Multiple sequence alignment - TraesCS2B01G572500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G572500 chr2B 100.000 2576 0 0 1 2576 762215287 762212712 0.000000e+00 4758.0
1 TraesCS2B01G572500 chr2B 80.441 363 49 16 1765 2108 762207712 762207353 9.150000e-65 257.0
2 TraesCS2B01G572500 chr2A 86.843 1999 129 74 177 2110 753117003 753115074 0.000000e+00 2111.0
3 TraesCS2B01G572500 chr2A 85.965 114 9 5 82 191 753117129 753117019 5.820000e-22 115.0
4 TraesCS2B01G572500 chr2A 82.609 92 15 1 2131 2222 753114570 753114480 2.120000e-11 80.5
5 TraesCS2B01G572500 chr2D 91.104 933 56 13 967 1880 621405291 621404367 0.000000e+00 1238.0
6 TraesCS2B01G572500 chr2D 86.231 719 45 20 162 844 621406057 621405357 0.000000e+00 730.0
7 TraesCS2B01G572500 chr2D 86.842 114 10 3 1999 2110 621404284 621404174 3.480000e-24 122.0
8 TraesCS2B01G572500 chr2D 83.696 92 15 0 2131 2222 621403632 621403541 1.270000e-13 87.9
9 TraesCS2B01G572500 chr6D 83.217 143 16 5 1054 1192 265880922 265881060 9.680000e-25 124.0
10 TraesCS2B01G572500 chr6B 87.387 111 11 2 1060 1167 507404813 507404923 9.680000e-25 124.0
11 TraesCS2B01G572500 chr6A 82.517 143 17 5 1054 1192 376479799 376479937 4.500000e-23 119.0
12 TraesCS2B01G572500 chr1D 84.058 69 10 1 2408 2476 193994621 193994688 5.950000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G572500 chr2B 762212712 762215287 2575 True 4758.000000 4758 100.00000 1 2576 1 chr2B.!!$R2 2575
1 TraesCS2B01G572500 chr2A 753114480 753117129 2649 True 768.833333 2111 85.13900 82 2222 3 chr2A.!!$R1 2140
2 TraesCS2B01G572500 chr2D 621403541 621406057 2516 True 544.475000 1238 86.96825 162 2222 4 chr2D.!!$R1 2060

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
916 990 0.107703 CGCCTTCTGGTGATAGCCAA 60.108 55.0 0.0 0.0 46.34 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2511 3185 0.036388 CGGTTGACACCAGTGCCTAT 60.036 55.0 0.0 0.0 44.53 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 1.948104 TTGAATATCTTCCGTGCCCG 58.052 50.000 0.00 0.00 0.00 6.13
22 23 0.531974 TGAATATCTTCCGTGCCCGC 60.532 55.000 0.00 0.00 0.00 6.13
23 24 1.227853 AATATCTTCCGTGCCCGCC 60.228 57.895 0.00 0.00 0.00 6.13
24 25 1.978455 AATATCTTCCGTGCCCGCCA 61.978 55.000 0.00 0.00 0.00 5.69
25 26 2.660258 ATATCTTCCGTGCCCGCCAC 62.660 60.000 0.00 0.00 41.15 5.01
31 32 4.063967 CGTGCCCGCCACAGTAGA 62.064 66.667 5.49 0.00 44.91 2.59
32 33 2.345991 GTGCCCGCCACAGTAGAA 59.654 61.111 0.26 0.00 44.06 2.10
33 34 2.033194 GTGCCCGCCACAGTAGAAC 61.033 63.158 0.26 0.00 44.06 3.01
34 35 2.345991 GCCCGCCACAGTAGAACA 59.654 61.111 0.00 0.00 0.00 3.18
35 36 1.741770 GCCCGCCACAGTAGAACAG 60.742 63.158 0.00 0.00 0.00 3.16
36 37 1.079127 CCCGCCACAGTAGAACAGG 60.079 63.158 0.00 0.00 0.00 4.00
37 38 1.741770 CCGCCACAGTAGAACAGGC 60.742 63.158 0.00 0.00 41.86 4.85
38 39 1.293498 CGCCACAGTAGAACAGGCT 59.707 57.895 0.00 0.00 43.07 4.58
39 40 0.737715 CGCCACAGTAGAACAGGCTC 60.738 60.000 0.00 0.00 43.07 4.70
40 41 0.610687 GCCACAGTAGAACAGGCTCT 59.389 55.000 0.00 0.00 42.01 4.09
41 42 1.825474 GCCACAGTAGAACAGGCTCTA 59.175 52.381 0.00 0.00 42.01 2.43
42 43 2.159170 GCCACAGTAGAACAGGCTCTAG 60.159 54.545 0.00 0.00 42.01 2.43
43 44 2.159170 CCACAGTAGAACAGGCTCTAGC 60.159 54.545 0.00 0.00 41.14 3.42
57 58 3.873910 GCTCTAGCCCACAAGTAAATGA 58.126 45.455 0.00 0.00 34.31 2.57
58 59 4.455606 GCTCTAGCCCACAAGTAAATGAT 58.544 43.478 0.00 0.00 34.31 2.45
59 60 4.274459 GCTCTAGCCCACAAGTAAATGATG 59.726 45.833 0.00 0.00 34.31 3.07
60 61 5.674525 CTCTAGCCCACAAGTAAATGATGA 58.325 41.667 0.00 0.00 0.00 2.92
61 62 6.061022 TCTAGCCCACAAGTAAATGATGAA 57.939 37.500 0.00 0.00 0.00 2.57
62 63 5.880332 TCTAGCCCACAAGTAAATGATGAAC 59.120 40.000 0.00 0.00 0.00 3.18
63 64 3.763897 AGCCCACAAGTAAATGATGAACC 59.236 43.478 0.00 0.00 0.00 3.62
64 65 3.427503 GCCCACAAGTAAATGATGAACCG 60.428 47.826 0.00 0.00 0.00 4.44
65 66 4.006989 CCCACAAGTAAATGATGAACCGA 58.993 43.478 0.00 0.00 0.00 4.69
66 67 4.142687 CCCACAAGTAAATGATGAACCGAC 60.143 45.833 0.00 0.00 0.00 4.79
67 68 4.435518 CCACAAGTAAATGATGAACCGACG 60.436 45.833 0.00 0.00 0.00 5.12
68 69 3.124636 ACAAGTAAATGATGAACCGACGC 59.875 43.478 0.00 0.00 0.00 5.19
69 70 2.967362 AGTAAATGATGAACCGACGCA 58.033 42.857 0.00 0.00 0.00 5.24
70 71 2.930040 AGTAAATGATGAACCGACGCAG 59.070 45.455 0.00 0.00 0.00 5.18
89 90 1.076485 TAGAGTACTGACCGCCCCC 60.076 63.158 0.00 0.00 0.00 5.40
107 108 1.657181 CAACAAAACGCAGACGGCC 60.657 57.895 0.00 0.00 46.04 6.13
117 118 2.351276 AGACGGCCGGCTGAAATT 59.649 55.556 41.14 19.86 28.47 1.82
118 119 1.745489 AGACGGCCGGCTGAAATTC 60.745 57.895 41.14 26.85 28.47 2.17
132 133 7.117454 CGGCTGAAATTCGTAATTTACTACTG 58.883 38.462 5.11 0.00 40.97 2.74
134 135 6.905609 GCTGAAATTCGTAATTTACTACTGCC 59.094 38.462 5.11 0.00 40.97 4.85
175 179 1.747745 GCCCGTAATTTCCACCGCT 60.748 57.895 0.00 0.00 0.00 5.52
186 220 2.093306 TCCACCGCTGAATACACTTG 57.907 50.000 0.00 0.00 0.00 3.16
356 413 2.136196 TTGGATTTGAACGCCACCGC 62.136 55.000 0.00 0.00 38.22 5.68
407 465 2.234168 AGTCGATCCGATCCGATCTAGA 59.766 50.000 18.10 9.08 38.42 2.43
408 466 2.605818 GTCGATCCGATCCGATCTAGAG 59.394 54.545 18.10 6.46 38.42 2.43
411 469 3.799963 CGATCCGATCCGATCTAGAGTAG 59.200 52.174 18.10 1.96 37.16 2.57
577 640 2.202453 GCGAAGACCGGTCTCGTC 60.202 66.667 35.16 29.50 39.39 4.20
594 662 1.000993 TCTGGGAGGAGAGTGAGGC 59.999 63.158 0.00 0.00 0.00 4.70
654 726 3.055580 CTGAGCTATCCCTCCCGC 58.944 66.667 0.00 0.00 0.00 6.13
714 786 1.796017 CCTCCTCCCCCTTCTTCTAC 58.204 60.000 0.00 0.00 0.00 2.59
780 852 2.270527 GCCTTCTCCCAGCTCCAC 59.729 66.667 0.00 0.00 0.00 4.02
838 912 3.144506 CAAGCCTTTCTCAAGCTCAGAA 58.855 45.455 4.32 4.32 0.00 3.02
843 917 2.175878 TTCTCAAGCTCAGAACAGGC 57.824 50.000 4.32 0.00 0.00 4.85
844 918 1.051008 TCTCAAGCTCAGAACAGGCA 58.949 50.000 0.00 0.00 0.00 4.75
845 919 1.001746 TCTCAAGCTCAGAACAGGCAG 59.998 52.381 0.00 0.00 0.00 4.85
879 953 3.188786 GGCCAGATCACACGCGTC 61.189 66.667 9.86 0.00 0.00 5.19
880 954 3.188786 GCCAGATCACACGCGTCC 61.189 66.667 9.86 0.00 0.00 4.79
883 957 1.807165 CAGATCACACGCGTCCCAG 60.807 63.158 9.86 0.00 0.00 4.45
884 958 3.188786 GATCACACGCGTCCCAGC 61.189 66.667 9.86 0.00 0.00 4.85
885 959 3.649277 GATCACACGCGTCCCAGCT 62.649 63.158 9.86 0.00 34.40 4.24
886 960 3.649277 ATCACACGCGTCCCAGCTC 62.649 63.158 9.86 0.00 34.40 4.09
899 973 4.443266 AGCTCGGACAAGCCTCGC 62.443 66.667 0.00 0.00 43.56 5.03
901 975 3.764466 CTCGGACAAGCCTCGCCT 61.764 66.667 0.00 0.00 0.00 5.52
904 978 2.665603 GGACAAGCCTCGCCTTCT 59.334 61.111 0.00 0.00 0.00 2.85
916 990 0.107703 CGCCTTCTGGTGATAGCCAA 60.108 55.000 0.00 0.00 46.34 4.52
959 1033 2.202676 CGGAAGCAGACGAGGAGC 60.203 66.667 0.00 0.00 0.00 4.70
960 1034 2.705821 CGGAAGCAGACGAGGAGCT 61.706 63.158 0.00 0.00 41.03 4.09
964 1038 0.682855 AAGCAGACGAGGAGCTAGCT 60.683 55.000 19.45 19.45 37.70 3.32
965 1039 1.101049 AGCAGACGAGGAGCTAGCTC 61.101 60.000 32.65 32.65 42.04 4.09
971 1045 0.667993 CGAGGAGCTAGCTCAAGGAG 59.332 60.000 38.32 23.14 44.40 3.69
987 1061 3.537206 GAGTGAAGCCACAGCCGGT 62.537 63.158 1.90 0.00 45.54 5.28
1251 1334 2.359967 CCTCGTCTCCTTCCCCACC 61.360 68.421 0.00 0.00 0.00 4.61
1533 1616 0.471211 TGTTCGACCTCAACCTCCCT 60.471 55.000 0.00 0.00 0.00 4.20
1578 1661 1.067250 GCTGCGGCTCTTCTAGGAG 59.933 63.158 11.21 0.00 36.50 3.69
1629 1712 1.227999 TGTGCACCAAAGCTAGCGAC 61.228 55.000 15.69 0.00 34.99 5.19
1633 1716 1.266989 GCACCAAAGCTAGCGACTTTT 59.733 47.619 9.55 1.11 35.19 2.27
1634 1717 2.287608 GCACCAAAGCTAGCGACTTTTT 60.288 45.455 9.55 0.70 35.19 1.94
1694 1780 3.007723 AGACAGATGATGTGTGCAAGAGT 59.992 43.478 0.00 0.00 44.17 3.24
1695 1781 3.748083 ACAGATGATGTGTGCAAGAGTT 58.252 40.909 0.00 0.00 41.91 3.01
1751 1844 5.848036 CGATAAGAATTGCGGTTGATTGATC 59.152 40.000 0.00 0.00 0.00 2.92
1756 1860 1.298602 TGCGGTTGATTGATCGATGG 58.701 50.000 0.54 0.00 0.00 3.51
1757 1861 1.134551 TGCGGTTGATTGATCGATGGA 60.135 47.619 0.54 0.00 0.00 3.41
1758 1862 1.528586 GCGGTTGATTGATCGATGGAG 59.471 52.381 0.54 0.00 0.00 3.86
1760 1864 3.657634 CGGTTGATTGATCGATGGAGAT 58.342 45.455 0.54 0.00 0.00 2.75
1761 1865 4.060900 CGGTTGATTGATCGATGGAGATT 58.939 43.478 0.54 0.00 0.00 2.40
1763 1867 5.559608 CGGTTGATTGATCGATGGAGATTTG 60.560 44.000 0.54 0.00 0.00 2.32
1764 1868 5.278169 GGTTGATTGATCGATGGAGATTTGG 60.278 44.000 0.54 0.00 0.00 3.28
1765 1869 4.392047 TGATTGATCGATGGAGATTTGGG 58.608 43.478 0.54 0.00 0.00 4.12
1768 1872 0.111253 ATCGATGGAGATTTGGGGCC 59.889 55.000 0.00 0.00 0.00 5.80
1770 1874 0.395586 CGATGGAGATTTGGGGCCAA 60.396 55.000 4.39 0.00 33.51 4.52
1771 1875 1.755265 CGATGGAGATTTGGGGCCAAT 60.755 52.381 4.39 0.00 35.70 3.16
1773 1877 2.340721 TGGAGATTTGGGGCCAATTT 57.659 45.000 4.39 0.00 35.70 1.82
1774 1878 2.630232 TGGAGATTTGGGGCCAATTTT 58.370 42.857 4.39 0.00 35.70 1.82
1799 1903 4.024048 TGCGGTCTCAAGAGTTGATTTTTC 60.024 41.667 0.00 0.00 39.30 2.29
1802 1906 5.106908 CGGTCTCAAGAGTTGATTTTTCCTC 60.107 44.000 0.00 0.00 39.30 3.71
1829 1933 5.345702 CACTTGGATGCAACTTTATGGATG 58.654 41.667 0.00 0.00 30.89 3.51
1920 2024 6.020440 TCGAATACGACCGCTAAATTGTTTAG 60.020 38.462 5.34 5.34 43.81 1.85
1922 2026 8.184158 CGAATACGACCGCTAAATTGTTTAGTG 61.184 40.741 13.38 13.38 44.76 2.74
1928 2036 3.119637 CGCTAAATTGTTTAGTGGTGGGG 60.120 47.826 12.77 0.00 45.42 4.96
1943 2051 3.591527 TGGTGGGGTTTGAGATGTTCTAT 59.408 43.478 0.00 0.00 0.00 1.98
1946 2056 5.105756 GGTGGGGTTTGAGATGTTCTATTTG 60.106 44.000 0.00 0.00 0.00 2.32
1948 2058 4.402474 GGGGTTTGAGATGTTCTATTTGGG 59.598 45.833 0.00 0.00 0.00 4.12
1951 2061 4.591321 TTGAGATGTTCTATTTGGGCCT 57.409 40.909 4.53 0.00 0.00 5.19
1959 2069 4.202631 TGTTCTATTTGGGCCTAGTGGTTT 60.203 41.667 4.53 0.00 35.27 3.27
1965 2075 4.601406 TTGGGCCTAGTGGTTTATTCAT 57.399 40.909 4.53 0.00 35.27 2.57
1971 2081 6.295632 GGGCCTAGTGGTTTATTCATTGTTTT 60.296 38.462 0.84 0.00 35.27 2.43
1978 2088 7.226523 AGTGGTTTATTCATTGTTTTCTTTGCC 59.773 33.333 0.00 0.00 0.00 4.52
1980 2090 6.484977 GGTTTATTCATTGTTTTCTTTGCCCA 59.515 34.615 0.00 0.00 0.00 5.36
1983 2093 4.751767 TCATTGTTTTCTTTGCCCACTT 57.248 36.364 0.00 0.00 0.00 3.16
1984 2094 5.096443 TCATTGTTTTCTTTGCCCACTTT 57.904 34.783 0.00 0.00 0.00 2.66
1995 2108 2.081585 GCCCACTTTCCTCCCTGGTT 62.082 60.000 0.00 0.00 37.07 3.67
2025 2160 3.674997 TGAGGGGTTTCTTCTGAATTCG 58.325 45.455 0.04 0.00 31.56 3.34
2043 2181 4.600692 TTCGAACTGGACTGAAGATTCA 57.399 40.909 0.00 0.00 35.57 2.57
2056 2194 5.479375 ACTGAAGATTCATCTTTGCCAACAT 59.521 36.000 3.54 0.00 46.47 2.71
2058 2196 7.177216 ACTGAAGATTCATCTTTGCCAACATTA 59.823 33.333 3.54 0.00 46.47 1.90
2059 2197 7.541162 TGAAGATTCATCTTTGCCAACATTAG 58.459 34.615 3.54 0.00 46.47 1.73
2092 2230 7.074502 CGGTCAGTAACGAGATTAATACCTAC 58.925 42.308 0.00 0.00 0.00 3.18
2110 2248 2.302587 ACGGGTCCACCAATTTGAAT 57.697 45.000 0.00 0.00 40.22 2.57
2112 2250 3.086282 ACGGGTCCACCAATTTGAATAC 58.914 45.455 0.00 0.00 40.22 1.89
2113 2251 2.425668 CGGGTCCACCAATTTGAATACC 59.574 50.000 0.00 0.52 40.22 2.73
2114 2252 2.425668 GGGTCCACCAATTTGAATACCG 59.574 50.000 0.00 0.00 39.85 4.02
2115 2253 2.425668 GGTCCACCAATTTGAATACCGG 59.574 50.000 0.00 0.00 35.64 5.28
2116 2254 3.086282 GTCCACCAATTTGAATACCGGT 58.914 45.455 13.98 13.98 0.00 5.28
2117 2255 3.508402 GTCCACCAATTTGAATACCGGTT 59.492 43.478 15.04 0.00 0.00 4.44
2122 2260 4.589374 ACCAATTTGAATACCGGTTTGGAA 59.411 37.500 29.74 13.73 42.00 3.53
2123 2261 5.167845 CCAATTTGAATACCGGTTTGGAAG 58.832 41.667 22.16 0.82 42.00 3.46
2125 2263 6.451393 CAATTTGAATACCGGTTTGGAAGAA 58.549 36.000 15.04 0.00 42.00 2.52
2126 2264 6.658188 ATTTGAATACCGGTTTGGAAGAAA 57.342 33.333 15.04 3.85 42.00 2.52
2129 2803 7.948034 TTGAATACCGGTTTGGAAGAAATAT 57.052 32.000 15.04 0.00 42.00 1.28
2134 2808 5.572252 ACCGGTTTGGAAGAAATATTACCA 58.428 37.500 0.00 0.00 42.00 3.25
2197 2871 7.047891 TGCGAGTTCTCTATATTCAAACCAAT 58.952 34.615 0.00 0.00 0.00 3.16
2198 2872 8.201464 TGCGAGTTCTCTATATTCAAACCAATA 58.799 33.333 0.00 0.00 0.00 1.90
2215 2889 3.181397 CAATAAATGGGAACGCAAGCTG 58.819 45.455 0.00 0.00 45.62 4.24
2233 2907 2.418368 TGCCAAAGCATATCCGAGTT 57.582 45.000 0.00 0.00 46.52 3.01
2234 2908 2.722094 TGCCAAAGCATATCCGAGTTT 58.278 42.857 0.00 0.00 46.52 2.66
2235 2909 3.088532 TGCCAAAGCATATCCGAGTTTT 58.911 40.909 0.00 0.00 46.52 2.43
2236 2910 3.509575 TGCCAAAGCATATCCGAGTTTTT 59.490 39.130 0.00 0.00 46.52 1.94
2237 2911 4.702612 TGCCAAAGCATATCCGAGTTTTTA 59.297 37.500 0.00 0.00 46.52 1.52
2238 2912 5.359576 TGCCAAAGCATATCCGAGTTTTTAT 59.640 36.000 0.00 0.00 46.52 1.40
2239 2913 6.544197 TGCCAAAGCATATCCGAGTTTTTATA 59.456 34.615 0.00 0.00 46.52 0.98
2240 2914 6.856426 GCCAAAGCATATCCGAGTTTTTATAC 59.144 38.462 0.00 0.00 39.53 1.47
2241 2915 7.069569 CCAAAGCATATCCGAGTTTTTATACG 58.930 38.462 0.00 0.00 0.00 3.06
2242 2916 7.042321 CCAAAGCATATCCGAGTTTTTATACGA 60.042 37.037 0.00 0.00 0.00 3.43
2243 2917 7.639162 AAGCATATCCGAGTTTTTATACGAG 57.361 36.000 0.00 0.00 0.00 4.18
2244 2918 6.978338 AGCATATCCGAGTTTTTATACGAGA 58.022 36.000 0.00 0.00 0.00 4.04
2245 2919 7.431249 AGCATATCCGAGTTTTTATACGAGAA 58.569 34.615 0.00 0.00 0.00 2.87
2246 2920 7.924412 AGCATATCCGAGTTTTTATACGAGAAA 59.076 33.333 0.00 0.00 0.00 2.52
2247 2921 8.002665 GCATATCCGAGTTTTTATACGAGAAAC 58.997 37.037 0.00 0.00 34.37 2.78
2248 2922 9.027129 CATATCCGAGTTTTTATACGAGAAACA 57.973 33.333 0.00 0.00 36.11 2.83
2249 2923 6.939551 TCCGAGTTTTTATACGAGAAACAG 57.060 37.500 0.00 0.00 36.11 3.16
2250 2924 6.680810 TCCGAGTTTTTATACGAGAAACAGA 58.319 36.000 0.00 0.00 36.11 3.41
2251 2925 6.805271 TCCGAGTTTTTATACGAGAAACAGAG 59.195 38.462 0.00 0.00 36.11 3.35
2252 2926 6.805271 CCGAGTTTTTATACGAGAAACAGAGA 59.195 38.462 0.00 0.00 36.11 3.10
2253 2927 7.008447 CCGAGTTTTTATACGAGAAACAGAGAG 59.992 40.741 0.00 0.00 36.11 3.20
2254 2928 7.461677 CGAGTTTTTATACGAGAAACAGAGAGC 60.462 40.741 0.00 0.00 36.11 4.09
2255 2929 7.152645 AGTTTTTATACGAGAAACAGAGAGCA 58.847 34.615 0.00 0.00 36.11 4.26
2256 2930 6.946229 TTTTATACGAGAAACAGAGAGCAC 57.054 37.500 0.00 0.00 0.00 4.40
2257 2931 5.638596 TTATACGAGAAACAGAGAGCACA 57.361 39.130 0.00 0.00 0.00 4.57
2258 2932 2.430546 ACGAGAAACAGAGAGCACAG 57.569 50.000 0.00 0.00 0.00 3.66
2259 2933 1.957177 ACGAGAAACAGAGAGCACAGA 59.043 47.619 0.00 0.00 0.00 3.41
2260 2934 2.560542 ACGAGAAACAGAGAGCACAGAT 59.439 45.455 0.00 0.00 0.00 2.90
2261 2935 3.178267 CGAGAAACAGAGAGCACAGATC 58.822 50.000 0.00 0.00 0.00 2.75
2262 2936 3.366781 CGAGAAACAGAGAGCACAGATCA 60.367 47.826 0.00 0.00 0.00 2.92
2263 2937 4.677514 CGAGAAACAGAGAGCACAGATCAT 60.678 45.833 0.00 0.00 0.00 2.45
2264 2938 5.449725 CGAGAAACAGAGAGCACAGATCATA 60.450 44.000 0.00 0.00 0.00 2.15
2265 2939 5.904941 AGAAACAGAGAGCACAGATCATAG 58.095 41.667 0.00 0.00 0.00 2.23
2266 2940 3.731652 ACAGAGAGCACAGATCATAGC 57.268 47.619 0.00 0.00 0.00 2.97
2267 2941 3.298619 ACAGAGAGCACAGATCATAGCT 58.701 45.455 5.62 5.62 40.60 3.32
2270 2944 2.453983 GAGCACAGATCATAGCTCCC 57.546 55.000 17.47 0.88 45.79 4.30
2271 2945 1.969923 GAGCACAGATCATAGCTCCCT 59.030 52.381 17.47 0.00 45.79 4.20
2272 2946 1.969923 AGCACAGATCATAGCTCCCTC 59.030 52.381 0.00 0.00 30.05 4.30
2273 2947 1.969923 GCACAGATCATAGCTCCCTCT 59.030 52.381 0.00 0.00 0.00 3.69
2274 2948 2.288948 GCACAGATCATAGCTCCCTCTG 60.289 54.545 11.74 11.74 39.35 3.35
2275 2949 2.964464 CACAGATCATAGCTCCCTCTGT 59.036 50.000 12.73 12.73 45.47 3.41
2276 2950 3.387374 CACAGATCATAGCTCCCTCTGTT 59.613 47.826 14.83 3.23 42.85 3.16
2277 2951 4.036518 ACAGATCATAGCTCCCTCTGTTT 58.963 43.478 12.73 0.00 42.85 2.83
2278 2952 4.100808 ACAGATCATAGCTCCCTCTGTTTC 59.899 45.833 12.73 0.00 42.85 2.78
2279 2953 4.344679 CAGATCATAGCTCCCTCTGTTTCT 59.655 45.833 0.00 0.00 30.98 2.52
2280 2954 5.538053 CAGATCATAGCTCCCTCTGTTTCTA 59.462 44.000 0.00 0.00 30.98 2.10
2281 2955 6.211184 CAGATCATAGCTCCCTCTGTTTCTAT 59.789 42.308 0.00 0.00 30.98 1.98
2282 2956 7.395772 CAGATCATAGCTCCCTCTGTTTCTATA 59.604 40.741 0.00 0.00 30.98 1.31
2283 2957 6.902771 TCATAGCTCCCTCTGTTTCTATAC 57.097 41.667 0.00 0.00 0.00 1.47
2284 2958 6.615617 TCATAGCTCCCTCTGTTTCTATACT 58.384 40.000 0.00 0.00 0.00 2.12
2285 2959 6.717540 TCATAGCTCCCTCTGTTTCTATACTC 59.282 42.308 0.00 0.00 0.00 2.59
2286 2960 5.137412 AGCTCCCTCTGTTTCTATACTCT 57.863 43.478 0.00 0.00 0.00 3.24
2287 2961 5.137551 AGCTCCCTCTGTTTCTATACTCTC 58.862 45.833 0.00 0.00 0.00 3.20
2288 2962 5.103686 AGCTCCCTCTGTTTCTATACTCTCT 60.104 44.000 0.00 0.00 0.00 3.10
2289 2963 5.009610 GCTCCCTCTGTTTCTATACTCTCTG 59.990 48.000 0.00 0.00 0.00 3.35
2290 2964 6.080969 TCCCTCTGTTTCTATACTCTCTGT 57.919 41.667 0.00 0.00 0.00 3.41
2291 2965 6.123651 TCCCTCTGTTTCTATACTCTCTGTC 58.876 44.000 0.00 0.00 0.00 3.51
2292 2966 6.069323 TCCCTCTGTTTCTATACTCTCTGTCT 60.069 42.308 0.00 0.00 0.00 3.41
2293 2967 6.605594 CCCTCTGTTTCTATACTCTCTGTCTT 59.394 42.308 0.00 0.00 0.00 3.01
2294 2968 7.123547 CCCTCTGTTTCTATACTCTCTGTCTTT 59.876 40.741 0.00 0.00 0.00 2.52
2295 2969 8.527810 CCTCTGTTTCTATACTCTCTGTCTTTT 58.472 37.037 0.00 0.00 0.00 2.27
2308 2982 9.892130 ACTCTCTGTCTTTTAGAAGAAGAAAAA 57.108 29.630 0.00 0.00 43.21 1.94
2310 2984 8.818057 TCTCTGTCTTTTAGAAGAAGAAAAACG 58.182 33.333 0.00 0.00 43.21 3.60
2311 2985 7.407337 TCTGTCTTTTAGAAGAAGAAAAACGC 58.593 34.615 0.00 0.00 43.21 4.84
2312 2986 7.065324 TCTGTCTTTTAGAAGAAGAAAAACGCA 59.935 33.333 0.00 0.00 43.21 5.24
2313 2987 7.531716 TGTCTTTTAGAAGAAGAAAAACGCAA 58.468 30.769 0.00 0.00 43.21 4.85
2314 2988 7.696453 TGTCTTTTAGAAGAAGAAAAACGCAAG 59.304 33.333 0.00 0.00 43.21 4.01
2315 2989 6.691388 TCTTTTAGAAGAAGAAAAACGCAAGC 59.309 34.615 0.00 0.00 38.91 4.01
2316 2990 5.751243 TTAGAAGAAGAAAAACGCAAGCT 57.249 34.783 0.00 0.00 45.62 3.74
2317 2991 4.216366 AGAAGAAGAAAAACGCAAGCTC 57.784 40.909 0.00 0.00 45.62 4.09
2318 2992 3.879892 AGAAGAAGAAAAACGCAAGCTCT 59.120 39.130 0.00 0.00 45.62 4.09
2319 2993 3.887339 AGAAGAAAAACGCAAGCTCTC 57.113 42.857 0.00 0.00 45.62 3.20
2320 2994 3.206150 AGAAGAAAAACGCAAGCTCTCA 58.794 40.909 0.00 0.00 45.62 3.27
2321 2995 3.627577 AGAAGAAAAACGCAAGCTCTCAA 59.372 39.130 0.00 0.00 45.62 3.02
2322 2996 4.096382 AGAAGAAAAACGCAAGCTCTCAAA 59.904 37.500 0.00 0.00 45.62 2.69
2323 2997 4.370364 AGAAAAACGCAAGCTCTCAAAA 57.630 36.364 0.00 0.00 45.62 2.44
2324 2998 4.105486 AGAAAAACGCAAGCTCTCAAAAC 58.895 39.130 0.00 0.00 45.62 2.43
2325 2999 3.782889 AAAACGCAAGCTCTCAAAACT 57.217 38.095 0.00 0.00 45.62 2.66
2326 3000 3.340337 AAACGCAAGCTCTCAAAACTC 57.660 42.857 0.00 0.00 45.62 3.01
2327 3001 1.953559 ACGCAAGCTCTCAAAACTCA 58.046 45.000 0.00 0.00 45.62 3.41
2328 3002 2.288666 ACGCAAGCTCTCAAAACTCAA 58.711 42.857 0.00 0.00 45.62 3.02
2329 3003 2.682856 ACGCAAGCTCTCAAAACTCAAA 59.317 40.909 0.00 0.00 45.62 2.69
2330 3004 3.038710 CGCAAGCTCTCAAAACTCAAAC 58.961 45.455 0.00 0.00 0.00 2.93
2331 3005 3.487376 CGCAAGCTCTCAAAACTCAAACA 60.487 43.478 0.00 0.00 0.00 2.83
2332 3006 4.423732 GCAAGCTCTCAAAACTCAAACAA 58.576 39.130 0.00 0.00 0.00 2.83
2333 3007 4.864247 GCAAGCTCTCAAAACTCAAACAAA 59.136 37.500 0.00 0.00 0.00 2.83
2334 3008 5.521372 GCAAGCTCTCAAAACTCAAACAAAT 59.479 36.000 0.00 0.00 0.00 2.32
2335 3009 6.697019 GCAAGCTCTCAAAACTCAAACAAATA 59.303 34.615 0.00 0.00 0.00 1.40
2336 3010 7.222611 GCAAGCTCTCAAAACTCAAACAAATAA 59.777 33.333 0.00 0.00 0.00 1.40
2337 3011 8.749499 CAAGCTCTCAAAACTCAAACAAATAAG 58.251 33.333 0.00 0.00 0.00 1.73
2338 3012 7.428826 AGCTCTCAAAACTCAAACAAATAAGG 58.571 34.615 0.00 0.00 0.00 2.69
2339 3013 6.642540 GCTCTCAAAACTCAAACAAATAAGGG 59.357 38.462 0.00 0.00 0.00 3.95
2340 3014 6.512297 TCTCAAAACTCAAACAAATAAGGGC 58.488 36.000 0.00 0.00 0.00 5.19
2341 3015 6.097554 TCTCAAAACTCAAACAAATAAGGGCA 59.902 34.615 0.00 0.00 0.00 5.36
2342 3016 6.825610 TCAAAACTCAAACAAATAAGGGCAT 58.174 32.000 0.00 0.00 0.00 4.40
2343 3017 6.928492 TCAAAACTCAAACAAATAAGGGCATC 59.072 34.615 0.00 0.00 0.00 3.91
2344 3018 6.670695 AAACTCAAACAAATAAGGGCATCT 57.329 33.333 0.00 0.00 0.00 2.90
2345 3019 5.904362 ACTCAAACAAATAAGGGCATCTC 57.096 39.130 0.00 0.00 0.00 2.75
2346 3020 5.574188 ACTCAAACAAATAAGGGCATCTCT 58.426 37.500 0.00 0.00 0.00 3.10
2347 3021 6.721318 ACTCAAACAAATAAGGGCATCTCTA 58.279 36.000 0.00 0.00 0.00 2.43
2348 3022 7.175104 ACTCAAACAAATAAGGGCATCTCTAA 58.825 34.615 0.00 0.00 0.00 2.10
2349 3023 7.337942 ACTCAAACAAATAAGGGCATCTCTAAG 59.662 37.037 0.00 0.00 0.00 2.18
2350 3024 7.402054 TCAAACAAATAAGGGCATCTCTAAGA 58.598 34.615 0.00 0.00 0.00 2.10
2351 3025 7.336931 TCAAACAAATAAGGGCATCTCTAAGAC 59.663 37.037 0.00 0.00 0.00 3.01
2352 3026 5.360591 ACAAATAAGGGCATCTCTAAGACG 58.639 41.667 0.00 0.00 0.00 4.18
2353 3027 4.608948 AATAAGGGCATCTCTAAGACGG 57.391 45.455 0.00 0.00 0.00 4.79
2354 3028 2.160721 AAGGGCATCTCTAAGACGGA 57.839 50.000 0.00 0.00 0.00 4.69
2355 3029 1.404843 AGGGCATCTCTAAGACGGAC 58.595 55.000 0.00 0.00 0.00 4.79
2356 3030 1.112113 GGGCATCTCTAAGACGGACA 58.888 55.000 0.00 0.00 0.00 4.02
2357 3031 1.202428 GGGCATCTCTAAGACGGACAC 60.202 57.143 0.00 0.00 0.00 3.67
2359 3033 1.828832 CATCTCTAAGACGGACACGC 58.171 55.000 0.00 0.00 46.04 5.34
2360 3034 0.377554 ATCTCTAAGACGGACACGCG 59.622 55.000 3.53 3.53 46.04 6.01
2361 3035 0.671472 TCTCTAAGACGGACACGCGA 60.671 55.000 15.93 0.00 46.04 5.87
2362 3036 0.167470 CTCTAAGACGGACACGCGAA 59.833 55.000 15.93 0.00 46.04 4.70
2363 3037 0.110056 TCTAAGACGGACACGCGAAC 60.110 55.000 15.93 2.91 46.04 3.95
2364 3038 1.069378 CTAAGACGGACACGCGAACC 61.069 60.000 15.93 12.02 46.04 3.62
2383 3057 3.770040 CCCGCATCCGTCCAGACA 61.770 66.667 0.00 0.00 0.00 3.41
2384 3058 2.202797 CCGCATCCGTCCAGACAG 60.203 66.667 0.00 0.00 0.00 3.51
2385 3059 2.887568 CGCATCCGTCCAGACAGC 60.888 66.667 0.00 0.00 0.00 4.40
2386 3060 2.887568 GCATCCGTCCAGACAGCG 60.888 66.667 0.00 0.00 0.00 5.18
2387 3061 2.202797 CATCCGTCCAGACAGCGG 60.203 66.667 0.00 0.00 46.12 5.52
2391 3065 3.550656 CGTCCAGACAGCGGAAAC 58.449 61.111 0.00 0.00 33.29 2.78
2392 3066 2.027625 CGTCCAGACAGCGGAAACC 61.028 63.158 0.00 0.00 33.29 3.27
2393 3067 1.070786 GTCCAGACAGCGGAAACCA 59.929 57.895 0.00 0.00 33.29 3.67
2394 3068 0.321653 GTCCAGACAGCGGAAACCAT 60.322 55.000 0.00 0.00 33.29 3.55
2395 3069 0.400213 TCCAGACAGCGGAAACCATT 59.600 50.000 0.00 0.00 0.00 3.16
2396 3070 0.804989 CCAGACAGCGGAAACCATTC 59.195 55.000 0.00 0.00 34.66 2.67
2397 3071 1.522668 CAGACAGCGGAAACCATTCA 58.477 50.000 0.00 0.00 37.29 2.57
2398 3072 1.879380 CAGACAGCGGAAACCATTCAA 59.121 47.619 0.00 0.00 37.29 2.69
2399 3073 1.880027 AGACAGCGGAAACCATTCAAC 59.120 47.619 0.00 0.00 37.29 3.18
2400 3074 0.591170 ACAGCGGAAACCATTCAACG 59.409 50.000 0.00 0.00 37.29 4.10
2401 3075 0.591170 CAGCGGAAACCATTCAACGT 59.409 50.000 0.00 0.00 37.29 3.99
2402 3076 0.591170 AGCGGAAACCATTCAACGTG 59.409 50.000 0.00 0.00 37.29 4.49
2403 3077 0.386731 GCGGAAACCATTCAACGTGG 60.387 55.000 0.00 0.00 42.55 4.94
2404 3078 0.239879 CGGAAACCATTCAACGTGGG 59.760 55.000 0.00 0.00 41.14 4.61
2405 3079 1.611519 GGAAACCATTCAACGTGGGA 58.388 50.000 0.00 0.00 41.14 4.37
2406 3080 1.268625 GGAAACCATTCAACGTGGGAC 59.731 52.381 0.00 0.00 41.14 4.46
2407 3081 2.227194 GAAACCATTCAACGTGGGACT 58.773 47.619 0.00 0.00 41.14 3.85
2408 3082 1.604604 AACCATTCAACGTGGGACTG 58.395 50.000 0.00 0.00 41.14 3.51
2409 3083 0.472471 ACCATTCAACGTGGGACTGT 59.528 50.000 0.00 0.00 41.14 3.55
2410 3084 1.695242 ACCATTCAACGTGGGACTGTA 59.305 47.619 0.00 0.00 41.14 2.74
2411 3085 2.304761 ACCATTCAACGTGGGACTGTAT 59.695 45.455 0.00 0.00 41.14 2.29
2412 3086 2.936498 CCATTCAACGTGGGACTGTATC 59.064 50.000 0.00 0.00 32.98 2.24
2413 3087 2.357327 TTCAACGTGGGACTGTATCG 57.643 50.000 0.00 0.00 0.00 2.92
2414 3088 1.536940 TCAACGTGGGACTGTATCGA 58.463 50.000 0.00 0.00 0.00 3.59
2415 3089 2.097036 TCAACGTGGGACTGTATCGAT 58.903 47.619 2.16 2.16 0.00 3.59
2416 3090 3.281158 TCAACGTGGGACTGTATCGATA 58.719 45.455 0.00 0.00 0.00 2.92
2417 3091 3.065786 TCAACGTGGGACTGTATCGATAC 59.934 47.826 25.48 25.48 0.00 2.24
2418 3092 2.646930 ACGTGGGACTGTATCGATACA 58.353 47.619 30.84 30.84 40.69 2.29
2419 3093 3.220110 ACGTGGGACTGTATCGATACAT 58.780 45.455 32.46 23.34 41.92 2.29
2420 3094 3.004419 ACGTGGGACTGTATCGATACATG 59.996 47.826 32.46 26.76 41.92 3.21
2421 3095 3.252458 CGTGGGACTGTATCGATACATGA 59.748 47.826 32.46 14.78 41.92 3.07
2422 3096 4.261447 CGTGGGACTGTATCGATACATGAA 60.261 45.833 32.46 17.02 41.92 2.57
2423 3097 5.223382 GTGGGACTGTATCGATACATGAAG 58.777 45.833 32.46 24.03 41.92 3.02
2424 3098 4.893524 TGGGACTGTATCGATACATGAAGT 59.106 41.667 32.46 26.57 41.92 3.01
2425 3099 5.221244 TGGGACTGTATCGATACATGAAGTG 60.221 44.000 32.46 23.12 41.92 3.16
2426 3100 5.223382 GGACTGTATCGATACATGAAGTGG 58.777 45.833 32.46 22.52 41.92 4.00
2427 3101 5.221263 GGACTGTATCGATACATGAAGTGGT 60.221 44.000 32.46 25.05 41.92 4.16
2428 3102 5.833082 ACTGTATCGATACATGAAGTGGTC 58.167 41.667 32.46 6.53 41.92 4.02
2429 3103 5.196341 TGTATCGATACATGAAGTGGTCC 57.804 43.478 29.79 4.29 38.28 4.46
2430 3104 2.863401 TCGATACATGAAGTGGTCCG 57.137 50.000 0.00 0.00 0.00 4.79
2431 3105 1.407618 TCGATACATGAAGTGGTCCGG 59.592 52.381 0.00 0.00 0.00 5.14
2432 3106 1.407618 CGATACATGAAGTGGTCCGGA 59.592 52.381 0.00 0.00 0.00 5.14
2433 3107 2.798499 CGATACATGAAGTGGTCCGGAC 60.798 54.545 27.04 27.04 0.00 4.79
2434 3108 0.528924 TACATGAAGTGGTCCGGACG 59.471 55.000 27.68 13.85 0.00 4.79
2435 3109 1.292223 CATGAAGTGGTCCGGACGT 59.708 57.895 27.68 12.54 0.00 4.34
2436 3110 0.736325 CATGAAGTGGTCCGGACGTC 60.736 60.000 27.68 21.45 0.00 4.34
2437 3111 1.183030 ATGAAGTGGTCCGGACGTCA 61.183 55.000 27.68 24.88 36.47 4.35
2438 3112 1.183030 TGAAGTGGTCCGGACGTCAT 61.183 55.000 27.68 15.69 28.53 3.06
2439 3113 0.037605 GAAGTGGTCCGGACGTCATT 60.038 55.000 27.68 18.68 0.00 2.57
2440 3114 0.395312 AAGTGGTCCGGACGTCATTT 59.605 50.000 27.68 19.64 0.00 2.32
2441 3115 0.037605 AGTGGTCCGGACGTCATTTC 60.038 55.000 27.68 12.78 0.00 2.17
2442 3116 0.037605 GTGGTCCGGACGTCATTTCT 60.038 55.000 27.68 0.00 0.00 2.52
2443 3117 0.682852 TGGTCCGGACGTCATTTCTT 59.317 50.000 27.68 0.00 0.00 2.52
2444 3118 1.071071 TGGTCCGGACGTCATTTCTTT 59.929 47.619 27.68 0.00 0.00 2.52
2445 3119 1.730612 GGTCCGGACGTCATTTCTTTC 59.269 52.381 27.68 5.92 0.00 2.62
2446 3120 1.389106 GTCCGGACGTCATTTCTTTCG 59.611 52.381 20.85 8.69 0.00 3.46
2447 3121 1.000060 TCCGGACGTCATTTCTTTCGT 60.000 47.619 18.91 0.00 39.21 3.85
2448 3122 2.228582 TCCGGACGTCATTTCTTTCGTA 59.771 45.455 18.91 0.00 36.67 3.43
2449 3123 2.988493 CCGGACGTCATTTCTTTCGTAA 59.012 45.455 18.91 0.00 36.67 3.18
2450 3124 3.429543 CCGGACGTCATTTCTTTCGTAAA 59.570 43.478 18.91 0.00 36.67 2.01
2451 3125 4.380290 CGGACGTCATTTCTTTCGTAAAC 58.620 43.478 18.91 0.00 36.67 2.01
2452 3126 4.664891 CGGACGTCATTTCTTTCGTAAACC 60.665 45.833 18.91 0.00 36.67 3.27
2453 3127 4.379374 ACGTCATTTCTTTCGTAAACCG 57.621 40.909 0.00 0.00 34.78 4.44
2454 3128 3.184986 ACGTCATTTCTTTCGTAAACCGG 59.815 43.478 0.00 0.00 37.11 5.28
2455 3129 3.429543 CGTCATTTCTTTCGTAAACCGGA 59.570 43.478 9.46 0.00 37.11 5.14
2456 3130 4.433805 CGTCATTTCTTTCGTAAACCGGAG 60.434 45.833 9.46 0.00 37.11 4.63
2457 3131 4.687483 GTCATTTCTTTCGTAAACCGGAGA 59.313 41.667 9.46 0.00 37.11 3.71
2458 3132 4.687483 TCATTTCTTTCGTAAACCGGAGAC 59.313 41.667 9.46 1.13 37.11 3.36
2459 3133 3.731652 TTCTTTCGTAAACCGGAGACA 57.268 42.857 9.46 0.00 37.11 3.41
2460 3134 3.731652 TCTTTCGTAAACCGGAGACAA 57.268 42.857 9.46 0.00 37.11 3.18
2461 3135 4.057406 TCTTTCGTAAACCGGAGACAAA 57.943 40.909 9.46 5.71 37.11 2.83
2462 3136 4.440880 TCTTTCGTAAACCGGAGACAAAA 58.559 39.130 9.46 0.00 37.11 2.44
2463 3137 4.508861 TCTTTCGTAAACCGGAGACAAAAG 59.491 41.667 9.46 10.11 37.11 2.27
2464 3138 3.457610 TCGTAAACCGGAGACAAAAGT 57.542 42.857 9.46 0.00 37.11 2.66
2465 3139 3.125316 TCGTAAACCGGAGACAAAAGTG 58.875 45.455 9.46 0.00 37.11 3.16
2466 3140 3.125316 CGTAAACCGGAGACAAAAGTGA 58.875 45.455 9.46 0.00 0.00 3.41
2467 3141 3.183775 CGTAAACCGGAGACAAAAGTGAG 59.816 47.826 9.46 0.00 0.00 3.51
2468 3142 2.256117 AACCGGAGACAAAAGTGAGG 57.744 50.000 9.46 0.00 0.00 3.86
2469 3143 0.396811 ACCGGAGACAAAAGTGAGGG 59.603 55.000 9.46 0.00 0.00 4.30
2470 3144 0.685097 CCGGAGACAAAAGTGAGGGA 59.315 55.000 0.00 0.00 0.00 4.20
2471 3145 1.338200 CCGGAGACAAAAGTGAGGGAG 60.338 57.143 0.00 0.00 0.00 4.30
2472 3146 1.344763 CGGAGACAAAAGTGAGGGAGT 59.655 52.381 0.00 0.00 0.00 3.85
2473 3147 2.224305 CGGAGACAAAAGTGAGGGAGTT 60.224 50.000 0.00 0.00 0.00 3.01
2474 3148 3.744530 CGGAGACAAAAGTGAGGGAGTTT 60.745 47.826 0.00 0.00 0.00 2.66
2475 3149 4.207955 GGAGACAAAAGTGAGGGAGTTTT 58.792 43.478 0.00 0.00 37.64 2.43
2476 3150 5.374071 GGAGACAAAAGTGAGGGAGTTTTA 58.626 41.667 0.00 0.00 35.38 1.52
2477 3151 5.470437 GGAGACAAAAGTGAGGGAGTTTTAG 59.530 44.000 0.00 0.00 35.38 1.85
2478 3152 5.377478 AGACAAAAGTGAGGGAGTTTTAGG 58.623 41.667 0.00 0.00 35.38 2.69
2479 3153 4.470602 ACAAAAGTGAGGGAGTTTTAGGG 58.529 43.478 0.00 0.00 35.38 3.53
2480 3154 4.079385 ACAAAAGTGAGGGAGTTTTAGGGT 60.079 41.667 0.00 0.00 35.38 4.34
2481 3155 5.133153 ACAAAAGTGAGGGAGTTTTAGGGTA 59.867 40.000 0.00 0.00 35.38 3.69
2482 3156 5.500546 AAAGTGAGGGAGTTTTAGGGTAG 57.499 43.478 0.00 0.00 0.00 3.18
2483 3157 4.143406 AGTGAGGGAGTTTTAGGGTAGT 57.857 45.455 0.00 0.00 0.00 2.73
2484 3158 4.500452 AGTGAGGGAGTTTTAGGGTAGTT 58.500 43.478 0.00 0.00 0.00 2.24
2485 3159 4.531339 AGTGAGGGAGTTTTAGGGTAGTTC 59.469 45.833 0.00 0.00 0.00 3.01
2486 3160 4.285260 GTGAGGGAGTTTTAGGGTAGTTCA 59.715 45.833 0.00 0.00 0.00 3.18
2487 3161 4.285260 TGAGGGAGTTTTAGGGTAGTTCAC 59.715 45.833 0.00 0.00 0.00 3.18
2497 3171 3.929660 GTAGTTCACCACCAGGGAC 57.070 57.895 0.00 0.00 41.15 4.46
2498 3172 0.037605 GTAGTTCACCACCAGGGACG 60.038 60.000 0.00 0.00 41.15 4.79
2499 3173 0.178955 TAGTTCACCACCAGGGACGA 60.179 55.000 0.00 0.00 41.15 4.20
2500 3174 1.052124 AGTTCACCACCAGGGACGAA 61.052 55.000 0.00 0.00 41.15 3.85
2501 3175 0.602905 GTTCACCACCAGGGACGAAG 60.603 60.000 0.00 0.00 41.15 3.79
2502 3176 2.358737 CACCACCAGGGACGAAGC 60.359 66.667 0.00 0.00 41.15 3.86
2503 3177 2.526873 ACCACCAGGGACGAAGCT 60.527 61.111 0.00 0.00 41.15 3.74
2504 3178 1.229082 ACCACCAGGGACGAAGCTA 60.229 57.895 0.00 0.00 41.15 3.32
2505 3179 1.258445 ACCACCAGGGACGAAGCTAG 61.258 60.000 0.00 0.00 41.15 3.42
2506 3180 0.970937 CCACCAGGGACGAAGCTAGA 60.971 60.000 0.00 0.00 40.01 2.43
2507 3181 0.895530 CACCAGGGACGAAGCTAGAA 59.104 55.000 0.00 0.00 0.00 2.10
2508 3182 1.275291 CACCAGGGACGAAGCTAGAAA 59.725 52.381 0.00 0.00 0.00 2.52
2509 3183 1.975680 ACCAGGGACGAAGCTAGAAAA 59.024 47.619 0.00 0.00 0.00 2.29
2510 3184 2.370849 ACCAGGGACGAAGCTAGAAAAA 59.629 45.455 0.00 0.00 0.00 1.94
2528 3202 4.584327 AAAAATAGGCACTGGTGTCAAC 57.416 40.909 8.06 0.00 41.52 3.18
2537 3211 2.517402 GGTGTCAACCGTTGCCCA 60.517 61.111 6.37 3.20 36.51 5.36
2538 3212 2.719354 GTGTCAACCGTTGCCCAC 59.281 61.111 6.37 11.23 0.00 4.61
2539 3213 2.115911 GTGTCAACCGTTGCCCACA 61.116 57.895 20.25 12.24 34.48 4.17
2540 3214 1.378646 TGTCAACCGTTGCCCACAA 60.379 52.632 6.37 0.00 0.00 3.33
2541 3215 0.753479 TGTCAACCGTTGCCCACAAT 60.753 50.000 6.37 0.00 38.27 2.71
2542 3216 0.387565 GTCAACCGTTGCCCACAATT 59.612 50.000 6.37 0.00 38.27 2.32
2543 3217 0.387202 TCAACCGTTGCCCACAATTG 59.613 50.000 3.24 3.24 38.27 2.32
2544 3218 1.068921 AACCGTTGCCCACAATTGC 59.931 52.632 5.05 0.00 38.27 3.56
2545 3219 1.680522 AACCGTTGCCCACAATTGCA 61.681 50.000 5.05 0.00 38.27 4.08
2546 3220 1.068753 CCGTTGCCCACAATTGCAA 59.931 52.632 5.05 0.00 44.64 4.08
2551 3225 3.488778 TTGCCCACAATTGCAAAGATT 57.511 38.095 1.71 0.00 43.94 2.40
2552 3226 4.613925 TTGCCCACAATTGCAAAGATTA 57.386 36.364 1.71 0.00 43.94 1.75
2553 3227 4.822685 TGCCCACAATTGCAAAGATTAT 57.177 36.364 1.71 0.00 33.87 1.28
2554 3228 5.929058 TGCCCACAATTGCAAAGATTATA 57.071 34.783 1.71 0.00 33.87 0.98
2555 3229 6.291648 TGCCCACAATTGCAAAGATTATAA 57.708 33.333 1.71 0.00 33.87 0.98
2556 3230 6.705302 TGCCCACAATTGCAAAGATTATAAA 58.295 32.000 1.71 0.00 33.87 1.40
2557 3231 7.337167 TGCCCACAATTGCAAAGATTATAAAT 58.663 30.769 1.71 0.00 33.87 1.40
2558 3232 8.481314 TGCCCACAATTGCAAAGATTATAAATA 58.519 29.630 1.71 0.00 33.87 1.40
2559 3233 9.323985 GCCCACAATTGCAAAGATTATAAATAA 57.676 29.630 1.71 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.878406 CGGGCACGGAAGATATTCAAAT 59.122 45.455 0.00 0.00 36.18 2.32
1 2 2.285083 CGGGCACGGAAGATATTCAAA 58.715 47.619 0.00 0.00 36.18 2.69
2 3 1.948104 CGGGCACGGAAGATATTCAA 58.052 50.000 0.00 0.00 36.18 2.69
3 4 0.531974 GCGGGCACGGAAGATATTCA 60.532 55.000 11.92 0.00 41.36 2.57
4 5 1.228657 GGCGGGCACGGAAGATATTC 61.229 60.000 11.92 0.00 41.36 1.75
5 6 1.227853 GGCGGGCACGGAAGATATT 60.228 57.895 11.92 0.00 41.36 1.28
6 7 2.426023 GGCGGGCACGGAAGATAT 59.574 61.111 11.92 0.00 41.36 1.63
7 8 3.078196 TGGCGGGCACGGAAGATA 61.078 61.111 11.92 0.00 41.36 1.98
8 9 4.778143 GTGGCGGGCACGGAAGAT 62.778 66.667 19.23 0.00 41.36 2.40
14 15 3.583276 TTCTACTGTGGCGGGCACG 62.583 63.158 26.58 22.46 44.63 5.34
15 16 2.033194 GTTCTACTGTGGCGGGCAC 61.033 63.158 25.93 25.93 0.00 5.01
16 17 2.345991 GTTCTACTGTGGCGGGCA 59.654 61.111 0.00 0.00 0.00 5.36
17 18 1.741770 CTGTTCTACTGTGGCGGGC 60.742 63.158 0.00 0.00 0.00 6.13
18 19 1.079127 CCTGTTCTACTGTGGCGGG 60.079 63.158 0.00 0.00 0.00 6.13
19 20 1.741770 GCCTGTTCTACTGTGGCGG 60.742 63.158 0.00 0.00 33.96 6.13
20 21 3.876300 GCCTGTTCTACTGTGGCG 58.124 61.111 0.00 0.00 33.96 5.69
21 22 0.610687 AGAGCCTGTTCTACTGTGGC 59.389 55.000 0.00 0.00 43.52 5.01
22 23 2.159170 GCTAGAGCCTGTTCTACTGTGG 60.159 54.545 0.00 0.00 34.31 4.17
23 24 3.157932 GCTAGAGCCTGTTCTACTGTG 57.842 52.381 0.00 0.00 34.31 3.66
36 37 3.873910 TCATTTACTTGTGGGCTAGAGC 58.126 45.455 0.00 0.00 41.14 4.09
37 38 5.674525 TCATCATTTACTTGTGGGCTAGAG 58.325 41.667 0.00 0.00 0.00 2.43
38 39 5.692115 TCATCATTTACTTGTGGGCTAGA 57.308 39.130 0.00 0.00 0.00 2.43
39 40 5.066505 GGTTCATCATTTACTTGTGGGCTAG 59.933 44.000 0.00 0.00 0.00 3.42
40 41 4.947388 GGTTCATCATTTACTTGTGGGCTA 59.053 41.667 0.00 0.00 0.00 3.93
41 42 3.763897 GGTTCATCATTTACTTGTGGGCT 59.236 43.478 0.00 0.00 0.00 5.19
42 43 3.427503 CGGTTCATCATTTACTTGTGGGC 60.428 47.826 0.00 0.00 0.00 5.36
43 44 4.006989 TCGGTTCATCATTTACTTGTGGG 58.993 43.478 0.00 0.00 0.00 4.61
44 45 4.435518 CGTCGGTTCATCATTTACTTGTGG 60.436 45.833 0.00 0.00 0.00 4.17
45 46 4.637968 CGTCGGTTCATCATTTACTTGTG 58.362 43.478 0.00 0.00 0.00 3.33
46 47 3.124636 GCGTCGGTTCATCATTTACTTGT 59.875 43.478 0.00 0.00 0.00 3.16
47 48 3.124466 TGCGTCGGTTCATCATTTACTTG 59.876 43.478 0.00 0.00 0.00 3.16
48 49 3.331150 TGCGTCGGTTCATCATTTACTT 58.669 40.909 0.00 0.00 0.00 2.24
49 50 2.930040 CTGCGTCGGTTCATCATTTACT 59.070 45.455 0.00 0.00 0.00 2.24
50 51 2.671396 ACTGCGTCGGTTCATCATTTAC 59.329 45.455 0.00 0.00 0.00 2.01
51 52 2.967362 ACTGCGTCGGTTCATCATTTA 58.033 42.857 0.00 0.00 0.00 1.40
52 53 1.808411 ACTGCGTCGGTTCATCATTT 58.192 45.000 0.00 0.00 0.00 2.32
53 54 2.165641 TCTACTGCGTCGGTTCATCATT 59.834 45.455 0.00 0.00 0.00 2.57
54 55 1.749063 TCTACTGCGTCGGTTCATCAT 59.251 47.619 0.00 0.00 0.00 2.45
55 56 1.132453 CTCTACTGCGTCGGTTCATCA 59.868 52.381 0.00 0.00 0.00 3.07
56 57 1.132643 ACTCTACTGCGTCGGTTCATC 59.867 52.381 0.00 0.00 0.00 2.92
57 58 1.174783 ACTCTACTGCGTCGGTTCAT 58.825 50.000 0.00 0.00 0.00 2.57
58 59 1.466167 GTACTCTACTGCGTCGGTTCA 59.534 52.381 0.00 0.00 0.00 3.18
59 60 1.736681 AGTACTCTACTGCGTCGGTTC 59.263 52.381 0.00 0.00 37.69 3.62
60 61 1.818642 AGTACTCTACTGCGTCGGTT 58.181 50.000 0.00 0.00 37.69 4.44
61 62 3.547567 AGTACTCTACTGCGTCGGT 57.452 52.632 0.00 0.00 37.69 4.69
69 70 0.395448 GGGGCGGTCAGTACTCTACT 60.395 60.000 0.00 0.00 40.28 2.57
70 71 1.390383 GGGGGCGGTCAGTACTCTAC 61.390 65.000 0.00 0.00 0.00 2.59
71 72 1.076485 GGGGGCGGTCAGTACTCTA 60.076 63.158 0.00 0.00 0.00 2.43
72 73 2.363925 GGGGGCGGTCAGTACTCT 60.364 66.667 0.00 0.00 0.00 3.24
73 74 2.288025 TTGGGGGCGGTCAGTACTC 61.288 63.158 0.00 0.00 0.00 2.59
74 75 2.203877 TTGGGGGCGGTCAGTACT 60.204 61.111 0.00 0.00 0.00 2.73
75 76 2.046604 GTTGGGGGCGGTCAGTAC 60.047 66.667 0.00 0.00 0.00 2.73
76 77 1.706995 TTTGTTGGGGGCGGTCAGTA 61.707 55.000 0.00 0.00 0.00 2.74
77 78 2.575455 TTTTGTTGGGGGCGGTCAGT 62.575 55.000 0.00 0.00 0.00 3.41
78 79 1.830408 TTTTGTTGGGGGCGGTCAG 60.830 57.895 0.00 0.00 0.00 3.51
79 80 2.128507 GTTTTGTTGGGGGCGGTCA 61.129 57.895 0.00 0.00 0.00 4.02
80 81 2.732016 GTTTTGTTGGGGGCGGTC 59.268 61.111 0.00 0.00 0.00 4.79
84 85 2.028925 CTGCGTTTTGTTGGGGGC 59.971 61.111 0.00 0.00 0.00 5.80
89 90 1.657181 GGCCGTCTGCGTTTTGTTG 60.657 57.895 0.00 0.00 42.61 3.33
107 108 7.117454 CAGTAGTAAATTACGAATTTCAGCCG 58.883 38.462 8.27 0.00 41.16 5.52
110 111 7.117454 CGGCAGTAGTAAATTACGAATTTCAG 58.883 38.462 8.27 0.00 41.16 3.02
111 112 6.455913 GCGGCAGTAGTAAATTACGAATTTCA 60.456 38.462 8.27 0.00 41.16 2.69
112 113 5.900242 GCGGCAGTAGTAAATTACGAATTTC 59.100 40.000 8.27 0.00 41.16 2.17
113 114 5.352016 TGCGGCAGTAGTAAATTACGAATTT 59.648 36.000 0.00 0.00 43.19 1.82
115 116 4.435425 TGCGGCAGTAGTAAATTACGAAT 58.565 39.130 0.00 0.00 0.00 3.34
116 117 3.847542 TGCGGCAGTAGTAAATTACGAA 58.152 40.909 0.00 0.00 0.00 3.85
117 118 3.507103 TGCGGCAGTAGTAAATTACGA 57.493 42.857 0.00 0.00 0.00 3.43
118 119 4.789095 ATTGCGGCAGTAGTAAATTACG 57.211 40.909 1.67 0.00 0.00 3.18
175 179 5.106712 GCCTGACGAAATTCAAGTGTATTCA 60.107 40.000 0.00 0.00 0.00 2.57
186 220 2.292802 GGCGACGCCTGACGAAATTC 62.293 60.000 31.30 0.00 46.69 2.17
271 310 1.145119 GGGGTAGGGTTGGATTGGATC 59.855 57.143 0.00 0.00 0.00 3.36
330 377 1.589630 GTTCAAATCCAACCGCCCC 59.410 57.895 0.00 0.00 0.00 5.80
337 384 1.953017 CGGTGGCGTTCAAATCCAA 59.047 52.632 0.00 0.00 0.00 3.53
338 385 2.622011 GCGGTGGCGTTCAAATCCA 61.622 57.895 0.00 0.00 0.00 3.41
339 386 1.933115 ATGCGGTGGCGTTCAAATCC 61.933 55.000 0.00 0.00 44.10 3.01
356 413 4.862092 AGACTGCGCGCCGAGATG 62.862 66.667 30.77 13.60 0.00 2.90
388 446 2.234168 ACTCTAGATCGGATCGGATCGA 59.766 50.000 27.79 23.85 45.90 3.59
407 465 2.119655 CCGCCCGCACTAGACTACT 61.120 63.158 0.00 0.00 0.00 2.57
408 466 2.061182 CTCCGCCCGCACTAGACTAC 62.061 65.000 0.00 0.00 0.00 2.73
411 469 4.874977 GCTCCGCCCGCACTAGAC 62.875 72.222 0.00 0.00 0.00 2.59
577 640 2.063378 GGCCTCACTCTCCTCCCAG 61.063 68.421 0.00 0.00 0.00 4.45
804 878 2.262423 AGGCTTGACTTGTTGACTCC 57.738 50.000 0.00 0.00 0.00 3.85
862 936 3.188786 GACGCGTGTGATCTGGCC 61.189 66.667 20.70 0.00 0.00 5.36
865 939 1.807165 CTGGGACGCGTGTGATCTG 60.807 63.158 20.70 1.44 0.00 2.90
879 953 3.672295 GAGGCTTGTCCGAGCTGGG 62.672 68.421 8.78 8.78 42.32 4.45
880 954 2.125350 GAGGCTTGTCCGAGCTGG 60.125 66.667 6.49 0.00 42.32 4.85
884 958 3.302347 AAGGCGAGGCTTGTCCGAG 62.302 63.158 11.18 0.00 40.77 4.63
885 959 3.296709 GAAGGCGAGGCTTGTCCGA 62.297 63.158 16.67 0.00 40.77 4.55
886 960 2.815647 GAAGGCGAGGCTTGTCCG 60.816 66.667 16.67 0.00 40.77 4.79
888 962 1.743252 CCAGAAGGCGAGGCTTGTC 60.743 63.158 16.67 0.00 0.00 3.18
889 963 2.348998 CCAGAAGGCGAGGCTTGT 59.651 61.111 16.67 9.92 0.00 3.16
891 965 1.557269 ATCACCAGAAGGCGAGGCTT 61.557 55.000 11.79 11.79 39.06 4.35
892 966 0.687757 TATCACCAGAAGGCGAGGCT 60.688 55.000 0.00 0.00 39.06 4.58
893 967 0.249657 CTATCACCAGAAGGCGAGGC 60.250 60.000 0.00 0.00 39.06 4.70
899 973 3.406764 GCTATTGGCTATCACCAGAAGG 58.593 50.000 0.00 0.00 41.82 3.46
901 975 2.777114 TGGCTATTGGCTATCACCAGAA 59.223 45.455 1.98 0.00 41.82 3.02
904 978 1.421268 CCTGGCTATTGGCTATCACCA 59.579 52.381 1.98 3.54 41.46 4.17
940 1014 2.989253 TCCTCGTCTGCTTCCGCA 60.989 61.111 0.00 0.00 45.60 5.69
951 1025 0.033991 TCCTTGAGCTAGCTCCTCGT 60.034 55.000 35.76 6.96 42.09 4.18
952 1026 0.667993 CTCCTTGAGCTAGCTCCTCG 59.332 60.000 35.76 24.35 42.09 4.63
954 1028 1.006519 TCACTCCTTGAGCTAGCTCCT 59.993 52.381 35.76 8.59 42.09 3.69
955 1029 1.479709 TCACTCCTTGAGCTAGCTCC 58.520 55.000 35.76 21.16 42.09 4.70
957 1031 1.206849 GCTTCACTCCTTGAGCTAGCT 59.793 52.381 19.45 19.45 34.94 3.32
958 1032 1.650825 GCTTCACTCCTTGAGCTAGC 58.349 55.000 6.62 6.62 34.94 3.42
959 1033 1.552337 TGGCTTCACTCCTTGAGCTAG 59.448 52.381 0.00 0.00 34.94 3.42
960 1034 1.276421 GTGGCTTCACTCCTTGAGCTA 59.724 52.381 0.00 0.00 38.32 3.32
964 1038 0.250467 GCTGTGGCTTCACTCCTTGA 60.250 55.000 0.00 0.00 41.73 3.02
965 1039 1.239968 GGCTGTGGCTTCACTCCTTG 61.240 60.000 0.00 0.00 41.73 3.61
971 1045 3.050275 GACCGGCTGTGGCTTCAC 61.050 66.667 0.00 0.00 41.56 3.18
987 1061 0.471191 TCCTCATAGTAGGACGCCGA 59.529 55.000 0.00 0.00 40.86 5.54
994 1068 1.269831 GCTGCCGTTCCTCATAGTAGG 60.270 57.143 0.00 0.00 38.06 3.18
1419 1502 4.383861 CAGTCGCTCTGGCAGCCA 62.384 66.667 15.23 15.23 46.74 4.75
1694 1780 3.649023 AGTAGTGGTGGTGGTACAATCAA 59.351 43.478 0.00 0.00 44.16 2.57
1695 1781 3.244582 AGTAGTGGTGGTGGTACAATCA 58.755 45.455 0.00 0.00 44.16 2.57
1751 1844 0.395586 TTGGCCCCAAATCTCCATCG 60.396 55.000 0.00 0.00 32.44 3.84
1773 1877 2.912771 TCAACTCTTGAGACCGCAAAA 58.087 42.857 4.49 0.00 34.08 2.44
1774 1878 2.613026 TCAACTCTTGAGACCGCAAA 57.387 45.000 4.49 0.00 34.08 3.68
1777 1881 4.467735 GAAAAATCAACTCTTGAGACCGC 58.532 43.478 4.49 0.00 43.98 5.68
1778 1882 4.757149 AGGAAAAATCAACTCTTGAGACCG 59.243 41.667 4.49 0.00 43.98 4.79
1779 1883 5.106908 CGAGGAAAAATCAACTCTTGAGACC 60.107 44.000 4.49 0.00 43.98 3.85
1780 1884 5.615764 GCGAGGAAAAATCAACTCTTGAGAC 60.616 44.000 4.49 0.00 43.98 3.36
1781 1885 4.452455 GCGAGGAAAAATCAACTCTTGAGA 59.548 41.667 4.49 0.00 43.98 3.27
1782 1886 4.378874 GGCGAGGAAAAATCAACTCTTGAG 60.379 45.833 0.00 0.00 43.98 3.02
1783 1887 3.502211 GGCGAGGAAAAATCAACTCTTGA 59.498 43.478 0.00 0.00 45.01 3.02
1784 1888 3.366374 GGGCGAGGAAAAATCAACTCTTG 60.366 47.826 0.00 0.00 0.00 3.02
1799 1903 2.825836 GCATCCAAGTGGGCGAGG 60.826 66.667 0.00 0.00 36.21 4.63
1802 1906 1.526575 AAGTTGCATCCAAGTGGGCG 61.527 55.000 0.00 0.00 34.89 6.13
1846 1950 1.986575 GCTGCAAATGCTCTCCGGTC 61.987 60.000 0.00 0.00 42.66 4.79
1882 1986 3.063452 TCGTATTCGAAGCATTTCTTGCC 59.937 43.478 3.35 0.00 45.94 4.52
1910 2014 4.717280 TCAAACCCCACCACTAAACAATTT 59.283 37.500 0.00 0.00 0.00 1.82
1920 2024 1.886542 GAACATCTCAAACCCCACCAC 59.113 52.381 0.00 0.00 0.00 4.16
1922 2026 2.586648 AGAACATCTCAAACCCCACC 57.413 50.000 0.00 0.00 0.00 4.61
1928 2036 4.706962 AGGCCCAAATAGAACATCTCAAAC 59.293 41.667 0.00 0.00 0.00 2.93
1943 2051 4.390129 TGAATAAACCACTAGGCCCAAA 57.610 40.909 0.00 0.00 39.06 3.28
1946 2056 4.278310 ACAATGAATAAACCACTAGGCCC 58.722 43.478 0.00 0.00 39.06 5.80
1948 2058 7.602753 AGAAAACAATGAATAAACCACTAGGC 58.397 34.615 0.00 0.00 39.06 3.93
1951 2061 9.255304 GCAAAGAAAACAATGAATAAACCACTA 57.745 29.630 0.00 0.00 0.00 2.74
1959 2069 6.418057 AGTGGGCAAAGAAAACAATGAATA 57.582 33.333 0.00 0.00 0.00 1.75
1965 2075 3.517500 AGGAAAGTGGGCAAAGAAAACAA 59.482 39.130 0.00 0.00 0.00 2.83
1971 2081 0.112412 GGGAGGAAAGTGGGCAAAGA 59.888 55.000 0.00 0.00 0.00 2.52
1978 2088 2.381752 AAAACCAGGGAGGAAAGTGG 57.618 50.000 0.00 0.00 41.22 4.00
2004 2139 3.326588 TCGAATTCAGAAGAAACCCCTCA 59.673 43.478 6.22 0.00 37.29 3.86
2005 2140 3.939066 TCGAATTCAGAAGAAACCCCTC 58.061 45.455 6.22 0.00 37.29 4.30
2020 2155 5.551233 TGAATCTTCAGTCCAGTTCGAATT 58.449 37.500 0.00 0.00 32.50 2.17
2025 2160 6.622462 GCAAAGATGAATCTTCAGTCCAGTTC 60.622 42.308 6.03 0.00 45.83 3.01
2043 2181 4.338879 AGCAGTCTAATGTTGGCAAAGAT 58.661 39.130 0.00 0.00 0.00 2.40
2056 2194 3.125829 CGTTACTGACCGTAGCAGTCTAA 59.874 47.826 0.00 0.00 44.85 2.10
2058 2196 1.467734 CGTTACTGACCGTAGCAGTCT 59.532 52.381 0.00 0.00 44.85 3.24
2059 2197 1.466167 TCGTTACTGACCGTAGCAGTC 59.534 52.381 0.00 0.00 44.85 3.51
2092 2230 2.425668 GGTATTCAAATTGGTGGACCCG 59.574 50.000 0.00 0.00 35.15 5.28
2096 2234 3.443145 ACCGGTATTCAAATTGGTGGA 57.557 42.857 4.49 0.00 0.00 4.02
2110 2248 6.719301 TGGTAATATTTCTTCCAAACCGGTA 58.281 36.000 8.00 0.00 35.57 4.02
2112 2250 6.518208 TTGGTAATATTTCTTCCAAACCGG 57.482 37.500 0.00 0.00 35.61 5.28
2113 2251 8.996024 ATTTTGGTAATATTTCTTCCAAACCG 57.004 30.769 17.86 0.00 44.33 4.44
2129 2803 7.476667 CGTATGCAATCCAGTTATTTTGGTAA 58.523 34.615 0.00 0.00 37.02 2.85
2162 2836 2.359214 AGAGAACTCGCATATGCTTCGA 59.641 45.455 24.56 13.84 39.32 3.71
2164 2838 7.757173 TGAATATAGAGAACTCGCATATGCTTC 59.243 37.037 24.56 20.06 39.32 3.86
2197 2871 0.525761 GCAGCTTGCGTTCCCATTTA 59.474 50.000 0.00 0.00 31.71 1.40
2198 2872 1.290009 GCAGCTTGCGTTCCCATTT 59.710 52.632 0.00 0.00 31.71 2.32
2202 2876 2.753931 CTTTGGCAGCTTGCGTTCCC 62.754 60.000 0.00 0.00 46.21 3.97
2203 2877 1.372128 CTTTGGCAGCTTGCGTTCC 60.372 57.895 0.00 0.00 46.21 3.62
2215 2889 3.782889 AAAACTCGGATATGCTTTGGC 57.217 42.857 0.00 0.00 39.26 4.52
2218 2892 7.924412 TCTCGTATAAAAACTCGGATATGCTTT 59.076 33.333 0.00 0.00 0.00 3.51
2222 2896 9.027129 TGTTTCTCGTATAAAAACTCGGATATG 57.973 33.333 0.00 0.00 34.69 1.78
2223 2897 9.245962 CTGTTTCTCGTATAAAAACTCGGATAT 57.754 33.333 0.00 0.00 34.69 1.63
2224 2898 8.461222 TCTGTTTCTCGTATAAAAACTCGGATA 58.539 33.333 0.00 0.00 34.69 2.59
2225 2899 7.318141 TCTGTTTCTCGTATAAAAACTCGGAT 58.682 34.615 0.00 0.00 34.69 4.18
2226 2900 6.680810 TCTGTTTCTCGTATAAAAACTCGGA 58.319 36.000 0.00 0.00 34.69 4.55
2227 2901 6.805271 TCTCTGTTTCTCGTATAAAAACTCGG 59.195 38.462 0.00 0.00 34.69 4.63
2228 2902 7.461677 GCTCTCTGTTTCTCGTATAAAAACTCG 60.462 40.741 0.00 0.00 34.69 4.18
2229 2903 7.328737 TGCTCTCTGTTTCTCGTATAAAAACTC 59.671 37.037 0.00 0.00 34.69 3.01
2230 2904 7.116519 GTGCTCTCTGTTTCTCGTATAAAAACT 59.883 37.037 0.00 0.00 34.69 2.66
2231 2905 7.095774 TGTGCTCTCTGTTTCTCGTATAAAAAC 60.096 37.037 0.00 0.00 34.30 2.43
2232 2906 6.926826 TGTGCTCTCTGTTTCTCGTATAAAAA 59.073 34.615 0.00 0.00 0.00 1.94
2233 2907 6.452242 TGTGCTCTCTGTTTCTCGTATAAAA 58.548 36.000 0.00 0.00 0.00 1.52
2234 2908 6.020971 TGTGCTCTCTGTTTCTCGTATAAA 57.979 37.500 0.00 0.00 0.00 1.40
2235 2909 5.414765 TCTGTGCTCTCTGTTTCTCGTATAA 59.585 40.000 0.00 0.00 0.00 0.98
2236 2910 4.941873 TCTGTGCTCTCTGTTTCTCGTATA 59.058 41.667 0.00 0.00 0.00 1.47
2237 2911 3.759086 TCTGTGCTCTCTGTTTCTCGTAT 59.241 43.478 0.00 0.00 0.00 3.06
2238 2912 3.146847 TCTGTGCTCTCTGTTTCTCGTA 58.853 45.455 0.00 0.00 0.00 3.43
2239 2913 1.957177 TCTGTGCTCTCTGTTTCTCGT 59.043 47.619 0.00 0.00 0.00 4.18
2240 2914 2.713895 TCTGTGCTCTCTGTTTCTCG 57.286 50.000 0.00 0.00 0.00 4.04
2241 2915 4.185467 TGATCTGTGCTCTCTGTTTCTC 57.815 45.455 0.00 0.00 0.00 2.87
2242 2916 4.822685 ATGATCTGTGCTCTCTGTTTCT 57.177 40.909 0.00 0.00 0.00 2.52
2243 2917 4.507388 GCTATGATCTGTGCTCTCTGTTTC 59.493 45.833 0.00 0.00 0.00 2.78
2244 2918 4.161942 AGCTATGATCTGTGCTCTCTGTTT 59.838 41.667 0.00 0.00 0.00 2.83
2245 2919 3.705579 AGCTATGATCTGTGCTCTCTGTT 59.294 43.478 0.00 0.00 0.00 3.16
2246 2920 3.298619 AGCTATGATCTGTGCTCTCTGT 58.701 45.455 0.00 0.00 0.00 3.41
2247 2921 3.904571 GAGCTATGATCTGTGCTCTCTG 58.095 50.000 19.54 0.00 45.78 3.35
2248 2922 4.318455 GGGAGCTATGATCTGTGCTCTCT 61.318 52.174 23.11 1.73 46.24 3.10
2252 2926 1.969923 GAGGGAGCTATGATCTGTGCT 59.030 52.381 6.62 6.62 38.59 4.40
2253 2927 1.969923 AGAGGGAGCTATGATCTGTGC 59.030 52.381 0.00 0.00 0.00 4.57
2254 2928 2.964464 ACAGAGGGAGCTATGATCTGTG 59.036 50.000 17.69 8.80 46.55 3.66
2255 2929 3.326946 ACAGAGGGAGCTATGATCTGT 57.673 47.619 14.36 14.36 44.29 3.41
2256 2930 4.344679 AGAAACAGAGGGAGCTATGATCTG 59.655 45.833 13.35 13.35 42.43 2.90
2257 2931 4.555689 AGAAACAGAGGGAGCTATGATCT 58.444 43.478 0.00 0.00 0.00 2.75
2258 2932 4.953940 AGAAACAGAGGGAGCTATGATC 57.046 45.455 0.00 0.00 0.00 2.92
2259 2933 7.245292 AGTATAGAAACAGAGGGAGCTATGAT 58.755 38.462 0.00 0.00 0.00 2.45
2260 2934 6.615617 AGTATAGAAACAGAGGGAGCTATGA 58.384 40.000 0.00 0.00 0.00 2.15
2261 2935 6.719370 AGAGTATAGAAACAGAGGGAGCTATG 59.281 42.308 0.00 0.00 0.00 2.23
2262 2936 6.858941 AGAGTATAGAAACAGAGGGAGCTAT 58.141 40.000 0.00 0.00 0.00 2.97
2263 2937 6.102027 AGAGAGTATAGAAACAGAGGGAGCTA 59.898 42.308 0.00 0.00 0.00 3.32
2264 2938 5.103686 AGAGAGTATAGAAACAGAGGGAGCT 60.104 44.000 0.00 0.00 0.00 4.09
2265 2939 5.009610 CAGAGAGTATAGAAACAGAGGGAGC 59.990 48.000 0.00 0.00 0.00 4.70
2266 2940 6.126409 ACAGAGAGTATAGAAACAGAGGGAG 58.874 44.000 0.00 0.00 0.00 4.30
2267 2941 6.069323 AGACAGAGAGTATAGAAACAGAGGGA 60.069 42.308 0.00 0.00 0.00 4.20
2268 2942 6.126409 AGACAGAGAGTATAGAAACAGAGGG 58.874 44.000 0.00 0.00 0.00 4.30
2269 2943 7.639113 AAGACAGAGAGTATAGAAACAGAGG 57.361 40.000 0.00 0.00 0.00 3.69
2282 2956 9.892130 TTTTTCTTCTTCTAAAAGACAGAGAGT 57.108 29.630 0.00 0.00 41.23 3.24
2284 2958 8.818057 CGTTTTTCTTCTTCTAAAAGACAGAGA 58.182 33.333 0.00 0.00 41.23 3.10
2285 2959 7.584485 GCGTTTTTCTTCTTCTAAAAGACAGAG 59.416 37.037 0.00 0.00 41.23 3.35
2286 2960 7.065324 TGCGTTTTTCTTCTTCTAAAAGACAGA 59.935 33.333 0.00 0.00 41.23 3.41
2287 2961 7.186804 TGCGTTTTTCTTCTTCTAAAAGACAG 58.813 34.615 0.00 0.00 41.23 3.51
2288 2962 7.079182 TGCGTTTTTCTTCTTCTAAAAGACA 57.921 32.000 0.00 0.00 41.23 3.41
2289 2963 7.305475 GCTTGCGTTTTTCTTCTTCTAAAAGAC 60.305 37.037 0.00 0.00 41.23 3.01
2290 2964 6.691388 GCTTGCGTTTTTCTTCTTCTAAAAGA 59.309 34.615 0.00 0.00 39.78 2.52
2291 2965 6.693113 AGCTTGCGTTTTTCTTCTTCTAAAAG 59.307 34.615 0.00 0.00 0.00 2.27
2292 2966 6.560711 AGCTTGCGTTTTTCTTCTTCTAAAA 58.439 32.000 0.00 0.00 0.00 1.52
2293 2967 6.038271 AGAGCTTGCGTTTTTCTTCTTCTAAA 59.962 34.615 0.00 0.00 0.00 1.85
2294 2968 5.527582 AGAGCTTGCGTTTTTCTTCTTCTAA 59.472 36.000 0.00 0.00 0.00 2.10
2295 2969 5.057149 AGAGCTTGCGTTTTTCTTCTTCTA 58.943 37.500 0.00 0.00 0.00 2.10
2296 2970 3.879892 AGAGCTTGCGTTTTTCTTCTTCT 59.120 39.130 0.00 0.00 0.00 2.85
2297 2971 4.215201 GAGAGCTTGCGTTTTTCTTCTTC 58.785 43.478 0.00 0.00 0.00 2.87
2298 2972 3.627577 TGAGAGCTTGCGTTTTTCTTCTT 59.372 39.130 0.00 0.00 0.00 2.52
2299 2973 3.206150 TGAGAGCTTGCGTTTTTCTTCT 58.794 40.909 0.00 0.00 0.00 2.85
2300 2974 3.609103 TGAGAGCTTGCGTTTTTCTTC 57.391 42.857 0.00 0.00 0.00 2.87
2301 2975 4.370364 TTTGAGAGCTTGCGTTTTTCTT 57.630 36.364 0.00 0.00 0.00 2.52
2302 2976 4.105486 GTTTTGAGAGCTTGCGTTTTTCT 58.895 39.130 0.00 0.00 0.00 2.52
2303 2977 4.105486 AGTTTTGAGAGCTTGCGTTTTTC 58.895 39.130 0.00 0.00 0.00 2.29
2304 2978 4.105486 GAGTTTTGAGAGCTTGCGTTTTT 58.895 39.130 0.00 0.00 0.00 1.94
2305 2979 3.128589 TGAGTTTTGAGAGCTTGCGTTTT 59.871 39.130 0.00 0.00 0.00 2.43
2306 2980 2.682856 TGAGTTTTGAGAGCTTGCGTTT 59.317 40.909 0.00 0.00 0.00 3.60
2307 2981 2.288666 TGAGTTTTGAGAGCTTGCGTT 58.711 42.857 0.00 0.00 0.00 4.84
2308 2982 1.953559 TGAGTTTTGAGAGCTTGCGT 58.046 45.000 0.00 0.00 0.00 5.24
2309 2983 3.038710 GTTTGAGTTTTGAGAGCTTGCG 58.961 45.455 0.00 0.00 0.00 4.85
2310 2984 4.032703 TGTTTGAGTTTTGAGAGCTTGC 57.967 40.909 0.00 0.00 0.00 4.01
2311 2985 8.633075 TTATTTGTTTGAGTTTTGAGAGCTTG 57.367 30.769 0.00 0.00 0.00 4.01
2312 2986 7.922811 CCTTATTTGTTTGAGTTTTGAGAGCTT 59.077 33.333 0.00 0.00 0.00 3.74
2313 2987 7.428826 CCTTATTTGTTTGAGTTTTGAGAGCT 58.571 34.615 0.00 0.00 0.00 4.09
2314 2988 6.642540 CCCTTATTTGTTTGAGTTTTGAGAGC 59.357 38.462 0.00 0.00 0.00 4.09
2315 2989 6.642540 GCCCTTATTTGTTTGAGTTTTGAGAG 59.357 38.462 0.00 0.00 0.00 3.20
2316 2990 6.097554 TGCCCTTATTTGTTTGAGTTTTGAGA 59.902 34.615 0.00 0.00 0.00 3.27
2317 2991 6.279882 TGCCCTTATTTGTTTGAGTTTTGAG 58.720 36.000 0.00 0.00 0.00 3.02
2318 2992 6.227298 TGCCCTTATTTGTTTGAGTTTTGA 57.773 33.333 0.00 0.00 0.00 2.69
2319 2993 6.930722 AGATGCCCTTATTTGTTTGAGTTTTG 59.069 34.615 0.00 0.00 0.00 2.44
2320 2994 7.015584 AGAGATGCCCTTATTTGTTTGAGTTTT 59.984 33.333 0.00 0.00 0.00 2.43
2321 2995 6.494835 AGAGATGCCCTTATTTGTTTGAGTTT 59.505 34.615 0.00 0.00 0.00 2.66
2322 2996 6.012745 AGAGATGCCCTTATTTGTTTGAGTT 58.987 36.000 0.00 0.00 0.00 3.01
2323 2997 5.574188 AGAGATGCCCTTATTTGTTTGAGT 58.426 37.500 0.00 0.00 0.00 3.41
2324 2998 7.554118 TCTTAGAGATGCCCTTATTTGTTTGAG 59.446 37.037 0.00 0.00 0.00 3.02
2325 2999 7.336931 GTCTTAGAGATGCCCTTATTTGTTTGA 59.663 37.037 0.00 0.00 0.00 2.69
2326 3000 7.475840 GTCTTAGAGATGCCCTTATTTGTTTG 58.524 38.462 0.00 0.00 0.00 2.93
2327 3001 6.316390 CGTCTTAGAGATGCCCTTATTTGTTT 59.684 38.462 0.00 0.00 0.00 2.83
2328 3002 5.817816 CGTCTTAGAGATGCCCTTATTTGTT 59.182 40.000 0.00 0.00 0.00 2.83
2329 3003 5.360591 CGTCTTAGAGATGCCCTTATTTGT 58.639 41.667 0.00 0.00 0.00 2.83
2330 3004 4.752101 CCGTCTTAGAGATGCCCTTATTTG 59.248 45.833 0.00 0.00 29.93 2.32
2331 3005 4.654262 TCCGTCTTAGAGATGCCCTTATTT 59.346 41.667 0.00 0.00 29.93 1.40
2332 3006 4.039366 GTCCGTCTTAGAGATGCCCTTATT 59.961 45.833 0.00 0.00 29.93 1.40
2333 3007 3.574826 GTCCGTCTTAGAGATGCCCTTAT 59.425 47.826 0.00 0.00 29.93 1.73
2334 3008 2.957006 GTCCGTCTTAGAGATGCCCTTA 59.043 50.000 0.00 0.00 29.93 2.69
2335 3009 1.757699 GTCCGTCTTAGAGATGCCCTT 59.242 52.381 0.00 0.00 29.93 3.95
2336 3010 1.342076 TGTCCGTCTTAGAGATGCCCT 60.342 52.381 0.00 0.00 29.93 5.19
2337 3011 1.112113 TGTCCGTCTTAGAGATGCCC 58.888 55.000 0.00 0.00 29.93 5.36
2338 3012 1.534175 CGTGTCCGTCTTAGAGATGCC 60.534 57.143 0.00 0.00 29.93 4.40
2339 3013 1.828832 CGTGTCCGTCTTAGAGATGC 58.171 55.000 0.00 0.00 29.93 3.91
2340 3014 1.828832 GCGTGTCCGTCTTAGAGATG 58.171 55.000 0.00 0.00 36.15 2.90
2341 3015 0.377554 CGCGTGTCCGTCTTAGAGAT 59.622 55.000 0.00 0.00 36.15 2.75
2342 3016 0.671472 TCGCGTGTCCGTCTTAGAGA 60.671 55.000 5.77 0.00 36.15 3.10
2343 3017 0.167470 TTCGCGTGTCCGTCTTAGAG 59.833 55.000 5.77 0.00 36.15 2.43
2344 3018 0.110056 GTTCGCGTGTCCGTCTTAGA 60.110 55.000 5.77 0.00 36.15 2.10
2345 3019 1.069378 GGTTCGCGTGTCCGTCTTAG 61.069 60.000 5.77 0.00 36.15 2.18
2346 3020 1.081242 GGTTCGCGTGTCCGTCTTA 60.081 57.895 5.77 0.00 36.15 2.10
2347 3021 2.355481 GGTTCGCGTGTCCGTCTT 60.355 61.111 5.77 0.00 36.15 3.01
2348 3022 4.695231 CGGTTCGCGTGTCCGTCT 62.695 66.667 22.76 0.00 39.51 4.18
2366 3040 3.723235 CTGTCTGGACGGATGCGGG 62.723 68.421 12.44 0.00 40.06 6.13
2367 3041 2.202797 CTGTCTGGACGGATGCGG 60.203 66.667 12.44 0.00 40.06 5.69
2368 3042 2.887568 GCTGTCTGGACGGATGCG 60.888 66.667 4.58 4.58 40.06 4.73
2369 3043 2.887568 CGCTGTCTGGACGGATGC 60.888 66.667 13.09 5.94 40.06 3.91
2374 3048 2.027625 GGTTTCCGCTGTCTGGACG 61.028 63.158 0.00 0.00 34.56 4.79
2375 3049 0.321653 ATGGTTTCCGCTGTCTGGAC 60.322 55.000 0.00 0.00 34.56 4.02
2376 3050 0.400213 AATGGTTTCCGCTGTCTGGA 59.600 50.000 0.00 0.00 0.00 3.86
2377 3051 0.804989 GAATGGTTTCCGCTGTCTGG 59.195 55.000 0.00 0.00 0.00 3.86
2378 3052 1.522668 TGAATGGTTTCCGCTGTCTG 58.477 50.000 0.00 0.00 0.00 3.51
2379 3053 1.880027 GTTGAATGGTTTCCGCTGTCT 59.120 47.619 0.00 0.00 0.00 3.41
2380 3054 1.399727 CGTTGAATGGTTTCCGCTGTC 60.400 52.381 0.00 0.00 0.00 3.51
2381 3055 0.591170 CGTTGAATGGTTTCCGCTGT 59.409 50.000 0.00 0.00 0.00 4.40
2382 3056 0.591170 ACGTTGAATGGTTTCCGCTG 59.409 50.000 0.00 0.00 0.00 5.18
2383 3057 0.591170 CACGTTGAATGGTTTCCGCT 59.409 50.000 0.00 0.00 0.00 5.52
2384 3058 0.386731 CCACGTTGAATGGTTTCCGC 60.387 55.000 0.00 0.00 32.08 5.54
2385 3059 0.239879 CCCACGTTGAATGGTTTCCG 59.760 55.000 0.00 0.00 35.23 4.30
2386 3060 1.268625 GTCCCACGTTGAATGGTTTCC 59.731 52.381 0.00 0.00 35.23 3.13
2387 3061 2.031157 CAGTCCCACGTTGAATGGTTTC 60.031 50.000 4.77 0.00 35.23 2.78
2388 3062 1.953686 CAGTCCCACGTTGAATGGTTT 59.046 47.619 4.77 0.00 35.23 3.27
2389 3063 1.133915 ACAGTCCCACGTTGAATGGTT 60.134 47.619 14.51 0.00 35.23 3.67
2390 3064 0.472471 ACAGTCCCACGTTGAATGGT 59.528 50.000 14.51 1.27 35.23 3.55
2391 3065 2.465860 TACAGTCCCACGTTGAATGG 57.534 50.000 14.51 0.14 32.40 3.16
2392 3066 2.603110 CGATACAGTCCCACGTTGAATG 59.397 50.000 9.91 9.91 34.21 2.67
2393 3067 2.494471 TCGATACAGTCCCACGTTGAAT 59.506 45.455 0.00 0.00 0.00 2.57
2394 3068 1.887854 TCGATACAGTCCCACGTTGAA 59.112 47.619 0.00 0.00 0.00 2.69
2395 3069 1.536940 TCGATACAGTCCCACGTTGA 58.463 50.000 0.00 0.00 0.00 3.18
2396 3070 2.579207 ATCGATACAGTCCCACGTTG 57.421 50.000 0.00 0.00 0.00 4.10
2397 3071 3.018856 TGTATCGATACAGTCCCACGTT 58.981 45.455 29.79 0.00 38.28 3.99
2398 3072 2.646930 TGTATCGATACAGTCCCACGT 58.353 47.619 29.79 0.00 38.28 4.49
2399 3073 3.252458 TCATGTATCGATACAGTCCCACG 59.748 47.826 34.32 19.63 45.46 4.94
2400 3074 4.848562 TCATGTATCGATACAGTCCCAC 57.151 45.455 34.32 12.99 45.46 4.61
2401 3075 4.893524 ACTTCATGTATCGATACAGTCCCA 59.106 41.667 34.32 19.38 45.46 4.37
2402 3076 5.223382 CACTTCATGTATCGATACAGTCCC 58.777 45.833 34.32 11.95 45.46 4.46
2403 3077 5.221263 ACCACTTCATGTATCGATACAGTCC 60.221 44.000 34.32 12.61 45.46 3.85
2404 3078 5.833082 ACCACTTCATGTATCGATACAGTC 58.167 41.667 34.32 12.94 45.46 3.51
2405 3079 5.221263 GGACCACTTCATGTATCGATACAGT 60.221 44.000 34.32 26.27 45.46 3.55
2406 3080 5.223382 GGACCACTTCATGTATCGATACAG 58.777 45.833 34.32 26.59 45.46 2.74
2407 3081 4.261447 CGGACCACTTCATGTATCGATACA 60.261 45.833 33.83 33.83 46.21 2.29
2408 3082 4.227538 CGGACCACTTCATGTATCGATAC 58.772 47.826 25.48 25.48 0.00 2.24
2409 3083 3.254903 CCGGACCACTTCATGTATCGATA 59.745 47.826 0.00 0.00 0.00 2.92
2410 3084 2.035961 CCGGACCACTTCATGTATCGAT 59.964 50.000 2.16 2.16 0.00 3.59
2411 3085 1.407618 CCGGACCACTTCATGTATCGA 59.592 52.381 0.00 0.00 0.00 3.59
2412 3086 1.407618 TCCGGACCACTTCATGTATCG 59.592 52.381 0.00 0.00 0.00 2.92
2413 3087 2.798499 CGTCCGGACCACTTCATGTATC 60.798 54.545 28.52 0.00 0.00 2.24
2414 3088 1.136305 CGTCCGGACCACTTCATGTAT 59.864 52.381 28.52 0.00 0.00 2.29
2415 3089 0.528924 CGTCCGGACCACTTCATGTA 59.471 55.000 28.52 0.00 0.00 2.29
2416 3090 1.292223 CGTCCGGACCACTTCATGT 59.708 57.895 28.52 0.00 0.00 3.21
2417 3091 0.736325 GACGTCCGGACCACTTCATG 60.736 60.000 28.52 14.14 0.00 3.07
2418 3092 1.183030 TGACGTCCGGACCACTTCAT 61.183 55.000 28.52 5.57 0.00 2.57
2419 3093 1.183030 ATGACGTCCGGACCACTTCA 61.183 55.000 28.52 23.21 0.00 3.02
2420 3094 0.037605 AATGACGTCCGGACCACTTC 60.038 55.000 28.52 18.75 0.00 3.01
2421 3095 0.395312 AAATGACGTCCGGACCACTT 59.605 50.000 28.52 14.79 0.00 3.16
2422 3096 0.037605 GAAATGACGTCCGGACCACT 60.038 55.000 28.52 9.06 0.00 4.00
2423 3097 0.037605 AGAAATGACGTCCGGACCAC 60.038 55.000 28.52 21.39 0.00 4.16
2424 3098 0.682852 AAGAAATGACGTCCGGACCA 59.317 50.000 28.52 21.26 0.00 4.02
2425 3099 1.730612 GAAAGAAATGACGTCCGGACC 59.269 52.381 28.52 16.07 0.00 4.46
2426 3100 1.389106 CGAAAGAAATGACGTCCGGAC 59.611 52.381 25.28 25.28 0.00 4.79
2427 3101 1.000060 ACGAAAGAAATGACGTCCGGA 60.000 47.619 14.12 0.00 33.80 5.14
2428 3102 1.425412 ACGAAAGAAATGACGTCCGG 58.575 50.000 14.12 0.00 33.80 5.14
2429 3103 4.380290 GTTTACGAAAGAAATGACGTCCG 58.620 43.478 14.12 9.02 39.59 4.79
2430 3104 4.705492 GGTTTACGAAAGAAATGACGTCC 58.295 43.478 14.12 0.00 39.59 4.79
2445 3119 3.125316 TCACTTTTGTCTCCGGTTTACG 58.875 45.455 0.00 0.00 43.80 3.18
2446 3120 3.497262 CCTCACTTTTGTCTCCGGTTTAC 59.503 47.826 0.00 0.00 0.00 2.01
2447 3121 3.495453 CCCTCACTTTTGTCTCCGGTTTA 60.495 47.826 0.00 0.00 0.00 2.01
2448 3122 2.572290 CCTCACTTTTGTCTCCGGTTT 58.428 47.619 0.00 0.00 0.00 3.27
2449 3123 1.202770 CCCTCACTTTTGTCTCCGGTT 60.203 52.381 0.00 0.00 0.00 4.44
2450 3124 0.396811 CCCTCACTTTTGTCTCCGGT 59.603 55.000 0.00 0.00 0.00 5.28
2451 3125 0.685097 TCCCTCACTTTTGTCTCCGG 59.315 55.000 0.00 0.00 0.00 5.14
2452 3126 1.344763 ACTCCCTCACTTTTGTCTCCG 59.655 52.381 0.00 0.00 0.00 4.63
2453 3127 3.493767 AACTCCCTCACTTTTGTCTCC 57.506 47.619 0.00 0.00 0.00 3.71
2454 3128 5.470437 CCTAAAACTCCCTCACTTTTGTCTC 59.530 44.000 0.00 0.00 0.00 3.36
2455 3129 5.377478 CCTAAAACTCCCTCACTTTTGTCT 58.623 41.667 0.00 0.00 0.00 3.41
2456 3130 4.519350 CCCTAAAACTCCCTCACTTTTGTC 59.481 45.833 0.00 0.00 0.00 3.18
2457 3131 4.079385 ACCCTAAAACTCCCTCACTTTTGT 60.079 41.667 0.00 0.00 0.00 2.83
2458 3132 4.470602 ACCCTAAAACTCCCTCACTTTTG 58.529 43.478 0.00 0.00 0.00 2.44
2459 3133 4.808767 ACCCTAAAACTCCCTCACTTTT 57.191 40.909 0.00 0.00 0.00 2.27
2460 3134 4.912133 ACTACCCTAAAACTCCCTCACTTT 59.088 41.667 0.00 0.00 0.00 2.66
2461 3135 4.500452 ACTACCCTAAAACTCCCTCACTT 58.500 43.478 0.00 0.00 0.00 3.16
2462 3136 4.143406 ACTACCCTAAAACTCCCTCACT 57.857 45.455 0.00 0.00 0.00 3.41
2463 3137 4.285260 TGAACTACCCTAAAACTCCCTCAC 59.715 45.833 0.00 0.00 0.00 3.51
2464 3138 4.285260 GTGAACTACCCTAAAACTCCCTCA 59.715 45.833 0.00 0.00 0.00 3.86
2465 3139 4.323333 GGTGAACTACCCTAAAACTCCCTC 60.323 50.000 0.00 0.00 44.15 4.30
2466 3140 3.586174 GGTGAACTACCCTAAAACTCCCT 59.414 47.826 0.00 0.00 44.15 4.20
2467 3141 3.947868 GGTGAACTACCCTAAAACTCCC 58.052 50.000 0.00 0.00 44.15 4.30
2479 3153 0.037605 CGTCCCTGGTGGTGAACTAC 60.038 60.000 0.00 0.00 34.77 2.73
2480 3154 0.178955 TCGTCCCTGGTGGTGAACTA 60.179 55.000 0.00 0.00 34.77 2.24
2481 3155 1.052124 TTCGTCCCTGGTGGTGAACT 61.052 55.000 0.00 0.00 34.77 3.01
2482 3156 0.602905 CTTCGTCCCTGGTGGTGAAC 60.603 60.000 0.00 0.00 34.77 3.18
2483 3157 1.752198 CTTCGTCCCTGGTGGTGAA 59.248 57.895 0.00 0.00 34.77 3.18
2484 3158 2.879233 GCTTCGTCCCTGGTGGTGA 61.879 63.158 0.00 0.00 34.77 4.02
2485 3159 1.541310 TAGCTTCGTCCCTGGTGGTG 61.541 60.000 0.00 0.00 34.77 4.17
2486 3160 1.229082 TAGCTTCGTCCCTGGTGGT 60.229 57.895 0.00 0.00 34.77 4.16
2487 3161 0.970937 TCTAGCTTCGTCCCTGGTGG 60.971 60.000 0.00 0.00 0.00 4.61
2488 3162 0.895530 TTCTAGCTTCGTCCCTGGTG 59.104 55.000 0.00 0.00 0.00 4.17
2489 3163 1.640917 TTTCTAGCTTCGTCCCTGGT 58.359 50.000 0.00 0.00 0.00 4.00
2490 3164 2.762535 TTTTCTAGCTTCGTCCCTGG 57.237 50.000 0.00 0.00 0.00 4.45
2507 3181 3.320826 GGTTGACACCAGTGCCTATTTTT 59.679 43.478 0.00 0.00 43.61 1.94
2508 3182 2.890945 GGTTGACACCAGTGCCTATTTT 59.109 45.455 0.00 0.00 43.61 1.82
2509 3183 2.514803 GGTTGACACCAGTGCCTATTT 58.485 47.619 0.00 0.00 43.61 1.40
2510 3184 1.610624 CGGTTGACACCAGTGCCTATT 60.611 52.381 0.00 0.00 44.53 1.73
2511 3185 0.036388 CGGTTGACACCAGTGCCTAT 60.036 55.000 0.00 0.00 44.53 2.57
2512 3186 1.369692 CGGTTGACACCAGTGCCTA 59.630 57.895 0.00 0.00 44.53 3.93
2513 3187 2.111043 CGGTTGACACCAGTGCCT 59.889 61.111 0.00 0.00 44.53 4.75
2514 3188 1.822186 AACGGTTGACACCAGTGCC 60.822 57.895 0.00 0.00 44.53 5.01
2515 3189 1.355210 CAACGGTTGACACCAGTGC 59.645 57.895 15.66 0.00 44.53 4.40
2516 3190 1.355210 GCAACGGTTGACACCAGTG 59.645 57.895 24.20 0.00 44.53 3.66
2517 3191 1.822186 GGCAACGGTTGACACCAGT 60.822 57.895 24.20 0.00 44.53 4.00
2518 3192 2.551912 GGGCAACGGTTGACACCAG 61.552 63.158 26.71 0.00 44.53 4.00
2519 3193 2.517402 GGGCAACGGTTGACACCA 60.517 61.111 26.71 0.00 44.53 4.17
2520 3194 2.517402 TGGGCAACGGTTGACACC 60.517 61.111 26.71 21.36 41.76 4.16
2521 3195 1.658686 TTGTGGGCAACGGTTGACAC 61.659 55.000 26.71 27.22 41.76 3.67
2522 3196 0.753479 ATTGTGGGCAACGGTTGACA 60.753 50.000 26.71 19.06 41.76 3.58
2523 3197 0.387565 AATTGTGGGCAACGGTTGAC 59.612 50.000 24.20 21.43 37.44 3.18
2524 3198 0.387202 CAATTGTGGGCAACGGTTGA 59.613 50.000 24.20 2.59 37.44 3.18
2525 3199 1.220817 GCAATTGTGGGCAACGGTTG 61.221 55.000 16.35 16.35 37.44 3.77
2526 3200 1.068921 GCAATTGTGGGCAACGGTT 59.931 52.632 7.40 0.00 37.44 4.44
2527 3201 1.680522 TTGCAATTGTGGGCAACGGT 61.681 50.000 7.40 0.00 44.41 4.83
2528 3202 1.068753 TTGCAATTGTGGGCAACGG 59.931 52.632 7.40 0.00 44.41 4.44
2529 3203 4.746361 TTGCAATTGTGGGCAACG 57.254 50.000 7.40 0.00 44.41 4.10
2532 3206 4.822685 ATAATCTTTGCAATTGTGGGCA 57.177 36.364 7.40 0.00 38.46 5.36
2533 3207 7.790823 ATTTATAATCTTTGCAATTGTGGGC 57.209 32.000 7.40 0.00 0.00 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.