGACACATGTGGTAAGCA 59.580 47.619 28.64 16.40 34.19 3.91
1782 1923 1.806542 CACCTGACACATGTGGTAAGC 59.193 52.381 28.64 13.03 34.19 3.09
1783 1924 2.426522 CCACCTGACACATGTGGTAAG 58.573 52.381 28.64 20.64 42.45 2.34
1784 1925 2.559698 CCACCTGACACATGTGGTAA 57.440 50.000 28.64 13.10 42.45 2.85
1788 1929 2.260844 AGAACCACCTGACACATGTG 57.739 50.000 24.25 24.25 31.51 3.21
1789 1930 3.297134 AAAGAACCACCTGACACATGT 57.703 42.857 0.00 0.00 0.00 3.21
1790 1931 3.885297 AGAAAAGAACCACCTGACACATG 59.115 43.478 0.00 0.00 0.00 3.21
1791 1932 4.170468 AGAAAAGAACCACCTGACACAT 57.830 40.909 0.00 0.00 0.00 3.21
1792 1933 3.644966 AGAAAAGAACCACCTGACACA 57.355 42.857 0.00 0.00 0.00 3.72
1793 1934 3.694566 ACAAGAAAAGAACCACCTGACAC 59.305 43.478 0.00 0.00 0.00 3.67
1794 1935 3.963129 ACAAGAAAAGAACCACCTGACA 58.037 40.909 0.00 0.00 0.00 3.58
1795 1936 4.157840 ACAACAAGAAAAGAACCACCTGAC 59.842 41.667 0.00 0.00 0.00 3.51
1796 1937 4.340617 ACAACAAGAAAAGAACCACCTGA 58.659 39.130 0.00 0.00 0.00 3.86
1797 1938 4.718940 ACAACAAGAAAAGAACCACCTG 57.281 40.909 0.00 0.00 0.00 4.00
1798 1939 4.770010 TCAACAACAAGAAAAGAACCACCT 59.230 37.500 0.00 0.00 0.00 4.00
1799 1940 5.066968 TCAACAACAAGAAAAGAACCACC 57.933 39.130 0.00 0.00 0.00 4.61
1800 1941 5.102313 CCTCAACAACAAGAAAAGAACCAC 58.898 41.667 0.00 0.00 0.00 4.16
1801 1942 4.159506 CCCTCAACAACAAGAAAAGAACCA 59.840 41.667 0.00 0.00 0.00 3.67
1802 1943 4.682787 CCCTCAACAACAAGAAAAGAACC 58.317 43.478 0.00 0.00 0.00 3.62
1803 1944 4.112634 GCCCTCAACAACAAGAAAAGAAC 58.887 43.478 0.00 0.00 0.00 3.01
1804 1945 3.181491 CGCCCTCAACAACAAGAAAAGAA 60.181 43.478 0.00 0.00 0.00 2.52
1805 1946 2.357637 CGCCCTCAACAACAAGAAAAGA 59.642 45.455 0.00 0.00 0.00 2.52
1806 1947 2.357637 TCGCCCTCAACAACAAGAAAAG 59.642 45.455 0.00 0.00 0.00 2.27
1807 1948 2.370349 TCGCCCTCAACAACAAGAAAA 58.630 42.857 0.00 0.00 0.00 2.29
1808 1949 2.045561 TCGCCCTCAACAACAAGAAA 57.954 45.000 0.00 0.00 0.00 2.52
1809 1950 2.045561 TTCGCCCTCAACAACAAGAA 57.954 45.000 0.00 0.00 0.00 2.52
1810 1951 1.946768 CTTTCGCCCTCAACAACAAGA 59.053 47.619 0.00 0.00 0.00 3.02
1811 1952 1.946768 TCTTTCGCCCTCAACAACAAG 59.053 47.619 0.00 0.00 0.00 3.16
1825 1966 5.287170 TGCACAGAGATTCAATTCTTTCG 57.713 39.130 0.00 0.00 0.00 3.46
1862 2008 8.132362 CGTCTGTATAGCAGTTCTCTATTTTCT 58.868 37.037 0.00 0.00 45.23 2.52
1863 2009 8.129840 TCGTCTGTATAGCAGTTCTCTATTTTC 58.870 37.037 0.00 0.00 45.23 2.29
1864 2010 7.916450 GTCGTCTGTATAGCAGTTCTCTATTTT 59.084 37.037 0.00 0.00 45.23 1.82
1865 2011 7.067129 TGTCGTCTGTATAGCAGTTCTCTATTT 59.933 37.037 0.00 0.00 45.23 1.40
1866 2012 6.542735 TGTCGTCTGTATAGCAGTTCTCTATT 59.457 38.462 0.00 0.00 45.23 1.73
1867 2013 6.056236 TGTCGTCTGTATAGCAGTTCTCTAT 58.944 40.000 0.00 0.00 45.23 1.98
1868 2014 5.425630 TGTCGTCTGTATAGCAGTTCTCTA 58.574 41.667 0.00 0.00 45.23 2.43
1869 2015 4.262617 TGTCGTCTGTATAGCAGTTCTCT 58.737 43.478 0.00 0.00 45.23 3.10
1870 2016 4.617808 TGTCGTCTGTATAGCAGTTCTC 57.382 45.455 0.00 0.00 45.23 2.87
1871 2017 5.125578 TGAATGTCGTCTGTATAGCAGTTCT 59.874 40.000 0.00 0.00 45.23 3.01
1872 2018 5.230306 GTGAATGTCGTCTGTATAGCAGTTC 59.770 44.000 0.00 0.00 45.23 3.01
1873 2019 5.103000 GTGAATGTCGTCTGTATAGCAGTT 58.897 41.667 0.00 0.00 45.23 3.16
1874 2020 4.157840 TGTGAATGTCGTCTGTATAGCAGT 59.842 41.667 0.00 0.00 45.23 4.40
1875 2021 4.672409 TGTGAATGTCGTCTGTATAGCAG 58.328 43.478 0.00 0.00 46.34 4.24
1876 2022 4.398044 TCTGTGAATGTCGTCTGTATAGCA 59.602 41.667 0.00 0.00 0.00 3.49
1877 2023 4.735822 GTCTGTGAATGTCGTCTGTATAGC 59.264 45.833 0.00 0.00 0.00 2.97
1878 2024 4.964555 CGTCTGTGAATGTCGTCTGTATAG 59.035 45.833 0.00 0.00 0.00 1.31
1879 2025 4.632688 TCGTCTGTGAATGTCGTCTGTATA 59.367 41.667 0.00 0.00 0.00 1.47
1880 2026 3.439129 TCGTCTGTGAATGTCGTCTGTAT 59.561 43.478 0.00 0.00 0.00 2.29
1881 2027 2.809696 TCGTCTGTGAATGTCGTCTGTA 59.190 45.455 0.00 0.00 0.00 2.74
1882 2028 1.607148 TCGTCTGTGAATGTCGTCTGT 59.393 47.619 0.00 0.00 0.00 3.41
1883 2029 2.331809 TCGTCTGTGAATGTCGTCTG 57.668 50.000 0.00 0.00 0.00 3.51
1884 2030 3.577649 AATCGTCTGTGAATGTCGTCT 57.422 42.857 0.00 0.00 0.00 4.18
1885 2031 3.673338 TGAAATCGTCTGTGAATGTCGTC 59.327 43.478 0.00 0.00 0.00 4.20
1886 2032 3.649073 TGAAATCGTCTGTGAATGTCGT 58.351 40.909 0.00 0.00 0.00 4.34
1887 2033 3.482598 GCTGAAATCGTCTGTGAATGTCG 60.483 47.826 0.00 0.00 0.00 4.35
1888 2034 3.433274 TGCTGAAATCGTCTGTGAATGTC 59.567 43.478 0.00 0.00 0.00 3.06
1889 2035 3.187227 GTGCTGAAATCGTCTGTGAATGT 59.813 43.478 0.00 0.00 0.00 2.71
1890 2036 3.722957 CGTGCTGAAATCGTCTGTGAATG 60.723 47.826 0.00 0.00 0.00 2.67
1891 2037 2.413112 CGTGCTGAAATCGTCTGTGAAT 59.587 45.455 0.00 0.00 0.00 2.57
1892 2038 1.792367 CGTGCTGAAATCGTCTGTGAA 59.208 47.619 0.00 0.00 0.00 3.18
1893 2039 1.000717 TCGTGCTGAAATCGTCTGTGA 60.001 47.619 0.00 0.00 0.00 3.58
1894 2040 1.125021 GTCGTGCTGAAATCGTCTGTG 59.875 52.381 0.00 0.00 0.00 3.66
1895 2041 1.269569 TGTCGTGCTGAAATCGTCTGT 60.270 47.619 0.00 0.00 0.00 3.41
1896 2042 1.125021 GTGTCGTGCTGAAATCGTCTG 59.875 52.381 0.00 0.00 0.00 3.51
1897 2043 1.000163 AGTGTCGTGCTGAAATCGTCT 60.000 47.619 0.00 0.00 0.00 4.18
1898 2044 1.387084 GAGTGTCGTGCTGAAATCGTC 59.613 52.381 0.00 0.00 0.00 4.20
1899 2045 1.419374 GAGTGTCGTGCTGAAATCGT 58.581 50.000 0.00 0.00 0.00 3.73
1900 2046 0.716108 GGAGTGTCGTGCTGAAATCG 59.284 55.000 0.00 0.00 0.00 3.34
1901 2047 1.795768 TGGAGTGTCGTGCTGAAATC 58.204 50.000 0.00 0.00 0.00 2.17
1902 2048 2.027745 AGATGGAGTGTCGTGCTGAAAT 60.028 45.455 0.00 0.00 0.00 2.17
1903 2049 1.344438 AGATGGAGTGTCGTGCTGAAA 59.656 47.619 0.00 0.00 0.00 2.69
1904 2050 0.969149 AGATGGAGTGTCGTGCTGAA 59.031 50.000 0.00 0.00 0.00 3.02
1905 2051 0.528017 GAGATGGAGTGTCGTGCTGA 59.472 55.000 0.00 0.00 0.00 4.26
1906 2052 0.244721 TGAGATGGAGTGTCGTGCTG 59.755 55.000 0.00 0.00 0.00 4.41
1907 2053 0.244994 GTGAGATGGAGTGTCGTGCT 59.755 55.000 0.00 0.00 0.00 4.40
1908 2054 0.038251 TGTGAGATGGAGTGTCGTGC 60.038 55.000 0.00 0.00 0.00 5.34
1909 2055 1.670087 GGTGTGAGATGGAGTGTCGTG 60.670 57.143 0.00 0.00 0.00 4.35
1910 2056 0.603569 GGTGTGAGATGGAGTGTCGT 59.396 55.000 0.00 0.00 0.00 4.34
1911 2057 0.603065 TGGTGTGAGATGGAGTGTCG 59.397 55.000 0.00 0.00 0.00 4.35
1912 2058 3.265791 GAATGGTGTGAGATGGAGTGTC 58.734 50.000 0.00 0.00 0.00 3.67
1913 2059 2.639347 TGAATGGTGTGAGATGGAGTGT 59.361 45.455 0.00 0.00 0.00 3.55
1914 2060 3.339253 TGAATGGTGTGAGATGGAGTG 57.661 47.619 0.00 0.00 0.00 3.51
1915 2061 4.019051 TGAATGAATGGTGTGAGATGGAGT 60.019 41.667 0.00 0.00 0.00 3.85
1916 2062 4.520179 TGAATGAATGGTGTGAGATGGAG 58.480 43.478 0.00 0.00 0.00 3.86
1917 2063 4.573021 TGAATGAATGGTGTGAGATGGA 57.427 40.909 0.00 0.00 0.00 3.41
1918 2064 4.945543 TCTTGAATGAATGGTGTGAGATGG 59.054 41.667 0.00 0.00 0.00 3.51
1919 2065 5.413523 TGTCTTGAATGAATGGTGTGAGATG 59.586 40.000 0.00 0.00 0.00 2.90
1920 2066 5.413833 GTGTCTTGAATGAATGGTGTGAGAT 59.586 40.000 0.00 0.00 0.00 2.75
1921 2067 4.756642 GTGTCTTGAATGAATGGTGTGAGA 59.243 41.667 0.00 0.00 0.00 3.27
1922 2068 4.083110 GGTGTCTTGAATGAATGGTGTGAG 60.083 45.833 0.00 0.00 0.00 3.51
1923 2069 3.820467 GGTGTCTTGAATGAATGGTGTGA 59.180 43.478 0.00 0.00 0.00 3.58
1924 2070 3.569277 TGGTGTCTTGAATGAATGGTGTG 59.431 43.478 0.00 0.00 0.00 3.82
1925 2071 3.831323 TGGTGTCTTGAATGAATGGTGT 58.169 40.909 0.00 0.00 0.00 4.16
1926 2072 4.852134 TTGGTGTCTTGAATGAATGGTG 57.148 40.909 0.00 0.00 0.00 4.17
1927 2073 4.834496 ACATTGGTGTCTTGAATGAATGGT 59.166 37.500 0.00 0.00 31.41 3.55
1928 2074 5.395682 ACATTGGTGTCTTGAATGAATGG 57.604 39.130 0.00 0.00 31.41 3.16
1929 2075 6.912082 TGTACATTGGTGTCTTGAATGAATG 58.088 36.000 0.00 0.00 39.77 2.67
1930 2076 6.942005 TCTGTACATTGGTGTCTTGAATGAAT 59.058 34.615 0.00 0.00 39.77 2.57
1931 2077 6.295249 TCTGTACATTGGTGTCTTGAATGAA 58.705 36.000 0.00 0.00 39.77 2.57
1932 2078 5.863965 TCTGTACATTGGTGTCTTGAATGA 58.136 37.500 0.00 0.00 39.77 2.57
1933 2079 6.558771 TTCTGTACATTGGTGTCTTGAATG 57.441 37.500 0.00 0.00 39.77 2.67
1934 2080 6.772716 ACTTTCTGTACATTGGTGTCTTGAAT 59.227 34.615 0.00 0.00 39.77 2.57
1935 2081 6.119536 ACTTTCTGTACATTGGTGTCTTGAA 58.880 36.000 0.00 0.00 39.77 2.69
1936 2082 5.680619 ACTTTCTGTACATTGGTGTCTTGA 58.319 37.500 0.00 0.00 39.77 3.02
1937 2083 6.183360 ACAACTTTCTGTACATTGGTGTCTTG 60.183 38.462 10.13 2.53 39.77 3.02
1938 2084 5.885912 ACAACTTTCTGTACATTGGTGTCTT 59.114 36.000 10.13 0.00 39.77 3.01
1939 2085 5.437060 ACAACTTTCTGTACATTGGTGTCT 58.563 37.500 10.13 0.00 39.77 3.41
1940 2086 5.751243 ACAACTTTCTGTACATTGGTGTC 57.249 39.130 10.13 0.00 39.77 3.67
1941 2087 5.163561 CCAACAACTTTCTGTACATTGGTGT 60.164 40.000 18.23 11.14 36.45 4.16
1942 2088 5.067153 TCCAACAACTTTCTGTACATTGGTG 59.933 40.000 14.53 14.53 37.65 4.17
1943 2089 5.197451 TCCAACAACTTTCTGTACATTGGT 58.803 37.500 16.33 5.84 36.85 3.67
1944 2090 5.766150 TCCAACAACTTTCTGTACATTGG 57.234 39.130 12.42 12.42 36.85 3.16
1945 2091 7.920151 TCAAATCCAACAACTTTCTGTACATTG 59.080 33.333 0.00 0.00 0.00 2.82
1946 2092 8.006298 TCAAATCCAACAACTTTCTGTACATT 57.994 30.769 0.00 0.00 0.00 2.71
1947 2093 7.581213 TCAAATCCAACAACTTTCTGTACAT 57.419 32.000 0.00 0.00 0.00 2.29
1948 2094 7.397892 TTCAAATCCAACAACTTTCTGTACA 57.602 32.000 0.00 0.00 0.00 2.90
1949 2095 8.871686 ATTTCAAATCCAACAACTTTCTGTAC 57.128 30.769 0.00 0.00 0.00 2.90
1950 2096 7.860373 CGATTTCAAATCCAACAACTTTCTGTA 59.140 33.333 4.47 0.00 0.00 2.74
1951 2097 6.697019 CGATTTCAAATCCAACAACTTTCTGT 59.303 34.615 4.47 0.00 0.00 3.41
1952 2098 6.144402 CCGATTTCAAATCCAACAACTTTCTG 59.856 38.462 4.47 0.00 0.00 3.02
1953 2099 6.215845 CCGATTTCAAATCCAACAACTTTCT 58.784 36.000 4.47 0.00 0.00 2.52
1954 2100 5.107491 GCCGATTTCAAATCCAACAACTTTC 60.107 40.000 4.47 0.00 0.00 2.62
1955 2101 4.749598 GCCGATTTCAAATCCAACAACTTT 59.250 37.500 4.47 0.00 0.00 2.66
1956 2102 4.039124 AGCCGATTTCAAATCCAACAACTT 59.961 37.500 4.47 0.00 0.00 2.66
1957 2103 3.573967 AGCCGATTTCAAATCCAACAACT 59.426 39.130 4.47 0.00 0.00 3.16
1958 2104 3.913089 AGCCGATTTCAAATCCAACAAC 58.087 40.909 4.47 0.00 0.00 3.32
1959 2105 3.571828 TGAGCCGATTTCAAATCCAACAA 59.428 39.130 4.47 0.00 0.00 2.83
1960 2106 3.153130 TGAGCCGATTTCAAATCCAACA 58.847 40.909 4.47 0.00 0.00 3.33
1961 2107 3.428045 CCTGAGCCGATTTCAAATCCAAC 60.428 47.826 4.47 0.00 0.00 3.77
1962 2108 2.754552 CCTGAGCCGATTTCAAATCCAA 59.245 45.455 4.47 0.00 0.00 3.53
1963 2109 2.026356 TCCTGAGCCGATTTCAAATCCA 60.026 45.455 4.47 0.00 0.00 3.41
1964 2110 2.643551 TCCTGAGCCGATTTCAAATCC 58.356 47.619 4.47 0.00 0.00 3.01
1965 2111 3.059325 CGATCCTGAGCCGATTTCAAATC 60.059 47.826 0.00 0.00 0.00 2.17
1966 2112 2.874701 CGATCCTGAGCCGATTTCAAAT 59.125 45.455 0.00 0.00 0.00 2.32
1967 2113 2.279741 CGATCCTGAGCCGATTTCAAA 58.720 47.619 0.00 0.00 0.00 2.69
1968 2114 1.207089 ACGATCCTGAGCCGATTTCAA 59.793 47.619 0.00 0.00 0.00 2.69
1969 2115 0.824109 ACGATCCTGAGCCGATTTCA 59.176 50.000 0.00 0.00 0.00 2.69
1970 2116 1.212616 CACGATCCTGAGCCGATTTC 58.787 55.000 0.00 0.00 0.00 2.17
1971 2117 0.811616 GCACGATCCTGAGCCGATTT 60.812 55.000 0.00 0.00 0.00 2.17
1972 2118 1.227380 GCACGATCCTGAGCCGATT 60.227 57.895 0.00 0.00 0.00 3.34
1973 2119 1.960040 TTGCACGATCCTGAGCCGAT 61.960 55.000 0.00 0.00 0.00 4.18
1974 2120 2.563050 CTTGCACGATCCTGAGCCGA 62.563 60.000 0.00 0.00 0.00 5.54
1975 2121 2.125552 TTGCACGATCCTGAGCCG 60.126 61.111 0.00 0.00 0.00 5.52
1976 2122 2.467826 GCTTGCACGATCCTGAGCC 61.468 63.158 0.00 0.00 0.00 4.70
1977 2123 1.300971 TTGCTTGCACGATCCTGAGC 61.301 55.000 0.00 0.00 0.00 4.26
1978 2124 1.159285 TTTGCTTGCACGATCCTGAG 58.841 50.000 0.00 0.00 0.00 3.35
1979 2125 1.825090 ATTTGCTTGCACGATCCTGA 58.175 45.000 0.00 0.00 0.00 3.86
1980 2126 3.605461 CGATATTTGCTTGCACGATCCTG 60.605 47.826 0.00 0.00 0.00 3.86
1981 2127 2.545526 CGATATTTGCTTGCACGATCCT 59.454 45.455 0.00 0.00 0.00 3.24
1982 2128 2.287915 ACGATATTTGCTTGCACGATCC 59.712 45.455 9.00 0.00 0.00 3.36
1983 2129 3.246226 AGACGATATTTGCTTGCACGATC 59.754 43.478 9.00 5.43 0.00 3.69
1984 2130 3.001634 CAGACGATATTTGCTTGCACGAT 59.998 43.478 9.00 3.51 0.00 3.73
1985 2131 2.348362 CAGACGATATTTGCTTGCACGA 59.652 45.455 9.00 0.00 0.00 4.35
1986 2132 2.094258 ACAGACGATATTTGCTTGCACG 59.906 45.455 0.00 0.00 0.00 5.34
1987 2133 3.125146 TCACAGACGATATTTGCTTGCAC 59.875 43.478 0.00 0.00 0.00 4.57
1988 2134 3.333804 TCACAGACGATATTTGCTTGCA 58.666 40.909 0.00 0.00 0.00 4.08
1989 2135 4.142816 ACTTCACAGACGATATTTGCTTGC 60.143 41.667 0.00 0.00 0.00 4.01
1990 2136 5.536554 ACTTCACAGACGATATTTGCTTG 57.463 39.130 0.00 0.00 0.00 4.01
1991 2137 6.398918 ACTACTTCACAGACGATATTTGCTT 58.601 36.000 0.00 0.00 0.00 3.91
1992 2138 5.967088 ACTACTTCACAGACGATATTTGCT 58.033 37.500 0.00 0.00 0.00 3.91
1993 2139 6.648725 AACTACTTCACAGACGATATTTGC 57.351 37.500 0.00 0.00 0.00 3.68
1994 2140 7.061905 ACGAAACTACTTCACAGACGATATTTG 59.938 37.037 0.00 0.00 33.17 2.32
1995 2141 7.088905 ACGAAACTACTTCACAGACGATATTT 58.911 34.615 0.00 0.00 33.17 1.40
1996 2142 6.618811 ACGAAACTACTTCACAGACGATATT 58.381 36.000 0.00 0.00 33.17 1.28
1997 2143 6.192234 ACGAAACTACTTCACAGACGATAT 57.808 37.500 0.00 0.00 33.17 1.63
1998 2144 5.618056 ACGAAACTACTTCACAGACGATA 57.382 39.130 0.00 0.00 33.17 2.92
1999 2145 4.500603 ACGAAACTACTTCACAGACGAT 57.499 40.909 0.00 0.00 33.17 3.73
2000 2146 3.976793 ACGAAACTACTTCACAGACGA 57.023 42.857 0.00 0.00 33.17 4.20
2001 2147 5.027206 TCTACGAAACTACTTCACAGACG 57.973 43.478 0.00 0.00 33.17 4.18
2002 2148 7.689953 TTTTCTACGAAACTACTTCACAGAC 57.310 36.000 0.00 0.00 33.17 3.51
2003 2149 9.403110 GTATTTTCTACGAAACTACTTCACAGA 57.597 33.333 8.63 0.00 33.17 3.41
2004 2150 9.188588 TGTATTTTCTACGAAACTACTTCACAG 57.811 33.333 14.01 0.00 33.17 3.66
2005 2151 9.188588 CTGTATTTTCTACGAAACTACTTCACA 57.811 33.333 14.01 1.33 33.17 3.58
2006 2152 9.189723 ACTGTATTTTCTACGAAACTACTTCAC 57.810 33.333 14.01 0.00 33.17 3.18
2007 2153 9.188588 CACTGTATTTTCTACGAAACTACTTCA 57.811 33.333 14.01 0.17 33.17 3.02
2008 2154 8.160976 GCACTGTATTTTCTACGAAACTACTTC 58.839 37.037 14.01 0.00 0.00 3.01
2009 2155 7.654520 TGCACTGTATTTTCTACGAAACTACTT 59.345 33.333 14.01 3.72 0.00 2.24
2010 2156 7.149973 TGCACTGTATTTTCTACGAAACTACT 58.850 34.615 14.01 0.00 0.00 2.57
2011 2157 7.342318 TGCACTGTATTTTCTACGAAACTAC 57.658 36.000 8.85 8.85 0.00 2.73
2012 2158 8.542497 AATGCACTGTATTTTCTACGAAACTA 57.458 30.769 0.00 0.00 0.00 2.24
2013 2159 7.435068 AATGCACTGTATTTTCTACGAAACT 57.565 32.000 0.00 0.00 0.00 2.66
2014 2160 8.417176 CAAAATGCACTGTATTTTCTACGAAAC 58.583 33.333 13.20 0.00 36.02 2.78
2015 2161 7.114247 GCAAAATGCACTGTATTTTCTACGAAA 59.886 33.333 13.20 0.00 44.26 3.46
2016 2162 6.580791 GCAAAATGCACTGTATTTTCTACGAA 59.419 34.615 13.20 0.00 44.26 3.85
2017 2163 6.083630 GCAAAATGCACTGTATTTTCTACGA 58.916 36.000 13.20 0.00 44.26 3.43
2018 2164 6.304788 GCAAAATGCACTGTATTTTCTACG 57.695 37.500 13.20 5.74 44.26 3.51
2040 2186 2.369394 CCCCATCTACAACAAGGAAGC 58.631 52.381 0.00 0.00 0.00 3.86
2100 2280 1.819229 CCACCTCCCATGTCTCTCG 59.181 63.158 0.00 0.00 0.00 4.04
2183 2385 2.048127 GCCACCGTCTGTCTGTCC 60.048 66.667 0.00 0.00 0.00 4.02
2237 2439 0.824109 TGAACATGAGCCTAGGACGG 59.176 55.000 14.75 4.82 0.00 4.79
2359 2564 5.843673 AAACCATCATAAACACACACACA 57.156 34.783 0.00 0.00 0.00 3.72
2360 2565 5.461737 CCAAAACCATCATAAACACACACAC 59.538 40.000 0.00 0.00 0.00 3.82
2361 2566 5.127845 ACCAAAACCATCATAAACACACACA 59.872 36.000 0.00 0.00 0.00 3.72
2362 2567 5.461737 CACCAAAACCATCATAAACACACAC 59.538 40.000 0.00 0.00 0.00 3.82
2379 2596 1.008309 GCCGCTTTACGCACCAAAA 60.008 52.632 0.00 0.00 41.76 2.44
2399 2616 4.676986 GCTTTGCCCCCTTTATTTAACTCG 60.677 45.833 0.00 0.00 0.00 4.18
2481 2698 2.075426 GAGCAACAGCCGCCAGTTTT 62.075 55.000 0.00 0.00 0.00 2.43
2539 2757 3.628032 GCTGTCTTCCTATAAAGCCAACC 59.372 47.826 0.00 0.00 0.00 3.77
2553 2771 1.887242 TGCCACACGTGCTGTCTTC 60.887 57.895 17.22 0.00 0.00 2.87
2586 2804 1.740025 GGTGCTAGACATGCTGGAAAC 59.260 52.381 0.00 0.00 0.00 2.78
2594 2812 3.136763 CAATGCCTAGGTGCTAGACATG 58.863 50.000 11.31 0.00 36.43 3.21
2623 2842 2.817834 TTTCGAAGGATGCCGGCG 60.818 61.111 23.90 5.27 0.00 6.46
2634 2853 3.537806 GCTTCGTTTTCATCGTTTCGAA 58.462 40.909 0.00 0.00 39.99 3.71
2635 2854 2.409244 CGCTTCGTTTTCATCGTTTCGA 60.409 45.455 0.00 0.00 41.13 3.71
2636 2855 1.889955 CGCTTCGTTTTCATCGTTTCG 59.110 47.619 0.00 0.00 0.00 3.46
2637 2856 3.163642 TCGCTTCGTTTTCATCGTTTC 57.836 42.857 0.00 0.00 0.00 2.78
2638 2857 3.595709 TTCGCTTCGTTTTCATCGTTT 57.404 38.095 0.00 0.00 0.00 3.60
2639 2858 3.595709 TTTCGCTTCGTTTTCATCGTT 57.404 38.095 0.00 0.00 0.00 3.85
2640 2859 3.001939 AGTTTTCGCTTCGTTTTCATCGT 59.998 39.130 0.00 0.00 0.00 3.73
2641 2860 3.541711 AGTTTTCGCTTCGTTTTCATCG 58.458 40.909 0.00 0.00 0.00 3.84
2642 2861 5.866503 AAAGTTTTCGCTTCGTTTTCATC 57.133 34.783 0.00 0.00 0.00 2.92
2643 2862 6.090223 ACAAAAAGTTTTCGCTTCGTTTTCAT 59.910 30.769 0.32 0.00 0.00 2.57
2644 2863 5.402867 ACAAAAAGTTTTCGCTTCGTTTTCA 59.597 32.000 0.32 0.00 0.00 2.69
2645 2864 5.839188 ACAAAAAGTTTTCGCTTCGTTTTC 58.161 33.333 0.32 0.00 0.00 2.29
2646 2865 5.832568 ACAAAAAGTTTTCGCTTCGTTTT 57.167 30.435 0.32 0.00 0.00 2.43
2647 2866 5.832568 AACAAAAAGTTTTCGCTTCGTTT 57.167 30.435 0.32 0.00 37.03 3.60
2659 2878 4.195225 TCTGCCGGAAAAACAAAAAGTT 57.805 36.364 5.05 0.00 43.89 2.66
2660 2879 3.878160 TCTGCCGGAAAAACAAAAAGT 57.122 38.095 5.05 0.00 0.00 2.66
2661 2880 5.538067 TTTTCTGCCGGAAAAACAAAAAG 57.462 34.783 5.05 0.00 46.84 2.27
2670 2889 4.320641 CCGTTTCTATTTTTCTGCCGGAAA 60.321 41.667 5.05 0.00 41.58 3.13
2671 2890 3.189702 CCGTTTCTATTTTTCTGCCGGAA 59.810 43.478 5.05 0.00 35.04 4.30
2672 2891 2.745281 CCGTTTCTATTTTTCTGCCGGA 59.255 45.455 5.05 0.00 35.04 5.14
2673 2892 2.745281 TCCGTTTCTATTTTTCTGCCGG 59.255 45.455 0.00 0.00 0.00 6.13
2674 2893 3.682858 TCTCCGTTTCTATTTTTCTGCCG 59.317 43.478 0.00 0.00 0.00 5.69
2675 2894 4.935808 TCTCTCCGTTTCTATTTTTCTGCC 59.064 41.667 0.00 0.00 0.00 4.85
2676 2895 6.481954 TTCTCTCCGTTTCTATTTTTCTGC 57.518 37.500 0.00 0.00 0.00 4.26
2677 2896 8.017946 CCTTTTCTCTCCGTTTCTATTTTTCTG 58.982 37.037 0.00 0.00 0.00 3.02
2678 2897 7.175119 CCCTTTTCTCTCCGTTTCTATTTTTCT 59.825 37.037 0.00 0.00 0.00 2.52
2679 2898 7.306213 CCCTTTTCTCTCCGTTTCTATTTTTC 58.694 38.462 0.00 0.00 0.00 2.29
2680 2899 6.208797 CCCCTTTTCTCTCCGTTTCTATTTTT 59.791 38.462 0.00 0.00 0.00 1.94
2681 2900 5.710567 CCCCTTTTCTCTCCGTTTCTATTTT 59.289 40.000 0.00 0.00 0.00 1.82
2682 2901 5.254115 CCCCTTTTCTCTCCGTTTCTATTT 58.746 41.667 0.00 0.00 0.00 1.40
2683 2902 4.324331 CCCCCTTTTCTCTCCGTTTCTATT 60.324 45.833 0.00 0.00 0.00 1.73
2684 2903 3.200165 CCCCCTTTTCTCTCCGTTTCTAT 59.800 47.826 0.00 0.00 0.00 1.98
2685 2904 2.570302 CCCCCTTTTCTCTCCGTTTCTA 59.430 50.000 0.00 0.00 0.00 2.10
2686 2905 1.351350 CCCCCTTTTCTCTCCGTTTCT 59.649 52.381 0.00 0.00 0.00 2.52
2687 2906 1.350019 TCCCCCTTTTCTCTCCGTTTC 59.650 52.381 0.00 0.00 0.00 2.78
2688 2907 1.441695 TCCCCCTTTTCTCTCCGTTT 58.558 50.000 0.00 0.00 0.00 3.60
2689 2908 1.441695 TTCCCCCTTTTCTCTCCGTT 58.558 50.000 0.00 0.00 0.00 4.44
2690 2909 1.441695 TTTCCCCCTTTTCTCTCCGT 58.558 50.000 0.00 0.00 0.00 4.69
2691 2910 2.026262 TCATTTCCCCCTTTTCTCTCCG 60.026 50.000 0.00 0.00 0.00 4.63
2692 2911 3.739401 TCATTTCCCCCTTTTCTCTCC 57.261 47.619 0.00 0.00 0.00 3.71
2693 2912 4.081972 GCTTTCATTTCCCCCTTTTCTCTC 60.082 45.833 0.00 0.00 0.00 3.20
2694 2913 3.834813 GCTTTCATTTCCCCCTTTTCTCT 59.165 43.478 0.00 0.00 0.00 3.10
2695 2914 3.367395 CGCTTTCATTTCCCCCTTTTCTC 60.367 47.826 0.00 0.00 0.00 2.87
2696 2915 2.562738 CGCTTTCATTTCCCCCTTTTCT 59.437 45.455 0.00 0.00 0.00 2.52
2697 2916 2.930887 GCGCTTTCATTTCCCCCTTTTC 60.931 50.000 0.00 0.00 0.00 2.29
2698 2917 1.001974 GCGCTTTCATTTCCCCCTTTT 59.998 47.619 0.00 0.00 0.00 2.27
2699 2918 0.608130 GCGCTTTCATTTCCCCCTTT 59.392 50.000 0.00 0.00 0.00 3.11
2700 2919 0.541764 TGCGCTTTCATTTCCCCCTT 60.542 50.000 9.73 0.00 0.00 3.95
2701 2920 0.967380 CTGCGCTTTCATTTCCCCCT 60.967 55.000 9.73 0.00 0.00 4.79
2702 2921 1.512694 CTGCGCTTTCATTTCCCCC 59.487 57.895 9.73 0.00 0.00 5.40
2703 2922 1.153765 GCTGCGCTTTCATTTCCCC 60.154 57.895 9.73 0.00 0.00 4.81
2704 2923 0.179153 GAGCTGCGCTTTCATTTCCC 60.179 55.000 9.73 0.00 39.88 3.97
2705 2924 0.522076 CGAGCTGCGCTTTCATTTCC 60.522 55.000 9.73 0.00 39.88 3.13
2706 2925 2.921996 CGAGCTGCGCTTTCATTTC 58.078 52.632 9.73 0.00 39.88 2.17
2717 2936 0.661483 GTTTCTGGTTTGCGAGCTGC 60.661 55.000 0.00 0.00 46.70 5.25
2718 2937 0.384725 CGTTTCTGGTTTGCGAGCTG 60.385 55.000 0.00 0.00 0.00 4.24
2719 2938 1.507141 CCGTTTCTGGTTTGCGAGCT 61.507 55.000 0.00 0.00 0.00 4.09
2720 2939 1.082104 CCGTTTCTGGTTTGCGAGC 60.082 57.895 0.00 0.00 0.00 5.03
2721 2940 0.941542 TTCCGTTTCTGGTTTGCGAG 59.058 50.000 0.00 0.00 0.00 5.03
2722 2941 1.380524 TTTCCGTTTCTGGTTTGCGA 58.619 45.000 0.00 0.00 0.00 5.10
2723 2942 2.050691 CATTTCCGTTTCTGGTTTGCG 58.949 47.619 0.00 0.00 0.00 4.85
2724 2943 3.363341 TCATTTCCGTTTCTGGTTTGC 57.637 42.857 0.00 0.00 0.00 3.68
2725 2944 5.005299 GTGTTTCATTTCCGTTTCTGGTTTG 59.995 40.000 0.00 0.00 0.00 2.93
2726 2945 5.105513 AGTGTTTCATTTCCGTTTCTGGTTT 60.106 36.000 0.00 0.00 0.00 3.27
2727 2946 4.401202 AGTGTTTCATTTCCGTTTCTGGTT 59.599 37.500 0.00 0.00 0.00 3.67
2728 2947 3.951680 AGTGTTTCATTTCCGTTTCTGGT 59.048 39.130 0.00 0.00 0.00 4.00
2729 2948 4.036262 TGAGTGTTTCATTTCCGTTTCTGG 59.964 41.667 0.00 0.00 0.00 3.86
2730 2949 5.168526 TGAGTGTTTCATTTCCGTTTCTG 57.831 39.130 0.00 0.00 0.00 3.02
2731 2950 4.261197 GCTGAGTGTTTCATTTCCGTTTCT 60.261 41.667 0.00 0.00 34.68 2.52
2732 2951 3.975035 GCTGAGTGTTTCATTTCCGTTTC 59.025 43.478 0.00 0.00 34.68 2.78
2733 2952 3.632145 AGCTGAGTGTTTCATTTCCGTTT 59.368 39.130 0.00 0.00 34.68 3.60
2734 2953 3.214328 AGCTGAGTGTTTCATTTCCGTT 58.786 40.909 0.00 0.00 34.68 4.44
2735 2954 2.851195 AGCTGAGTGTTTCATTTCCGT 58.149 42.857 0.00 0.00 34.68 4.69
2736 2955 3.250762 TGAAGCTGAGTGTTTCATTTCCG 59.749 43.478 0.00 0.00 40.20 4.30
2737 2956 4.836125 TGAAGCTGAGTGTTTCATTTCC 57.164 40.909 0.00 0.00 40.20 3.13
2742 2961 4.206375 TGGAAATGAAGCTGAGTGTTTCA 58.794 39.130 0.00 0.00 46.89 2.69
2743 2962 4.836125 TGGAAATGAAGCTGAGTGTTTC 57.164 40.909 0.00 0.00 36.58 2.78
2744 2963 4.646492 ACTTGGAAATGAAGCTGAGTGTTT 59.354 37.500 0.00 0.00 0.00 2.83
2745 2964 4.210331 ACTTGGAAATGAAGCTGAGTGTT 58.790 39.130 0.00 0.00 0.00 3.32
2746 2965 3.825328 ACTTGGAAATGAAGCTGAGTGT 58.175 40.909 0.00 0.00 0.00 3.55
2747 2966 4.843220 AACTTGGAAATGAAGCTGAGTG 57.157 40.909 0.00 0.00 0.00 3.51
2748 2967 5.859205 AAAACTTGGAAATGAAGCTGAGT 57.141 34.783 0.00 0.00 0.00 3.41
2836 3055 5.438761 AAGTATCACTGAACTTTGGCAAC 57.561 39.130 0.00 0.00 32.00 4.17
2842 3061 7.404671 AACCAACAAAGTATCACTGAACTTT 57.595 32.000 10.88 10.88 44.62 2.66
2843 3062 7.122055 TGAAACCAACAAAGTATCACTGAACTT 59.878 33.333 2.53 2.53 37.54 2.66
2844 3063 6.601613 TGAAACCAACAAAGTATCACTGAACT 59.398 34.615 0.00 0.00 0.00 3.01
2845 3064 6.791303 TGAAACCAACAAAGTATCACTGAAC 58.209 36.000 0.00 0.00 0.00 3.18
2846 3065 7.581213 ATGAAACCAACAAAGTATCACTGAA 57.419 32.000 0.00 0.00 0.00 3.02
2847 3066 7.502226 AGAATGAAACCAACAAAGTATCACTGA 59.498 33.333 0.00 0.00 0.00 3.41
2848 3067 7.592533 CAGAATGAAACCAACAAAGTATCACTG 59.407 37.037 0.00 0.00 39.69 3.66
2849 3068 7.285401 ACAGAATGAAACCAACAAAGTATCACT 59.715 33.333 0.00 0.00 39.69 3.41
2850 3069 7.379529 CACAGAATGAAACCAACAAAGTATCAC 59.620 37.037 0.00 0.00 39.69 3.06
2851 3070 7.068103 ACACAGAATGAAACCAACAAAGTATCA 59.932 33.333 0.00 0.00 39.69 2.15
2852 3071 7.425606 ACACAGAATGAAACCAACAAAGTATC 58.574 34.615 0.00 0.00 39.69 2.24
2853 3072 7.346751 ACACAGAATGAAACCAACAAAGTAT 57.653 32.000 0.00 0.00 39.69 2.12
2854 3073 6.767524 ACACAGAATGAAACCAACAAAGTA 57.232 33.333 0.00 0.00 39.69 2.24
2855 3074 5.659440 ACACAGAATGAAACCAACAAAGT 57.341 34.783 0.00 0.00 39.69 2.66
2856 3075 6.966435 AAACACAGAATGAAACCAACAAAG 57.034 33.333 0.00 0.00 39.69 2.77
2857 3076 7.659390 AGAAAAACACAGAATGAAACCAACAAA 59.341 29.630 0.00 0.00 39.69 2.83
2858 3077 7.158021 AGAAAAACACAGAATGAAACCAACAA 58.842 30.769 0.00 0.00 39.69 2.83
2859 3078 6.696411 AGAAAAACACAGAATGAAACCAACA 58.304 32.000 0.00 0.00 39.69 3.33
2860 3079 8.115491 GTAGAAAAACACAGAATGAAACCAAC 57.885 34.615 0.00 0.00 39.69 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.