Multiple sequence alignment - TraesCS2D01G050000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G050000 chr2D 100.000 2612 0 0 1 2612 18325429 18328040 0.000000e+00 4824.0
1 TraesCS2D01G050000 chr2D 82.656 369 49 6 231 587 14970624 14970989 1.950000e-81 313.0
2 TraesCS2D01G050000 chr2A 92.000 1000 57 8 581 1578 19472085 19473063 0.000000e+00 1382.0
3 TraesCS2D01G050000 chr2A 86.265 415 28 14 1574 1966 19478899 19479306 8.640000e-115 424.0
4 TraesCS2D01G050000 chr2A 96.847 222 7 0 366 587 19471832 19472053 3.170000e-99 372.0
5 TraesCS2D01G050000 chr2A 83.740 369 45 7 231 587 17118125 17118490 4.170000e-88 335.0
6 TraesCS2D01G050000 chr2A 94.022 184 9 1 1 184 19470465 19470646 7.120000e-71 278.0
7 TraesCS2D01G050000 chr2A 92.614 176 11 1 156 331 19471659 19471832 4.320000e-63 252.0
8 TraesCS2D01G050000 chr2A 93.293 164 3 4 2451 2612 19479311 19479468 4.350000e-58 235.0
9 TraesCS2D01G050000 chr3D 79.327 1040 163 35 569 1587 7022975 7021967 0.000000e+00 682.0
10 TraesCS2D01G050000 chr3D 82.740 365 45 9 229 587 7023348 7022996 2.520000e-80 309.0
11 TraesCS2D01G050000 chr3A 79.973 749 115 21 584 1318 13363762 13364489 1.070000e-143 520.0
12 TraesCS2D01G050000 chr7B 84.000 350 50 4 238 587 712766774 712767117 5.390000e-87 331.0
13 TraesCS2D01G050000 chr7B 81.707 82 13 2 2260 2341 122844328 122844249 1.680000e-07 67.6
14 TraesCS2D01G050000 chr1D 74.294 673 137 26 930 1587 476248842 476248191 4.320000e-63 252.0
15 TraesCS2D01G050000 chr1D 90.789 76 7 0 2269 2344 107157165 107157240 4.600000e-18 102.0
16 TraesCS2D01G050000 chr3B 82.143 280 37 7 936 1215 8522193 8521927 7.270000e-56 228.0
17 TraesCS2D01G050000 chr3B 89.011 91 10 0 2260 2350 168508507 168508417 2.120000e-21 113.0
18 TraesCS2D01G050000 chr2B 83.824 204 22 4 1799 2000 30462124 30462318 1.600000e-42 183.0
19 TraesCS2D01G050000 chr5D 78.656 253 42 4 246 498 540079293 540079533 9.680000e-35 158.0
20 TraesCS2D01G050000 chr5D 79.275 193 35 2 316 505 542632243 542632053 2.110000e-26 130.0
21 TraesCS2D01G050000 chr5B 78.261 253 43 4 246 498 682398510 682398750 4.500000e-33 152.0
22 TraesCS2D01G050000 chr5B 86.022 93 13 0 2260 2352 544490507 544490415 1.650000e-17 100.0
23 TraesCS2D01G050000 chr4A 76.173 277 50 10 229 498 626385457 626385724 5.870000e-27 132.0
24 TraesCS2D01G050000 chr4A 85.057 87 12 1 2260 2346 614041677 614041762 1.290000e-13 87.9
25 TraesCS2D01G050000 chr4A 85.057 87 12 1 2260 2346 614062746 614062831 1.290000e-13 87.9
26 TraesCS2D01G050000 chr4A 85.057 87 12 1 2260 2346 614083658 614083743 1.290000e-13 87.9
27 TraesCS2D01G050000 chr6B 86.076 79 8 3 2269 2346 123309469 123309545 5.990000e-12 82.4
28 TraesCS2D01G050000 chr1B 80.645 93 10 5 2260 2346 387468562 387468652 6.030000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G050000 chr2D 18325429 18328040 2611 False 4824.0 4824 100.00000 1 2612 1 chr2D.!!$F2 2611
1 TraesCS2D01G050000 chr2A 19470465 19473063 2598 False 571.0 1382 93.87075 1 1578 4 chr2A.!!$F2 1577
2 TraesCS2D01G050000 chr2A 19478899 19479468 569 False 329.5 424 89.77900 1574 2612 2 chr2A.!!$F3 1038
3 TraesCS2D01G050000 chr3D 7021967 7023348 1381 True 495.5 682 81.03350 229 1587 2 chr3D.!!$R1 1358
4 TraesCS2D01G050000 chr3A 13363762 13364489 727 False 520.0 520 79.97300 584 1318 1 chr3A.!!$F1 734
5 TraesCS2D01G050000 chr1D 476248191 476248842 651 True 252.0 252 74.29400 930 1587 1 chr1D.!!$R1 657

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
724 1810 0.108186 TCTTCATCGCCATGTCGCTT 60.108 50.0 0.0 0.0 0.0 4.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2374 3506 0.03496 GGAGTTCCTTCCTTCCAGGC 60.035 60.0 0.0 0.0 34.61 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 94 4.320608 ACAAATGCACACCGAGAAAATT 57.679 36.364 0.00 0.00 0.00 1.82
144 145 7.500892 ACCGGCTATTCAAAACACATTCATATA 59.499 33.333 0.00 0.00 0.00 0.86
145 146 8.514594 CCGGCTATTCAAAACACATTCATATAT 58.485 33.333 0.00 0.00 0.00 0.86
169 170 0.754957 CCCAACCTGCAGTCAAACCA 60.755 55.000 13.81 0.00 0.00 3.67
184 185 6.650807 CAGTCAAACCATACACACAATCTACT 59.349 38.462 0.00 0.00 0.00 2.57
185 186 6.650807 AGTCAAACCATACACACAATCTACTG 59.349 38.462 0.00 0.00 0.00 2.74
210 1252 1.576421 CAAGTGAAAGAGGCCGTGC 59.424 57.895 0.00 0.00 0.00 5.34
212 1254 4.090057 GTGAAAGAGGCCGTGCGC 62.090 66.667 0.00 0.00 0.00 6.09
339 1384 2.911143 GACCTGACGCCATGGGAT 59.089 61.111 15.13 0.00 0.00 3.85
355 1400 1.638529 GGATCTCCGGATGATCACCT 58.361 55.000 29.20 8.96 41.35 4.00
365 1410 3.491619 CGGATGATCACCTTGGAGTACAG 60.492 52.174 0.00 0.00 0.00 2.74
480 1528 2.738938 GGGCCGGTTGTACCCCTAG 61.739 68.421 1.90 0.00 37.70 3.02
551 1599 1.228228 GCATTGCCATCTCCCTCCA 59.772 57.895 0.00 0.00 0.00 3.86
628 1714 1.107945 GGTCCTTCTTCCCTCTCGAG 58.892 60.000 5.93 5.93 0.00 4.04
688 1774 1.376424 CCTTGCCGTGCAGATCACT 60.376 57.895 0.00 0.00 43.46 3.41
724 1810 0.108186 TCTTCATCGCCATGTCGCTT 60.108 50.000 0.00 0.00 0.00 4.68
794 1880 0.532573 GTCCAAGATCAGCCGTCAGA 59.467 55.000 0.00 0.00 0.00 3.27
901 1994 3.512033 AGTTAGAGAACATCGTCAGCC 57.488 47.619 0.00 0.00 38.10 4.85
1005 2098 2.109126 GGCCAACGCAGAGATGTCC 61.109 63.158 0.00 0.00 36.38 4.02
1006 2099 1.375908 GCCAACGCAGAGATGTCCA 60.376 57.895 0.00 0.00 34.03 4.02
1007 2100 1.364626 GCCAACGCAGAGATGTCCAG 61.365 60.000 0.00 0.00 34.03 3.86
1008 2101 0.247460 CCAACGCAGAGATGTCCAGA 59.753 55.000 0.00 0.00 0.00 3.86
1009 2102 1.134580 CCAACGCAGAGATGTCCAGAT 60.135 52.381 0.00 0.00 0.00 2.90
1010 2103 2.200067 CAACGCAGAGATGTCCAGATC 58.800 52.381 0.00 0.00 0.00 2.75
1011 2104 1.774110 ACGCAGAGATGTCCAGATCT 58.226 50.000 0.00 0.00 35.27 2.75
1012 2105 1.408340 ACGCAGAGATGTCCAGATCTG 59.592 52.381 16.24 16.24 41.68 2.90
1023 2116 1.680522 CCAGATCTGGTAGCGGCAGT 61.681 60.000 30.55 0.00 45.53 4.40
1028 2121 3.899981 CTGGTAGCGGCAGTGGCAA 62.900 63.158 17.80 0.00 43.71 4.52
1062 2155 3.900862 TTGCAGGCCCTCCTTGCA 61.901 61.111 12.26 12.26 41.93 4.08
1129 2230 2.181021 GGACAGTGTACGCCCTCG 59.819 66.667 1.98 0.00 42.43 4.63
1174 2275 0.542467 TGGCTTACCGGTGGACTACA 60.542 55.000 19.93 5.87 39.70 2.74
1233 2337 4.149473 CGCCGACGAGATCCTAAAAGGA 62.149 54.545 0.00 0.00 45.99 3.36
1267 2371 3.556004 GGCTGCATCCCTACTGAATAGAC 60.556 52.174 0.50 0.00 31.83 2.59
1274 2378 3.012502 TCCCTACTGAATAGACTGGTGGT 59.987 47.826 0.00 0.00 31.83 4.16
1616 2723 4.034510 GCTTGACCGATCATGTTAAGAAGG 59.965 45.833 16.46 0.00 32.70 3.46
1628 2735 7.254852 TCATGTTAAGAAGGTGTTGTGTTTTC 58.745 34.615 0.00 0.00 0.00 2.29
1657 2764 1.610522 AGTGAATGGTGTGCTTTCTGC 59.389 47.619 0.00 0.00 43.25 4.26
1709 2816 9.321562 CTGCAAGCTAAAATGGAAATGATTATT 57.678 29.630 0.00 0.00 0.00 1.40
1722 2829 8.498575 TGGAAATGATTATTACCATGTACTCCA 58.501 33.333 0.00 0.00 0.00 3.86
1728 2835 9.374711 TGATTATTACCATGTACTCCATCTGTA 57.625 33.333 0.00 0.00 0.00 2.74
1816 2948 5.010719 TCGTTTAGTTCATGAGTCAGGACTT 59.989 40.000 7.06 1.33 42.66 3.01
1856 2988 7.708752 CCTTTGTTATTTGTTTGCCAGACTTTA 59.291 33.333 0.00 0.00 0.00 1.85
1888 3020 1.768275 TCGGACCTCATGGCATGTATT 59.232 47.619 25.62 11.63 36.63 1.89
1900 3032 6.487668 TCATGGCATGTATTCAAGTTATGAGG 59.512 38.462 25.62 0.00 39.77 3.86
1901 3033 4.580167 TGGCATGTATTCAAGTTATGAGGC 59.420 41.667 0.00 0.00 39.77 4.70
1909 3041 8.374743 TGTATTCAAGTTATGAGGCATATAGCA 58.625 33.333 0.00 0.00 40.59 3.49
1959 3091 4.495422 GGATCTTATGGTAGGTACGCATG 58.505 47.826 0.00 0.00 0.00 4.06
1981 3113 8.282124 CATGCATGCTAAGAAGATTAATTGTG 57.718 34.615 20.33 0.00 0.00 3.33
1982 3114 6.267817 TGCATGCTAAGAAGATTAATTGTGC 58.732 36.000 20.33 0.00 0.00 4.57
1983 3115 6.127675 TGCATGCTAAGAAGATTAATTGTGCA 60.128 34.615 20.33 0.00 34.42 4.57
1984 3116 6.753279 GCATGCTAAGAAGATTAATTGTGCAA 59.247 34.615 11.37 0.00 0.00 4.08
1985 3117 7.043590 GCATGCTAAGAAGATTAATTGTGCAAG 60.044 37.037 11.37 0.00 0.00 4.01
1986 3118 7.686438 TGCTAAGAAGATTAATTGTGCAAGA 57.314 32.000 0.00 0.00 0.00 3.02
1987 3119 8.109705 TGCTAAGAAGATTAATTGTGCAAGAA 57.890 30.769 0.00 0.00 0.00 2.52
1988 3120 8.575589 TGCTAAGAAGATTAATTGTGCAAGAAA 58.424 29.630 0.00 0.00 0.00 2.52
1989 3121 9.578439 GCTAAGAAGATTAATTGTGCAAGAAAT 57.422 29.630 0.00 0.00 0.00 2.17
1992 3124 9.768662 AAGAAGATTAATTGTGCAAGAAATTGT 57.231 25.926 11.56 3.30 0.00 2.71
1993 3125 9.415544 AGAAGATTAATTGTGCAAGAAATTGTC 57.584 29.630 11.56 9.79 0.00 3.18
1994 3126 9.415544 GAAGATTAATTGTGCAAGAAATTGTCT 57.584 29.630 11.56 11.24 38.69 3.41
1996 3128 9.768662 AGATTAATTGTGCAAGAAATTGTCTTT 57.231 25.926 11.56 0.00 44.64 2.52
1997 3129 9.801714 GATTAATTGTGCAAGAAATTGTCTTTG 57.198 29.630 11.56 0.00 44.64 2.77
1998 3130 5.662211 ATTGTGCAAGAAATTGTCTTTGC 57.338 34.783 0.00 8.62 44.64 3.68
1999 3131 4.120792 TGTGCAAGAAATTGTCTTTGCA 57.879 36.364 12.36 12.36 44.64 4.08
2000 3132 4.695396 TGTGCAAGAAATTGTCTTTGCAT 58.305 34.783 16.83 0.00 44.64 3.96
2001 3133 4.508492 TGTGCAAGAAATTGTCTTTGCATG 59.492 37.500 16.83 0.00 44.64 4.06
2002 3134 4.746115 GTGCAAGAAATTGTCTTTGCATGA 59.254 37.500 16.83 0.00 44.64 3.07
2003 3135 5.407387 GTGCAAGAAATTGTCTTTGCATGAT 59.593 36.000 16.83 0.00 44.64 2.45
2004 3136 5.407084 TGCAAGAAATTGTCTTTGCATGATG 59.593 36.000 12.36 0.00 44.64 3.07
2005 3137 5.407387 GCAAGAAATTGTCTTTGCATGATGT 59.593 36.000 0.00 0.00 44.64 3.06
2006 3138 6.400727 GCAAGAAATTGTCTTTGCATGATGTC 60.401 38.462 0.00 0.00 44.64 3.06
2007 3139 6.335471 AGAAATTGTCTTTGCATGATGTCA 57.665 33.333 0.00 0.00 29.66 3.58
2008 3140 6.931838 AGAAATTGTCTTTGCATGATGTCAT 58.068 32.000 0.00 0.00 32.00 3.06
2009 3141 7.383687 AGAAATTGTCTTTGCATGATGTCATT 58.616 30.769 0.00 0.00 30.06 2.57
2010 3142 7.876068 AGAAATTGTCTTTGCATGATGTCATTT 59.124 29.630 0.00 0.00 30.06 2.32
2011 3143 6.961359 ATTGTCTTTGCATGATGTCATTTG 57.039 33.333 0.00 0.00 33.61 2.32
2012 3144 5.708877 TGTCTTTGCATGATGTCATTTGA 57.291 34.783 0.00 0.00 33.61 2.69
2013 3145 5.463286 TGTCTTTGCATGATGTCATTTGAC 58.537 37.500 0.00 3.72 44.97 3.18
2029 3161 8.659569 GTCATTTGACAACACATACTGTATTG 57.340 34.615 5.84 3.54 40.37 1.90
2031 3163 9.495572 TCATTTGACAACACATACTGTATTGTA 57.504 29.630 4.08 0.00 46.64 2.41
2039 3171 9.261318 CAACACATACTGTATTGTAAAATGTCG 57.739 33.333 12.64 0.00 30.68 4.35
2040 3172 8.766000 ACACATACTGTATTGTAAAATGTCGA 57.234 30.769 11.37 0.00 0.00 4.20
2041 3173 8.869897 ACACATACTGTATTGTAAAATGTCGAG 58.130 33.333 11.37 0.00 0.00 4.04
2042 3174 9.083080 CACATACTGTATTGTAAAATGTCGAGA 57.917 33.333 0.00 0.00 0.00 4.04
2043 3175 9.647797 ACATACTGTATTGTAAAATGTCGAGAA 57.352 29.630 0.00 0.00 0.00 2.87
2052 3184 9.853555 ATTGTAAAATGTCGAGAATTAAATGCA 57.146 25.926 0.00 0.00 0.00 3.96
2053 3185 8.894409 TGTAAAATGTCGAGAATTAAATGCAG 57.106 30.769 0.00 0.00 0.00 4.41
2054 3186 8.511321 TGTAAAATGTCGAGAATTAAATGCAGT 58.489 29.630 0.00 0.00 0.00 4.40
2055 3187 9.000018 GTAAAATGTCGAGAATTAAATGCAGTC 58.000 33.333 0.00 0.00 0.00 3.51
2056 3188 5.741388 ATGTCGAGAATTAAATGCAGTCC 57.259 39.130 0.00 0.00 0.00 3.85
2057 3189 4.574892 TGTCGAGAATTAAATGCAGTCCA 58.425 39.130 0.00 0.00 0.00 4.02
2058 3190 4.631377 TGTCGAGAATTAAATGCAGTCCAG 59.369 41.667 0.00 0.00 0.00 3.86
2059 3191 4.870426 GTCGAGAATTAAATGCAGTCCAGA 59.130 41.667 0.00 0.00 0.00 3.86
2060 3192 5.525378 GTCGAGAATTAAATGCAGTCCAGAT 59.475 40.000 0.00 0.00 0.00 2.90
2061 3193 6.037610 GTCGAGAATTAAATGCAGTCCAGATT 59.962 38.462 0.00 0.00 0.00 2.40
2062 3194 7.224753 GTCGAGAATTAAATGCAGTCCAGATTA 59.775 37.037 0.00 0.00 0.00 1.75
2063 3195 7.439356 TCGAGAATTAAATGCAGTCCAGATTAG 59.561 37.037 0.00 0.00 0.00 1.73
2064 3196 7.225538 CGAGAATTAAATGCAGTCCAGATTAGT 59.774 37.037 0.00 0.00 0.00 2.24
2065 3197 8.218338 AGAATTAAATGCAGTCCAGATTAGTG 57.782 34.615 0.00 0.00 0.00 2.74
2066 3198 8.049117 AGAATTAAATGCAGTCCAGATTAGTGA 58.951 33.333 0.00 0.00 0.00 3.41
2067 3199 7.798596 ATTAAATGCAGTCCAGATTAGTGAG 57.201 36.000 0.00 0.00 0.00 3.51
2068 3200 3.834489 ATGCAGTCCAGATTAGTGAGG 57.166 47.619 0.00 0.00 0.00 3.86
2069 3201 1.208052 TGCAGTCCAGATTAGTGAGGC 59.792 52.381 0.00 0.00 0.00 4.70
2070 3202 1.484240 GCAGTCCAGATTAGTGAGGCT 59.516 52.381 0.00 0.00 0.00 4.58
2071 3203 2.695666 GCAGTCCAGATTAGTGAGGCTA 59.304 50.000 0.00 0.00 0.00 3.93
2072 3204 3.243704 GCAGTCCAGATTAGTGAGGCTAG 60.244 52.174 0.00 0.00 0.00 3.42
2073 3205 3.320541 CAGTCCAGATTAGTGAGGCTAGG 59.679 52.174 0.00 0.00 0.00 3.02
2074 3206 3.052490 AGTCCAGATTAGTGAGGCTAGGT 60.052 47.826 0.00 0.00 0.00 3.08
2075 3207 3.707102 GTCCAGATTAGTGAGGCTAGGTT 59.293 47.826 0.00 0.00 0.00 3.50
2076 3208 3.961408 TCCAGATTAGTGAGGCTAGGTTC 59.039 47.826 0.00 0.00 0.00 3.62
2077 3209 3.964031 CCAGATTAGTGAGGCTAGGTTCT 59.036 47.826 0.00 0.00 0.00 3.01
2078 3210 4.407296 CCAGATTAGTGAGGCTAGGTTCTT 59.593 45.833 0.00 0.00 0.00 2.52
2079 3211 5.355596 CAGATTAGTGAGGCTAGGTTCTTG 58.644 45.833 0.00 0.00 0.00 3.02
2080 3212 4.407296 AGATTAGTGAGGCTAGGTTCTTGG 59.593 45.833 0.00 0.00 0.00 3.61
2081 3213 2.031495 AGTGAGGCTAGGTTCTTGGT 57.969 50.000 0.00 0.00 0.00 3.67
2082 3214 1.903183 AGTGAGGCTAGGTTCTTGGTC 59.097 52.381 0.00 0.00 0.00 4.02
2083 3215 1.623811 GTGAGGCTAGGTTCTTGGTCA 59.376 52.381 0.00 0.00 0.00 4.02
2084 3216 2.038557 GTGAGGCTAGGTTCTTGGTCAA 59.961 50.000 0.00 0.00 0.00 3.18
2085 3217 2.038557 TGAGGCTAGGTTCTTGGTCAAC 59.961 50.000 0.00 0.00 0.00 3.18
2086 3218 1.002087 AGGCTAGGTTCTTGGTCAACG 59.998 52.381 0.00 0.00 0.00 4.10
2087 3219 1.001633 GGCTAGGTTCTTGGTCAACGA 59.998 52.381 0.00 0.00 0.00 3.85
2088 3220 2.354805 GGCTAGGTTCTTGGTCAACGAT 60.355 50.000 0.00 0.00 0.00 3.73
2089 3221 3.335579 GCTAGGTTCTTGGTCAACGATT 58.664 45.455 0.00 0.00 0.00 3.34
2090 3222 3.751698 GCTAGGTTCTTGGTCAACGATTT 59.248 43.478 0.00 0.00 0.00 2.17
2091 3223 4.215613 GCTAGGTTCTTGGTCAACGATTTT 59.784 41.667 0.00 0.00 0.00 1.82
2092 3224 5.410439 GCTAGGTTCTTGGTCAACGATTTTA 59.590 40.000 0.00 0.00 0.00 1.52
2093 3225 6.093633 GCTAGGTTCTTGGTCAACGATTTTAT 59.906 38.462 0.00 0.00 0.00 1.40
2094 3226 6.496338 AGGTTCTTGGTCAACGATTTTATC 57.504 37.500 0.00 0.00 0.00 1.75
2095 3227 6.001460 AGGTTCTTGGTCAACGATTTTATCA 58.999 36.000 0.00 0.00 0.00 2.15
2096 3228 6.659242 AGGTTCTTGGTCAACGATTTTATCAT 59.341 34.615 0.00 0.00 0.00 2.45
2097 3229 7.176690 AGGTTCTTGGTCAACGATTTTATCATT 59.823 33.333 0.00 0.00 0.00 2.57
2098 3230 7.812669 GGTTCTTGGTCAACGATTTTATCATTT 59.187 33.333 0.00 0.00 0.00 2.32
2099 3231 9.191995 GTTCTTGGTCAACGATTTTATCATTTT 57.808 29.630 0.00 0.00 0.00 1.82
2100 3232 8.964420 TCTTGGTCAACGATTTTATCATTTTC 57.036 30.769 0.00 0.00 0.00 2.29
2101 3233 8.026607 TCTTGGTCAACGATTTTATCATTTTCC 58.973 33.333 0.00 0.00 0.00 3.13
2102 3234 7.461182 TGGTCAACGATTTTATCATTTTCCT 57.539 32.000 0.00 0.00 0.00 3.36
2103 3235 7.891561 TGGTCAACGATTTTATCATTTTCCTT 58.108 30.769 0.00 0.00 0.00 3.36
2104 3236 9.015367 TGGTCAACGATTTTATCATTTTCCTTA 57.985 29.630 0.00 0.00 0.00 2.69
2105 3237 9.849166 GGTCAACGATTTTATCATTTTCCTTAA 57.151 29.630 0.00 0.00 0.00 1.85
2123 3255 9.985730 TTTCCTTAAGAGAAGTATTAACGTTGA 57.014 29.630 11.99 2.22 0.00 3.18
2125 3257 9.582431 TCCTTAAGAGAAGTATTAACGTTGATG 57.418 33.333 15.22 0.00 0.00 3.07
2126 3258 9.367444 CCTTAAGAGAAGTATTAACGTTGATGT 57.633 33.333 15.22 0.33 0.00 3.06
2129 3261 7.061752 AGAGAAGTATTAACGTTGATGTTGC 57.938 36.000 15.22 2.74 33.32 4.17
2130 3262 6.092259 AGAGAAGTATTAACGTTGATGTTGCC 59.908 38.462 15.22 2.00 33.32 4.52
2131 3263 4.957759 AGTATTAACGTTGATGTTGCCC 57.042 40.909 15.22 0.00 33.32 5.36
2132 3264 4.585879 AGTATTAACGTTGATGTTGCCCT 58.414 39.130 15.22 0.06 33.32 5.19
2133 3265 5.736813 AGTATTAACGTTGATGTTGCCCTA 58.263 37.500 15.22 0.00 33.32 3.53
2134 3266 6.174760 AGTATTAACGTTGATGTTGCCCTAA 58.825 36.000 15.22 0.00 33.32 2.69
2135 3267 6.826741 AGTATTAACGTTGATGTTGCCCTAAT 59.173 34.615 15.22 3.20 33.32 1.73
2136 3268 3.848272 AACGTTGATGTTGCCCTAATG 57.152 42.857 0.00 0.00 0.00 1.90
2137 3269 1.472480 ACGTTGATGTTGCCCTAATGC 59.528 47.619 0.00 0.00 0.00 3.56
2138 3270 1.745087 CGTTGATGTTGCCCTAATGCT 59.255 47.619 0.00 0.00 0.00 3.79
2139 3271 2.478370 CGTTGATGTTGCCCTAATGCTG 60.478 50.000 0.00 0.00 0.00 4.41
2140 3272 2.493278 GTTGATGTTGCCCTAATGCTGT 59.507 45.455 0.00 0.00 0.00 4.40
2141 3273 3.643199 TGATGTTGCCCTAATGCTGTA 57.357 42.857 0.00 0.00 0.00 2.74
2142 3274 4.169059 TGATGTTGCCCTAATGCTGTAT 57.831 40.909 0.00 0.00 0.00 2.29
2143 3275 4.535781 TGATGTTGCCCTAATGCTGTATT 58.464 39.130 0.00 0.00 0.00 1.89
2144 3276 4.338964 TGATGTTGCCCTAATGCTGTATTG 59.661 41.667 0.97 0.00 0.00 1.90
2145 3277 3.696045 TGTTGCCCTAATGCTGTATTGT 58.304 40.909 0.97 0.00 0.00 2.71
2146 3278 3.694072 TGTTGCCCTAATGCTGTATTGTC 59.306 43.478 0.97 0.00 0.00 3.18
2147 3279 2.930950 TGCCCTAATGCTGTATTGTCC 58.069 47.619 0.97 0.00 0.00 4.02
2148 3280 1.873591 GCCCTAATGCTGTATTGTCCG 59.126 52.381 0.97 0.00 0.00 4.79
2149 3281 2.484770 GCCCTAATGCTGTATTGTCCGA 60.485 50.000 0.97 0.00 0.00 4.55
2150 3282 3.393800 CCCTAATGCTGTATTGTCCGAG 58.606 50.000 0.97 0.00 0.00 4.63
2151 3283 3.069586 CCCTAATGCTGTATTGTCCGAGA 59.930 47.826 0.97 0.00 0.00 4.04
2152 3284 4.442893 CCCTAATGCTGTATTGTCCGAGAA 60.443 45.833 0.97 0.00 0.00 2.87
2153 3285 5.300752 CCTAATGCTGTATTGTCCGAGAAT 58.699 41.667 0.97 0.00 0.00 2.40
2154 3286 5.760253 CCTAATGCTGTATTGTCCGAGAATT 59.240 40.000 0.97 0.00 0.00 2.17
2155 3287 5.490139 AATGCTGTATTGTCCGAGAATTG 57.510 39.130 0.00 0.00 0.00 2.32
2156 3288 3.937814 TGCTGTATTGTCCGAGAATTGT 58.062 40.909 0.00 0.00 0.00 2.71
2157 3289 3.932710 TGCTGTATTGTCCGAGAATTGTC 59.067 43.478 0.00 0.00 0.00 3.18
2158 3290 4.184629 GCTGTATTGTCCGAGAATTGTCT 58.815 43.478 0.66 0.00 36.55 3.41
2159 3291 4.631813 GCTGTATTGTCCGAGAATTGTCTT 59.368 41.667 0.66 0.00 32.80 3.01
2160 3292 5.122396 GCTGTATTGTCCGAGAATTGTCTTT 59.878 40.000 0.66 0.00 32.80 2.52
2161 3293 6.673316 GCTGTATTGTCCGAGAATTGTCTTTC 60.673 42.308 0.66 0.00 32.80 2.62
2162 3294 4.928661 ATTGTCCGAGAATTGTCTTTCG 57.071 40.909 0.66 0.00 32.80 3.46
2163 3295 3.653539 TGTCCGAGAATTGTCTTTCGA 57.346 42.857 0.66 0.00 32.80 3.71
2164 3296 3.575630 TGTCCGAGAATTGTCTTTCGAG 58.424 45.455 0.66 0.00 32.80 4.04
2165 3297 2.924290 GTCCGAGAATTGTCTTTCGAGG 59.076 50.000 0.66 0.00 32.80 4.63
2166 3298 2.094182 TCCGAGAATTGTCTTTCGAGGG 60.094 50.000 0.66 0.00 32.80 4.30
2167 3299 2.271800 CGAGAATTGTCTTTCGAGGGG 58.728 52.381 0.66 0.00 32.80 4.79
2168 3300 2.353803 CGAGAATTGTCTTTCGAGGGGT 60.354 50.000 0.66 0.00 32.80 4.95
2169 3301 3.119245 CGAGAATTGTCTTTCGAGGGGTA 60.119 47.826 0.66 0.00 32.80 3.69
2170 3302 4.434520 GAGAATTGTCTTTCGAGGGGTAG 58.565 47.826 0.00 0.00 32.80 3.18
2171 3303 4.094476 AGAATTGTCTTTCGAGGGGTAGA 58.906 43.478 0.00 0.00 0.00 2.59
2172 3304 4.530946 AGAATTGTCTTTCGAGGGGTAGAA 59.469 41.667 0.00 0.00 0.00 2.10
2173 3305 4.903045 ATTGTCTTTCGAGGGGTAGAAA 57.097 40.909 0.00 0.00 35.39 2.52
2174 3306 4.693042 TTGTCTTTCGAGGGGTAGAAAA 57.307 40.909 0.00 0.00 36.14 2.29
2175 3307 3.999046 TGTCTTTCGAGGGGTAGAAAAC 58.001 45.455 0.00 0.00 36.14 2.43
2176 3308 3.388676 TGTCTTTCGAGGGGTAGAAAACA 59.611 43.478 0.00 0.00 36.14 2.83
2177 3309 4.041198 TGTCTTTCGAGGGGTAGAAAACAT 59.959 41.667 0.00 0.00 36.14 2.71
2178 3310 5.001874 GTCTTTCGAGGGGTAGAAAACATT 58.998 41.667 0.00 0.00 36.14 2.71
2179 3311 5.472478 GTCTTTCGAGGGGTAGAAAACATTT 59.528 40.000 0.00 0.00 36.14 2.32
2180 3312 5.704053 TCTTTCGAGGGGTAGAAAACATTTC 59.296 40.000 0.00 0.00 36.14 2.17
2181 3313 3.946606 TCGAGGGGTAGAAAACATTTCC 58.053 45.455 0.00 0.00 0.00 3.13
2182 3314 3.328343 TCGAGGGGTAGAAAACATTTCCA 59.672 43.478 0.00 0.00 0.00 3.53
2183 3315 4.018779 TCGAGGGGTAGAAAACATTTCCAT 60.019 41.667 0.00 0.00 0.00 3.41
2184 3316 4.705023 CGAGGGGTAGAAAACATTTCCATT 59.295 41.667 0.00 0.00 0.00 3.16
2185 3317 5.185056 CGAGGGGTAGAAAACATTTCCATTT 59.815 40.000 0.00 0.00 0.00 2.32
2186 3318 6.295067 CGAGGGGTAGAAAACATTTCCATTTT 60.295 38.462 0.00 0.00 0.00 1.82
2187 3319 7.387265 AGGGGTAGAAAACATTTCCATTTTT 57.613 32.000 0.00 0.00 0.00 1.94
2188 3320 7.450074 AGGGGTAGAAAACATTTCCATTTTTC 58.550 34.615 0.00 0.00 38.82 2.29
2189 3321 7.292356 AGGGGTAGAAAACATTTCCATTTTTCT 59.708 33.333 11.95 11.95 46.40 2.52
2190 3322 7.387673 GGGGTAGAAAACATTTCCATTTTTCTG 59.612 37.037 15.49 0.00 45.07 3.02
2191 3323 8.147704 GGGTAGAAAACATTTCCATTTTTCTGA 58.852 33.333 15.49 1.93 45.07 3.27
2192 3324 8.978539 GGTAGAAAACATTTCCATTTTTCTGAC 58.021 33.333 15.49 10.59 45.07 3.51
2193 3325 9.528018 GTAGAAAACATTTCCATTTTTCTGACA 57.472 29.630 15.49 0.00 45.07 3.58
2195 3327 9.048446 AGAAAACATTTCCATTTTTCTGACATG 57.952 29.630 7.55 0.00 44.24 3.21
2196 3328 8.735692 AAAACATTTCCATTTTTCTGACATGT 57.264 26.923 0.00 0.00 0.00 3.21
2197 3329 8.735692 AAACATTTCCATTTTTCTGACATGTT 57.264 26.923 0.00 0.00 34.57 2.71
2198 3330 8.735692 AACATTTCCATTTTTCTGACATGTTT 57.264 26.923 0.00 0.00 30.04 2.83
2199 3331 9.829507 AACATTTCCATTTTTCTGACATGTTTA 57.170 25.926 0.00 0.00 30.04 2.01
2200 3332 9.829507 ACATTTCCATTTTTCTGACATGTTTAA 57.170 25.926 0.00 0.00 0.00 1.52
2204 3336 9.658799 TTCCATTTTTCTGACATGTTTAAAACA 57.341 25.926 0.00 0.00 46.94 2.83
2205 3337 9.092876 TCCATTTTTCTGACATGTTTAAAACAC 57.907 29.630 0.00 0.00 45.50 3.32
2206 3338 9.097257 CCATTTTTCTGACATGTTTAAAACACT 57.903 29.630 0.00 0.00 45.50 3.55
2210 3342 9.698309 TTTTCTGACATGTTTAAAACACTTTCA 57.302 25.926 0.00 0.00 45.50 2.69
2211 3343 8.909708 TTCTGACATGTTTAAAACACTTTCAG 57.090 30.769 0.00 2.42 45.50 3.02
2212 3344 6.972328 TCTGACATGTTTAAAACACTTTCAGC 59.028 34.615 0.00 0.00 45.50 4.26
2213 3345 6.862209 TGACATGTTTAAAACACTTTCAGCT 58.138 32.000 0.00 0.00 45.50 4.24
2214 3346 6.972328 TGACATGTTTAAAACACTTTCAGCTC 59.028 34.615 0.00 0.00 45.50 4.09
2215 3347 7.100458 ACATGTTTAAAACACTTTCAGCTCT 57.900 32.000 0.00 0.00 45.50 4.09
2216 3348 8.220755 ACATGTTTAAAACACTTTCAGCTCTA 57.779 30.769 0.00 0.00 45.50 2.43
2217 3349 8.345565 ACATGTTTAAAACACTTTCAGCTCTAG 58.654 33.333 0.00 0.00 45.50 2.43
2218 3350 7.259290 TGTTTAAAACACTTTCAGCTCTAGG 57.741 36.000 0.00 0.00 36.25 3.02
2219 3351 7.051623 TGTTTAAAACACTTTCAGCTCTAGGA 58.948 34.615 0.00 0.00 36.25 2.94
2220 3352 7.719633 TGTTTAAAACACTTTCAGCTCTAGGAT 59.280 33.333 0.00 0.00 36.25 3.24
2221 3353 7.907214 TTAAAACACTTTCAGCTCTAGGATC 57.093 36.000 0.00 0.00 0.00 3.36
2222 3354 3.791973 ACACTTTCAGCTCTAGGATCG 57.208 47.619 0.00 0.00 0.00 3.69
2223 3355 2.428890 ACACTTTCAGCTCTAGGATCGG 59.571 50.000 0.00 0.00 0.00 4.18
2224 3356 2.035632 ACTTTCAGCTCTAGGATCGGG 58.964 52.381 0.00 0.00 0.00 5.14
2225 3357 1.342819 CTTTCAGCTCTAGGATCGGGG 59.657 57.143 0.00 0.00 0.00 5.73
2226 3358 0.261991 TTCAGCTCTAGGATCGGGGT 59.738 55.000 0.00 0.00 0.00 4.95
2227 3359 0.261991 TCAGCTCTAGGATCGGGGTT 59.738 55.000 0.00 0.00 0.00 4.11
2228 3360 1.497716 TCAGCTCTAGGATCGGGGTTA 59.502 52.381 0.00 0.00 0.00 2.85
2229 3361 1.614413 CAGCTCTAGGATCGGGGTTAC 59.386 57.143 0.00 0.00 0.00 2.50
2230 3362 1.217183 AGCTCTAGGATCGGGGTTACA 59.783 52.381 0.00 0.00 0.00 2.41
2231 3363 2.158295 AGCTCTAGGATCGGGGTTACAT 60.158 50.000 0.00 0.00 0.00 2.29
2232 3364 2.633481 GCTCTAGGATCGGGGTTACATT 59.367 50.000 0.00 0.00 0.00 2.71
2233 3365 3.306156 GCTCTAGGATCGGGGTTACATTC 60.306 52.174 0.00 0.00 0.00 2.67
2234 3366 4.153411 CTCTAGGATCGGGGTTACATTCT 58.847 47.826 0.00 0.00 0.00 2.40
2235 3367 4.553678 TCTAGGATCGGGGTTACATTCTT 58.446 43.478 0.00 0.00 0.00 2.52
2236 3368 4.966805 TCTAGGATCGGGGTTACATTCTTT 59.033 41.667 0.00 0.00 0.00 2.52
2237 3369 4.586306 AGGATCGGGGTTACATTCTTTT 57.414 40.909 0.00 0.00 0.00 2.27
2238 3370 4.270008 AGGATCGGGGTTACATTCTTTTG 58.730 43.478 0.00 0.00 0.00 2.44
2239 3371 3.181490 GGATCGGGGTTACATTCTTTTGC 60.181 47.826 0.00 0.00 0.00 3.68
2240 3372 2.865079 TCGGGGTTACATTCTTTTGCA 58.135 42.857 0.00 0.00 0.00 4.08
2241 3373 3.426615 TCGGGGTTACATTCTTTTGCAT 58.573 40.909 0.00 0.00 0.00 3.96
2242 3374 3.442273 TCGGGGTTACATTCTTTTGCATC 59.558 43.478 0.00 0.00 0.00 3.91
2243 3375 3.443681 CGGGGTTACATTCTTTTGCATCT 59.556 43.478 0.00 0.00 0.00 2.90
2244 3376 4.638421 CGGGGTTACATTCTTTTGCATCTA 59.362 41.667 0.00 0.00 0.00 1.98
2245 3377 5.448632 CGGGGTTACATTCTTTTGCATCTAC 60.449 44.000 0.00 0.00 0.00 2.59
2246 3378 5.652452 GGGGTTACATTCTTTTGCATCTACT 59.348 40.000 0.00 0.00 0.00 2.57
2247 3379 6.183360 GGGGTTACATTCTTTTGCATCTACTC 60.183 42.308 0.00 0.00 0.00 2.59
2248 3380 6.183360 GGGTTACATTCTTTTGCATCTACTCC 60.183 42.308 0.00 0.00 0.00 3.85
2249 3381 6.374333 GGTTACATTCTTTTGCATCTACTCCA 59.626 38.462 0.00 0.00 0.00 3.86
2250 3382 7.067494 GGTTACATTCTTTTGCATCTACTCCAT 59.933 37.037 0.00 0.00 0.00 3.41
2251 3383 8.462016 GTTACATTCTTTTGCATCTACTCCATT 58.538 33.333 0.00 0.00 0.00 3.16
2252 3384 7.093322 ACATTCTTTTGCATCTACTCCATTC 57.907 36.000 0.00 0.00 0.00 2.67
2253 3385 6.096001 ACATTCTTTTGCATCTACTCCATTCC 59.904 38.462 0.00 0.00 0.00 3.01
2254 3386 5.441718 TCTTTTGCATCTACTCCATTCCT 57.558 39.130 0.00 0.00 0.00 3.36
2255 3387 5.819991 TCTTTTGCATCTACTCCATTCCTT 58.180 37.500 0.00 0.00 0.00 3.36
2256 3388 5.882557 TCTTTTGCATCTACTCCATTCCTTC 59.117 40.000 0.00 0.00 0.00 3.46
2257 3389 3.845781 TGCATCTACTCCATTCCTTCC 57.154 47.619 0.00 0.00 0.00 3.46
2258 3390 3.387962 TGCATCTACTCCATTCCTTCCT 58.612 45.455 0.00 0.00 0.00 3.36
2259 3391 4.556697 TGCATCTACTCCATTCCTTCCTA 58.443 43.478 0.00 0.00 0.00 2.94
2260 3392 4.968719 TGCATCTACTCCATTCCTTCCTAA 59.031 41.667 0.00 0.00 0.00 2.69
2261 3393 5.428457 TGCATCTACTCCATTCCTTCCTAAA 59.572 40.000 0.00 0.00 0.00 1.85
2262 3394 6.101734 TGCATCTACTCCATTCCTTCCTAAAT 59.898 38.462 0.00 0.00 0.00 1.40
2263 3395 7.292356 TGCATCTACTCCATTCCTTCCTAAATA 59.708 37.037 0.00 0.00 0.00 1.40
2264 3396 8.325046 GCATCTACTCCATTCCTTCCTAAATAT 58.675 37.037 0.00 0.00 0.00 1.28
2270 3402 9.225682 ACTCCATTCCTTCCTAAATATAAGTGA 57.774 33.333 0.00 0.00 0.00 3.41
2290 3422 7.710676 AGTGAATCTACACTCTGAACTATGT 57.289 36.000 0.00 0.00 46.36 2.29
2291 3423 7.767261 AGTGAATCTACACTCTGAACTATGTC 58.233 38.462 0.00 0.00 46.36 3.06
2292 3424 7.613801 AGTGAATCTACACTCTGAACTATGTCT 59.386 37.037 0.00 0.00 46.36 3.41
2293 3425 8.894731 GTGAATCTACACTCTGAACTATGTCTA 58.105 37.037 0.00 0.00 37.73 2.59
2294 3426 9.634021 TGAATCTACACTCTGAACTATGTCTAT 57.366 33.333 0.00 0.00 0.00 1.98
2354 3486 9.826574 AGAAATACTTATATTTAGACACGGCAA 57.173 29.630 0.00 0.00 40.42 4.52
2356 3488 8.603242 AATACTTATATTTAGACACGGCAAGG 57.397 34.615 0.00 0.00 0.00 3.61
2357 3489 4.814771 ACTTATATTTAGACACGGCAAGGC 59.185 41.667 0.00 0.00 0.00 4.35
2358 3490 2.032680 TATTTAGACACGGCAAGGCC 57.967 50.000 0.00 0.00 46.75 5.19
2370 3502 0.813821 GCAAGGCCAATCTTCTCACC 59.186 55.000 5.01 0.00 0.00 4.02
2371 3503 1.089920 CAAGGCCAATCTTCTCACCG 58.910 55.000 5.01 0.00 0.00 4.94
2372 3504 0.035056 AAGGCCAATCTTCTCACCGG 60.035 55.000 5.01 0.00 0.00 5.28
2373 3505 2.115291 GGCCAATCTTCTCACCGGC 61.115 63.158 0.00 0.00 38.85 6.13
2374 3506 2.464459 GCCAATCTTCTCACCGGCG 61.464 63.158 0.00 0.00 0.00 6.46
2375 3507 2.464459 CCAATCTTCTCACCGGCGC 61.464 63.158 0.00 0.00 0.00 6.53
2376 3508 2.125106 AATCTTCTCACCGGCGCC 60.125 61.111 19.07 19.07 0.00 6.53
2377 3509 2.660064 AATCTTCTCACCGGCGCCT 61.660 57.895 26.68 2.78 0.00 5.52
2378 3510 2.859273 AATCTTCTCACCGGCGCCTG 62.859 60.000 26.68 21.87 0.00 4.85
2394 3526 3.842869 CTGGAAGGAAGGAACTCCG 57.157 57.895 0.00 0.00 38.49 4.63
2395 3527 0.250513 CTGGAAGGAAGGAACTCCGG 59.749 60.000 0.00 0.00 38.49 5.14
2396 3528 1.078356 GGAAGGAAGGAACTCCGGC 60.078 63.158 0.00 0.00 38.49 6.13
2397 3529 1.448013 GAAGGAAGGAACTCCGGCG 60.448 63.158 0.00 0.00 38.49 6.46
2398 3530 1.885163 GAAGGAAGGAACTCCGGCGA 61.885 60.000 9.30 0.00 38.49 5.54
2399 3531 1.889530 AAGGAAGGAACTCCGGCGAG 61.890 60.000 9.30 6.64 38.49 5.03
2400 3532 2.509561 GAAGGAACTCCGGCGAGC 60.510 66.667 9.30 0.00 38.49 5.03
2401 3533 3.296709 GAAGGAACTCCGGCGAGCA 62.297 63.158 9.30 0.00 38.49 4.26
2402 3534 2.781595 GAAGGAACTCCGGCGAGCAA 62.782 60.000 9.30 0.00 38.49 3.91
2403 3535 2.125106 GGAACTCCGGCGAGCAAT 60.125 61.111 9.30 0.00 40.03 3.56
2404 3536 1.143183 GGAACTCCGGCGAGCAATA 59.857 57.895 9.30 0.00 40.03 1.90
2405 3537 1.152383 GGAACTCCGGCGAGCAATAC 61.152 60.000 9.30 0.00 40.03 1.89
2406 3538 0.179108 GAACTCCGGCGAGCAATACT 60.179 55.000 9.30 0.00 40.03 2.12
2407 3539 0.179108 AACTCCGGCGAGCAATACTC 60.179 55.000 9.30 0.00 40.03 2.59
2416 3548 2.703409 GCAATACTCGGTGCTGCG 59.297 61.111 0.00 0.00 37.78 5.18
2417 3549 2.813179 GCAATACTCGGTGCTGCGG 61.813 63.158 0.00 0.00 37.78 5.69
2418 3550 1.153647 CAATACTCGGTGCTGCGGA 60.154 57.895 0.00 0.00 0.00 5.54
2419 3551 1.141881 AATACTCGGTGCTGCGGAG 59.858 57.895 0.00 0.00 46.25 4.63
2420 3552 1.320344 AATACTCGGTGCTGCGGAGA 61.320 55.000 8.65 6.42 44.41 3.71
2421 3553 1.729470 ATACTCGGTGCTGCGGAGAG 61.729 60.000 8.65 15.91 44.41 3.20
2422 3554 2.814913 TACTCGGTGCTGCGGAGAGA 62.815 60.000 8.65 0.00 44.41 3.10
2423 3555 2.989253 TCGGTGCTGCGGAGAGAA 60.989 61.111 8.65 0.00 0.00 2.87
2424 3556 2.048222 CGGTGCTGCGGAGAGAAA 60.048 61.111 8.65 0.00 0.00 2.52
2425 3557 2.383527 CGGTGCTGCGGAGAGAAAC 61.384 63.158 8.65 0.00 0.00 2.78
2426 3558 2.383527 GGTGCTGCGGAGAGAAACG 61.384 63.158 8.65 0.00 0.00 3.60
2427 3559 2.048222 TGCTGCGGAGAGAAACGG 60.048 61.111 8.65 0.00 0.00 4.44
2428 3560 3.491652 GCTGCGGAGAGAAACGGC 61.492 66.667 8.65 0.00 0.00 5.68
2429 3561 3.181967 CTGCGGAGAGAAACGGCG 61.182 66.667 4.80 4.80 36.60 6.46
2432 3564 4.436998 CGGAGAGAAACGGCGCCT 62.437 66.667 26.68 5.36 0.00 5.52
2433 3565 2.815647 GGAGAGAAACGGCGCCTG 60.816 66.667 26.68 20.24 0.00 4.85
2434 3566 2.815647 GAGAGAAACGGCGCCTGG 60.816 66.667 26.68 12.89 0.00 4.45
2435 3567 3.296709 GAGAGAAACGGCGCCTGGA 62.297 63.158 26.68 0.00 0.00 3.86
2436 3568 2.358247 GAGAAACGGCGCCTGGAA 60.358 61.111 26.68 0.00 0.00 3.53
2437 3569 2.358737 AGAAACGGCGCCTGGAAG 60.359 61.111 26.68 11.18 0.00 3.46
2574 3708 2.109126 GCTTGGGCCTGCTTCTACG 61.109 63.158 4.53 0.00 0.00 3.51
2576 3710 0.535335 CTTGGGCCTGCTTCTACGTA 59.465 55.000 4.53 0.00 0.00 3.57
2577 3711 0.248289 TTGGGCCTGCTTCTACGTAC 59.752 55.000 4.53 0.00 0.00 3.67
2578 3712 1.226888 GGGCCTGCTTCTACGTACG 60.227 63.158 15.01 15.01 0.00 3.67
2579 3713 1.660560 GGGCCTGCTTCTACGTACGA 61.661 60.000 24.41 4.69 0.00 3.43
2580 3714 0.384669 GGCCTGCTTCTACGTACGAT 59.615 55.000 24.41 8.93 0.00 3.73
2581 3715 1.478137 GCCTGCTTCTACGTACGATG 58.522 55.000 24.41 13.70 0.00 3.84
2603 3737 1.597854 CTGCTTGTGCTTCCGGACA 60.598 57.895 1.83 0.00 39.89 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 6.458232 ACTGCAATGTACTACTCTCTTAGG 57.542 41.667 0.00 0.00 0.00 2.69
37 38 7.148373 GGTTAATGCGGAGTTATTACAAGACAA 60.148 37.037 0.00 0.00 0.00 3.18
56 57 8.127327 TGTGCATTTGTTTTTCATTGGTTAATG 58.873 29.630 0.00 0.00 44.03 1.90
115 116 3.971150 TGTGTTTTGAATAGCCGGTTTG 58.029 40.909 1.90 0.00 0.00 2.93
144 145 2.283388 CTGCAGGTTGGGGCACAT 60.283 61.111 5.57 0.00 35.86 3.21
145 146 3.790416 GACTGCAGGTTGGGGCACA 62.790 63.158 19.93 0.00 35.86 4.57
150 151 0.754957 TGGTTTGACTGCAGGTTGGG 60.755 55.000 19.93 0.00 0.00 4.12
169 170 3.181475 CGGGAGCAGTAGATTGTGTGTAT 60.181 47.826 0.00 0.00 0.00 2.29
195 1237 4.090057 GCGCACGGCCTCTTTCAC 62.090 66.667 0.30 0.00 34.80 3.18
339 1384 1.123077 CCAAGGTGATCATCCGGAGA 58.877 55.000 11.34 8.24 0.00 3.71
355 1400 1.254026 CCCGTCTGACTGTACTCCAA 58.746 55.000 6.21 0.00 0.00 3.53
365 1410 2.060980 AGGAGGATGCCCGTCTGAC 61.061 63.158 0.00 0.00 37.58 3.51
537 1585 2.673200 GCAGTGGAGGGAGATGGCA 61.673 63.158 0.00 0.00 0.00 4.92
551 1599 2.996395 CTCCCTCCATGCTGCAGT 59.004 61.111 16.64 0.00 0.00 4.40
724 1810 2.616765 CCCATCACCGACAACATGGTTA 60.617 50.000 0.00 0.00 35.96 2.85
802 1888 1.152943 TAGCGGCGAGGAGATGACT 60.153 57.895 12.98 0.00 0.00 3.41
839 1931 1.303317 ACAGGGCAGCCGTAAAAGG 60.303 57.895 6.25 0.00 0.00 3.11
889 1982 2.094494 CAGTACTCTGGCTGACGATGTT 60.094 50.000 0.00 0.00 37.97 2.71
901 1994 3.133542 TGCCCAATCTCATCAGTACTCTG 59.866 47.826 0.00 0.00 42.54 3.35
1005 2098 0.529337 CACTGCCGCTACCAGATCTG 60.529 60.000 16.24 16.24 34.47 2.90
1006 2099 1.680522 CCACTGCCGCTACCAGATCT 61.681 60.000 0.00 0.00 34.47 2.75
1007 2100 1.227380 CCACTGCCGCTACCAGATC 60.227 63.158 2.70 0.00 34.47 2.75
1008 2101 2.903357 CCACTGCCGCTACCAGAT 59.097 61.111 2.70 0.00 34.47 2.90
1009 2102 4.082523 GCCACTGCCGCTACCAGA 62.083 66.667 2.70 0.00 34.47 3.86
1010 2103 3.899981 TTGCCACTGCCGCTACCAG 62.900 63.158 0.00 0.00 36.33 4.00
1011 2104 3.947459 TTGCCACTGCCGCTACCA 61.947 61.111 0.00 0.00 36.33 3.25
1012 2105 3.431725 GTTGCCACTGCCGCTACC 61.432 66.667 0.00 0.00 36.33 3.18
1013 2106 2.668212 TGTTGCCACTGCCGCTAC 60.668 61.111 0.00 0.00 36.33 3.58
1014 2107 2.668212 GTGTTGCCACTGCCGCTA 60.668 61.111 0.00 0.00 38.61 4.26
1023 2116 1.074775 GGAGATGGTGGTGTTGCCA 59.925 57.895 0.00 0.00 46.95 4.92
1028 2121 0.321671 CAACGAGGAGATGGTGGTGT 59.678 55.000 0.00 0.00 0.00 4.16
1062 2155 3.311110 ACCGCGATCCACAGGTGT 61.311 61.111 8.23 0.00 35.36 4.16
1149 2250 1.673993 CACCGGTAAGCCATGCACA 60.674 57.895 6.87 0.00 34.09 4.57
1159 2260 1.196911 CCCATGTAGTCCACCGGTAA 58.803 55.000 6.87 0.00 0.00 2.85
1174 2275 2.284039 TGCCACAGCATTGCCCAT 60.284 55.556 4.70 0.00 46.52 4.00
1236 2340 2.757099 GATGCAGCCCAACCCAGG 60.757 66.667 0.00 0.00 0.00 4.45
1251 2355 4.227197 CCACCAGTCTATTCAGTAGGGAT 58.773 47.826 0.00 0.00 0.00 3.85
1267 2371 2.049433 GTCGGACGACACCACCAG 60.049 66.667 18.86 0.00 44.02 4.00
1386 2493 4.029186 ACGTCGAACCAGCGCGTA 62.029 61.111 8.43 0.00 40.27 4.42
1392 2499 1.443194 CCCGTACACGTCGAACCAG 60.443 63.158 0.00 0.00 37.74 4.00
1616 2723 6.419413 TCACTTGTTCAAAGAAAACACAACAC 59.581 34.615 0.00 0.00 36.41 3.32
1628 2735 3.798337 GCACACCATTCACTTGTTCAAAG 59.202 43.478 0.00 0.00 0.00 2.77
1657 2764 4.516698 AGACTGTATGTGCAGGAAGTTTTG 59.483 41.667 3.24 0.00 40.59 2.44
1664 2771 1.625315 AGCAAGACTGTATGTGCAGGA 59.375 47.619 11.06 0.00 40.59 3.86
1709 2816 5.298527 CGTCTTACAGATGGAGTACATGGTA 59.701 44.000 0.00 0.00 40.72 3.25
1786 2903 9.698309 CCTGACTCATGAACTAAACGATAATAT 57.302 33.333 0.00 0.00 0.00 1.28
1787 2904 8.909923 TCCTGACTCATGAACTAAACGATAATA 58.090 33.333 0.00 0.00 0.00 0.98
1788 2905 7.707035 GTCCTGACTCATGAACTAAACGATAAT 59.293 37.037 0.00 0.00 0.00 1.28
1791 2908 5.186021 AGTCCTGACTCATGAACTAAACGAT 59.814 40.000 0.00 0.00 36.92 3.73
1792 2909 4.523173 AGTCCTGACTCATGAACTAAACGA 59.477 41.667 0.00 0.00 36.92 3.85
1793 2910 4.810790 AGTCCTGACTCATGAACTAAACG 58.189 43.478 0.00 0.00 36.92 3.60
1796 2928 6.419484 TCAAAGTCCTGACTCATGAACTAA 57.581 37.500 11.24 0.00 41.58 2.24
1805 2937 3.982058 CACGTACTTCAAAGTCCTGACTC 59.018 47.826 0.00 0.00 41.58 3.36
1816 2948 7.556733 AATAACAAAGGAACACGTACTTCAA 57.443 32.000 7.30 0.00 0.00 2.69
1856 2988 1.000955 GAGGTCCGACTGACATGTTGT 59.999 52.381 0.00 2.07 46.38 3.32
1888 3020 7.906327 TGTATGCTATATGCCTCATAACTTGA 58.094 34.615 0.00 0.00 42.00 3.02
1900 3032 7.895975 TCTTGACATCTTGTATGCTATATGC 57.104 36.000 0.00 0.00 43.25 3.14
1901 3033 8.388853 GCATCTTGACATCTTGTATGCTATATG 58.611 37.037 0.00 0.00 36.32 1.78
1909 3041 6.117488 TGATGTGCATCTTGACATCTTGTAT 58.883 36.000 12.64 0.00 45.85 2.29
1959 3091 6.267817 TGCACAATTAATCTTCTTAGCATGC 58.732 36.000 10.51 10.51 0.00 4.06
1966 3098 9.768662 ACAATTTCTTGCACAATTAATCTTCTT 57.231 25.926 0.00 0.00 35.69 2.52
1967 3099 9.415544 GACAATTTCTTGCACAATTAATCTTCT 57.584 29.630 0.00 0.00 35.69 2.85
1968 3100 9.415544 AGACAATTTCTTGCACAATTAATCTTC 57.584 29.630 0.00 0.00 35.69 2.87
1969 3101 9.768662 AAGACAATTTCTTGCACAATTAATCTT 57.231 25.926 12.67 12.67 43.45 2.40
1970 3102 9.768662 AAAGACAATTTCTTGCACAATTAATCT 57.231 25.926 0.00 0.00 44.41 2.40
1971 3103 9.801714 CAAAGACAATTTCTTGCACAATTAATC 57.198 29.630 0.00 0.00 44.41 1.75
1972 3104 8.284693 GCAAAGACAATTTCTTGCACAATTAAT 58.715 29.630 0.98 0.00 44.41 1.40
1973 3105 7.279536 TGCAAAGACAATTTCTTGCACAATTAA 59.720 29.630 4.32 0.00 44.41 1.40
1974 3106 6.760298 TGCAAAGACAATTTCTTGCACAATTA 59.240 30.769 4.32 0.00 44.41 1.40
1975 3107 5.585445 TGCAAAGACAATTTCTTGCACAATT 59.415 32.000 4.32 0.00 44.41 2.32
1976 3108 5.117584 TGCAAAGACAATTTCTTGCACAAT 58.882 33.333 4.32 0.00 44.41 2.71
1977 3109 4.502016 TGCAAAGACAATTTCTTGCACAA 58.498 34.783 4.32 0.00 44.41 3.33
1978 3110 4.120792 TGCAAAGACAATTTCTTGCACA 57.879 36.364 4.32 4.05 44.41 4.57
1979 3111 4.746115 TCATGCAAAGACAATTTCTTGCAC 59.254 37.500 10.22 4.28 44.41 4.57
1980 3112 4.946445 TCATGCAAAGACAATTTCTTGCA 58.054 34.783 10.40 10.40 44.41 4.08
1981 3113 5.407387 ACATCATGCAAAGACAATTTCTTGC 59.593 36.000 0.00 0.00 44.41 4.01
1982 3114 6.643360 TGACATCATGCAAAGACAATTTCTTG 59.357 34.615 0.00 0.00 44.41 3.02
1983 3115 7.383687 ATGACATCATGCAAAGACAATTTCTT 58.616 30.769 0.00 0.00 39.69 2.52
1984 3116 6.335471 TGACATCATGCAAAGACAATTTCT 57.665 33.333 0.00 0.00 35.32 2.52
1985 3117 7.591006 AATGACATCATGCAAAGACAATTTC 57.409 32.000 0.00 0.00 36.56 2.17
1986 3118 7.658167 TCAAATGACATCATGCAAAGACAATTT 59.342 29.630 0.00 0.00 36.56 1.82
1987 3119 7.117236 GTCAAATGACATCATGCAAAGACAATT 59.883 33.333 8.63 0.00 44.18 2.32
1988 3120 6.588756 GTCAAATGACATCATGCAAAGACAAT 59.411 34.615 8.63 0.00 44.18 2.71
1989 3121 5.921976 GTCAAATGACATCATGCAAAGACAA 59.078 36.000 8.63 0.00 44.18 3.18
1990 3122 5.463286 GTCAAATGACATCATGCAAAGACA 58.537 37.500 8.63 0.00 44.18 3.41
2026 3158 9.853555 TGCATTTAATTCTCGACATTTTACAAT 57.146 25.926 0.00 0.00 0.00 2.71
2027 3159 9.340695 CTGCATTTAATTCTCGACATTTTACAA 57.659 29.630 0.00 0.00 0.00 2.41
2028 3160 8.511321 ACTGCATTTAATTCTCGACATTTTACA 58.489 29.630 0.00 0.00 0.00 2.41
2029 3161 8.895932 ACTGCATTTAATTCTCGACATTTTAC 57.104 30.769 0.00 0.00 0.00 2.01
2030 3162 8.181573 GGACTGCATTTAATTCTCGACATTTTA 58.818 33.333 0.00 0.00 0.00 1.52
2031 3163 7.029563 GGACTGCATTTAATTCTCGACATTTT 58.970 34.615 0.00 0.00 0.00 1.82
2032 3164 6.150976 TGGACTGCATTTAATTCTCGACATTT 59.849 34.615 0.00 0.00 0.00 2.32
2033 3165 5.647658 TGGACTGCATTTAATTCTCGACATT 59.352 36.000 0.00 0.00 0.00 2.71
2034 3166 5.185454 TGGACTGCATTTAATTCTCGACAT 58.815 37.500 0.00 0.00 0.00 3.06
2035 3167 4.574892 TGGACTGCATTTAATTCTCGACA 58.425 39.130 0.00 0.00 0.00 4.35
2036 3168 4.870426 TCTGGACTGCATTTAATTCTCGAC 59.130 41.667 0.00 0.00 0.00 4.20
2037 3169 5.084818 TCTGGACTGCATTTAATTCTCGA 57.915 39.130 0.00 0.00 0.00 4.04
2038 3170 5.998454 ATCTGGACTGCATTTAATTCTCG 57.002 39.130 0.00 0.00 0.00 4.04
2039 3171 8.341173 CACTAATCTGGACTGCATTTAATTCTC 58.659 37.037 0.00 0.00 0.00 2.87
2040 3172 8.049117 TCACTAATCTGGACTGCATTTAATTCT 58.951 33.333 0.00 0.00 0.00 2.40
2041 3173 8.213518 TCACTAATCTGGACTGCATTTAATTC 57.786 34.615 0.00 0.00 0.00 2.17
2042 3174 7.284034 CCTCACTAATCTGGACTGCATTTAATT 59.716 37.037 0.00 0.00 0.00 1.40
2043 3175 6.769822 CCTCACTAATCTGGACTGCATTTAAT 59.230 38.462 0.00 0.00 0.00 1.40
2044 3176 6.115446 CCTCACTAATCTGGACTGCATTTAA 58.885 40.000 0.00 0.00 0.00 1.52
2045 3177 5.674525 CCTCACTAATCTGGACTGCATTTA 58.325 41.667 0.00 0.00 0.00 1.40
2046 3178 4.521146 CCTCACTAATCTGGACTGCATTT 58.479 43.478 0.00 0.00 0.00 2.32
2047 3179 3.683847 GCCTCACTAATCTGGACTGCATT 60.684 47.826 0.00 0.00 0.00 3.56
2048 3180 2.158842 GCCTCACTAATCTGGACTGCAT 60.159 50.000 0.00 0.00 0.00 3.96
2049 3181 1.208052 GCCTCACTAATCTGGACTGCA 59.792 52.381 0.00 0.00 0.00 4.41
2050 3182 1.484240 AGCCTCACTAATCTGGACTGC 59.516 52.381 0.00 0.00 0.00 4.40
2051 3183 3.320541 CCTAGCCTCACTAATCTGGACTG 59.679 52.174 0.00 0.00 0.00 3.51
2052 3184 3.052490 ACCTAGCCTCACTAATCTGGACT 60.052 47.826 0.00 0.00 0.00 3.85
2053 3185 3.301274 ACCTAGCCTCACTAATCTGGAC 58.699 50.000 0.00 0.00 0.00 4.02
2054 3186 3.689872 ACCTAGCCTCACTAATCTGGA 57.310 47.619 0.00 0.00 0.00 3.86
2055 3187 3.964031 AGAACCTAGCCTCACTAATCTGG 59.036 47.826 0.00 0.00 0.00 3.86
2056 3188 5.355596 CAAGAACCTAGCCTCACTAATCTG 58.644 45.833 0.00 0.00 0.00 2.90
2057 3189 4.407296 CCAAGAACCTAGCCTCACTAATCT 59.593 45.833 0.00 0.00 0.00 2.40
2058 3190 4.162509 ACCAAGAACCTAGCCTCACTAATC 59.837 45.833 0.00 0.00 0.00 1.75
2059 3191 4.104831 ACCAAGAACCTAGCCTCACTAAT 58.895 43.478 0.00 0.00 0.00 1.73
2060 3192 3.514309 GACCAAGAACCTAGCCTCACTAA 59.486 47.826 0.00 0.00 0.00 2.24
2061 3193 3.097614 GACCAAGAACCTAGCCTCACTA 58.902 50.000 0.00 0.00 0.00 2.74
2062 3194 1.903183 GACCAAGAACCTAGCCTCACT 59.097 52.381 0.00 0.00 0.00 3.41
2063 3195 1.623811 TGACCAAGAACCTAGCCTCAC 59.376 52.381 0.00 0.00 0.00 3.51
2064 3196 2.024176 TGACCAAGAACCTAGCCTCA 57.976 50.000 0.00 0.00 0.00 3.86
2065 3197 2.701107 GTTGACCAAGAACCTAGCCTC 58.299 52.381 0.00 0.00 0.00 4.70
2066 3198 1.002087 CGTTGACCAAGAACCTAGCCT 59.998 52.381 0.00 0.00 0.00 4.58
2067 3199 1.001633 TCGTTGACCAAGAACCTAGCC 59.998 52.381 0.00 0.00 0.00 3.93
2068 3200 2.450609 TCGTTGACCAAGAACCTAGC 57.549 50.000 0.00 0.00 0.00 3.42
2069 3201 5.941948 AAAATCGTTGACCAAGAACCTAG 57.058 39.130 0.00 0.00 0.00 3.02
2070 3202 7.162761 TGATAAAATCGTTGACCAAGAACCTA 58.837 34.615 0.00 0.00 0.00 3.08
2071 3203 6.001460 TGATAAAATCGTTGACCAAGAACCT 58.999 36.000 0.00 0.00 0.00 3.50
2072 3204 6.249035 TGATAAAATCGTTGACCAAGAACC 57.751 37.500 0.00 0.00 0.00 3.62
2073 3205 8.742554 AAATGATAAAATCGTTGACCAAGAAC 57.257 30.769 0.00 0.00 38.45 3.01
2074 3206 9.405587 GAAAATGATAAAATCGTTGACCAAGAA 57.594 29.630 0.00 0.00 38.45 2.52
2075 3207 8.026607 GGAAAATGATAAAATCGTTGACCAAGA 58.973 33.333 10.21 0.00 38.45 3.02
2076 3208 8.028938 AGGAAAATGATAAAATCGTTGACCAAG 58.971 33.333 14.34 0.00 38.45 3.61
2077 3209 7.891561 AGGAAAATGATAAAATCGTTGACCAA 58.108 30.769 14.34 0.00 38.45 3.67
2078 3210 7.461182 AGGAAAATGATAAAATCGTTGACCA 57.539 32.000 14.34 0.00 38.45 4.02
2079 3211 9.849166 TTAAGGAAAATGATAAAATCGTTGACC 57.151 29.630 0.00 3.37 38.45 4.02
2097 3229 9.985730 TCAACGTTAATACTTCTCTTAAGGAAA 57.014 29.630 0.00 0.00 30.92 3.13
2099 3231 9.582431 CATCAACGTTAATACTTCTCTTAAGGA 57.418 33.333 0.00 0.00 30.92 3.36
2100 3232 9.367444 ACATCAACGTTAATACTTCTCTTAAGG 57.633 33.333 0.00 0.00 0.00 2.69
2103 3235 8.653338 GCAACATCAACGTTAATACTTCTCTTA 58.347 33.333 0.00 0.00 0.00 2.10
2104 3236 7.360946 GGCAACATCAACGTTAATACTTCTCTT 60.361 37.037 0.00 0.00 0.00 2.85
2105 3237 6.092259 GGCAACATCAACGTTAATACTTCTCT 59.908 38.462 0.00 0.00 0.00 3.10
2106 3238 6.248631 GGCAACATCAACGTTAATACTTCTC 58.751 40.000 0.00 0.00 0.00 2.87
2107 3239 5.123344 GGGCAACATCAACGTTAATACTTCT 59.877 40.000 0.00 0.00 39.74 2.85
2108 3240 5.123344 AGGGCAACATCAACGTTAATACTTC 59.877 40.000 0.00 0.00 39.74 3.01
2109 3241 5.007682 AGGGCAACATCAACGTTAATACTT 58.992 37.500 0.00 0.00 39.74 2.24
2110 3242 4.585879 AGGGCAACATCAACGTTAATACT 58.414 39.130 0.00 0.00 39.74 2.12
2111 3243 4.957759 AGGGCAACATCAACGTTAATAC 57.042 40.909 0.00 0.00 39.74 1.89
2112 3244 6.459024 GCATTAGGGCAACATCAACGTTAATA 60.459 38.462 0.00 0.00 39.74 0.98
2113 3245 5.678616 GCATTAGGGCAACATCAACGTTAAT 60.679 40.000 0.00 0.00 39.74 1.40
2114 3246 4.380023 GCATTAGGGCAACATCAACGTTAA 60.380 41.667 0.00 0.00 39.74 2.01
2115 3247 3.127895 GCATTAGGGCAACATCAACGTTA 59.872 43.478 0.00 0.00 39.74 3.18
2116 3248 2.094752 GCATTAGGGCAACATCAACGTT 60.095 45.455 0.00 0.00 39.74 3.99
2117 3249 1.472480 GCATTAGGGCAACATCAACGT 59.528 47.619 0.00 0.00 39.74 3.99
2118 3250 1.745087 AGCATTAGGGCAACATCAACG 59.255 47.619 0.00 0.00 39.74 4.10
2119 3251 2.493278 ACAGCATTAGGGCAACATCAAC 59.507 45.455 0.00 0.00 39.74 3.18
2120 3252 2.806434 ACAGCATTAGGGCAACATCAA 58.194 42.857 0.00 0.00 39.74 2.57
2121 3253 2.512692 ACAGCATTAGGGCAACATCA 57.487 45.000 0.00 0.00 39.74 3.07
2122 3254 4.339247 ACAATACAGCATTAGGGCAACATC 59.661 41.667 0.00 0.00 39.74 3.06
2123 3255 4.280819 ACAATACAGCATTAGGGCAACAT 58.719 39.130 0.00 0.00 39.74 2.71
2124 3256 3.694072 GACAATACAGCATTAGGGCAACA 59.306 43.478 0.00 0.00 39.74 3.33
2125 3257 3.066760 GGACAATACAGCATTAGGGCAAC 59.933 47.826 0.00 0.00 35.83 4.17
2126 3258 3.287222 GGACAATACAGCATTAGGGCAA 58.713 45.455 0.00 0.00 35.83 4.52
2127 3259 2.744823 CGGACAATACAGCATTAGGGCA 60.745 50.000 0.00 0.00 35.83 5.36
2128 3260 1.873591 CGGACAATACAGCATTAGGGC 59.126 52.381 0.00 0.00 0.00 5.19
2129 3261 3.069586 TCTCGGACAATACAGCATTAGGG 59.930 47.826 0.00 0.00 0.00 3.53
2130 3262 4.322080 TCTCGGACAATACAGCATTAGG 57.678 45.455 0.00 0.00 0.00 2.69
2131 3263 6.258727 ACAATTCTCGGACAATACAGCATTAG 59.741 38.462 0.00 0.00 0.00 1.73
2132 3264 6.112734 ACAATTCTCGGACAATACAGCATTA 58.887 36.000 0.00 0.00 0.00 1.90
2133 3265 4.943705 ACAATTCTCGGACAATACAGCATT 59.056 37.500 0.00 0.00 0.00 3.56
2134 3266 4.517285 ACAATTCTCGGACAATACAGCAT 58.483 39.130 0.00 0.00 0.00 3.79
2135 3267 3.932710 GACAATTCTCGGACAATACAGCA 59.067 43.478 0.00 0.00 0.00 4.41
2136 3268 4.184629 AGACAATTCTCGGACAATACAGC 58.815 43.478 0.00 0.00 0.00 4.40
2137 3269 6.454318 CGAAAGACAATTCTCGGACAATACAG 60.454 42.308 0.00 0.00 0.00 2.74
2138 3270 5.347635 CGAAAGACAATTCTCGGACAATACA 59.652 40.000 0.00 0.00 0.00 2.29
2139 3271 5.575606 TCGAAAGACAATTCTCGGACAATAC 59.424 40.000 0.00 0.00 33.31 1.89
2140 3272 5.716094 TCGAAAGACAATTCTCGGACAATA 58.284 37.500 0.00 0.00 33.31 1.90
2141 3273 4.566004 TCGAAAGACAATTCTCGGACAAT 58.434 39.130 0.00 0.00 33.31 2.71
2142 3274 3.985008 TCGAAAGACAATTCTCGGACAA 58.015 40.909 0.00 0.00 33.31 3.18
2143 3275 3.575630 CTCGAAAGACAATTCTCGGACA 58.424 45.455 0.00 0.00 35.39 4.02
2144 3276 2.924290 CCTCGAAAGACAATTCTCGGAC 59.076 50.000 0.00 0.00 35.39 4.79
2145 3277 2.094182 CCCTCGAAAGACAATTCTCGGA 60.094 50.000 0.00 0.00 35.39 4.55
2146 3278 2.271800 CCCTCGAAAGACAATTCTCGG 58.728 52.381 0.00 0.00 35.39 4.63
2147 3279 2.271800 CCCCTCGAAAGACAATTCTCG 58.728 52.381 0.00 0.00 35.39 4.04
2148 3280 3.336138 ACCCCTCGAAAGACAATTCTC 57.664 47.619 0.00 0.00 35.39 2.87
2149 3281 4.094476 TCTACCCCTCGAAAGACAATTCT 58.906 43.478 0.00 0.00 35.39 2.40
2150 3282 4.467198 TCTACCCCTCGAAAGACAATTC 57.533 45.455 0.00 0.00 35.39 2.17
2151 3283 4.903045 TTCTACCCCTCGAAAGACAATT 57.097 40.909 0.00 0.00 35.39 2.32
2152 3284 4.903045 TTTCTACCCCTCGAAAGACAAT 57.097 40.909 0.00 0.00 35.39 2.71
2153 3285 4.141665 TGTTTTCTACCCCTCGAAAGACAA 60.142 41.667 0.00 0.00 35.39 3.18
2154 3286 3.388676 TGTTTTCTACCCCTCGAAAGACA 59.611 43.478 0.00 0.00 35.39 3.41
2155 3287 3.999046 TGTTTTCTACCCCTCGAAAGAC 58.001 45.455 0.00 0.00 35.39 3.01
2156 3288 4.903045 ATGTTTTCTACCCCTCGAAAGA 57.097 40.909 0.00 0.00 39.12 2.52
2157 3289 5.106277 GGAAATGTTTTCTACCCCTCGAAAG 60.106 44.000 0.52 0.00 31.52 2.62
2158 3290 4.763279 GGAAATGTTTTCTACCCCTCGAAA 59.237 41.667 0.52 0.00 0.00 3.46
2159 3291 4.202482 TGGAAATGTTTTCTACCCCTCGAA 60.202 41.667 0.52 0.00 0.00 3.71
2160 3292 3.328343 TGGAAATGTTTTCTACCCCTCGA 59.672 43.478 0.52 0.00 0.00 4.04
2161 3293 3.681593 TGGAAATGTTTTCTACCCCTCG 58.318 45.455 0.52 0.00 0.00 4.63
2162 3294 6.605471 AAATGGAAATGTTTTCTACCCCTC 57.395 37.500 0.52 0.00 0.00 4.30
2163 3295 7.292356 AGAAAAATGGAAATGTTTTCTACCCCT 59.708 33.333 8.46 0.00 45.29 4.79
2164 3296 7.387673 CAGAAAAATGGAAATGTTTTCTACCCC 59.612 37.037 9.57 0.00 45.33 4.95
2165 3297 8.147704 TCAGAAAAATGGAAATGTTTTCTACCC 58.852 33.333 9.57 0.00 45.33 3.69
2166 3298 8.978539 GTCAGAAAAATGGAAATGTTTTCTACC 58.021 33.333 9.57 2.03 45.33 3.18
2167 3299 9.528018 TGTCAGAAAAATGGAAATGTTTTCTAC 57.472 29.630 9.57 9.13 45.33 2.59
2170 3302 8.829612 ACATGTCAGAAAAATGGAAATGTTTTC 58.170 29.630 0.00 0.00 40.14 2.29
2171 3303 8.735692 ACATGTCAGAAAAATGGAAATGTTTT 57.264 26.923 0.00 0.00 0.00 2.43
2172 3304 8.735692 AACATGTCAGAAAAATGGAAATGTTT 57.264 26.923 0.00 0.00 0.00 2.83
2173 3305 8.735692 AAACATGTCAGAAAAATGGAAATGTT 57.264 26.923 0.00 0.00 0.00 2.71
2174 3306 9.829507 TTAAACATGTCAGAAAAATGGAAATGT 57.170 25.926 0.00 0.00 0.00 2.71
2178 3310 9.658799 TGTTTTAAACATGTCAGAAAAATGGAA 57.341 25.926 6.41 0.00 36.25 3.53
2179 3311 9.092876 GTGTTTTAAACATGTCAGAAAAATGGA 57.907 29.630 13.84 0.00 44.35 3.41
2180 3312 9.097257 AGTGTTTTAAACATGTCAGAAAAATGG 57.903 29.630 13.84 0.00 44.35 3.16
2184 3316 9.698309 TGAAAGTGTTTTAAACATGTCAGAAAA 57.302 25.926 13.84 3.70 44.35 2.29
2185 3317 9.352784 CTGAAAGTGTTTTAAACATGTCAGAAA 57.647 29.630 26.32 0.00 44.35 2.52
2186 3318 7.487829 GCTGAAAGTGTTTTAAACATGTCAGAA 59.512 33.333 30.28 12.06 44.35 3.02
2187 3319 6.972328 GCTGAAAGTGTTTTAAACATGTCAGA 59.028 34.615 30.28 12.06 44.35 3.27
2188 3320 6.974622 AGCTGAAAGTGTTTTAAACATGTCAG 59.025 34.615 26.21 26.21 44.35 3.51
2189 3321 6.862209 AGCTGAAAGTGTTTTAAACATGTCA 58.138 32.000 13.84 14.70 44.35 3.58
2190 3322 7.196331 AGAGCTGAAAGTGTTTTAAACATGTC 58.804 34.615 13.84 11.37 44.35 3.06
2191 3323 7.100458 AGAGCTGAAAGTGTTTTAAACATGT 57.900 32.000 13.84 0.00 44.35 3.21
2192 3324 7.805071 CCTAGAGCTGAAAGTGTTTTAAACATG 59.195 37.037 13.84 0.00 44.35 3.21
2193 3325 7.719633 TCCTAGAGCTGAAAGTGTTTTAAACAT 59.280 33.333 13.84 0.00 44.35 2.71
2194 3326 7.051623 TCCTAGAGCTGAAAGTGTTTTAAACA 58.948 34.615 6.41 6.41 39.52 2.83
2195 3327 7.492352 TCCTAGAGCTGAAAGTGTTTTAAAC 57.508 36.000 0.20 0.20 35.30 2.01
2196 3328 7.117812 CGATCCTAGAGCTGAAAGTGTTTTAAA 59.882 37.037 0.00 0.00 35.30 1.52
2197 3329 6.590292 CGATCCTAGAGCTGAAAGTGTTTTAA 59.410 38.462 0.00 0.00 35.30 1.52
2198 3330 6.100004 CGATCCTAGAGCTGAAAGTGTTTTA 58.900 40.000 0.00 0.00 35.30 1.52
2199 3331 4.932200 CGATCCTAGAGCTGAAAGTGTTTT 59.068 41.667 0.00 0.00 35.30 2.43
2200 3332 4.499183 CGATCCTAGAGCTGAAAGTGTTT 58.501 43.478 0.00 0.00 35.30 2.83
2201 3333 3.118956 CCGATCCTAGAGCTGAAAGTGTT 60.119 47.826 0.00 0.00 35.30 3.32
2202 3334 2.428890 CCGATCCTAGAGCTGAAAGTGT 59.571 50.000 0.00 0.00 35.30 3.55
2203 3335 2.223923 CCCGATCCTAGAGCTGAAAGTG 60.224 54.545 0.00 0.00 35.30 3.16
2204 3336 2.035632 CCCGATCCTAGAGCTGAAAGT 58.964 52.381 0.00 0.00 35.30 2.66
2205 3337 1.342819 CCCCGATCCTAGAGCTGAAAG 59.657 57.143 0.00 0.00 0.00 2.62
2206 3338 1.343075 ACCCCGATCCTAGAGCTGAAA 60.343 52.381 0.00 0.00 0.00 2.69
2207 3339 0.261991 ACCCCGATCCTAGAGCTGAA 59.738 55.000 0.00 0.00 0.00 3.02
2208 3340 0.261991 AACCCCGATCCTAGAGCTGA 59.738 55.000 0.00 0.00 0.00 4.26
2209 3341 1.614413 GTAACCCCGATCCTAGAGCTG 59.386 57.143 0.00 0.00 0.00 4.24
2210 3342 1.217183 TGTAACCCCGATCCTAGAGCT 59.783 52.381 0.00 0.00 0.00 4.09
2211 3343 1.700955 TGTAACCCCGATCCTAGAGC 58.299 55.000 0.00 0.00 0.00 4.09
2212 3344 4.153411 AGAATGTAACCCCGATCCTAGAG 58.847 47.826 0.00 0.00 0.00 2.43
2213 3345 4.194678 AGAATGTAACCCCGATCCTAGA 57.805 45.455 0.00 0.00 0.00 2.43
2214 3346 4.957684 AAGAATGTAACCCCGATCCTAG 57.042 45.455 0.00 0.00 0.00 3.02
2215 3347 5.433526 CAAAAGAATGTAACCCCGATCCTA 58.566 41.667 0.00 0.00 0.00 2.94
2216 3348 4.270008 CAAAAGAATGTAACCCCGATCCT 58.730 43.478 0.00 0.00 0.00 3.24
2217 3349 3.181490 GCAAAAGAATGTAACCCCGATCC 60.181 47.826 0.00 0.00 0.00 3.36
2218 3350 3.442273 TGCAAAAGAATGTAACCCCGATC 59.558 43.478 0.00 0.00 0.00 3.69
2219 3351 3.426615 TGCAAAAGAATGTAACCCCGAT 58.573 40.909 0.00 0.00 0.00 4.18
2220 3352 2.865079 TGCAAAAGAATGTAACCCCGA 58.135 42.857 0.00 0.00 0.00 5.14
2221 3353 3.443681 AGATGCAAAAGAATGTAACCCCG 59.556 43.478 0.00 0.00 0.00 5.73
2222 3354 5.652452 AGTAGATGCAAAAGAATGTAACCCC 59.348 40.000 0.00 0.00 0.00 4.95
2223 3355 6.183360 GGAGTAGATGCAAAAGAATGTAACCC 60.183 42.308 0.00 0.00 0.00 4.11
2224 3356 6.374333 TGGAGTAGATGCAAAAGAATGTAACC 59.626 38.462 0.00 0.00 0.00 2.85
2225 3357 7.377766 TGGAGTAGATGCAAAAGAATGTAAC 57.622 36.000 0.00 0.00 0.00 2.50
2226 3358 8.579850 AATGGAGTAGATGCAAAAGAATGTAA 57.420 30.769 0.00 0.00 30.55 2.41
2227 3359 7.283127 GGAATGGAGTAGATGCAAAAGAATGTA 59.717 37.037 0.00 0.00 30.55 2.29
2228 3360 6.096001 GGAATGGAGTAGATGCAAAAGAATGT 59.904 38.462 0.00 0.00 30.55 2.71
2229 3361 6.320672 AGGAATGGAGTAGATGCAAAAGAATG 59.679 38.462 0.00 0.00 30.55 2.67
2230 3362 6.430007 AGGAATGGAGTAGATGCAAAAGAAT 58.570 36.000 0.00 0.00 30.55 2.40
2231 3363 5.819991 AGGAATGGAGTAGATGCAAAAGAA 58.180 37.500 0.00 0.00 30.55 2.52
2232 3364 5.441718 AGGAATGGAGTAGATGCAAAAGA 57.558 39.130 0.00 0.00 30.55 2.52
2233 3365 5.067023 GGAAGGAATGGAGTAGATGCAAAAG 59.933 44.000 0.00 0.00 30.55 2.27
2234 3366 4.949856 GGAAGGAATGGAGTAGATGCAAAA 59.050 41.667 0.00 0.00 30.55 2.44
2235 3367 4.228210 AGGAAGGAATGGAGTAGATGCAAA 59.772 41.667 0.00 0.00 30.55 3.68
2236 3368 3.782523 AGGAAGGAATGGAGTAGATGCAA 59.217 43.478 0.00 0.00 30.55 4.08
2237 3369 3.387962 AGGAAGGAATGGAGTAGATGCA 58.612 45.455 0.00 0.00 0.00 3.96
2238 3370 5.552870 TTAGGAAGGAATGGAGTAGATGC 57.447 43.478 0.00 0.00 0.00 3.91
2244 3376 9.225682 TCACTTATATTTAGGAAGGAATGGAGT 57.774 33.333 0.00 0.00 0.00 3.85
2264 3396 9.244292 ACATAGTTCAGAGTGTAGATTCACTTA 57.756 33.333 0.98 0.00 46.81 2.24
2265 3397 8.128322 ACATAGTTCAGAGTGTAGATTCACTT 57.872 34.615 0.98 0.00 46.81 3.16
2267 3399 7.767261 AGACATAGTTCAGAGTGTAGATTCAC 58.233 38.462 0.00 0.00 38.46 3.18
2268 3400 7.946381 AGACATAGTTCAGAGTGTAGATTCA 57.054 36.000 0.00 0.00 0.00 2.57
2328 3460 9.826574 TTGCCGTGTCTAAATATAAGTATTTCT 57.173 29.630 0.00 0.00 40.21 2.52
2330 3462 9.052759 CCTTGCCGTGTCTAAATATAAGTATTT 57.947 33.333 0.00 0.00 41.92 1.40
2331 3463 7.172703 GCCTTGCCGTGTCTAAATATAAGTATT 59.827 37.037 0.00 0.00 31.89 1.89
2332 3464 6.649557 GCCTTGCCGTGTCTAAATATAAGTAT 59.350 38.462 0.00 0.00 0.00 2.12
2333 3465 5.987347 GCCTTGCCGTGTCTAAATATAAGTA 59.013 40.000 0.00 0.00 0.00 2.24
2334 3466 4.814771 GCCTTGCCGTGTCTAAATATAAGT 59.185 41.667 0.00 0.00 0.00 2.24
2335 3467 4.213482 GGCCTTGCCGTGTCTAAATATAAG 59.787 45.833 0.00 0.00 39.62 1.73
2336 3468 4.131596 GGCCTTGCCGTGTCTAAATATAA 58.868 43.478 0.00 0.00 39.62 0.98
2337 3469 3.735591 GGCCTTGCCGTGTCTAAATATA 58.264 45.455 0.00 0.00 39.62 0.86
2338 3470 2.572290 GGCCTTGCCGTGTCTAAATAT 58.428 47.619 0.00 0.00 39.62 1.28
2339 3471 2.032680 GGCCTTGCCGTGTCTAAATA 57.967 50.000 0.00 0.00 39.62 1.40
2340 3472 2.868253 GGCCTTGCCGTGTCTAAAT 58.132 52.632 0.00 0.00 39.62 1.40
2341 3473 4.390048 GGCCTTGCCGTGTCTAAA 57.610 55.556 0.00 0.00 39.62 1.85
2351 3483 0.813821 GGTGAGAAGATTGGCCTTGC 59.186 55.000 3.32 0.00 0.00 4.01
2352 3484 1.089920 CGGTGAGAAGATTGGCCTTG 58.910 55.000 3.32 0.00 0.00 3.61
2353 3485 0.035056 CCGGTGAGAAGATTGGCCTT 60.035 55.000 3.32 0.00 0.00 4.35
2354 3486 1.604378 CCGGTGAGAAGATTGGCCT 59.396 57.895 3.32 0.00 0.00 5.19
2355 3487 2.115291 GCCGGTGAGAAGATTGGCC 61.115 63.158 1.90 0.00 36.51 5.36
2356 3488 2.464459 CGCCGGTGAGAAGATTGGC 61.464 63.158 10.20 0.00 39.10 4.52
2357 3489 2.464459 GCGCCGGTGAGAAGATTGG 61.464 63.158 21.76 0.00 0.00 3.16
2358 3490 2.464459 GGCGCCGGTGAGAAGATTG 61.464 63.158 21.76 0.00 0.00 2.67
2359 3491 2.125106 GGCGCCGGTGAGAAGATT 60.125 61.111 21.76 0.00 0.00 2.40
2360 3492 3.077556 AGGCGCCGGTGAGAAGAT 61.078 61.111 23.20 0.00 0.00 2.40
2361 3493 4.069232 CAGGCGCCGGTGAGAAGA 62.069 66.667 23.20 0.00 0.00 2.87
2371 3503 3.268103 TTCCTTCCTTCCAGGCGCC 62.268 63.158 21.89 21.89 34.61 6.53
2372 3504 2.041115 GTTCCTTCCTTCCAGGCGC 61.041 63.158 0.00 0.00 34.61 6.53
2373 3505 0.391793 GAGTTCCTTCCTTCCAGGCG 60.392 60.000 0.00 0.00 34.61 5.52
2374 3506 0.034960 GGAGTTCCTTCCTTCCAGGC 60.035 60.000 0.00 0.00 34.61 4.85
2375 3507 0.250513 CGGAGTTCCTTCCTTCCAGG 59.749 60.000 0.00 0.00 34.96 4.45
2376 3508 0.250513 CCGGAGTTCCTTCCTTCCAG 59.749 60.000 0.00 0.00 34.96 3.86
2377 3509 1.838073 GCCGGAGTTCCTTCCTTCCA 61.838 60.000 5.05 0.00 34.96 3.53
2378 3510 1.078356 GCCGGAGTTCCTTCCTTCC 60.078 63.158 5.05 0.00 34.96 3.46
2379 3511 1.448013 CGCCGGAGTTCCTTCCTTC 60.448 63.158 5.05 0.00 34.96 3.46
2380 3512 1.889530 CTCGCCGGAGTTCCTTCCTT 61.890 60.000 5.05 0.00 35.48 3.36
2381 3513 2.283676 TCGCCGGAGTTCCTTCCT 60.284 61.111 5.05 0.00 34.96 3.36
2382 3514 2.184579 CTCGCCGGAGTTCCTTCC 59.815 66.667 5.05 0.00 35.48 3.46
2383 3515 2.509561 GCTCGCCGGAGTTCCTTC 60.510 66.667 5.05 0.00 42.53 3.46
2384 3516 2.185310 ATTGCTCGCCGGAGTTCCTT 62.185 55.000 5.05 0.00 42.53 3.36
2385 3517 1.327690 TATTGCTCGCCGGAGTTCCT 61.328 55.000 5.05 0.00 42.53 3.36
2386 3518 1.143183 TATTGCTCGCCGGAGTTCC 59.857 57.895 5.05 0.00 42.53 3.62
2387 3519 0.179108 AGTATTGCTCGCCGGAGTTC 60.179 55.000 5.05 0.00 42.53 3.01
2388 3520 0.179108 GAGTATTGCTCGCCGGAGTT 60.179 55.000 5.05 0.00 42.53 3.01
2389 3521 1.437986 GAGTATTGCTCGCCGGAGT 59.562 57.895 5.05 0.00 42.53 3.85
2390 3522 4.327885 GAGTATTGCTCGCCGGAG 57.672 61.111 5.05 0.00 43.46 4.63
2397 3529 1.756375 CGCAGCACCGAGTATTGCTC 61.756 60.000 0.00 0.00 46.31 4.26
2399 3531 2.703409 CGCAGCACCGAGTATTGC 59.297 61.111 0.00 0.00 39.16 3.56
2400 3532 1.148157 CTCCGCAGCACCGAGTATTG 61.148 60.000 0.00 0.00 0.00 1.90
2401 3533 1.141881 CTCCGCAGCACCGAGTATT 59.858 57.895 0.00 0.00 0.00 1.89
2402 3534 1.729470 CTCTCCGCAGCACCGAGTAT 61.729 60.000 0.00 0.00 0.00 2.12
2403 3535 2.360726 TCTCCGCAGCACCGAGTA 60.361 61.111 0.00 0.00 0.00 2.59
2404 3536 3.753434 CTCTCCGCAGCACCGAGT 61.753 66.667 0.00 0.00 0.00 4.18
2405 3537 2.492449 TTTCTCTCCGCAGCACCGAG 62.492 60.000 0.00 0.00 0.00 4.63
2406 3538 2.570284 TTTCTCTCCGCAGCACCGA 61.570 57.895 0.00 0.00 0.00 4.69
2407 3539 2.048222 TTTCTCTCCGCAGCACCG 60.048 61.111 0.00 0.00 0.00 4.94
2408 3540 2.383527 CGTTTCTCTCCGCAGCACC 61.384 63.158 0.00 0.00 0.00 5.01
2409 3541 2.383527 CCGTTTCTCTCCGCAGCAC 61.384 63.158 0.00 0.00 0.00 4.40
2410 3542 2.048222 CCGTTTCTCTCCGCAGCA 60.048 61.111 0.00 0.00 0.00 4.41
2411 3543 3.491652 GCCGTTTCTCTCCGCAGC 61.492 66.667 0.00 0.00 0.00 5.25
2412 3544 3.181967 CGCCGTTTCTCTCCGCAG 61.182 66.667 0.00 0.00 0.00 5.18
2415 3547 4.436998 AGGCGCCGTTTCTCTCCG 62.437 66.667 23.20 0.00 0.00 4.63
2416 3548 2.815647 CAGGCGCCGTTTCTCTCC 60.816 66.667 23.20 0.00 0.00 3.71
2417 3549 2.781595 TTCCAGGCGCCGTTTCTCTC 62.782 60.000 23.20 0.00 0.00 3.20
2418 3550 2.788191 CTTCCAGGCGCCGTTTCTCT 62.788 60.000 23.20 0.00 0.00 3.10
2419 3551 2.358247 TTCCAGGCGCCGTTTCTC 60.358 61.111 23.20 0.00 0.00 2.87
2420 3552 2.358737 CTTCCAGGCGCCGTTTCT 60.359 61.111 23.20 0.00 0.00 2.52
2421 3553 3.431725 CCTTCCAGGCGCCGTTTC 61.432 66.667 23.20 0.00 0.00 2.78
2422 3554 3.485346 TTCCTTCCAGGCGCCGTTT 62.485 57.895 23.20 0.00 34.61 3.60
2423 3555 3.901797 CTTCCTTCCAGGCGCCGTT 62.902 63.158 23.20 0.00 34.61 4.44
2424 3556 4.394712 CTTCCTTCCAGGCGCCGT 62.395 66.667 23.20 6.69 34.61 5.68
2426 3558 3.569200 AACCTTCCTTCCAGGCGCC 62.569 63.158 21.89 21.89 34.61 6.53
2427 3559 1.587043 GAAACCTTCCTTCCAGGCGC 61.587 60.000 0.00 0.00 34.61 6.53
2428 3560 0.250727 TGAAACCTTCCTTCCAGGCG 60.251 55.000 0.00 0.00 34.61 5.52
2429 3561 1.613925 GTTGAAACCTTCCTTCCAGGC 59.386 52.381 0.00 0.00 34.61 4.85
2430 3562 1.880027 CGTTGAAACCTTCCTTCCAGG 59.120 52.381 0.00 0.00 37.45 4.45
2431 3563 1.880027 CCGTTGAAACCTTCCTTCCAG 59.120 52.381 0.00 0.00 0.00 3.86
2432 3564 1.975660 CCGTTGAAACCTTCCTTCCA 58.024 50.000 0.00 0.00 0.00 3.53
2433 3565 0.596577 GCCGTTGAAACCTTCCTTCC 59.403 55.000 0.00 0.00 0.00 3.46
2434 3566 0.237498 CGCCGTTGAAACCTTCCTTC 59.763 55.000 0.00 0.00 0.00 3.46
2435 3567 0.464916 ACGCCGTTGAAACCTTCCTT 60.465 50.000 0.00 0.00 0.00 3.36
2436 3568 0.883370 GACGCCGTTGAAACCTTCCT 60.883 55.000 0.00 0.00 0.00 3.36
2437 3569 0.883370 AGACGCCGTTGAAACCTTCC 60.883 55.000 0.00 0.00 0.00 3.46
2438 3570 0.942252 AAGACGCCGTTGAAACCTTC 59.058 50.000 0.00 0.00 0.00 3.46
2439 3571 0.942252 GAAGACGCCGTTGAAACCTT 59.058 50.000 0.00 0.00 0.00 3.50
2440 3572 0.179067 TGAAGACGCCGTTGAAACCT 60.179 50.000 0.00 0.00 0.00 3.50
2441 3573 0.872388 ATGAAGACGCCGTTGAAACC 59.128 50.000 0.00 0.00 0.00 3.27
2442 3574 1.399727 CCATGAAGACGCCGTTGAAAC 60.400 52.381 0.00 0.00 0.00 2.78
2443 3575 0.871722 CCATGAAGACGCCGTTGAAA 59.128 50.000 0.00 0.00 0.00 2.69
2444 3576 1.573829 GCCATGAAGACGCCGTTGAA 61.574 55.000 0.00 0.00 0.00 2.69
2445 3577 2.032634 GCCATGAAGACGCCGTTGA 61.033 57.895 0.00 0.00 0.00 3.18
2446 3578 2.480555 GCCATGAAGACGCCGTTG 59.519 61.111 0.00 0.00 0.00 4.10
2447 3579 3.118454 CGCCATGAAGACGCCGTT 61.118 61.111 0.00 0.00 0.00 4.44
2448 3580 3.876589 AACGCCATGAAGACGCCGT 62.877 57.895 0.00 0.00 0.00 5.68
2449 3581 2.677003 AAACGCCATGAAGACGCCG 61.677 57.895 0.00 0.00 0.00 6.46
2466 3598 0.902531 TGAAAAACCCAAACCCGCAA 59.097 45.000 0.00 0.00 0.00 4.85
2574 3708 1.267732 GCACAAGCAGCATCATCGTAC 60.268 52.381 0.00 0.00 41.58 3.67
2576 3710 0.675837 AGCACAAGCAGCATCATCGT 60.676 50.000 0.00 0.00 45.49 3.73
2577 3711 0.450583 AAGCACAAGCAGCATCATCG 59.549 50.000 0.00 0.00 45.49 3.84
2578 3712 1.202268 GGAAGCACAAGCAGCATCATC 60.202 52.381 0.00 0.00 45.49 2.92
2579 3713 0.815734 GGAAGCACAAGCAGCATCAT 59.184 50.000 0.00 0.00 45.49 2.45
2580 3714 1.579964 CGGAAGCACAAGCAGCATCA 61.580 55.000 0.00 0.00 45.49 3.07
2581 3715 1.136147 CGGAAGCACAAGCAGCATC 59.864 57.895 0.00 0.00 45.49 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.