Multiple sequence alignment - TraesCS2B01G541700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G541700 chr2B 100.000 2258 0 0 1 2258 738174992 738177249 0.000000e+00 4170.0
1 TraesCS2B01G541700 chr2B 86.692 263 29 4 1000 1262 737870950 737871206 1.020000e-73 287.0
2 TraesCS2B01G541700 chr2B 88.462 182 19 2 993 1173 737635268 737635448 3.780000e-53 219.0
3 TraesCS2B01G541700 chr2B 87.363 182 21 2 993 1173 737686244 737686424 8.170000e-50 207.0
4 TraesCS2B01G541700 chr2D 85.294 1360 91 47 405 1736 606636656 606637934 0.000000e+00 1303.0
5 TraesCS2B01G541700 chr2D 89.514 391 24 8 1792 2170 606638093 606638478 1.570000e-131 479.0
6 TraesCS2B01G541700 chr2D 87.072 263 28 4 1000 1262 606625608 606625864 2.190000e-75 292.0
7 TraesCS2B01G541700 chr2D 87.562 201 21 4 993 1190 606514346 606514545 1.740000e-56 230.0
8 TraesCS2B01G541700 chr2A 87.775 1047 54 35 742 1760 738202344 738203344 0.000000e+00 1157.0
9 TraesCS2B01G541700 chr2A 86.095 525 45 15 1652 2161 376996717 376996206 7.100000e-150 540.0
10 TraesCS2B01G541700 chr2A 92.447 331 19 4 1874 2202 738203334 738203660 3.400000e-128 468.0
11 TraesCS2B01G541700 chr2A 86.692 263 32 1 1000 1262 738143963 738144222 2.840000e-74 289.0
12 TraesCS2B01G541700 chr2A 86.567 201 23 4 993 1190 738040328 738040527 3.780000e-53 219.0
13 TraesCS2B01G541700 chr5A 84.871 661 62 23 1520 2161 306999341 306998700 1.140000e-177 632.0
14 TraesCS2B01G541700 chr3B 80.537 149 22 7 261 406 635165177 635165033 8.530000e-20 108.0
15 TraesCS2B01G541700 chr3B 92.308 39 1 2 366 403 719122671 719122634 1.000000e-03 54.7
16 TraesCS2B01G541700 chr1B 85.047 107 12 4 298 403 382232292 382232189 3.070000e-19 106.0
17 TraesCS2B01G541700 chr4B 78.981 157 17 8 261 403 89720224 89720070 2.390000e-15 93.5
18 TraesCS2B01G541700 chr6B 78.667 150 20 7 262 404 95187199 95187343 3.090000e-14 89.8
19 TraesCS2B01G541700 chr6B 76.923 156 20 7 262 403 609926324 609926171 8.650000e-10 75.0
20 TraesCS2B01G541700 chr7B 78.205 156 20 5 262 404 412913752 412913906 1.110000e-13 87.9
21 TraesCS2B01G541700 chr7B 77.564 156 19 7 262 403 598410136 598410289 1.860000e-11 80.5
22 TraesCS2B01G541700 chr7B 77.070 157 20 8 262 404 480005333 480005487 2.400000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G541700 chr2B 738174992 738177249 2257 False 4170.0 4170 100.000 1 2258 1 chr2B.!!$F4 2257
1 TraesCS2B01G541700 chr2D 606636656 606638478 1822 False 891.0 1303 87.404 405 2170 2 chr2D.!!$F3 1765
2 TraesCS2B01G541700 chr2A 738202344 738203660 1316 False 812.5 1157 90.111 742 2202 2 chr2A.!!$F3 1460
3 TraesCS2B01G541700 chr2A 376996206 376996717 511 True 540.0 540 86.095 1652 2161 1 chr2A.!!$R1 509
4 TraesCS2B01G541700 chr5A 306998700 306999341 641 True 632.0 632 84.871 1520 2161 1 chr5A.!!$R1 641


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
313 314 0.038343 TTCGGGCTGCAAATCAAAGC 60.038 50.0 0.50 0.00 36.17 3.51 F
321 322 0.179153 GCAAATCAAAGCTCGAGCCC 60.179 55.0 32.94 7.95 43.38 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1195 1224 0.308684 TCGTTATCGTCGCGGCTTAT 59.691 50.0 9.9 4.76 38.33 1.73 R
1338 1381 0.460284 ACGCTCGGGAATACTGCAAG 60.460 55.0 0.0 0.00 42.29 4.01 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.129737 CCACCGTCGGCGAGATGT 62.130 66.667 12.93 4.76 41.33 3.06
22 23 2.880879 CACCGTCGGCGAGATGTG 60.881 66.667 12.93 14.22 41.33 3.21
23 24 4.129737 ACCGTCGGCGAGATGTGG 62.130 66.667 12.93 10.14 41.33 4.17
24 25 4.129737 CCGTCGGCGAGATGTGGT 62.130 66.667 12.93 0.00 41.33 4.16
25 26 2.579787 CGTCGGCGAGATGTGGTC 60.580 66.667 11.20 0.00 41.33 4.02
26 27 2.571757 GTCGGCGAGATGTGGTCA 59.428 61.111 11.20 0.00 0.00 4.02
27 28 1.517257 GTCGGCGAGATGTGGTCAG 60.517 63.158 11.20 0.00 0.00 3.51
28 29 2.202797 CGGCGAGATGTGGTCAGG 60.203 66.667 0.00 0.00 0.00 3.86
29 30 2.710902 CGGCGAGATGTGGTCAGGA 61.711 63.158 0.00 0.00 0.00 3.86
30 31 1.153549 GGCGAGATGTGGTCAGGAC 60.154 63.158 0.00 0.00 0.00 3.85
31 32 1.608717 GGCGAGATGTGGTCAGGACT 61.609 60.000 0.00 0.00 0.00 3.85
32 33 0.179124 GCGAGATGTGGTCAGGACTC 60.179 60.000 0.00 0.00 0.00 3.36
33 34 1.177401 CGAGATGTGGTCAGGACTCA 58.823 55.000 0.00 0.63 0.00 3.41
34 35 1.546029 CGAGATGTGGTCAGGACTCAA 59.454 52.381 0.00 0.00 0.00 3.02
35 36 2.416566 CGAGATGTGGTCAGGACTCAAG 60.417 54.545 0.00 0.00 0.00 3.02
36 37 2.828520 GAGATGTGGTCAGGACTCAAGA 59.171 50.000 0.00 0.00 0.00 3.02
37 38 2.564947 AGATGTGGTCAGGACTCAAGAC 59.435 50.000 0.00 0.00 0.00 3.01
38 39 2.088104 TGTGGTCAGGACTCAAGACT 57.912 50.000 0.00 0.00 32.98 3.24
39 40 1.688735 TGTGGTCAGGACTCAAGACTG 59.311 52.381 0.00 0.00 32.98 3.51
40 41 1.964223 GTGGTCAGGACTCAAGACTGA 59.036 52.381 0.00 0.00 38.80 3.41
53 54 4.923415 TCAAGACTGAGAGTGAGGATACA 58.077 43.478 0.00 0.00 41.41 2.29
54 55 4.946772 TCAAGACTGAGAGTGAGGATACAG 59.053 45.833 0.00 0.00 41.41 2.74
55 56 4.584638 AGACTGAGAGTGAGGATACAGT 57.415 45.455 0.00 0.00 40.49 3.55
56 57 4.269183 AGACTGAGAGTGAGGATACAGTG 58.731 47.826 0.00 0.00 38.43 3.66
57 58 3.360867 ACTGAGAGTGAGGATACAGTGG 58.639 50.000 0.00 0.00 37.24 4.00
58 59 3.010696 ACTGAGAGTGAGGATACAGTGGA 59.989 47.826 0.00 0.00 37.24 4.02
59 60 3.625853 TGAGAGTGAGGATACAGTGGAG 58.374 50.000 0.00 0.00 41.41 3.86
60 61 3.267031 TGAGAGTGAGGATACAGTGGAGA 59.733 47.826 0.00 0.00 41.41 3.71
61 62 3.626930 AGAGTGAGGATACAGTGGAGAC 58.373 50.000 0.00 0.00 41.41 3.36
62 63 2.356382 GAGTGAGGATACAGTGGAGACG 59.644 54.545 0.00 0.00 41.41 4.18
63 64 2.093106 GTGAGGATACAGTGGAGACGT 58.907 52.381 0.00 0.00 41.41 4.34
64 65 2.092323 TGAGGATACAGTGGAGACGTG 58.908 52.381 0.00 0.00 41.41 4.49
65 66 1.405821 GAGGATACAGTGGAGACGTGG 59.594 57.143 0.00 0.00 41.41 4.94
66 67 0.460311 GGATACAGTGGAGACGTGGG 59.540 60.000 0.00 0.00 0.00 4.61
67 68 0.460311 GATACAGTGGAGACGTGGGG 59.540 60.000 0.00 0.00 0.00 4.96
68 69 0.976073 ATACAGTGGAGACGTGGGGG 60.976 60.000 0.00 0.00 0.00 5.40
69 70 2.084089 TACAGTGGAGACGTGGGGGA 62.084 60.000 0.00 0.00 0.00 4.81
70 71 2.203182 AGTGGAGACGTGGGGGAA 59.797 61.111 0.00 0.00 0.00 3.97
71 72 1.460689 AGTGGAGACGTGGGGGAAA 60.461 57.895 0.00 0.00 0.00 3.13
72 73 1.003718 GTGGAGACGTGGGGGAAAG 60.004 63.158 0.00 0.00 0.00 2.62
73 74 2.221299 TGGAGACGTGGGGGAAAGG 61.221 63.158 0.00 0.00 0.00 3.11
74 75 2.669240 GAGACGTGGGGGAAAGGG 59.331 66.667 0.00 0.00 0.00 3.95
75 76 3.623703 GAGACGTGGGGGAAAGGGC 62.624 68.421 0.00 0.00 0.00 5.19
79 80 4.280019 GTGGGGGAAAGGGCGTGT 62.280 66.667 0.00 0.00 0.00 4.49
80 81 4.278513 TGGGGGAAAGGGCGTGTG 62.279 66.667 0.00 0.00 0.00 3.82
81 82 3.961414 GGGGGAAAGGGCGTGTGA 61.961 66.667 0.00 0.00 0.00 3.58
82 83 2.671963 GGGGAAAGGGCGTGTGAC 60.672 66.667 0.00 0.00 0.00 3.67
83 84 3.047877 GGGAAAGGGCGTGTGACG 61.048 66.667 0.00 0.00 45.88 4.35
84 85 3.047877 GGAAAGGGCGTGTGACGG 61.048 66.667 0.00 0.00 42.82 4.79
91 92 4.065281 GCGTGTGACGGCTAGGGT 62.065 66.667 0.00 0.00 42.82 4.34
92 93 2.654877 CGTGTGACGGCTAGGGTT 59.345 61.111 0.00 0.00 38.08 4.11
93 94 1.885157 CGTGTGACGGCTAGGGTTA 59.115 57.895 0.00 0.00 38.08 2.85
94 95 0.179145 CGTGTGACGGCTAGGGTTAG 60.179 60.000 0.00 0.00 38.08 2.34
107 108 5.476091 CTAGGGTTAGCTAATTGAGGGAG 57.524 47.826 9.88 0.00 0.00 4.30
108 109 4.008916 AGGGTTAGCTAATTGAGGGAGA 57.991 45.455 9.88 0.00 0.00 3.71
109 110 3.970640 AGGGTTAGCTAATTGAGGGAGAG 59.029 47.826 9.88 0.00 0.00 3.20
110 111 3.071747 GGGTTAGCTAATTGAGGGAGAGG 59.928 52.174 9.88 0.00 0.00 3.69
111 112 3.495276 GGTTAGCTAATTGAGGGAGAGGC 60.495 52.174 9.88 0.00 0.00 4.70
112 113 1.885049 AGCTAATTGAGGGAGAGGCA 58.115 50.000 0.00 0.00 0.00 4.75
113 114 2.416638 AGCTAATTGAGGGAGAGGCAT 58.583 47.619 0.00 0.00 0.00 4.40
114 115 3.591789 AGCTAATTGAGGGAGAGGCATA 58.408 45.455 0.00 0.00 0.00 3.14
115 116 4.174383 AGCTAATTGAGGGAGAGGCATAT 58.826 43.478 0.00 0.00 0.00 1.78
116 117 4.019501 AGCTAATTGAGGGAGAGGCATATG 60.020 45.833 0.00 0.00 0.00 1.78
117 118 3.803186 AATTGAGGGAGAGGCATATGG 57.197 47.619 4.56 0.00 0.00 2.74
118 119 0.767375 TTGAGGGAGAGGCATATGGC 59.233 55.000 21.09 21.09 43.74 4.40
119 120 1.294780 GAGGGAGAGGCATATGGCG 59.705 63.158 22.17 0.00 46.16 5.69
120 121 2.359230 GGGAGAGGCATATGGCGC 60.359 66.667 22.78 22.78 46.16 6.53
124 125 2.111878 GAGGCATATGGCGCTGGT 59.888 61.111 22.93 6.71 46.16 4.00
125 126 2.203252 AGGCATATGGCGCTGGTG 60.203 61.111 22.17 2.67 46.16 4.17
126 127 2.516930 GGCATATGGCGCTGGTGT 60.517 61.111 14.11 0.00 46.16 4.16
127 128 2.717485 GCATATGGCGCTGGTGTG 59.283 61.111 7.64 3.48 0.00 3.82
128 129 2.837883 GCATATGGCGCTGGTGTGG 61.838 63.158 7.64 0.00 0.00 4.17
129 130 1.451927 CATATGGCGCTGGTGTGGT 60.452 57.895 7.64 0.00 0.00 4.16
130 131 1.153168 ATATGGCGCTGGTGTGGTC 60.153 57.895 7.64 0.00 0.00 4.02
131 132 2.923426 ATATGGCGCTGGTGTGGTCG 62.923 60.000 7.64 0.00 0.00 4.79
133 134 4.760047 GGCGCTGGTGTGGTCGAT 62.760 66.667 7.64 0.00 0.00 3.59
134 135 2.742372 GCGCTGGTGTGGTCGATT 60.742 61.111 0.00 0.00 0.00 3.34
135 136 2.325082 GCGCTGGTGTGGTCGATTT 61.325 57.895 0.00 0.00 0.00 2.17
136 137 1.497278 CGCTGGTGTGGTCGATTTG 59.503 57.895 0.00 0.00 0.00 2.32
137 138 1.227999 CGCTGGTGTGGTCGATTTGT 61.228 55.000 0.00 0.00 0.00 2.83
138 139 0.951558 GCTGGTGTGGTCGATTTGTT 59.048 50.000 0.00 0.00 0.00 2.83
139 140 1.334960 GCTGGTGTGGTCGATTTGTTG 60.335 52.381 0.00 0.00 0.00 3.33
140 141 1.266718 CTGGTGTGGTCGATTTGTTGG 59.733 52.381 0.00 0.00 0.00 3.77
141 142 0.596082 GGTGTGGTCGATTTGTTGGG 59.404 55.000 0.00 0.00 0.00 4.12
142 143 1.314730 GTGTGGTCGATTTGTTGGGT 58.685 50.000 0.00 0.00 0.00 4.51
143 144 1.679153 GTGTGGTCGATTTGTTGGGTT 59.321 47.619 0.00 0.00 0.00 4.11
144 145 1.678627 TGTGGTCGATTTGTTGGGTTG 59.321 47.619 0.00 0.00 0.00 3.77
145 146 1.000717 GTGGTCGATTTGTTGGGTTGG 60.001 52.381 0.00 0.00 0.00 3.77
146 147 0.601057 GGTCGATTTGTTGGGTTGGG 59.399 55.000 0.00 0.00 0.00 4.12
147 148 0.038618 GTCGATTTGTTGGGTTGGGC 60.039 55.000 0.00 0.00 0.00 5.36
148 149 1.182385 TCGATTTGTTGGGTTGGGCC 61.182 55.000 0.00 0.00 0.00 5.80
149 150 1.184970 CGATTTGTTGGGTTGGGCCT 61.185 55.000 4.53 0.00 37.43 5.19
150 151 1.055849 GATTTGTTGGGTTGGGCCTT 58.944 50.000 4.53 0.00 37.43 4.35
151 152 1.001974 GATTTGTTGGGTTGGGCCTTC 59.998 52.381 4.53 0.00 37.43 3.46
152 153 0.325671 TTTGTTGGGTTGGGCCTTCA 60.326 50.000 4.53 0.00 37.43 3.02
153 154 1.045911 TTGTTGGGTTGGGCCTTCAC 61.046 55.000 4.53 0.00 37.43 3.18
154 155 1.456705 GTTGGGTTGGGCCTTCACA 60.457 57.895 4.53 1.71 37.43 3.58
155 156 0.831711 GTTGGGTTGGGCCTTCACAT 60.832 55.000 4.53 0.00 37.43 3.21
156 157 0.105246 TTGGGTTGGGCCTTCACATT 60.105 50.000 4.53 0.00 37.43 2.71
157 158 0.541764 TGGGTTGGGCCTTCACATTC 60.542 55.000 4.53 0.00 37.43 2.67
158 159 1.257750 GGGTTGGGCCTTCACATTCC 61.258 60.000 4.53 0.00 37.43 3.01
159 160 0.541764 GGTTGGGCCTTCACATTCCA 60.542 55.000 4.53 0.00 0.00 3.53
160 161 0.890683 GTTGGGCCTTCACATTCCAG 59.109 55.000 4.53 0.00 0.00 3.86
161 162 0.776810 TTGGGCCTTCACATTCCAGA 59.223 50.000 4.53 0.00 0.00 3.86
162 163 1.002069 TGGGCCTTCACATTCCAGAT 58.998 50.000 4.53 0.00 0.00 2.90
163 164 1.064463 TGGGCCTTCACATTCCAGATC 60.064 52.381 4.53 0.00 0.00 2.75
164 165 1.064463 GGGCCTTCACATTCCAGATCA 60.064 52.381 0.84 0.00 0.00 2.92
165 166 2.621407 GGGCCTTCACATTCCAGATCAA 60.621 50.000 0.84 0.00 0.00 2.57
166 167 2.686915 GGCCTTCACATTCCAGATCAAG 59.313 50.000 0.00 0.00 0.00 3.02
167 168 2.686915 GCCTTCACATTCCAGATCAAGG 59.313 50.000 0.00 0.00 33.40 3.61
168 169 3.623203 GCCTTCACATTCCAGATCAAGGA 60.623 47.826 6.82 5.06 32.16 3.36
176 177 4.327982 TTCCAGATCAAGGAATCTAGCG 57.672 45.455 13.79 0.00 40.11 4.26
177 178 3.566351 TCCAGATCAAGGAATCTAGCGA 58.434 45.455 4.58 0.00 34.21 4.93
178 179 3.319405 TCCAGATCAAGGAATCTAGCGAC 59.681 47.826 4.58 0.00 34.21 5.19
179 180 3.304257 CAGATCAAGGAATCTAGCGACG 58.696 50.000 0.00 0.00 34.21 5.12
180 181 2.294791 AGATCAAGGAATCTAGCGACGG 59.705 50.000 0.00 0.00 34.21 4.79
181 182 0.102481 TCAAGGAATCTAGCGACGGC 59.898 55.000 0.00 0.00 40.37 5.68
182 183 0.876342 CAAGGAATCTAGCGACGGCC 60.876 60.000 0.00 0.00 41.24 6.13
183 184 2.029221 GGAATCTAGCGACGGCCC 59.971 66.667 0.00 0.00 41.24 5.80
184 185 2.792947 GGAATCTAGCGACGGCCCA 61.793 63.158 0.00 0.00 41.24 5.36
185 186 1.367840 GAATCTAGCGACGGCCCAT 59.632 57.895 0.00 0.00 41.24 4.00
186 187 0.601558 GAATCTAGCGACGGCCCATA 59.398 55.000 0.00 0.00 41.24 2.74
187 188 0.317479 AATCTAGCGACGGCCCATAC 59.683 55.000 0.00 0.00 41.24 2.39
188 189 1.863662 ATCTAGCGACGGCCCATACG 61.864 60.000 0.00 0.00 41.24 3.06
192 193 4.805231 CGACGGCCCATACGCACA 62.805 66.667 0.00 0.00 34.00 4.57
193 194 2.890474 GACGGCCCATACGCACAG 60.890 66.667 0.00 0.00 34.00 3.66
194 195 3.365291 GACGGCCCATACGCACAGA 62.365 63.158 0.00 0.00 34.00 3.41
195 196 2.125310 CGGCCCATACGCACAGAA 60.125 61.111 0.00 0.00 0.00 3.02
196 197 2.461110 CGGCCCATACGCACAGAAC 61.461 63.158 0.00 0.00 0.00 3.01
197 198 1.376683 GGCCCATACGCACAGAACA 60.377 57.895 0.00 0.00 0.00 3.18
198 199 0.958382 GGCCCATACGCACAGAACAA 60.958 55.000 0.00 0.00 0.00 2.83
199 200 1.094785 GCCCATACGCACAGAACAAT 58.905 50.000 0.00 0.00 0.00 2.71
200 201 1.064060 GCCCATACGCACAGAACAATC 59.936 52.381 0.00 0.00 0.00 2.67
201 202 2.355197 CCCATACGCACAGAACAATCA 58.645 47.619 0.00 0.00 0.00 2.57
202 203 2.746904 CCCATACGCACAGAACAATCAA 59.253 45.455 0.00 0.00 0.00 2.57
203 204 3.426159 CCCATACGCACAGAACAATCAAC 60.426 47.826 0.00 0.00 0.00 3.18
204 205 3.426159 CCATACGCACAGAACAATCAACC 60.426 47.826 0.00 0.00 0.00 3.77
205 206 1.674359 ACGCACAGAACAATCAACCA 58.326 45.000 0.00 0.00 0.00 3.67
206 207 1.333619 ACGCACAGAACAATCAACCAC 59.666 47.619 0.00 0.00 0.00 4.16
207 208 1.603802 CGCACAGAACAATCAACCACT 59.396 47.619 0.00 0.00 0.00 4.00
208 209 2.602933 CGCACAGAACAATCAACCACTG 60.603 50.000 0.00 0.00 0.00 3.66
209 210 2.358898 GCACAGAACAATCAACCACTGT 59.641 45.455 0.00 0.00 38.79 3.55
210 211 3.563808 GCACAGAACAATCAACCACTGTA 59.436 43.478 0.00 0.00 36.94 2.74
211 212 4.554723 GCACAGAACAATCAACCACTGTAC 60.555 45.833 0.00 0.00 36.94 2.90
212 213 4.574421 CACAGAACAATCAACCACTGTACA 59.426 41.667 0.00 0.00 36.94 2.90
213 214 4.816385 ACAGAACAATCAACCACTGTACAG 59.184 41.667 21.44 21.44 36.94 2.74
214 215 4.214119 CAGAACAATCAACCACTGTACAGG 59.786 45.833 26.12 13.39 0.00 4.00
215 216 3.857157 ACAATCAACCACTGTACAGGT 57.143 42.857 26.12 14.07 40.61 4.00
217 218 4.532834 ACAATCAACCACTGTACAGGTTT 58.467 39.130 26.12 12.97 45.46 3.27
218 219 4.953579 ACAATCAACCACTGTACAGGTTTT 59.046 37.500 26.12 12.63 45.46 2.43
219 220 6.123651 ACAATCAACCACTGTACAGGTTTTA 58.876 36.000 26.12 12.94 45.46 1.52
220 221 6.262273 ACAATCAACCACTGTACAGGTTTTAG 59.738 38.462 26.12 11.12 45.46 1.85
221 222 5.617528 TCAACCACTGTACAGGTTTTAGA 57.382 39.130 26.12 13.01 45.46 2.10
222 223 5.362263 TCAACCACTGTACAGGTTTTAGAC 58.638 41.667 26.12 0.00 45.46 2.59
223 224 5.104859 TCAACCACTGTACAGGTTTTAGACA 60.105 40.000 26.12 0.00 45.46 3.41
224 225 5.562298 ACCACTGTACAGGTTTTAGACAT 57.438 39.130 26.12 0.00 33.39 3.06
225 226 5.937111 ACCACTGTACAGGTTTTAGACATT 58.063 37.500 26.12 0.00 33.39 2.71
226 227 6.362248 ACCACTGTACAGGTTTTAGACATTT 58.638 36.000 26.12 0.00 33.39 2.32
227 228 6.831868 ACCACTGTACAGGTTTTAGACATTTT 59.168 34.615 26.12 0.00 33.39 1.82
228 229 7.012989 ACCACTGTACAGGTTTTAGACATTTTC 59.987 37.037 26.12 0.00 33.39 2.29
229 230 7.069569 CACTGTACAGGTTTTAGACATTTTCG 58.930 38.462 26.12 0.00 0.00 3.46
230 231 6.204108 ACTGTACAGGTTTTAGACATTTTCGG 59.796 38.462 26.12 0.00 0.00 4.30
231 232 5.470777 TGTACAGGTTTTAGACATTTTCGGG 59.529 40.000 0.00 0.00 0.00 5.14
232 233 3.254903 ACAGGTTTTAGACATTTTCGGGC 59.745 43.478 0.00 0.00 0.00 6.13
233 234 2.823747 AGGTTTTAGACATTTTCGGGCC 59.176 45.455 0.00 0.00 0.00 5.80
234 235 2.414957 GGTTTTAGACATTTTCGGGCCG 60.415 50.000 22.51 22.51 0.00 6.13
235 236 2.476126 TTTAGACATTTTCGGGCCGA 57.524 45.000 27.46 27.46 0.00 5.54
236 237 2.018542 TTAGACATTTTCGGGCCGAG 57.981 50.000 29.30 19.58 37.14 4.63
237 238 0.461339 TAGACATTTTCGGGCCGAGC 60.461 55.000 29.30 14.54 37.14 5.03
251 252 3.930012 GAGCCGGGCCGAGCTAAT 61.930 66.667 32.08 17.42 40.11 1.73
252 253 3.462199 GAGCCGGGCCGAGCTAATT 62.462 63.158 32.08 17.11 40.11 1.40
253 254 2.516225 GCCGGGCCGAGCTAATTT 60.516 61.111 30.79 0.00 0.00 1.82
254 255 2.543802 GCCGGGCCGAGCTAATTTC 61.544 63.158 30.79 0.51 0.00 2.17
255 256 2.244651 CCGGGCCGAGCTAATTTCG 61.245 63.158 30.79 1.58 37.78 3.46
273 274 3.945981 TCGGGTTGAAAATTAAAGCCC 57.054 42.857 6.00 4.61 40.16 5.19
275 276 3.945981 GGGTTGAAAATTAAAGCCCGA 57.054 42.857 0.67 0.00 37.87 5.14
276 277 3.845178 GGGTTGAAAATTAAAGCCCGAG 58.155 45.455 0.67 0.00 37.87 4.63
277 278 3.250744 GGTTGAAAATTAAAGCCCGAGC 58.749 45.455 0.00 0.00 40.32 5.03
278 279 3.250744 GTTGAAAATTAAAGCCCGAGCC 58.749 45.455 0.00 0.00 41.25 4.70
279 280 2.802719 TGAAAATTAAAGCCCGAGCCT 58.197 42.857 0.00 0.00 41.25 4.58
280 281 2.491693 TGAAAATTAAAGCCCGAGCCTG 59.508 45.455 0.00 0.00 41.25 4.85
281 282 1.474330 AAATTAAAGCCCGAGCCTGG 58.526 50.000 0.00 0.00 41.25 4.45
291 292 4.115199 GAGCCTGGCCCGGATGTT 62.115 66.667 18.87 0.00 0.00 2.71
292 293 2.690881 AGCCTGGCCCGGATGTTA 60.691 61.111 18.87 0.00 0.00 2.41
293 294 2.516225 GCCTGGCCCGGATGTTAC 60.516 66.667 18.87 0.00 0.00 2.50
294 295 3.043999 GCCTGGCCCGGATGTTACT 62.044 63.158 18.87 0.00 0.00 2.24
295 296 1.607612 CCTGGCCCGGATGTTACTT 59.392 57.895 7.60 0.00 0.00 2.24
296 297 0.463833 CCTGGCCCGGATGTTACTTC 60.464 60.000 7.60 0.00 0.00 3.01
297 298 0.810031 CTGGCCCGGATGTTACTTCG 60.810 60.000 0.73 0.00 0.00 3.79
298 299 1.523032 GGCCCGGATGTTACTTCGG 60.523 63.158 0.73 0.00 41.90 4.30
300 301 4.120085 CCGGATGTTACTTCGGGC 57.880 61.111 10.84 0.00 38.93 6.13
301 302 1.520666 CCGGATGTTACTTCGGGCT 59.479 57.895 10.84 0.00 38.93 5.19
302 303 0.810031 CCGGATGTTACTTCGGGCTG 60.810 60.000 10.84 0.00 38.93 4.85
303 304 1.429148 CGGATGTTACTTCGGGCTGC 61.429 60.000 0.00 0.00 0.00 5.25
304 305 0.392461 GGATGTTACTTCGGGCTGCA 60.392 55.000 0.50 0.00 0.00 4.41
305 306 1.448985 GATGTTACTTCGGGCTGCAA 58.551 50.000 0.50 0.00 0.00 4.08
306 307 1.810151 GATGTTACTTCGGGCTGCAAA 59.190 47.619 0.50 0.00 0.00 3.68
307 308 1.904287 TGTTACTTCGGGCTGCAAAT 58.096 45.000 0.50 0.00 0.00 2.32
308 309 1.810151 TGTTACTTCGGGCTGCAAATC 59.190 47.619 0.50 0.00 0.00 2.17
309 310 1.810151 GTTACTTCGGGCTGCAAATCA 59.190 47.619 0.50 0.00 0.00 2.57
310 311 2.192664 TACTTCGGGCTGCAAATCAA 57.807 45.000 0.50 0.00 0.00 2.57
311 312 1.327303 ACTTCGGGCTGCAAATCAAA 58.673 45.000 0.50 0.00 0.00 2.69
312 313 1.270550 ACTTCGGGCTGCAAATCAAAG 59.729 47.619 0.50 0.00 0.00 2.77
313 314 0.038343 TTCGGGCTGCAAATCAAAGC 60.038 50.000 0.50 0.00 36.17 3.51
314 315 0.895100 TCGGGCTGCAAATCAAAGCT 60.895 50.000 0.50 0.00 37.12 3.74
315 316 0.457337 CGGGCTGCAAATCAAAGCTC 60.457 55.000 0.50 0.00 37.12 4.09
316 317 0.457337 GGGCTGCAAATCAAAGCTCG 60.457 55.000 0.50 0.00 37.12 5.03
317 318 0.523072 GGCTGCAAATCAAAGCTCGA 59.477 50.000 0.50 0.00 37.12 4.04
318 319 1.467035 GGCTGCAAATCAAAGCTCGAG 60.467 52.381 8.45 8.45 37.12 4.04
319 320 1.892468 CTGCAAATCAAAGCTCGAGC 58.108 50.000 30.01 30.01 42.49 5.03
320 321 0.523072 TGCAAATCAAAGCTCGAGCC 59.477 50.000 32.94 15.76 43.38 4.70
321 322 0.179153 GCAAATCAAAGCTCGAGCCC 60.179 55.000 32.94 7.95 43.38 5.19
322 323 1.457346 CAAATCAAAGCTCGAGCCCT 58.543 50.000 32.94 18.52 43.38 5.19
323 324 1.131883 CAAATCAAAGCTCGAGCCCTG 59.868 52.381 32.94 27.71 43.38 4.45
324 325 1.028868 AATCAAAGCTCGAGCCCTGC 61.029 55.000 32.94 9.88 43.38 4.85
325 326 2.883267 ATCAAAGCTCGAGCCCTGCC 62.883 60.000 32.94 5.52 43.38 4.85
326 327 4.416738 AAAGCTCGAGCCCTGCCC 62.417 66.667 32.94 4.72 43.38 5.36
343 344 4.711949 CGAGGTGCAAGCCCAGCT 62.712 66.667 0.00 1.55 45.42 4.24
345 346 4.711949 AGGTGCAAGCCCAGCTCG 62.712 66.667 0.00 0.00 39.15 5.03
377 378 3.917760 TTTTTGGCCGGGTTGCGG 61.918 61.111 2.18 0.00 0.00 5.69
401 402 2.284112 CTGCCCATGCCCAGGTTT 60.284 61.111 3.62 0.00 36.33 3.27
402 403 1.000233 CTGCCCATGCCCAGGTTTA 60.000 57.895 3.62 0.00 36.33 2.01
403 404 1.304879 TGCCCATGCCCAGGTTTAC 60.305 57.895 0.00 0.00 36.33 2.01
411 412 2.588620 TGCCCAGGTTTACGTTCAATT 58.411 42.857 0.00 0.00 0.00 2.32
414 415 3.192633 GCCCAGGTTTACGTTCAATTCAT 59.807 43.478 0.00 0.00 0.00 2.57
422 423 1.876799 ACGTTCAATTCATCGTTGGCA 59.123 42.857 0.00 0.00 32.62 4.92
431 432 4.947147 TCGTTGGCAAGCGGGCTT 62.947 61.111 17.60 0.00 43.83 4.35
432 433 4.404654 CGTTGGCAAGCGGGCTTC 62.405 66.667 0.00 0.00 43.83 3.86
464 465 5.376625 TGTGTAGGAGTTCAAGAGCATTTT 58.623 37.500 0.00 0.00 0.00 1.82
465 466 5.239306 TGTGTAGGAGTTCAAGAGCATTTTG 59.761 40.000 0.00 0.00 0.00 2.44
484 485 8.345565 GCATTTTGGTTCTAGATGTATCGATTT 58.654 33.333 1.71 0.00 0.00 2.17
485 486 9.869844 CATTTTGGTTCTAGATGTATCGATTTC 57.130 33.333 1.71 0.00 0.00 2.17
488 489 8.648557 TTGGTTCTAGATGTATCGATTTCAAG 57.351 34.615 1.71 0.00 0.00 3.02
496 497 7.752695 AGATGTATCGATTTCAAGTTTTGGTC 58.247 34.615 1.71 0.00 0.00 4.02
503 504 7.488322 TCGATTTCAAGTTTTGGTCTGATTTT 58.512 30.769 0.00 0.00 0.00 1.82
518 521 9.983024 TGGTCTGATTTTGTAATTAATTAGGGA 57.017 29.630 8.18 0.00 0.00 4.20
655 658 0.321996 GGAGACTTTTCCTGCCGACT 59.678 55.000 0.00 0.00 34.27 4.18
691 694 2.874664 CGTCCCACCTGACCGGAAA 61.875 63.158 9.46 0.00 36.31 3.13
713 717 2.742053 CCGTCACATCTTTACCCAGTTG 59.258 50.000 0.00 0.00 0.00 3.16
740 744 1.512996 GGGATATCGCCACGTCGAGA 61.513 60.000 8.56 1.07 42.14 4.04
796 815 1.626825 GTCCTACCAAGGCACCACTAA 59.373 52.381 0.00 0.00 43.31 2.24
883 903 2.790791 CCACCACCGGCAAAAGCAA 61.791 57.895 0.00 0.00 0.00 3.91
884 904 1.142748 CACCACCGGCAAAAGCAAA 59.857 52.632 0.00 0.00 0.00 3.68
885 905 0.460987 CACCACCGGCAAAAGCAAAA 60.461 50.000 0.00 0.00 0.00 2.44
886 906 0.461163 ACCACCGGCAAAAGCAAAAC 60.461 50.000 0.00 0.00 0.00 2.43
887 907 1.157257 CCACCGGCAAAAGCAAAACC 61.157 55.000 0.00 0.00 0.00 3.27
888 908 1.227118 ACCGGCAAAAGCAAAACCG 60.227 52.632 0.00 0.00 43.44 4.44
923 943 2.874701 GCGACATAGCACCATTCTGAAT 59.125 45.455 0.00 0.00 37.05 2.57
944 964 1.273327 CAACACATTTCCTCCTTGCCC 59.727 52.381 0.00 0.00 0.00 5.36
947 967 0.251787 ACATTTCCTCCTTGCCCCAC 60.252 55.000 0.00 0.00 0.00 4.61
950 979 2.366153 TTTCCTCCTTGCCCCACACC 62.366 60.000 0.00 0.00 0.00 4.16
953 982 3.574074 CTCCTTGCCCCACACCCAG 62.574 68.421 0.00 0.00 0.00 4.45
978 1007 4.907034 CGATCCGTCGGGCACTCG 62.907 72.222 12.29 11.15 44.00 4.18
984 1013 4.208686 GTCGGGCACTCGGGCTAG 62.209 72.222 0.00 0.00 42.84 3.42
987 1016 4.228567 GGGCACTCGGGCTAGCTC 62.229 72.222 15.72 10.26 42.84 4.09
989 1018 3.151022 GCACTCGGGCTAGCTCCT 61.151 66.667 15.72 0.00 0.00 3.69
990 1019 2.811101 CACTCGGGCTAGCTCCTG 59.189 66.667 15.72 7.32 0.00 3.86
991 1020 2.055042 CACTCGGGCTAGCTCCTGT 61.055 63.158 15.72 8.02 34.12 4.00
992 1021 1.305381 ACTCGGGCTAGCTCCTGTT 60.305 57.895 15.72 0.00 34.12 3.16
1038 1067 3.978193 TTCATGGCGGCCAAGGGT 61.978 61.111 27.70 6.38 36.95 4.34
1138 1167 4.736631 TCTGCGTCGTCGTCTGCG 62.737 66.667 3.66 0.00 39.49 5.18
1209 1238 1.007271 CTCCATAAGCCGCGACGAT 60.007 57.895 8.23 0.00 0.00 3.73
1210 1239 0.240145 CTCCATAAGCCGCGACGATA 59.760 55.000 8.23 0.00 0.00 2.92
1224 1253 1.578023 GACGATAACGACAACGAGCTG 59.422 52.381 0.00 0.00 42.66 4.24
1312 1350 9.541143 TCCTTTTCATTTTGATTTGTAGGTTTC 57.459 29.630 0.00 0.00 0.00 2.78
1313 1351 9.546428 CCTTTTCATTTTGATTTGTAGGTTTCT 57.454 29.630 0.00 0.00 0.00 2.52
1316 1354 9.883142 TTTCATTTTGATTTGTAGGTTTCTTGT 57.117 25.926 0.00 0.00 0.00 3.16
1317 1355 9.883142 TTCATTTTGATTTGTAGGTTTCTTGTT 57.117 25.926 0.00 0.00 0.00 2.83
1318 1356 9.528018 TCATTTTGATTTGTAGGTTTCTTGTTC 57.472 29.630 0.00 0.00 0.00 3.18
1319 1357 9.311916 CATTTTGATTTGTAGGTTTCTTGTTCA 57.688 29.630 0.00 0.00 0.00 3.18
1320 1358 8.696410 TTTTGATTTGTAGGTTTCTTGTTCAC 57.304 30.769 0.00 0.00 0.00 3.18
1321 1359 6.055231 TGATTTGTAGGTTTCTTGTTCACG 57.945 37.500 0.00 0.00 0.00 4.35
1331 1374 2.807631 CTTGTTCACGGGCTGCATGC 62.808 60.000 11.82 11.82 41.94 4.06
1338 1381 2.976903 GGGCTGCATGCTCGATCC 60.977 66.667 20.33 11.76 42.39 3.36
1342 1385 1.647629 CTGCATGCTCGATCCTTGC 59.352 57.895 20.33 13.67 34.89 4.01
1343 1386 1.078285 TGCATGCTCGATCCTTGCA 60.078 52.632 20.33 17.22 39.90 4.08
1344 1387 1.093496 TGCATGCTCGATCCTTGCAG 61.093 55.000 20.33 5.96 40.18 4.41
1345 1388 1.094073 GCATGCTCGATCCTTGCAGT 61.094 55.000 11.37 0.00 40.18 4.40
1346 1389 1.807755 GCATGCTCGATCCTTGCAGTA 60.808 52.381 11.37 0.00 40.18 2.74
1518 1564 7.560626 ACGGTACTAGAGTTATTTCTTCAGGAT 59.439 37.037 0.00 0.00 0.00 3.24
1546 1592 3.438087 CCATGGCAAGAACAGAGTACTTG 59.562 47.826 0.00 0.00 42.33 3.16
1554 1600 7.255139 GGCAAGAACAGAGTACTTGTATTTGTT 60.255 37.037 20.19 14.61 41.73 2.83
1555 1601 8.129211 GCAAGAACAGAGTACTTGTATTTGTTT 58.871 33.333 20.19 6.39 41.73 2.83
1558 1604 9.391006 AGAACAGAGTACTTGTATTTGTTTTGA 57.609 29.630 0.00 0.00 0.00 2.69
1559 1605 9.434559 GAACAGAGTACTTGTATTTGTTTTGAC 57.565 33.333 0.00 0.00 0.00 3.18
1560 1606 8.732746 ACAGAGTACTTGTATTTGTTTTGACT 57.267 30.769 0.00 0.00 0.00 3.41
1568 1614 7.547722 ACTTGTATTTGTTTTGACTTTTGACCC 59.452 33.333 0.00 0.00 0.00 4.46
1603 1649 3.388345 AGAACAGAGGAAACTTCGTCC 57.612 47.619 8.20 0.00 44.43 4.79
1605 1651 2.821991 ACAGAGGAAACTTCGTCCTG 57.178 50.000 8.20 8.46 45.87 3.86
1606 1652 2.040178 ACAGAGGAAACTTCGTCCTGT 58.960 47.619 8.20 8.94 45.87 4.00
1647 1693 2.048877 GTGCCACAATGTGCCAGC 60.049 61.111 8.05 7.00 31.34 4.85
1675 1721 3.963102 CACGTCATCTTCTTATCGACTCG 59.037 47.826 0.00 0.00 0.00 4.18
1694 1740 2.239150 TCGTCCTAGCTACTCTCTGGTT 59.761 50.000 0.00 0.00 0.00 3.67
1695 1741 3.453717 TCGTCCTAGCTACTCTCTGGTTA 59.546 47.826 0.00 0.00 0.00 2.85
1696 1742 4.080695 TCGTCCTAGCTACTCTCTGGTTAA 60.081 45.833 0.00 0.00 0.00 2.01
1697 1743 4.035441 CGTCCTAGCTACTCTCTGGTTAAC 59.965 50.000 0.00 0.00 0.00 2.01
1698 1744 4.338964 GTCCTAGCTACTCTCTGGTTAACC 59.661 50.000 18.27 18.27 0.00 2.85
1736 1782 6.937465 AGTCGAGATCATCATGCTAAGTACTA 59.063 38.462 0.00 0.00 0.00 1.82
1737 1783 7.119116 AGTCGAGATCATCATGCTAAGTACTAG 59.881 40.741 0.00 0.00 0.00 2.57
1738 1784 6.937465 TCGAGATCATCATGCTAAGTACTAGT 59.063 38.462 0.00 0.00 0.00 2.57
1739 1785 8.095169 TCGAGATCATCATGCTAAGTACTAGTA 58.905 37.037 0.00 0.00 0.00 1.82
1740 1786 8.172484 CGAGATCATCATGCTAAGTACTAGTAC 58.828 40.741 23.03 23.03 36.35 2.73
1825 1987 5.869753 AGATCATGCTTGTTGTGTTACTC 57.130 39.130 0.00 0.00 0.00 2.59
1845 2021 8.604890 GTTACTCACAAGTTAGAAATATCTGGC 58.395 37.037 0.00 0.00 35.67 4.85
1849 2025 3.771577 AGTTAGAAATATCTGGCCCCG 57.228 47.619 0.00 0.00 37.10 5.73
1850 2026 2.372172 AGTTAGAAATATCTGGCCCCGG 59.628 50.000 0.00 0.00 37.10 5.73
1851 2027 0.690762 TAGAAATATCTGGCCCCGGC 59.309 55.000 0.00 0.00 37.10 6.13
1897 2079 4.191544 GAGCACCTGATAAGTACATGCAA 58.808 43.478 0.00 0.00 34.03 4.08
1901 2083 5.991606 GCACCTGATAAGTACATGCAATAGA 59.008 40.000 0.00 0.00 0.00 1.98
1948 2130 3.014623 GGTGAAGGCGGCTAAAAGTAAT 58.985 45.455 13.71 0.00 0.00 1.89
1950 2132 4.820173 GGTGAAGGCGGCTAAAAGTAATAT 59.180 41.667 13.71 0.00 0.00 1.28
1959 2141 9.394477 GGCGGCTAAAAGTAATATAATTTTCTG 57.606 33.333 0.00 0.00 37.22 3.02
2099 2290 0.763223 ACGACCAGTCACCCCTTCTT 60.763 55.000 0.00 0.00 0.00 2.52
2100 2291 0.037232 CGACCAGTCACCCCTTCTTC 60.037 60.000 0.00 0.00 0.00 2.87
2101 2292 1.353091 GACCAGTCACCCCTTCTTCT 58.647 55.000 0.00 0.00 0.00 2.85
2117 2308 4.427096 TCTTCTCGACAGTTCTAGCTTG 57.573 45.455 0.00 0.00 0.00 4.01
2176 2369 3.004106 CAGAAACAACCTCTGAAAGCCAG 59.996 47.826 0.00 0.00 42.51 4.85
2202 2395 5.418676 TCAGATAATCAGATTTGTGCGTGA 58.581 37.500 0.00 0.00 0.00 4.35
2203 2396 5.874261 TCAGATAATCAGATTTGTGCGTGAA 59.126 36.000 0.00 0.00 0.00 3.18
2204 2397 6.371271 TCAGATAATCAGATTTGTGCGTGAAA 59.629 34.615 0.00 0.00 0.00 2.69
2205 2398 7.022979 CAGATAATCAGATTTGTGCGTGAAAA 58.977 34.615 0.00 0.00 0.00 2.29
2206 2399 7.007725 CAGATAATCAGATTTGTGCGTGAAAAC 59.992 37.037 0.00 0.00 0.00 2.43
2207 2400 3.347958 TCAGATTTGTGCGTGAAAACC 57.652 42.857 0.00 0.00 0.00 3.27
2208 2401 2.948979 TCAGATTTGTGCGTGAAAACCT 59.051 40.909 0.00 0.00 0.00 3.50
2209 2402 3.044986 CAGATTTGTGCGTGAAAACCTG 58.955 45.455 0.00 0.00 0.00 4.00
2210 2403 2.034558 AGATTTGTGCGTGAAAACCTGG 59.965 45.455 0.00 0.00 0.00 4.45
2211 2404 0.179124 TTTGTGCGTGAAAACCTGGC 60.179 50.000 0.00 0.00 0.00 4.85
2212 2405 2.051345 GTGCGTGAAAACCTGGCG 60.051 61.111 0.00 0.00 0.00 5.69
2213 2406 3.283684 TGCGTGAAAACCTGGCGG 61.284 61.111 0.00 0.00 0.00 6.13
2214 2407 2.975799 GCGTGAAAACCTGGCGGA 60.976 61.111 0.00 0.00 0.00 5.54
2215 2408 2.548295 GCGTGAAAACCTGGCGGAA 61.548 57.895 0.00 0.00 0.00 4.30
2216 2409 1.862602 GCGTGAAAACCTGGCGGAAT 61.863 55.000 0.00 0.00 0.00 3.01
2217 2410 0.168128 CGTGAAAACCTGGCGGAATC 59.832 55.000 0.00 0.00 0.00 2.52
2218 2411 0.168128 GTGAAAACCTGGCGGAATCG 59.832 55.000 0.00 0.00 39.81 3.34
2219 2412 0.250553 TGAAAACCTGGCGGAATCGT 60.251 50.000 0.00 0.00 38.89 3.73
2220 2413 1.002201 TGAAAACCTGGCGGAATCGTA 59.998 47.619 0.00 0.00 38.89 3.43
2221 2414 2.285977 GAAAACCTGGCGGAATCGTAT 58.714 47.619 0.00 0.00 38.89 3.06
2222 2415 3.118702 TGAAAACCTGGCGGAATCGTATA 60.119 43.478 0.00 0.00 38.89 1.47
2223 2416 2.521105 AACCTGGCGGAATCGTATAC 57.479 50.000 0.00 0.00 38.89 1.47
2224 2417 1.405872 ACCTGGCGGAATCGTATACA 58.594 50.000 3.32 0.00 38.89 2.29
2225 2418 1.968493 ACCTGGCGGAATCGTATACAT 59.032 47.619 3.32 0.00 38.89 2.29
2226 2419 2.029290 ACCTGGCGGAATCGTATACATC 60.029 50.000 3.32 0.00 38.89 3.06
2227 2420 2.029380 CCTGGCGGAATCGTATACATCA 60.029 50.000 3.32 0.00 38.89 3.07
2228 2421 3.368427 CCTGGCGGAATCGTATACATCAT 60.368 47.826 3.32 0.00 38.89 2.45
2229 2422 4.245660 CTGGCGGAATCGTATACATCATT 58.754 43.478 3.32 0.00 38.89 2.57
2230 2423 4.637276 TGGCGGAATCGTATACATCATTT 58.363 39.130 3.32 0.00 38.89 2.32
2231 2424 4.450757 TGGCGGAATCGTATACATCATTTG 59.549 41.667 3.32 0.00 38.89 2.32
2232 2425 4.688879 GGCGGAATCGTATACATCATTTGA 59.311 41.667 3.32 0.00 38.89 2.69
2233 2426 5.389516 GGCGGAATCGTATACATCATTTGAC 60.390 44.000 3.32 0.00 38.89 3.18
2234 2427 5.665459 GCGGAATCGTATACATCATTTGACG 60.665 44.000 3.32 5.87 38.89 4.35
2235 2428 5.164090 CGGAATCGTATACATCATTTGACGG 60.164 44.000 3.32 0.00 0.00 4.79
2236 2429 5.924254 GGAATCGTATACATCATTTGACGGA 59.076 40.000 3.32 0.00 0.00 4.69
2237 2430 6.590292 GGAATCGTATACATCATTTGACGGAT 59.410 38.462 3.32 0.00 0.00 4.18
2238 2431 6.951256 ATCGTATACATCATTTGACGGATG 57.049 37.500 3.32 0.00 44.97 3.51
2239 2432 4.684242 TCGTATACATCATTTGACGGATGC 59.316 41.667 3.32 0.00 43.64 3.91
2240 2433 4.686091 CGTATACATCATTTGACGGATGCT 59.314 41.667 3.32 0.00 43.64 3.79
2241 2434 5.164051 CGTATACATCATTTGACGGATGCTC 60.164 44.000 3.32 0.00 43.64 4.26
2242 2435 2.989909 ACATCATTTGACGGATGCTCA 58.010 42.857 0.00 0.00 43.64 4.26
2243 2436 2.941064 ACATCATTTGACGGATGCTCAG 59.059 45.455 0.00 0.00 43.64 3.35
2244 2437 3.200483 CATCATTTGACGGATGCTCAGA 58.800 45.455 0.00 0.00 35.03 3.27
2245 2438 3.333029 TCATTTGACGGATGCTCAGAA 57.667 42.857 0.00 0.00 0.00 3.02
2246 2439 3.264947 TCATTTGACGGATGCTCAGAAG 58.735 45.455 0.00 0.00 0.00 2.85
2247 2440 2.839486 TTTGACGGATGCTCAGAAGT 57.161 45.000 0.00 0.00 0.00 3.01
2248 2441 3.953712 TTTGACGGATGCTCAGAAGTA 57.046 42.857 0.00 0.00 0.00 2.24
2249 2442 3.510388 TTGACGGATGCTCAGAAGTAG 57.490 47.619 0.00 0.00 0.00 2.57
2250 2443 2.447443 TGACGGATGCTCAGAAGTAGT 58.553 47.619 0.00 0.00 0.00 2.73
2251 2444 3.617284 TGACGGATGCTCAGAAGTAGTA 58.383 45.455 0.00 0.00 0.00 1.82
2252 2445 3.377485 TGACGGATGCTCAGAAGTAGTAC 59.623 47.826 0.00 0.00 0.00 2.73
2253 2446 3.622630 ACGGATGCTCAGAAGTAGTACT 58.377 45.455 0.00 0.00 0.00 2.73
2254 2447 4.778579 ACGGATGCTCAGAAGTAGTACTA 58.221 43.478 2.50 0.00 0.00 1.82
2255 2448 5.191426 ACGGATGCTCAGAAGTAGTACTAA 58.809 41.667 3.61 0.00 0.00 2.24
2256 2449 5.066246 ACGGATGCTCAGAAGTAGTACTAAC 59.934 44.000 3.61 1.47 0.00 2.34
2257 2450 5.505985 CGGATGCTCAGAAGTAGTACTAACC 60.506 48.000 3.61 0.00 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 4.129737 ACATCTCGCCGACGGTGG 62.130 66.667 26.23 16.90 40.63 4.61
5 6 2.880879 CACATCTCGCCGACGGTG 60.881 66.667 21.48 21.48 40.63 4.94
6 7 4.129737 CCACATCTCGCCGACGGT 62.130 66.667 16.73 0.00 40.63 4.83
7 8 4.129737 ACCACATCTCGCCGACGG 62.130 66.667 10.29 10.29 40.63 4.79
8 9 2.579787 GACCACATCTCGCCGACG 60.580 66.667 0.00 0.00 42.01 5.12
9 10 1.517257 CTGACCACATCTCGCCGAC 60.517 63.158 0.00 0.00 0.00 4.79
10 11 2.710902 CCTGACCACATCTCGCCGA 61.711 63.158 0.00 0.00 0.00 5.54
11 12 2.202797 CCTGACCACATCTCGCCG 60.203 66.667 0.00 0.00 0.00 6.46
12 13 1.153549 GTCCTGACCACATCTCGCC 60.154 63.158 0.00 0.00 0.00 5.54
13 14 0.179124 GAGTCCTGACCACATCTCGC 60.179 60.000 0.00 0.00 0.00 5.03
14 15 1.177401 TGAGTCCTGACCACATCTCG 58.823 55.000 0.00 0.00 0.00 4.04
15 16 2.828520 TCTTGAGTCCTGACCACATCTC 59.171 50.000 0.00 0.00 0.00 2.75
16 17 2.564947 GTCTTGAGTCCTGACCACATCT 59.435 50.000 0.00 0.00 0.00 2.90
17 18 2.564947 AGTCTTGAGTCCTGACCACATC 59.435 50.000 8.44 0.00 0.00 3.06
18 19 2.301296 CAGTCTTGAGTCCTGACCACAT 59.699 50.000 8.44 0.00 0.00 3.21
19 20 1.688735 CAGTCTTGAGTCCTGACCACA 59.311 52.381 8.44 0.00 0.00 4.17
20 21 1.964223 TCAGTCTTGAGTCCTGACCAC 59.036 52.381 8.44 0.00 30.58 4.16
21 22 2.242926 CTCAGTCTTGAGTCCTGACCA 58.757 52.381 8.44 0.00 44.74 4.02
31 32 4.923415 TGTATCCTCACTCTCAGTCTTGA 58.077 43.478 0.00 0.00 0.00 3.02
32 33 4.704540 ACTGTATCCTCACTCTCAGTCTTG 59.295 45.833 0.00 0.00 31.81 3.02
33 34 4.704540 CACTGTATCCTCACTCTCAGTCTT 59.295 45.833 0.00 0.00 34.57 3.01
34 35 4.269183 CACTGTATCCTCACTCTCAGTCT 58.731 47.826 0.00 0.00 34.57 3.24
35 36 3.380004 CCACTGTATCCTCACTCTCAGTC 59.620 52.174 0.00 0.00 34.57 3.51
36 37 3.010696 TCCACTGTATCCTCACTCTCAGT 59.989 47.826 0.00 0.00 36.73 3.41
37 38 3.625853 TCCACTGTATCCTCACTCTCAG 58.374 50.000 0.00 0.00 0.00 3.35
38 39 3.267031 TCTCCACTGTATCCTCACTCTCA 59.733 47.826 0.00 0.00 0.00 3.27
39 40 3.630312 GTCTCCACTGTATCCTCACTCTC 59.370 52.174 0.00 0.00 0.00 3.20
40 41 3.626930 GTCTCCACTGTATCCTCACTCT 58.373 50.000 0.00 0.00 0.00 3.24
41 42 2.356382 CGTCTCCACTGTATCCTCACTC 59.644 54.545 0.00 0.00 0.00 3.51
42 43 2.291024 ACGTCTCCACTGTATCCTCACT 60.291 50.000 0.00 0.00 0.00 3.41
43 44 2.093106 ACGTCTCCACTGTATCCTCAC 58.907 52.381 0.00 0.00 0.00 3.51
44 45 2.092323 CACGTCTCCACTGTATCCTCA 58.908 52.381 0.00 0.00 0.00 3.86
45 46 1.405821 CCACGTCTCCACTGTATCCTC 59.594 57.143 0.00 0.00 0.00 3.71
46 47 1.475403 CCACGTCTCCACTGTATCCT 58.525 55.000 0.00 0.00 0.00 3.24
47 48 0.460311 CCCACGTCTCCACTGTATCC 59.540 60.000 0.00 0.00 0.00 2.59
48 49 0.460311 CCCCACGTCTCCACTGTATC 59.540 60.000 0.00 0.00 0.00 2.24
49 50 0.976073 CCCCCACGTCTCCACTGTAT 60.976 60.000 0.00 0.00 0.00 2.29
50 51 1.608336 CCCCCACGTCTCCACTGTA 60.608 63.158 0.00 0.00 0.00 2.74
51 52 2.923035 CCCCCACGTCTCCACTGT 60.923 66.667 0.00 0.00 0.00 3.55
52 53 1.764571 TTTCCCCCACGTCTCCACTG 61.765 60.000 0.00 0.00 0.00 3.66
53 54 1.460689 TTTCCCCCACGTCTCCACT 60.461 57.895 0.00 0.00 0.00 4.00
54 55 1.003718 CTTTCCCCCACGTCTCCAC 60.004 63.158 0.00 0.00 0.00 4.02
55 56 2.221299 CCTTTCCCCCACGTCTCCA 61.221 63.158 0.00 0.00 0.00 3.86
56 57 2.669240 CCTTTCCCCCACGTCTCC 59.331 66.667 0.00 0.00 0.00 3.71
57 58 2.669240 CCCTTTCCCCCACGTCTC 59.331 66.667 0.00 0.00 0.00 3.36
58 59 3.647771 GCCCTTTCCCCCACGTCT 61.648 66.667 0.00 0.00 0.00 4.18
62 63 4.280019 ACACGCCCTTTCCCCCAC 62.280 66.667 0.00 0.00 0.00 4.61
63 64 4.278513 CACACGCCCTTTCCCCCA 62.279 66.667 0.00 0.00 0.00 4.96
64 65 3.961414 TCACACGCCCTTTCCCCC 61.961 66.667 0.00 0.00 0.00 5.40
65 66 2.671963 GTCACACGCCCTTTCCCC 60.672 66.667 0.00 0.00 0.00 4.81
66 67 3.047877 CGTCACACGCCCTTTCCC 61.048 66.667 0.00 0.00 33.65 3.97
67 68 3.047877 CCGTCACACGCCCTTTCC 61.048 66.667 0.00 0.00 40.91 3.13
68 69 2.775032 TAGCCGTCACACGCCCTTTC 62.775 60.000 0.00 0.00 40.91 2.62
69 70 2.781595 CTAGCCGTCACACGCCCTTT 62.782 60.000 0.00 0.00 40.91 3.11
70 71 3.296709 CTAGCCGTCACACGCCCTT 62.297 63.158 0.00 0.00 40.91 3.95
71 72 3.760035 CTAGCCGTCACACGCCCT 61.760 66.667 0.00 0.00 40.91 5.19
72 73 4.814294 CCTAGCCGTCACACGCCC 62.814 72.222 0.00 0.00 40.91 6.13
73 74 4.814294 CCCTAGCCGTCACACGCC 62.814 72.222 0.00 0.00 40.91 5.68
74 75 2.216750 TAACCCTAGCCGTCACACGC 62.217 60.000 0.00 0.00 40.91 5.34
75 76 0.179145 CTAACCCTAGCCGTCACACG 60.179 60.000 0.00 0.00 42.11 4.49
76 77 0.459759 GCTAACCCTAGCCGTCACAC 60.460 60.000 0.00 0.00 44.22 3.82
77 78 1.895238 GCTAACCCTAGCCGTCACA 59.105 57.895 0.00 0.00 44.22 3.58
78 79 4.829588 GCTAACCCTAGCCGTCAC 57.170 61.111 0.00 0.00 44.22 3.67
85 86 5.148502 TCTCCCTCAATTAGCTAACCCTAG 58.851 45.833 8.70 4.36 0.00 3.02
86 87 5.148502 CTCTCCCTCAATTAGCTAACCCTA 58.851 45.833 8.70 0.00 0.00 3.53
87 88 3.970640 CTCTCCCTCAATTAGCTAACCCT 59.029 47.826 8.70 0.00 0.00 4.34
88 89 3.071747 CCTCTCCCTCAATTAGCTAACCC 59.928 52.174 8.70 0.00 0.00 4.11
89 90 3.495276 GCCTCTCCCTCAATTAGCTAACC 60.495 52.174 8.70 0.00 0.00 2.85
90 91 3.134804 TGCCTCTCCCTCAATTAGCTAAC 59.865 47.826 8.70 0.00 0.00 2.34
91 92 3.384168 TGCCTCTCCCTCAATTAGCTAA 58.616 45.455 8.99 8.99 0.00 3.09
92 93 3.046283 TGCCTCTCCCTCAATTAGCTA 57.954 47.619 0.00 0.00 0.00 3.32
93 94 1.885049 TGCCTCTCCCTCAATTAGCT 58.115 50.000 0.00 0.00 0.00 3.32
94 95 2.947127 ATGCCTCTCCCTCAATTAGC 57.053 50.000 0.00 0.00 0.00 3.09
95 96 4.841422 CCATATGCCTCTCCCTCAATTAG 58.159 47.826 0.00 0.00 0.00 1.73
96 97 3.009473 GCCATATGCCTCTCCCTCAATTA 59.991 47.826 0.00 0.00 0.00 1.40
97 98 2.224967 GCCATATGCCTCTCCCTCAATT 60.225 50.000 0.00 0.00 0.00 2.32
98 99 1.353694 GCCATATGCCTCTCCCTCAAT 59.646 52.381 0.00 0.00 0.00 2.57
99 100 0.767375 GCCATATGCCTCTCCCTCAA 59.233 55.000 0.00 0.00 0.00 3.02
100 101 1.475169 CGCCATATGCCTCTCCCTCA 61.475 60.000 0.00 0.00 36.24 3.86
101 102 1.294780 CGCCATATGCCTCTCCCTC 59.705 63.158 0.00 0.00 36.24 4.30
102 103 2.888447 GCGCCATATGCCTCTCCCT 61.888 63.158 0.00 0.00 36.24 4.20
103 104 2.359230 GCGCCATATGCCTCTCCC 60.359 66.667 0.00 0.00 36.24 4.30
104 105 1.670406 CAGCGCCATATGCCTCTCC 60.670 63.158 2.29 0.00 36.24 3.71
105 106 1.670406 CCAGCGCCATATGCCTCTC 60.670 63.158 2.29 0.00 36.24 3.20
106 107 2.429058 CCAGCGCCATATGCCTCT 59.571 61.111 2.29 0.00 36.24 3.69
107 108 2.111878 ACCAGCGCCATATGCCTC 59.888 61.111 2.29 0.00 36.24 4.70
108 109 2.203252 CACCAGCGCCATATGCCT 60.203 61.111 2.29 0.00 36.24 4.75
109 110 2.516930 ACACCAGCGCCATATGCC 60.517 61.111 2.29 0.00 36.24 4.40
110 111 2.717485 CACACCAGCGCCATATGC 59.283 61.111 2.29 0.00 0.00 3.14
111 112 1.439353 GACCACACCAGCGCCATATG 61.439 60.000 2.29 0.00 0.00 1.78
112 113 1.153168 GACCACACCAGCGCCATAT 60.153 57.895 2.29 0.00 0.00 1.78
113 114 2.267642 GACCACACCAGCGCCATA 59.732 61.111 2.29 0.00 0.00 2.74
116 117 4.760047 ATCGACCACACCAGCGCC 62.760 66.667 2.29 0.00 0.00 6.53
117 118 2.325082 AAATCGACCACACCAGCGC 61.325 57.895 0.00 0.00 0.00 5.92
118 119 1.227999 ACAAATCGACCACACCAGCG 61.228 55.000 0.00 0.00 0.00 5.18
119 120 0.951558 AACAAATCGACCACACCAGC 59.048 50.000 0.00 0.00 0.00 4.85
120 121 1.266718 CCAACAAATCGACCACACCAG 59.733 52.381 0.00 0.00 0.00 4.00
121 122 1.313772 CCAACAAATCGACCACACCA 58.686 50.000 0.00 0.00 0.00 4.17
122 123 0.596082 CCCAACAAATCGACCACACC 59.404 55.000 0.00 0.00 0.00 4.16
123 124 1.314730 ACCCAACAAATCGACCACAC 58.685 50.000 0.00 0.00 0.00 3.82
124 125 1.678627 CAACCCAACAAATCGACCACA 59.321 47.619 0.00 0.00 0.00 4.17
125 126 1.000717 CCAACCCAACAAATCGACCAC 60.001 52.381 0.00 0.00 0.00 4.16
126 127 1.323412 CCAACCCAACAAATCGACCA 58.677 50.000 0.00 0.00 0.00 4.02
127 128 0.601057 CCCAACCCAACAAATCGACC 59.399 55.000 0.00 0.00 0.00 4.79
128 129 0.038618 GCCCAACCCAACAAATCGAC 60.039 55.000 0.00 0.00 0.00 4.20
129 130 1.182385 GGCCCAACCCAACAAATCGA 61.182 55.000 0.00 0.00 0.00 3.59
130 131 1.184970 AGGCCCAACCCAACAAATCG 61.185 55.000 0.00 0.00 40.58 3.34
131 132 1.001974 GAAGGCCCAACCCAACAAATC 59.998 52.381 0.00 0.00 40.58 2.17
132 133 1.055849 GAAGGCCCAACCCAACAAAT 58.944 50.000 0.00 0.00 40.58 2.32
133 134 0.325671 TGAAGGCCCAACCCAACAAA 60.326 50.000 0.00 0.00 40.58 2.83
134 135 1.045911 GTGAAGGCCCAACCCAACAA 61.046 55.000 0.00 0.00 40.58 2.83
135 136 1.456705 GTGAAGGCCCAACCCAACA 60.457 57.895 0.00 0.00 40.58 3.33
136 137 0.831711 ATGTGAAGGCCCAACCCAAC 60.832 55.000 0.00 0.00 40.58 3.77
137 138 0.105246 AATGTGAAGGCCCAACCCAA 60.105 50.000 0.00 0.00 40.58 4.12
138 139 0.541764 GAATGTGAAGGCCCAACCCA 60.542 55.000 0.00 0.00 40.58 4.51
139 140 1.257750 GGAATGTGAAGGCCCAACCC 61.258 60.000 0.00 0.00 40.58 4.11
140 141 0.541764 TGGAATGTGAAGGCCCAACC 60.542 55.000 0.00 0.00 39.61 3.77
141 142 0.890683 CTGGAATGTGAAGGCCCAAC 59.109 55.000 0.00 0.00 0.00 3.77
142 143 0.776810 TCTGGAATGTGAAGGCCCAA 59.223 50.000 0.00 0.00 0.00 4.12
143 144 1.002069 ATCTGGAATGTGAAGGCCCA 58.998 50.000 0.00 0.00 0.00 5.36
144 145 1.064463 TGATCTGGAATGTGAAGGCCC 60.064 52.381 0.00 0.00 0.00 5.80
145 146 2.425143 TGATCTGGAATGTGAAGGCC 57.575 50.000 0.00 0.00 0.00 5.19
146 147 2.686915 CCTTGATCTGGAATGTGAAGGC 59.313 50.000 0.00 0.00 0.00 4.35
147 148 4.226427 TCCTTGATCTGGAATGTGAAGG 57.774 45.455 5.71 0.00 0.00 3.46
155 156 3.960755 TCGCTAGATTCCTTGATCTGGAA 59.039 43.478 18.35 18.35 46.16 3.53
156 157 3.319405 GTCGCTAGATTCCTTGATCTGGA 59.681 47.826 0.00 4.29 36.93 3.86
157 158 3.648009 GTCGCTAGATTCCTTGATCTGG 58.352 50.000 0.00 0.00 37.01 3.86
158 159 3.304257 CGTCGCTAGATTCCTTGATCTG 58.696 50.000 0.00 0.00 37.01 2.90
159 160 2.294791 CCGTCGCTAGATTCCTTGATCT 59.705 50.000 0.00 0.00 39.59 2.75
160 161 2.667137 CCGTCGCTAGATTCCTTGATC 58.333 52.381 0.00 0.00 0.00 2.92
161 162 1.269831 GCCGTCGCTAGATTCCTTGAT 60.270 52.381 0.00 0.00 0.00 2.57
162 163 0.102481 GCCGTCGCTAGATTCCTTGA 59.898 55.000 0.00 0.00 0.00 3.02
163 164 0.876342 GGCCGTCGCTAGATTCCTTG 60.876 60.000 0.00 0.00 34.44 3.61
164 165 1.442148 GGCCGTCGCTAGATTCCTT 59.558 57.895 0.00 0.00 34.44 3.36
165 166 2.499827 GGGCCGTCGCTAGATTCCT 61.500 63.158 0.00 0.00 34.44 3.36
166 167 2.029221 GGGCCGTCGCTAGATTCC 59.971 66.667 0.00 0.00 34.44 3.01
167 168 0.601558 TATGGGCCGTCGCTAGATTC 59.398 55.000 0.00 0.00 34.44 2.52
168 169 0.317479 GTATGGGCCGTCGCTAGATT 59.683 55.000 0.00 0.00 34.44 2.40
169 170 1.863662 CGTATGGGCCGTCGCTAGAT 61.864 60.000 0.00 0.00 34.44 1.98
170 171 2.549198 CGTATGGGCCGTCGCTAGA 61.549 63.158 0.00 0.00 34.44 2.43
171 172 2.050351 CGTATGGGCCGTCGCTAG 60.050 66.667 0.00 0.00 34.44 3.42
172 173 4.274700 GCGTATGGGCCGTCGCTA 62.275 66.667 25.23 0.00 44.28 4.26
175 176 4.805231 TGTGCGTATGGGCCGTCG 62.805 66.667 0.00 7.39 0.00 5.12
176 177 2.845752 TTCTGTGCGTATGGGCCGTC 62.846 60.000 0.00 0.00 0.00 4.79
177 178 2.949909 TTCTGTGCGTATGGGCCGT 61.950 57.895 2.58 2.58 0.00 5.68
178 179 2.125310 TTCTGTGCGTATGGGCCG 60.125 61.111 0.00 0.00 0.00 6.13
179 180 0.958382 TTGTTCTGTGCGTATGGGCC 60.958 55.000 0.00 0.00 0.00 5.80
180 181 1.064060 GATTGTTCTGTGCGTATGGGC 59.936 52.381 0.00 0.00 0.00 5.36
181 182 2.355197 TGATTGTTCTGTGCGTATGGG 58.645 47.619 0.00 0.00 0.00 4.00
182 183 3.426159 GGTTGATTGTTCTGTGCGTATGG 60.426 47.826 0.00 0.00 0.00 2.74
183 184 3.188254 TGGTTGATTGTTCTGTGCGTATG 59.812 43.478 0.00 0.00 0.00 2.39
184 185 3.188460 GTGGTTGATTGTTCTGTGCGTAT 59.812 43.478 0.00 0.00 0.00 3.06
185 186 2.546368 GTGGTTGATTGTTCTGTGCGTA 59.454 45.455 0.00 0.00 0.00 4.42
186 187 1.333619 GTGGTTGATTGTTCTGTGCGT 59.666 47.619 0.00 0.00 0.00 5.24
187 188 1.603802 AGTGGTTGATTGTTCTGTGCG 59.396 47.619 0.00 0.00 0.00 5.34
188 189 2.358898 ACAGTGGTTGATTGTTCTGTGC 59.641 45.455 0.00 0.00 35.32 4.57
189 190 4.574421 TGTACAGTGGTTGATTGTTCTGTG 59.426 41.667 0.00 0.00 36.89 3.66
190 191 4.776349 TGTACAGTGGTTGATTGTTCTGT 58.224 39.130 0.00 0.00 39.11 3.41
191 192 4.214119 CCTGTACAGTGGTTGATTGTTCTG 59.786 45.833 21.18 0.00 0.00 3.02
192 193 4.141482 ACCTGTACAGTGGTTGATTGTTCT 60.141 41.667 21.18 0.00 31.62 3.01
193 194 4.134563 ACCTGTACAGTGGTTGATTGTTC 58.865 43.478 21.18 0.00 31.62 3.18
194 195 4.164843 ACCTGTACAGTGGTTGATTGTT 57.835 40.909 21.18 0.00 31.62 2.83
195 196 3.857157 ACCTGTACAGTGGTTGATTGT 57.143 42.857 21.18 6.01 31.62 2.71
196 197 5.514274 AAAACCTGTACAGTGGTTGATTG 57.486 39.130 21.18 5.39 44.83 2.67
197 198 6.485648 GTCTAAAACCTGTACAGTGGTTGATT 59.514 38.462 21.18 13.59 44.83 2.57
198 199 5.995897 GTCTAAAACCTGTACAGTGGTTGAT 59.004 40.000 21.18 14.06 44.83 2.57
199 200 5.104859 TGTCTAAAACCTGTACAGTGGTTGA 60.105 40.000 21.18 10.77 44.83 3.18
200 201 5.120399 TGTCTAAAACCTGTACAGTGGTTG 58.880 41.667 21.18 8.20 44.83 3.77
202 203 5.562298 ATGTCTAAAACCTGTACAGTGGT 57.438 39.130 21.18 11.39 38.35 4.16
203 204 6.877611 AAATGTCTAAAACCTGTACAGTGG 57.122 37.500 21.18 10.71 0.00 4.00
204 205 7.069569 CGAAAATGTCTAAAACCTGTACAGTG 58.930 38.462 21.18 14.60 0.00 3.66
205 206 6.204108 CCGAAAATGTCTAAAACCTGTACAGT 59.796 38.462 21.18 7.09 0.00 3.55
206 207 6.348213 CCCGAAAATGTCTAAAACCTGTACAG 60.348 42.308 16.34 16.34 0.00 2.74
207 208 5.470777 CCCGAAAATGTCTAAAACCTGTACA 59.529 40.000 0.00 0.00 0.00 2.90
208 209 5.618418 GCCCGAAAATGTCTAAAACCTGTAC 60.618 44.000 0.00 0.00 0.00 2.90
209 210 4.456566 GCCCGAAAATGTCTAAAACCTGTA 59.543 41.667 0.00 0.00 0.00 2.74
210 211 3.254903 GCCCGAAAATGTCTAAAACCTGT 59.745 43.478 0.00 0.00 0.00 4.00
211 212 3.366985 GGCCCGAAAATGTCTAAAACCTG 60.367 47.826 0.00 0.00 0.00 4.00
212 213 2.823747 GGCCCGAAAATGTCTAAAACCT 59.176 45.455 0.00 0.00 0.00 3.50
213 214 2.414957 CGGCCCGAAAATGTCTAAAACC 60.415 50.000 0.00 0.00 0.00 3.27
214 215 2.485038 TCGGCCCGAAAATGTCTAAAAC 59.515 45.455 1.70 0.00 31.06 2.43
215 216 2.745281 CTCGGCCCGAAAATGTCTAAAA 59.255 45.455 7.50 0.00 34.74 1.52
216 217 2.352388 CTCGGCCCGAAAATGTCTAAA 58.648 47.619 7.50 0.00 34.74 1.85
217 218 2.010043 GCTCGGCCCGAAAATGTCTAA 61.010 52.381 7.50 0.00 34.74 2.10
218 219 0.461339 GCTCGGCCCGAAAATGTCTA 60.461 55.000 7.50 0.00 34.74 2.59
219 220 1.745489 GCTCGGCCCGAAAATGTCT 60.745 57.895 7.50 0.00 34.74 3.41
220 221 2.761195 GGCTCGGCCCGAAAATGTC 61.761 63.158 7.50 0.00 44.06 3.06
221 222 2.750237 GGCTCGGCCCGAAAATGT 60.750 61.111 7.50 0.00 44.06 2.71
234 235 2.942648 AAATTAGCTCGGCCCGGCTC 62.943 60.000 19.99 2.55 39.65 4.70
235 236 2.942648 GAAATTAGCTCGGCCCGGCT 62.943 60.000 20.20 20.20 41.92 5.52
236 237 2.516225 AAATTAGCTCGGCCCGGC 60.516 61.111 1.90 5.82 0.00 6.13
237 238 2.244651 CGAAATTAGCTCGGCCCGG 61.245 63.158 1.90 0.00 32.62 5.73
238 239 3.319904 CGAAATTAGCTCGGCCCG 58.680 61.111 0.00 0.00 32.62 6.13
243 244 4.413495 TTTTCAACCCGAAATTAGCTCG 57.587 40.909 0.00 0.00 43.12 5.03
244 245 8.751302 TTTAATTTTCAACCCGAAATTAGCTC 57.249 30.769 0.00 0.00 43.12 4.09
245 246 7.330946 GCTTTAATTTTCAACCCGAAATTAGCT 59.669 33.333 0.00 0.00 43.12 3.32
246 247 7.412563 GGCTTTAATTTTCAACCCGAAATTAGC 60.413 37.037 0.00 0.00 43.12 3.09
247 248 7.064134 GGGCTTTAATTTTCAACCCGAAATTAG 59.936 37.037 0.00 0.00 43.12 1.73
248 249 6.874664 GGGCTTTAATTTTCAACCCGAAATTA 59.125 34.615 0.00 0.00 43.12 1.40
249 250 5.703592 GGGCTTTAATTTTCAACCCGAAATT 59.296 36.000 0.00 0.00 43.12 1.82
250 251 5.242434 GGGCTTTAATTTTCAACCCGAAAT 58.758 37.500 0.00 0.00 43.12 2.17
251 252 4.633175 GGGCTTTAATTTTCAACCCGAAA 58.367 39.130 0.00 0.00 41.95 3.46
252 253 4.260139 GGGCTTTAATTTTCAACCCGAA 57.740 40.909 0.00 0.00 0.00 4.30
253 254 3.945981 GGGCTTTAATTTTCAACCCGA 57.054 42.857 0.00 0.00 0.00 5.14
255 256 3.845178 CTCGGGCTTTAATTTTCAACCC 58.155 45.455 0.00 0.00 0.00 4.11
256 257 3.250744 GCTCGGGCTTTAATTTTCAACC 58.749 45.455 0.00 0.00 35.22 3.77
257 258 3.056821 AGGCTCGGGCTTTAATTTTCAAC 60.057 43.478 7.48 0.00 33.67 3.18
258 259 3.056891 CAGGCTCGGGCTTTAATTTTCAA 60.057 43.478 7.48 0.00 35.88 2.69
259 260 2.491693 CAGGCTCGGGCTTTAATTTTCA 59.508 45.455 7.48 0.00 35.88 2.69
260 261 2.159240 CCAGGCTCGGGCTTTAATTTTC 60.159 50.000 7.48 0.00 35.88 2.29
261 262 1.824852 CCAGGCTCGGGCTTTAATTTT 59.175 47.619 7.48 0.00 35.88 1.82
262 263 1.474330 CCAGGCTCGGGCTTTAATTT 58.526 50.000 7.48 0.00 35.88 1.82
263 264 3.191182 CCAGGCTCGGGCTTTAATT 57.809 52.632 7.48 0.00 35.88 1.40
264 265 4.986467 CCAGGCTCGGGCTTTAAT 57.014 55.556 7.48 0.00 35.88 1.40
274 275 2.742116 TAACATCCGGGCCAGGCTC 61.742 63.158 18.43 6.22 0.00 4.70
275 276 2.690881 TAACATCCGGGCCAGGCT 60.691 61.111 18.43 4.29 0.00 4.58
276 277 2.516225 GTAACATCCGGGCCAGGC 60.516 66.667 18.43 1.26 0.00 4.85
277 278 0.463833 GAAGTAACATCCGGGCCAGG 60.464 60.000 17.03 17.03 0.00 4.45
278 279 0.810031 CGAAGTAACATCCGGGCCAG 60.810 60.000 4.39 0.00 0.00 4.85
279 280 1.219664 CGAAGTAACATCCGGGCCA 59.780 57.895 4.39 0.00 0.00 5.36
280 281 1.523032 CCGAAGTAACATCCGGGCC 60.523 63.158 0.00 0.00 38.42 5.80
281 282 4.120085 CCGAAGTAACATCCGGGC 57.880 61.111 0.00 0.00 38.42 6.13
283 284 0.810031 CAGCCCGAAGTAACATCCGG 60.810 60.000 0.00 0.00 41.47 5.14
284 285 1.429148 GCAGCCCGAAGTAACATCCG 61.429 60.000 0.00 0.00 0.00 4.18
285 286 0.392461 TGCAGCCCGAAGTAACATCC 60.392 55.000 0.00 0.00 0.00 3.51
286 287 1.448985 TTGCAGCCCGAAGTAACATC 58.551 50.000 0.00 0.00 0.00 3.06
287 288 1.904287 TTTGCAGCCCGAAGTAACAT 58.096 45.000 0.00 0.00 0.00 2.71
288 289 1.810151 GATTTGCAGCCCGAAGTAACA 59.190 47.619 0.00 0.00 0.00 2.41
289 290 1.810151 TGATTTGCAGCCCGAAGTAAC 59.190 47.619 0.00 0.00 0.00 2.50
290 291 2.192664 TGATTTGCAGCCCGAAGTAA 57.807 45.000 0.00 0.00 0.00 2.24
291 292 2.192664 TTGATTTGCAGCCCGAAGTA 57.807 45.000 0.00 0.00 0.00 2.24
292 293 1.270550 CTTTGATTTGCAGCCCGAAGT 59.729 47.619 0.00 0.00 0.00 3.01
293 294 1.986698 CTTTGATTTGCAGCCCGAAG 58.013 50.000 0.00 0.00 0.00 3.79
294 295 0.038343 GCTTTGATTTGCAGCCCGAA 60.038 50.000 0.00 0.00 0.00 4.30
295 296 0.895100 AGCTTTGATTTGCAGCCCGA 60.895 50.000 0.00 0.00 33.73 5.14
296 297 0.457337 GAGCTTTGATTTGCAGCCCG 60.457 55.000 0.00 0.00 33.73 6.13
297 298 0.457337 CGAGCTTTGATTTGCAGCCC 60.457 55.000 0.00 0.00 33.73 5.19
298 299 0.523072 TCGAGCTTTGATTTGCAGCC 59.477 50.000 0.00 0.00 33.73 4.85
299 300 1.892468 CTCGAGCTTTGATTTGCAGC 58.108 50.000 0.00 0.00 0.00 5.25
300 301 1.467035 GGCTCGAGCTTTGATTTGCAG 60.467 52.381 34.46 0.00 41.70 4.41
301 302 0.523072 GGCTCGAGCTTTGATTTGCA 59.477 50.000 34.46 0.00 41.70 4.08
302 303 0.179153 GGGCTCGAGCTTTGATTTGC 60.179 55.000 34.46 15.76 41.70 3.68
303 304 1.131883 CAGGGCTCGAGCTTTGATTTG 59.868 52.381 34.46 18.17 41.70 2.32
304 305 1.457346 CAGGGCTCGAGCTTTGATTT 58.543 50.000 34.46 11.36 41.70 2.17
305 306 1.028868 GCAGGGCTCGAGCTTTGATT 61.029 55.000 34.46 12.69 41.70 2.57
306 307 1.451028 GCAGGGCTCGAGCTTTGAT 60.451 57.895 34.46 14.76 41.70 2.57
307 308 2.046892 GCAGGGCTCGAGCTTTGA 60.047 61.111 34.46 0.00 41.70 2.69
308 309 3.130160 GGCAGGGCTCGAGCTTTG 61.130 66.667 34.46 29.88 41.70 2.77
309 310 4.416738 GGGCAGGGCTCGAGCTTT 62.417 66.667 34.46 20.96 41.70 3.51
326 327 4.711949 AGCTGGGCTTGCACCTCG 62.712 66.667 0.00 0.00 33.89 4.63
327 328 2.749441 GAGCTGGGCTTGCACCTC 60.749 66.667 0.00 0.00 39.88 3.85
328 329 4.711949 CGAGCTGGGCTTGCACCT 62.712 66.667 0.00 0.00 39.88 4.00
384 385 1.000233 TAAACCTGGGCATGGGCAG 60.000 57.895 0.00 0.00 43.71 4.85
385 386 1.304879 GTAAACCTGGGCATGGGCA 60.305 57.895 0.00 0.00 43.71 5.36
386 387 2.414785 CGTAAACCTGGGCATGGGC 61.415 63.158 0.00 0.00 40.13 5.36
387 388 0.610785 AACGTAAACCTGGGCATGGG 60.611 55.000 0.00 0.00 0.00 4.00
388 389 0.808755 GAACGTAAACCTGGGCATGG 59.191 55.000 0.00 0.00 0.00 3.66
389 390 1.529226 TGAACGTAAACCTGGGCATG 58.471 50.000 0.00 0.00 0.00 4.06
390 391 2.279935 TTGAACGTAAACCTGGGCAT 57.720 45.000 0.00 0.00 0.00 4.40
391 392 2.279935 ATTGAACGTAAACCTGGGCA 57.720 45.000 0.00 0.00 0.00 5.36
392 393 2.554893 TGAATTGAACGTAAACCTGGGC 59.445 45.455 0.00 0.00 0.00 5.36
393 394 4.436852 CGATGAATTGAACGTAAACCTGGG 60.437 45.833 0.00 0.00 0.00 4.45
394 395 4.153475 ACGATGAATTGAACGTAAACCTGG 59.847 41.667 0.00 0.00 37.22 4.45
395 396 5.277601 ACGATGAATTGAACGTAAACCTG 57.722 39.130 0.00 0.00 37.22 4.00
396 397 5.334569 CCAACGATGAATTGAACGTAAACCT 60.335 40.000 0.02 0.00 38.00 3.50
397 398 4.849383 CCAACGATGAATTGAACGTAAACC 59.151 41.667 0.02 0.00 38.00 3.27
398 399 4.319901 GCCAACGATGAATTGAACGTAAAC 59.680 41.667 0.02 0.00 38.00 2.01
399 400 4.023963 TGCCAACGATGAATTGAACGTAAA 60.024 37.500 0.02 0.00 38.00 2.01
400 401 3.498777 TGCCAACGATGAATTGAACGTAA 59.501 39.130 0.02 0.00 38.00 3.18
401 402 3.067833 TGCCAACGATGAATTGAACGTA 58.932 40.909 0.02 0.00 38.00 3.57
402 403 1.876799 TGCCAACGATGAATTGAACGT 59.123 42.857 0.00 0.00 40.64 3.99
403 404 2.610219 TGCCAACGATGAATTGAACG 57.390 45.000 0.00 0.00 0.00 3.95
411 412 2.745884 CCCGCTTGCCAACGATGA 60.746 61.111 0.00 0.00 0.00 2.92
414 415 4.947147 AAGCCCGCTTGCCAACGA 62.947 61.111 0.05 0.00 34.60 3.85
431 432 2.048597 CCTACACAAGCACCGCGA 60.049 61.111 8.23 0.00 0.00 5.87
432 433 2.048597 TCCTACACAAGCACCGCG 60.049 61.111 0.00 0.00 0.00 6.46
464 465 7.782049 ACTTGAAATCGATACATCTAGAACCA 58.218 34.615 17.52 0.00 0.00 3.67
465 466 8.649973 AACTTGAAATCGATACATCTAGAACC 57.350 34.615 17.52 0.00 0.00 3.62
492 493 9.983024 TCCCTAATTAATTACAAAATCAGACCA 57.017 29.630 3.71 0.00 0.00 4.02
624 627 8.037166 GCAGGAAAAGTCTCCAAATATTTCAAT 58.963 33.333 0.00 0.00 38.02 2.57
625 628 7.378181 GCAGGAAAAGTCTCCAAATATTTCAA 58.622 34.615 0.00 0.00 38.02 2.69
626 629 6.071391 GGCAGGAAAAGTCTCCAAATATTTCA 60.071 38.462 0.00 0.00 38.02 2.69
655 658 1.043116 CGGCCAGGATGACTAGGACA 61.043 60.000 2.24 0.00 39.69 4.02
691 694 1.975680 ACTGGGTAAAGATGTGACGGT 59.024 47.619 0.00 0.00 0.00 4.83
713 717 2.342648 GCGATATCCCGTGGGGTC 59.657 66.667 4.81 0.82 44.74 4.46
740 744 6.182039 CAGATTTGGATAACATTGTGACGT 57.818 37.500 0.00 0.00 0.00 4.34
812 831 2.184322 GTGCGAGCGGGAAGATCA 59.816 61.111 0.00 0.00 34.30 2.92
814 833 4.162690 GGGTGCGAGCGGGAAGAT 62.163 66.667 0.00 0.00 0.00 2.40
867 887 0.461163 GTTTTGCTTTTGCCGGTGGT 60.461 50.000 1.90 0.00 46.87 4.16
908 928 4.650734 TGTGTTGATTCAGAATGGTGCTA 58.349 39.130 0.00 0.00 36.16 3.49
923 943 2.238521 GGCAAGGAGGAAATGTGTTGA 58.761 47.619 0.00 0.00 0.00 3.18
947 967 4.498520 ATCGTCGCTCGCTGGGTG 62.499 66.667 0.00 0.00 39.67 4.61
971 1000 4.228567 GGAGCTAGCCCGAGTGCC 62.229 72.222 12.13 0.00 0.00 5.01
974 1003 1.305381 AACAGGAGCTAGCCCGAGT 60.305 57.895 12.13 13.05 0.00 4.18
975 1004 1.142748 CAACAGGAGCTAGCCCGAG 59.857 63.158 12.13 12.46 0.00 4.63
976 1005 2.359169 CCAACAGGAGCTAGCCCGA 61.359 63.158 12.13 0.00 0.00 5.14
978 1007 2.124529 GCCAACAGGAGCTAGCCC 60.125 66.667 12.13 12.55 0.00 5.19
981 1010 2.512515 GCCGCCAACAGGAGCTAG 60.513 66.667 0.00 0.00 0.00 3.42
985 1014 3.197790 CATCGCCGCCAACAGGAG 61.198 66.667 0.00 0.00 0.00 3.69
986 1015 4.776322 CCATCGCCGCCAACAGGA 62.776 66.667 0.00 0.00 0.00 3.86
1038 1067 0.817634 CCTGGAACACCTGCACGAAA 60.818 55.000 0.00 0.00 0.00 3.46
1195 1224 0.308684 TCGTTATCGTCGCGGCTTAT 59.691 50.000 9.90 4.76 38.33 1.73
1196 1225 0.589729 GTCGTTATCGTCGCGGCTTA 60.590 55.000 9.90 0.00 38.33 3.09
1209 1238 0.942410 GGTGCAGCTCGTTGTCGTTA 60.942 55.000 9.07 0.00 38.33 3.18
1210 1239 2.244651 GGTGCAGCTCGTTGTCGTT 61.245 57.895 9.07 0.00 38.33 3.85
1271 1305 2.067365 AAGGAAAAACCGTCCTGCTT 57.933 45.000 0.00 0.00 45.12 3.91
1312 1350 1.210931 CATGCAGCCCGTGAACAAG 59.789 57.895 0.00 0.00 31.89 3.16
1313 1351 2.918345 GCATGCAGCCCGTGAACAA 61.918 57.895 14.21 0.00 37.23 2.83
1319 1357 4.166888 ATCGAGCATGCAGCCCGT 62.167 61.111 21.98 0.00 45.50 5.28
1320 1358 3.344215 GATCGAGCATGCAGCCCG 61.344 66.667 21.98 16.68 46.81 6.13
1331 1374 2.760374 GGGAATACTGCAAGGATCGAG 58.240 52.381 0.00 0.00 35.41 4.04
1338 1381 0.460284 ACGCTCGGGAATACTGCAAG 60.460 55.000 0.00 0.00 42.29 4.01
1342 1385 1.067582 GGGACGCTCGGGAATACTG 59.932 63.158 0.00 0.00 0.00 2.74
1343 1386 3.534941 GGGACGCTCGGGAATACT 58.465 61.111 0.00 0.00 0.00 2.12
1489 1532 7.889469 TGAAGAAATAACTCTAGTACCGTTGT 58.111 34.615 0.00 0.00 0.00 3.32
1546 1592 5.460748 CCGGGTCAAAAGTCAAAACAAATAC 59.539 40.000 0.00 0.00 0.00 1.89
1554 1600 1.394618 CACCCGGGTCAAAAGTCAAA 58.605 50.000 27.51 0.00 0.00 2.69
1555 1601 0.466555 CCACCCGGGTCAAAAGTCAA 60.467 55.000 27.51 0.00 0.00 3.18
1556 1602 1.149627 CCACCCGGGTCAAAAGTCA 59.850 57.895 27.51 0.00 0.00 3.41
1557 1603 2.265904 GCCACCCGGGTCAAAAGTC 61.266 63.158 27.51 0.00 39.65 3.01
1558 1604 2.203437 GCCACCCGGGTCAAAAGT 60.203 61.111 27.51 0.00 39.65 2.66
1559 1605 1.184970 AATGCCACCCGGGTCAAAAG 61.185 55.000 27.51 12.73 39.65 2.27
1560 1606 1.152440 AATGCCACCCGGGTCAAAA 60.152 52.632 27.51 10.54 39.65 2.44
1568 1614 2.274645 TTCTTGCCAATGCCACCCG 61.275 57.895 0.00 0.00 36.33 5.28
1603 1649 5.050769 ACGTTACGTACTCGGTATGATACAG 60.051 44.000 9.22 0.29 38.73 2.74
1605 1651 5.330271 ACGTTACGTACTCGGTATGATAC 57.670 43.478 9.22 0.00 38.73 2.24
1647 1693 4.973051 CGATAAGAAGATGACGTGAAGGAG 59.027 45.833 0.00 0.00 0.00 3.69
1675 1721 4.338964 GGTTAACCAGAGAGTAGCTAGGAC 59.661 50.000 20.12 0.00 35.64 3.85
1695 1741 9.132923 TGATCTCGACTGAATATTAGTTAGGTT 57.867 33.333 0.00 0.00 0.00 3.50
1696 1742 8.693120 TGATCTCGACTGAATATTAGTTAGGT 57.307 34.615 0.00 0.00 0.00 3.08
1697 1743 9.781834 GATGATCTCGACTGAATATTAGTTAGG 57.218 37.037 0.00 0.00 0.00 2.69
1736 1782 2.969990 CTGACTCAGCAATGCAGTACT 58.030 47.619 8.35 0.00 0.00 2.73
1825 1987 4.580580 GGGGCCAGATATTTCTAACTTGTG 59.419 45.833 4.39 0.00 0.00 3.33
1834 1996 4.081050 GCCGGGGCCAGATATTTC 57.919 61.111 4.39 0.00 34.56 2.17
1861 2038 3.004629 CAGGTGCTCAGTATGTTTTGCAA 59.995 43.478 0.00 0.00 37.40 4.08
1906 2088 7.704271 TCACCGTTTCAGATAAGACACTATAG 58.296 38.462 0.00 0.00 0.00 1.31
1924 2106 0.535553 TTTTAGCCGCCTTCACCGTT 60.536 50.000 0.00 0.00 0.00 4.44
1959 2141 6.017934 TGCTGAGTAGAAAAGTCATCAACAAC 60.018 38.462 0.00 0.00 36.93 3.32
2024 2215 3.492011 GTCGTTTAACAATCAGTGGTCGT 59.508 43.478 0.00 0.00 0.00 4.34
2099 2290 2.351835 GCACAAGCTAGAACTGTCGAGA 60.352 50.000 0.00 0.00 37.91 4.04
2100 2291 1.989165 GCACAAGCTAGAACTGTCGAG 59.011 52.381 0.00 0.00 37.91 4.04
2101 2292 1.666023 CGCACAAGCTAGAACTGTCGA 60.666 52.381 0.00 0.00 39.10 4.20
2117 2308 1.074872 GTAGTACAGGGTTCGCGCAC 61.075 60.000 8.75 0.00 0.00 5.34
2176 2369 6.849811 CACGCACAAATCTGATTATCTGAATC 59.150 38.462 2.85 0.00 0.00 2.52
2179 2372 5.418676 TCACGCACAAATCTGATTATCTGA 58.581 37.500 2.85 4.34 0.00 3.27
2202 2395 2.413310 ATACGATTCCGCCAGGTTTT 57.587 45.000 0.00 0.00 39.95 2.43
2203 2396 2.168936 TGTATACGATTCCGCCAGGTTT 59.831 45.455 0.00 0.00 39.95 3.27
2204 2397 1.758280 TGTATACGATTCCGCCAGGTT 59.242 47.619 0.00 0.00 39.95 3.50
2205 2398 1.405872 TGTATACGATTCCGCCAGGT 58.594 50.000 0.00 0.00 39.95 4.00
2206 2399 2.029380 TGATGTATACGATTCCGCCAGG 60.029 50.000 0.00 0.00 39.95 4.45
2207 2400 3.297830 TGATGTATACGATTCCGCCAG 57.702 47.619 0.00 0.00 39.95 4.85
2208 2401 3.953712 ATGATGTATACGATTCCGCCA 57.046 42.857 0.00 0.00 39.95 5.69
2209 2402 4.688879 TCAAATGATGTATACGATTCCGCC 59.311 41.667 0.00 0.00 39.95 6.13
2210 2403 5.609088 GTCAAATGATGTATACGATTCCGC 58.391 41.667 0.00 0.00 39.95 5.54
2211 2404 5.164090 CCGTCAAATGATGTATACGATTCCG 60.164 44.000 0.00 0.00 42.50 4.30
2212 2405 5.924254 TCCGTCAAATGATGTATACGATTCC 59.076 40.000 0.00 0.00 30.66 3.01
2213 2406 7.448228 CATCCGTCAAATGATGTATACGATTC 58.552 38.462 0.00 0.00 34.90 2.52
2214 2407 6.128553 GCATCCGTCAAATGATGTATACGATT 60.129 38.462 0.00 0.00 40.37 3.34
2215 2408 5.348724 GCATCCGTCAAATGATGTATACGAT 59.651 40.000 0.00 0.00 40.37 3.73
2216 2409 4.684242 GCATCCGTCAAATGATGTATACGA 59.316 41.667 0.00 0.00 40.37 3.43
2217 2410 4.686091 AGCATCCGTCAAATGATGTATACG 59.314 41.667 0.00 0.00 40.37 3.06
2218 2411 5.696270 TGAGCATCCGTCAAATGATGTATAC 59.304 40.000 0.00 0.00 40.37 1.47
2219 2412 5.852827 TGAGCATCCGTCAAATGATGTATA 58.147 37.500 2.23 0.00 40.37 1.47
2220 2413 4.707105 TGAGCATCCGTCAAATGATGTAT 58.293 39.130 2.23 0.00 40.37 2.29
2221 2414 4.122046 CTGAGCATCCGTCAAATGATGTA 58.878 43.478 2.23 0.00 40.37 2.29
2222 2415 2.941064 CTGAGCATCCGTCAAATGATGT 59.059 45.455 2.23 0.00 40.37 3.06
2223 2416 3.200483 TCTGAGCATCCGTCAAATGATG 58.800 45.455 0.00 0.00 41.02 3.07
2224 2417 3.548745 TCTGAGCATCCGTCAAATGAT 57.451 42.857 0.00 0.00 0.00 2.45
2225 2418 3.264947 CTTCTGAGCATCCGTCAAATGA 58.735 45.455 0.00 0.00 0.00 2.57
2226 2419 3.005554 ACTTCTGAGCATCCGTCAAATG 58.994 45.455 0.00 0.00 0.00 2.32
2227 2420 3.340814 ACTTCTGAGCATCCGTCAAAT 57.659 42.857 0.00 0.00 0.00 2.32
2228 2421 2.839486 ACTTCTGAGCATCCGTCAAA 57.161 45.000 0.00 0.00 0.00 2.69
2229 2422 2.826128 ACTACTTCTGAGCATCCGTCAA 59.174 45.455 0.00 0.00 0.00 3.18
2230 2423 2.447443 ACTACTTCTGAGCATCCGTCA 58.553 47.619 0.00 0.00 0.00 4.35
2231 2424 3.628487 AGTACTACTTCTGAGCATCCGTC 59.372 47.826 0.00 0.00 0.00 4.79
2232 2425 3.622630 AGTACTACTTCTGAGCATCCGT 58.377 45.455 0.00 0.00 0.00 4.69
2233 2426 5.505985 GGTTAGTACTACTTCTGAGCATCCG 60.506 48.000 0.91 0.00 0.00 4.18
2234 2427 5.834169 GGTTAGTACTACTTCTGAGCATCC 58.166 45.833 0.91 0.00 0.00 3.51



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.