>input_sequence_74141
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------ATGTCCAGATCTGGTAGCGGCAGTGGCAACACCACCATCTCCTCGTTGCAGGCCCTCCTTGCACACCT
GTGGATCGCGGTGTGCCGAGCAAGGAGGCTGGCG--------CCGGACCAGCGGACAGTGTACGCCCTCGTCGTCGGATT
CCGGGGCCGTGTGCATGGCTTACCGGTGGACTACATGGGCAATGCTGTGGCACGCGCTGAGG---CGGTGTCCACCGCCG
ACGAGATCCTAAAAGGAGGCCTGGGTTGGGCTGCATCCCTACTGAATAGACTGGTGGTGTCGTCCGACGAGGCGACTGAG
AGAGACAGGCACGCATCTTGGATCCAAACTCCTAGCTTCGCCGGAGTGTCGGCGCGCCCCACGGCCGCG---GCACTGGT
GGTGACGGGGGGTACGCGCTGGTTCGACGTGTACGGGAATGACTTCGGATGGGGCCGGCCGGTGGGCGTGCGGACTGGCT
CAGCCAACAAGACGGATGGGACGGCGACGGTGTACGAGGGCAGAGGTGGCGGAGGGAGCATGGATTTGGAGGTGTGCCTT
GCCCCGGAGGTGCTCGCCAGGCTGGTCGCCGACGAGGAGTTCATGAGCACGGTACGTAAGCTTGACCGATCATGTTAA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr2D_1_TraesCS2D01G050000
TAAAACCTAAGAGAGTAGTACATTGCAGTATTATTTTTTGTCTTGTAATAACTCCGCATTAACCAATGAAAAACAAATGC
ACACCGAGAAAATTACCAATTTCTGGCTCAGATTCCAAACCGGCTATTCAAAACACATTCATATATGTGCCCCAACCTGC
AGTCAAACCATACACACAATCTACTG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CTCCCGCAAGTGAAAGAGGCCGTGCGCGCTGTGGCAGCACAGCTGAACCAAGA
TGAACCATGTCCGC---ATCATGTCCCGGCACATGGTCCTGCCGGAGCCAACAACTTCGCTAGCGCCGGAGCCGGAGACG
ACCATCGACCTGACGCCATGGGATCTCCGGATGATCACCTTGGAGTACAGTCAGACGGGCATCCTCCTGCCCAAGCCTCC
CACCACGGGAGGACAGGGACACCACGCC---GTCGTCGAACGCCTTGCGTCGTCCTTTGCGTGCGCCCTGGGCCGGTTGT
ACCCCTAGGCCGGCCGCCTCGCCGTTGCGCCGGGGAGCAGCGTTGGCGGGAAGGGCGAGAGCATTGCCATCTCCCTCCAC
TGCAGCATGGAGGGAGCCGAGTTCGTCCAC--------------------------------------GCCGCTCTATAC
CCCGGGGGTGGTCCGGTCCTTCTTCCCTCTCGAGGGGCTCCTCGGCGTGGACGCCGCCGCGGGCTCCCACCTGCTCCTTG
CCGTGCAGATCACTGAGCTCGCCGACGGTGTCTTCATCGCCATGTCGCTTAACCATGTTGTCGGTGATGGGACGGCCTTC
TGGCAGTTCTTCAACACCTGGTCCAAGATCAGCCGTCAGAATGACGGAGT------CATCTCCTCGCCGCTACCGGTACA
CCGGAGGTGGC-CTTTTACGGCTGCCCTGTCCCGATCCCGCTGCCCTTCGGCAAGTTAGAGAACATCGTCAGCCAGAGTA
CTGATGAGATTGGGCACGCTTCGGTGGAGGAATGCTTCCTCCATTTCTCCGCGGAGAGCGTAAAGAAACTCAAAGCGAAG
GCCAACGCAGAGATGTCCAGATCTGGTAGCGGCAGTGGCAACACCACCATCTCCTCGTTGCAGGCCCTCCTTGCACACCT
GTGGATCGCGGTGTGCCGAGCAAGGAGGCTGGCG--------CCGGACCAGCGGACAGTGTACGCCCTCGTCGTCGGATT
CCGGGGCCGTGTGCATGGCTTACCGGTGGACTACATGGGCAATGCTGTGGCACGCGCTGAGG---CGGTGTCCACCGCCG
ACGAGATCCTAAAAGGAGGCCTGGGTTGGGCTGCATCCCTACTGAATAGACTGGTGGTGTCGTCCGACGAGGCGACTGAG
AGAGACAGGCACGCATCTTGGATCCAAACTCCTAGCTTCGCCGGAGTGTCGGCGCGCCCCACGGCCGCG---GCACTGGT
GGTGACGGGGGGTACGCGCTGGTTCGACGTGTACGGGAATGACTTCGGATGGGGCCGGCCGGTGGGCGTGCGGACTGGCT
CAGCCAACAAGACGGATGGGACGGCGACGGTGTACGAGGGCAGAGGTGGCGGAGGGAGCATGGATTTGGAGGTGTGCCTT
GCCCCGGAGGTGCTCGCCAGGCTGGTCGCCGACGAGGAGTTCATGAGCACGGTACGTAAGCTTGACCGATCATGTTAAGA
AGGTGTTGTGTTTTCTTTGAACAAGTGAATGGTGTGCTTTCTGCAAAACTTCCTGCACATACAGTCTTGCTGCAAGCTAA
AATGGAAATGATTATTACCATGTACTCCATCTGTAAGA----------CGTTTTTTTTTACACTAAATGTCTTAAATTAT
AAGATGGAGTAGTACTTAGTACATATTATC---------------GTTTAGTTCATGAGTCAGGACTTTGAAGTACGTGT
TCCTTTGTTATTTGTTTGCCAGACTTTACAACATGTCAGTCGGACCTCATGGCATGTATTCAAGTTATGAGGCATATAGC
ATACAAGATGTCAAGATGCACATCAGGCGGATCTTATGGTAGGTACGCATGCATGCTAAGAAGATTAATTGTGCAAGAAA
TTGTCTTTGCATGATGTCATTTGACAACACATACTGTATTGTAAAATGTCGAGAATTAAATGCAGTCCAGATTAGTGAGG
CTAGGTTCTTGGTCAACGATTTTATCATTTTCCTTAAGAGAAGTATTAACGTTGATGTTGCCCTAATGCTGTATTGTCCG
AGAATTGTCTTTCGAGGGGTAGAAAACATTTCCATTTTTCTGACATGTTTAAAACACTTTCAGCTCTAGGATCGGGGTTA
CATTCTTTTGCATCTACTCCATTCCTTCCTAAATATAAGTGAATCTACACTCTGAACTATGTCTATATATGTCTGTATGT
AGTCCATATAGAAATCTCTAGAAATACTTATATTTAGACACGGCAAGGCCAATCTTCTCACCGGCGCCTGGAAGGAAGGA
ACTCCGGCGAGCAATACTCGGTGCTGCGGAGAGAAACGGCGCCTGGAAGGAAGGTTTCAACGGCGTCTTCATGGCGTTTG
CGGGTTTGGGTTTTTCAATTCAAGAATTCCGGCTTCACTGGGCC--CTCGTCAGAGCTGTCCTCCAGACTGGGCTTATTT
ATCGTTTCCGCTTGGGCCTGCTTCTACGTACGATGATGCTGCTTGTGCTTCCGGACAATTGGGCC
>chr2A_1
TAAAAGCGAAGAGAGTAGTACATTGCAGTATTCTTTTCTGTCTTGTAATAACTCCGGATTAACCAATGAAAAACAAATGC
ACACCGAGAAAATGACCAATTTCTGGCTCAGATTCGAAACCGGCTATTCAAAACACATTCATAT--GTGCTCCAACCTGC
AGTCAAACCTTACACACAATCTACACACAATGTTTCAAAAAACGAAAACACTAACGCTCACACGTGTGGGCGTCTGGCAA
CTTGCCCACACGCATGGATCCTCGTCCAACCAATTCTGCACGAATCTTGGCGCGTTCTACAGTTTATGTGTGCCATGTAG
GACTAAGCTGGTGTGTGGGCATTCATCCGGTCGCCCACACGTCCTTTTTCACCACACTGGGGGCTGGTGTGTGGGCGTTT
AGCAATTCGCCCACACACCAGTTTTCACGCACGCAGAGGAGGCTGGTGTGTGGGCGTTTATCACTTCGCCCACACGCCCG
TCTCCTCGCCCACACCCAAAGCTGGCAGTTGCCATGTGTTTCTGTAGGGTACATAGCAACTGCCCTAGCTTTGTTTGTAA
CTAGATGACAACTCTCTTTTACCCAAGTTGCCATGTGTTTTTGCATGGTACATGGCAACTGCCCTAGCGTGCACGTAAGC
AGATGACAACTCTTTCTCTTTACATGGCAACTGCCCTAGCGTGCTTGTGAGCACATGGCAACTCTCTCTTTTACCCGAAC
ATATTTTTTTGCCATGCCTTTTTGTAGTTCTACATGGCAACTGCCTAGTGTTAATGGGTGGCAACTCCTAAAGTTTTGAA
ATCATGGCAACTGCAGTAGACTAGATCATACATGGCAACTGCAGTTGAGCAAACATGGCAACTGTAGTTGTCCGACATGG
CAACCGAAGTTCAGCGACATGGCAACTACAGTTATACGAACATGGATAAGGGTCTAGACCATGGCAACTGCTGGACGCGC
TGTGACTGTCACGTAGGGCGTGCGGGACCATGAGGTACGAGGCCTGACGTACAGGGCGTGTGGGCGTTATCTGTTTCGCC
CACACGCACGCGTGTGAGACGGATCGGGAGGGGAAAAAGGTGTGTGGGCATTACTTGTTTTGCCCACACGTAGGTGTGTG
GGCTGTTCCTCTTATACACCACACAAAATGTGTGGGTAGATCCCCTAACGCCCACACGTGTGACATTTATCGGCGTCCTT
CAGAAAAACCTTACACACAATCTACAACTCCCGCAACTGAAAGAGGCCGTGTGAG--GTGGCAGCACAGCTGAACCAAGA
TGAACCATGTTCGC---ATCATGTCCCGGCACATGGTCCTGCCGGAGCCAACAACTTCGCCAGCGCCGGAGCCGGAGACG
ACCATCGACCTGACG-----------------------------------TCAGACGGGCATCCTCCTGCCCAAGCCTCC
CACCACGGGAGGACAGGGACACCACGCC---GTCGTCGAACGCCTTGCGTCGTCCTTTGCGTGCGCCCTGGGCCGGTTCT
ACCCCTACGCCGGCCGCCTCGCCGTTGCGCCGGGGAGCAGCGTTGGCGGGAATGGCGAGAGCATCGCCATCTCCCTCCGC
TGCCGCATGGAGGGAGCCGAGTTCGTGCACGCCGTGGCGCCCGCCGTCACTGTGGACGACGTCATCACGCCACTCTATAC
CCCGGGGGTGGTCCGGTCCTTCTTCCCTCTCGACGGGCTCCTCGGCGTGGACGCCGCCGCGGGCTCCCACCCGCTCCTTG
CCGTGCAAATCACCGAGCTCGCCGACGGTGTCTTCATCGCCATGTCTCTCAACCATGCCGTCGGCGATGGGACGGCCTTC
TGGCAGATCTTCAACACCTGGTCCAAGATCAGCCGTCAGCATGATGGGCT------CATCTCCTCGCCGTTACCGGTGCA
CCGGAGGTGGTTCTTTGACGGCTGCCCTGTCCCGATCCCTCTGCCCTTCGGCAAGTTAGAGGACATCGTCAGCTAGAATA
CTGATGAGATTGGGCACGCTTCGGTGGAGGAATGCTTCCTCCACTTCTCCACGGAGAGCGTAAAGAAACTCAAAGCGAAG
GCCAACGCAGAGATTG--------------------GGCAGCACCACCATCTCCTCATTGCAGGCCCTCCTTGCGCACCT
GTGGATCGCGGTGTGCAGAGCAAGGAGGCTGGCG--------CCAGACCAGCGGATAGTGTACACCCTTCTCGTCGGATT
CCGGGGCCGCCTGCATGGCATACCGGTGGACTACGTGGGAAACGCTGTGGCACGAGTTGAGG---CGGTGTCCACCGCGG
ACGAGATCCTCAAAGGGGGGCCGGGTTGGGCTGCGTCCCTACTGAATAGGATGGTGGCGTCGTCCGACTAGGCGACTGAG
AGAGACAGGCACGCATCTTGGATCCAAACTCCTACCTTCGCCGGAGTGTCGGCGCGCCCCACGGCCACG---GCACTGGT
GGTGACGGGGGGCACGCGGTGGTTCGACGTGTACGGGAATGACTTCGGATGGGGCCGCCCGGTGGGCATGCAGACTGGTT
CAGCCAACAAGACGGATGGGACGGCGACGGTGTACGAGGGCAGAGGTGGCGGAGGGAGCATGGATTTGGAGGTGTGCCTT
GCCCCGGAGGTGCTCGCCAGGCTGGTCGCCGACGAGGAGTTCAT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr3D_229
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------CTGAAGCAAGA
TGAGCCATGTCGTCCAGATCGTGTCCCGGCGCATGGTCCTGCCGGAGCCGACGCCTTGGCTGCCGTCGGAGCCAGAGACG
ACCATCGACCTGACGCCATGGGACCTCCGGATGATCACCGTGGAGTACACCCAGACGGGCGTCCTCCTGCCCAAGCCCCC
CGCCACGGGAGAGCACGGTCACCACGCCCCTGTCGTCGAACGCCTCACGTCGTCCTTCGCGCGCGCGCTGGGCCGCTTCT
ACCCCTACGCCGGCCGCCTTGTCGTCGCGCCG------------GGCGGGGAGGGTGGGAGCATCTCCGTATCGCTCCGC
TGCAGCATGGAGGGCGCCGAGTTCGTCCACGCCGTGGCTCCCGGCGTCACCGTGGCCGACGTCGTCGCGCCGCTGTACAC
CCCCGTGGCGGTCCGGTCCTTCTTCCCCCTCGACGGGCTGTTCGGCGTGGACACCGTGGCGGGCTCCCACCCGGTCCTGA
CCGCGCAGGTCACCGAGCTCGACGACGGTGTCTTTGTCGCCATGTCGCTCAACCACGTGGTCGGTGACGGGACGGCCTTC
TGGCATTTCTTCAACACCTGGTCTGAGATCAGCCGTCGTGATACTGACGATGCCGCCATCTCCTCGCCGCTGCCGGTGCA
CCGCAGGTGGTTCCTTGATGGCTGCCGTGTCCCGATCCCTCTGCCATTCGCCAAACTGGAGGATATCGTCAGCTATGGGC
ACCCATCATCGGTGC------AGCCGCAGGACTGCTTCCTCCATTTCTCCGCGGAGAGCGTAAAGAAGCTCAAAGCGAAG
GCGAACGCCGAGGCGTC------------CGGCACCGGCAGCACCACCATCTCCTCCTTGCAGGCCCTGCTGGCGCACCT
GTGGGTCGCGGTGAGCCGAGCCAGGAGGCTGGCGGCCTGGCGCCGGACCAGAGCACAACGTACGTCCTCCTTGTCGGATC
CCGGGGCCGCGTGACCGGCATACCAGCGGGCTATGCGGGCAACGCCGTGGCACGCGCCGAGG---CGACGTCCACGGCCG
GCGAGATCCTAGGGAGGGGTCTGGGCTGGGCCGCGTCGCTGCTGAACAAAATGGTGGCGTCGCTCGACGAGGCGAGCGAG
AGTGACAGGCTGGCGTCATGGGCGGGTAACCCGAGCTTCGCGTGCACGTCGTCGCCGCCCCT------G---GCGCTGGT
GGTGACCGGGAACTCGCCGCGGTTCGACGTGTACGGGAACGACTTCGGGTGGGGCCGGCCGGTGGCCGTGCGGCGCAGCT
CGGCGAACAAGACGGACGGGACGGCGACGGTGTTCGAAGGTAGGGGCGGCGGTGGGAGCATGGCCCTGGAGGAGTGCCTC
GCCCCGGAGGTGCTCGCGAGGCTCGTCGCCGACGACGAGTTCATGAGCGCGGT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr3A_584
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GCCGCTGTACAC
CCCCGTGGTGGTCCGGTCCTTCTTCCCGCTCGACGGGCTGCTCGGCGTGGACGCCGTGGCGGGCTCCCACCCGGTCCTGG
CCGCGCAGGCCACCGAGCTCACTGACGGTGTCTTTGTCGCCATGTCGCTCAACCACGGTGTTGGCGACGGGACGTCCTTC
TGGCACCTCTTCAACACCTGGTCCGAGATCAGCCGTCGTCAGAGTGACGCCGCCGCCATCTCCTCGCCACTACCGGTGCA
CCGTAGGTGGTTCCTTCACGGCTGCCGTGTCCCGATCCCTCTGC-ATTCGCCAAACTGGAGGACATTGTCAGCTACGGGC
ACCTATCATTGGTGGCAGTGGAGCCGCAGGACTGCTTCCTCCATTTCTCCGCGGAGAGCGTAAGGAAGCTCAAAGCGAAG
GCGAACGCCGAGGCATC------------CGGCAGCGGCAGCGCCACCATCTCCTCGTTGCAGGCCCTGCTGGCGCACCT
GTG-GTCGCGGTGTGCCGAGCGAGGAGGCTGGCG--------CCGGACCACAGCACAACGTACGTCCTCCTCGTCGGATC
CCGGGGCCGCTTGACCGACATACCGTCGGGCTACGCGGGCAACGCCGTGGCACGCGCCGAGG---CGACGTCCACGGCCG
GCGAGATCCTGGAGAGGGGTCTGGGCTGGGCCGCGTCGCTGTTGAACAAAATGGTGGCGTCGCTCGACGAGGCGAGCGAG
AGGGACAGGCTCGCGTCATGG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr1D_930
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CGGTGCATGAGTGCTTTCTCCATTTCCCGGCGGAGAGAGTAAAAGAGCTCAAGGCGAAG
GCGAACGCGGAGATGGC------------CGGCACCGCCACCACCACAATCTCCTCGCTGCAGGCCCTGCTCGCGCACCT
GTGGCGCGCGGTGTGCCGAGCCCGGCGGCTCGCG--------CCGGAGCAGAAGATGGCGTACTACCTCCTCGTCGGATG
CCGTGGCCGCGTCGACGGCATACGCGCGTCGTACGCGGGCAATGCCGTGGTGGCGCACGCGAGCACGGCATCGCCCGCCG
GCGAGATCCTCGGCAGGGGGCTGGGCTGGGCGGCGTGGCTCCTTAACAGGGCCGTGGCGTCGTTTGCGGAGGCGAGCGCG
AGGGAGAAGCTCGCGCGCTGGCCCCTGGAGCCCAGCTTCTCGTCCCTGCCCGCTCTGGTGGCGACCGCGCACGCCATGGT
GCTGACGGGGAGCTCGCCGAGGTTCGACGTGTACGGGAACGACTTCGGCTGGGGCGCGCCGGTGGCCGTCCGCAGCGGCC
CGGCCAACAAGCTGGACGGGAAGGCGACGGTGTACGAGGGGCGAGGCGGCCAAGGGAGCATGGCGCTGGAGGTGTGCCTC
GCGCCGGAGGCGCTCGCGAGGCTGGTCGCCGACGAGGAGTTCATGAGCGCGGT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr2A_1574
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TTCATGAGCACGGTACGTAAGCTTGACCGATCATGTTAAGA
AGATGTTGTGTTTTGTTTGAACAAGTGAATGGTGTGCTTTCTGTAAAACTGCCTGCACATACAGTCTTGCTGCAAGCTAA
AATGGAAATGATTATAACCATGTACTCCCTCCGTCCCATAACATCATGCGTTTTTTTGACTTACGTTATGAGACGT----
------GAGTAGTACTTACATATCGTTGCAACTTTCAAACATCCAGTATAGTTCATTAGTCAGGACTCTGAAGTACGTGT
TCCTTTGTTATTTGTTTGCCAGACTTTGCAACATGTCAGTCGGACCTCATGGCATGTATCCAAGTTATGAGATATATAGC
GTACAAGATGTCAAGATGCACATCAGGCGGATCTTATGGTAGGTACGCATCCATGCTTCAT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GGCGTCTTCATGGCGTCTG
CGGGTTTGGGTTTTTCAATTCAAGAATTCCGGCTTCACTGGGCCCACTCGTCAGAGCTGTCCTCCAGACTGGGCTTATTT
ATCGTTTCCGCTTGGGCCTGCTTCTACAT------ATGCTGCTTGTGCTTCCGGACGCTTGGGCC
>SNPs
-----S-S------------------------S----S------------------S-----------------------
-------------S---------------------S----------------------------SS----S---------
---------S--------------SS------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S--------------S-S-SS-----------------------
--------------------------------------------------------------------------------
-----------------------S---------------S---------S------------------------------
------------------------------------------------------------------------------S-
-------S--------------------------------------------------------S-------------S-
--------------------------------------------------------------------------------
---------------------------------S-------------------------------------S--------
-------------S-----------------------------------S------------------------------
---------------------------------------S----S--S-----------------------------S--
----------S-----S----------------------S---------------------S-----------S------
--------------------------------------------------------------------------------
-----------------SSSSSSSSSSSS------S----S---------------------------------S-----
---------------------------------------------------------------------S----------
---------S---------S--------------S---------------------------------------------
----------------S--S--------------S---------------S------S----------------------
--------------------------------------------------------------------------------
------------S-----S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------S----------------------------S------S-----------------------------
---------------S------------S--S--SSS--------------------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSS------------SSSSSSS--SSS-----------------S--------S----------S------------
---------------------------S-------------------------------S-----------SS-------
S-------------------------------------------------S------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------S--
--------------------------------------------------------------------------------
---------------------------S-SSSSSS---------------------SS-------
>forward_1810
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TCTTCATCGCCATGTCGCTT------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_3506
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GCCTGGAAGGAAGGA
ACTCC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
