Multiple sequence alignment - TraesCS2B01G541100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G541100 chr2B 100.000 2479 0 0 1 2479 737448773 737451251 0.000000e+00 4578.0
1 TraesCS2B01G541100 chr2B 85.542 332 42 4 1082 1412 737050197 737050523 2.360000e-90 342.0
2 TraesCS2B01G541100 chr2B 85.965 57 4 4 864 917 737050048 737050103 9.580000e-05 58.4
3 TraesCS2B01G541100 chr7A 96.547 753 20 3 1598 2349 8690405 8691152 0.000000e+00 1242.0
4 TraesCS2B01G541100 chr2D 90.625 640 46 4 789 1422 606382903 606383534 0.000000e+00 837.0
5 TraesCS2B01G541100 chr2D 89.919 496 45 1 1849 2344 424115516 424115026 3.480000e-178 634.0
6 TraesCS2B01G541100 chr2D 95.122 369 17 1 123 490 606382169 606382537 4.600000e-162 580.0
7 TraesCS2B01G541100 chr2D 93.548 310 15 3 501 810 606382587 606382891 8.080000e-125 457.0
8 TraesCS2B01G541100 chr2D 83.508 382 46 13 1082 1453 606132731 606133105 8.490000e-90 340.0
9 TraesCS2B01G541100 chr2D 80.859 256 28 9 1596 1850 424126771 424126536 5.450000e-42 182.0
10 TraesCS2B01G541100 chr2D 89.412 85 5 4 129 211 120517173 120517091 1.210000e-18 104.0
11 TraesCS2B01G541100 chr2D 90.698 43 1 2 862 901 606132570 606132612 1.000000e-03 54.7
12 TraesCS2B01G541100 chr2A 90.808 359 29 3 1973 2328 564096955 564097312 6.200000e-131 477.0
13 TraesCS2B01G541100 chr2A 86.325 234 31 1 1082 1315 737829670 737829902 1.140000e-63 254.0
14 TraesCS2B01G541100 chr1D 96.748 123 4 0 1 123 319517593 319517715 3.230000e-49 206.0
15 TraesCS2B01G541100 chr7D 95.968 124 5 0 1 124 131639265 131639142 4.180000e-48 202.0
16 TraesCS2B01G541100 chr7D 95.238 126 4 1 1 126 117521515 117521638 5.410000e-47 198.0
17 TraesCS2B01G541100 chr7D 83.333 78 11 2 2365 2441 38005487 38005411 1.230000e-08 71.3
18 TraesCS2B01G541100 chrUn 95.935 123 5 0 1 123 121738547 121738425 1.500000e-47 200.0
19 TraesCS2B01G541100 chr6D 95.935 123 5 0 1 123 369865108 369864986 1.500000e-47 200.0
20 TraesCS2B01G541100 chr6D 84.783 92 12 2 123 213 433488744 433488834 9.440000e-15 91.6
21 TraesCS2B01G541100 chr6B 95.276 127 5 1 1 127 129298745 129298870 1.500000e-47 200.0
22 TraesCS2B01G541100 chr4D 95.935 123 5 0 1 123 306374306 306374184 1.500000e-47 200.0
23 TraesCS2B01G541100 chr4D 95.935 123 5 0 1 123 462815416 462815294 1.500000e-47 200.0
24 TraesCS2B01G541100 chr4D 85.714 91 10 3 129 218 337991995 337991907 2.630000e-15 93.5
25 TraesCS2B01G541100 chr5D 95.238 126 5 1 1 126 389374252 389374128 5.410000e-47 198.0
26 TraesCS2B01G541100 chr5B 86.364 132 17 1 2348 2479 579519703 579519573 2.570000e-30 143.0
27 TraesCS2B01G541100 chr1A 87.156 109 13 1 2350 2458 425711328 425711435 3.350000e-24 122.0
28 TraesCS2B01G541100 chr4B 82.812 128 21 1 2348 2475 535103649 535103523 2.020000e-21 113.0
29 TraesCS2B01G541100 chr4B 87.209 86 8 3 129 213 260334476 260334559 7.300000e-16 95.3
30 TraesCS2B01G541100 chr3B 89.535 86 7 2 129 213 123430248 123430332 9.380000e-20 108.0
31 TraesCS2B01G541100 chr3B 87.059 85 11 0 129 213 740878879 740878795 2.030000e-16 97.1
32 TraesCS2B01G541100 chr4A 82.883 111 18 1 2348 2458 581867425 581867316 5.640000e-17 99.0
33 TraesCS2B01G541100 chr4A 86.022 93 9 4 123 213 170620669 170620759 2.030000e-16 97.1
34 TraesCS2B01G541100 chr7B 84.946 93 12 2 123 214 507209610 507209701 2.630000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G541100 chr2B 737448773 737451251 2478 False 4578.000000 4578 100.000000 1 2479 1 chr2B.!!$F1 2478
1 TraesCS2B01G541100 chr7A 8690405 8691152 747 False 1242.000000 1242 96.547000 1598 2349 1 chr7A.!!$F1 751
2 TraesCS2B01G541100 chr2D 606382169 606383534 1365 False 624.666667 837 93.098333 123 1422 3 chr2D.!!$F2 1299

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
114 115 0.035343 CGGGGTTCCTCCTCCTTTTC 60.035 60.0 0.0 0.0 36.25 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1564 1644 0.036875 GACTGGGGAGGGAGTTTGTG 59.963 60.0 0.0 0.0 0.0 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.820894 AGACGGTGGCTTTAATCTTACT 57.179 40.909 0.00 0.00 0.00 2.24
23 24 4.504858 AGACGGTGGCTTTAATCTTACTG 58.495 43.478 0.00 0.00 0.00 2.74
24 25 4.020485 AGACGGTGGCTTTAATCTTACTGT 60.020 41.667 0.00 0.00 0.00 3.55
25 26 4.648651 ACGGTGGCTTTAATCTTACTGTT 58.351 39.130 0.00 0.00 0.00 3.16
26 27 4.454504 ACGGTGGCTTTAATCTTACTGTTG 59.545 41.667 0.00 0.00 0.00 3.33
27 28 4.454504 CGGTGGCTTTAATCTTACTGTTGT 59.545 41.667 0.00 0.00 0.00 3.32
28 29 5.640357 CGGTGGCTTTAATCTTACTGTTGTA 59.360 40.000 0.00 0.00 0.00 2.41
29 30 6.315393 CGGTGGCTTTAATCTTACTGTTGTAT 59.685 38.462 0.00 0.00 0.00 2.29
30 31 7.472543 GGTGGCTTTAATCTTACTGTTGTATG 58.527 38.462 0.00 0.00 0.00 2.39
31 32 7.335924 GGTGGCTTTAATCTTACTGTTGTATGA 59.664 37.037 0.00 0.00 37.28 2.15
32 33 8.175716 GTGGCTTTAATCTTACTGTTGTATGAC 58.824 37.037 0.00 0.00 36.22 3.06
33 34 8.100791 TGGCTTTAATCTTACTGTTGTATGACT 58.899 33.333 0.00 0.00 36.22 3.41
34 35 8.947115 GGCTTTAATCTTACTGTTGTATGACTT 58.053 33.333 0.00 0.00 36.22 3.01
41 42 8.827177 TCTTACTGTTGTATGACTTTGTAAGG 57.173 34.615 0.00 0.00 37.36 2.69
42 43 8.426489 TCTTACTGTTGTATGACTTTGTAAGGT 58.574 33.333 0.00 0.00 37.36 3.50
43 44 8.597662 TTACTGTTGTATGACTTTGTAAGGTC 57.402 34.615 0.44 0.44 0.00 3.85
44 45 6.827727 ACTGTTGTATGACTTTGTAAGGTCT 58.172 36.000 8.11 0.00 34.01 3.85
45 46 7.280356 ACTGTTGTATGACTTTGTAAGGTCTT 58.720 34.615 8.11 4.91 34.01 3.01
46 47 7.226720 ACTGTTGTATGACTTTGTAAGGTCTTG 59.773 37.037 8.11 0.00 34.01 3.02
47 48 7.051623 TGTTGTATGACTTTGTAAGGTCTTGT 58.948 34.615 8.11 0.00 34.01 3.16
48 49 7.011950 TGTTGTATGACTTTGTAAGGTCTTGTG 59.988 37.037 8.11 0.00 34.01 3.33
49 50 6.588204 TGTATGACTTTGTAAGGTCTTGTGT 58.412 36.000 8.11 0.00 34.01 3.72
50 51 6.481976 TGTATGACTTTGTAAGGTCTTGTGTG 59.518 38.462 8.11 0.00 34.01 3.82
51 52 5.092554 TGACTTTGTAAGGTCTTGTGTGA 57.907 39.130 8.11 0.00 34.01 3.58
52 53 5.492895 TGACTTTGTAAGGTCTTGTGTGAA 58.507 37.500 8.11 0.00 34.01 3.18
53 54 6.119536 TGACTTTGTAAGGTCTTGTGTGAAT 58.880 36.000 8.11 0.00 34.01 2.57
54 55 7.276658 TGACTTTGTAAGGTCTTGTGTGAATA 58.723 34.615 8.11 0.00 34.01 1.75
55 56 7.771361 TGACTTTGTAAGGTCTTGTGTGAATAA 59.229 33.333 8.11 0.00 34.01 1.40
56 57 8.691661 ACTTTGTAAGGTCTTGTGTGAATAAT 57.308 30.769 0.00 0.00 0.00 1.28
57 58 9.131791 ACTTTGTAAGGTCTTGTGTGAATAATT 57.868 29.630 0.00 0.00 0.00 1.40
70 71 9.853555 TTGTGTGAATAATTAATAAAGTGGCTG 57.146 29.630 0.00 0.00 0.00 4.85
71 72 7.973388 TGTGTGAATAATTAATAAAGTGGCTGC 59.027 33.333 0.00 0.00 0.00 5.25
72 73 7.973388 GTGTGAATAATTAATAAAGTGGCTGCA 59.027 33.333 0.50 0.00 0.00 4.41
73 74 8.694540 TGTGAATAATTAATAAAGTGGCTGCAT 58.305 29.630 0.50 0.00 0.00 3.96
74 75 8.971321 GTGAATAATTAATAAAGTGGCTGCATG 58.029 33.333 0.50 0.00 0.00 4.06
75 76 7.652909 TGAATAATTAATAAAGTGGCTGCATGC 59.347 33.333 11.82 11.82 41.94 4.06
76 77 5.341872 AATTAATAAAGTGGCTGCATGCA 57.658 34.783 21.29 21.29 45.15 3.96
77 78 5.540400 ATTAATAAAGTGGCTGCATGCAT 57.460 34.783 22.97 6.91 45.15 3.96
78 79 3.447918 AATAAAGTGGCTGCATGCATC 57.552 42.857 22.97 17.75 45.15 3.91
79 80 1.836802 TAAAGTGGCTGCATGCATCA 58.163 45.000 22.97 19.21 45.15 3.07
80 81 1.191535 AAAGTGGCTGCATGCATCAT 58.808 45.000 22.97 6.18 45.15 2.45
81 82 0.744874 AAGTGGCTGCATGCATCATC 59.255 50.000 22.97 13.27 45.15 2.92
82 83 1.107538 AGTGGCTGCATGCATCATCC 61.108 55.000 22.97 19.03 45.15 3.51
83 84 1.076632 TGGCTGCATGCATCATCCA 60.077 52.632 22.97 21.25 45.15 3.41
84 85 1.106944 TGGCTGCATGCATCATCCAG 61.107 55.000 22.97 8.76 45.15 3.86
85 86 0.822121 GGCTGCATGCATCATCCAGA 60.822 55.000 22.97 0.00 45.15 3.86
86 87 1.248486 GCTGCATGCATCATCCAGAT 58.752 50.000 22.97 0.00 42.31 2.90
93 94 2.244946 CATCATCCAGATGCAGCGG 58.755 57.895 6.51 6.51 46.90 5.52
94 95 1.600076 ATCATCCAGATGCAGCGGC 60.600 57.895 0.31 0.31 38.65 6.53
95 96 3.285215 CATCCAGATGCAGCGGCC 61.285 66.667 6.32 0.00 40.13 6.13
96 97 4.923942 ATCCAGATGCAGCGGCCG 62.924 66.667 24.05 24.05 40.13 6.13
111 112 2.285442 CCGGGGTTCCTCCTCCTT 60.285 66.667 0.00 0.00 36.25 3.36
112 113 1.923909 CCGGGGTTCCTCCTCCTTT 60.924 63.158 0.00 0.00 36.25 3.11
113 114 1.498176 CCGGGGTTCCTCCTCCTTTT 61.498 60.000 0.00 0.00 36.25 2.27
114 115 0.035343 CGGGGTTCCTCCTCCTTTTC 60.035 60.000 0.00 0.00 36.25 2.29
115 116 1.373536 GGGGTTCCTCCTCCTTTTCT 58.626 55.000 0.00 0.00 36.25 2.52
116 117 2.558974 GGGGTTCCTCCTCCTTTTCTA 58.441 52.381 0.00 0.00 36.25 2.10
117 118 2.917600 GGGGTTCCTCCTCCTTTTCTAA 59.082 50.000 0.00 0.00 36.25 2.10
118 119 3.332783 GGGGTTCCTCCTCCTTTTCTAAA 59.667 47.826 0.00 0.00 36.25 1.85
119 120 4.202641 GGGGTTCCTCCTCCTTTTCTAAAA 60.203 45.833 0.00 0.00 36.25 1.52
120 121 5.391256 GGGTTCCTCCTCCTTTTCTAAAAA 58.609 41.667 0.00 0.00 36.25 1.94
216 217 6.299805 TCTAGAGCATATTTCCAACAGTGT 57.700 37.500 0.00 0.00 0.00 3.55
220 221 6.893583 AGAGCATATTTCCAACAGTGTCTAT 58.106 36.000 0.00 0.00 0.00 1.98
225 226 9.109393 GCATATTTCCAACAGTGTCTATCTTTA 57.891 33.333 0.00 0.00 0.00 1.85
232 233 4.938080 ACAGTGTCTATCTTTATCGCCTG 58.062 43.478 0.00 0.00 0.00 4.85
283 284 1.006102 ACCGCAACTGAGAACGAGG 60.006 57.895 0.00 0.00 0.00 4.63
291 292 1.115467 CTGAGAACGAGGGGCATACT 58.885 55.000 0.00 0.00 0.00 2.12
335 337 2.572209 TATTTGGCTATAACCCCCGC 57.428 50.000 0.00 0.00 0.00 6.13
339 341 2.144738 GGCTATAACCCCCGCTGGA 61.145 63.158 0.00 0.00 35.39 3.86
438 440 7.711772 TCGATGAACACCTTACAAACTTTTAGA 59.288 33.333 0.00 0.00 0.00 2.10
490 492 8.730680 GTTTTAAGACTAGCTTGAATTCCATCA 58.269 33.333 1.04 0.00 37.42 3.07
491 493 9.466497 TTTTAAGACTAGCTTGAATTCCATCAT 57.534 29.630 1.04 0.00 37.42 2.45
495 497 9.717942 AAGACTAGCTTGAATTCCATCATATAC 57.282 33.333 1.04 0.00 34.93 1.47
499 501 9.814899 CTAGCTTGAATTCCATCATATACTAGG 57.185 37.037 2.27 0.00 0.00 3.02
561 602 5.911752 TCTTGAGAAGATATTGAGTGAGGC 58.088 41.667 0.00 0.00 31.20 4.70
565 606 4.036518 AGAAGATATTGAGTGAGGCCTGT 58.963 43.478 12.00 0.00 0.00 4.00
566 607 4.100808 AGAAGATATTGAGTGAGGCCTGTC 59.899 45.833 12.00 4.42 0.00 3.51
584 625 7.045416 GGCCTGTCTTTTCTTTTCCTTTTTAA 58.955 34.615 0.00 0.00 0.00 1.52
728 769 1.449601 CGACTGGCCCATACACACC 60.450 63.158 0.00 0.00 0.00 4.16
756 797 3.129813 GGACTTGTCCTTCCGTTTGTTTT 59.870 43.478 12.20 0.00 0.00 2.43
758 799 3.508402 ACTTGTCCTTCCGTTTGTTTTGT 59.492 39.130 0.00 0.00 0.00 2.83
834 908 2.025155 GATTCCGCCTGTCTAGACTCA 58.975 52.381 23.01 3.67 0.00 3.41
845 919 3.628032 TGTCTAGACTCATCATCACGTCC 59.372 47.826 23.01 0.00 0.00 4.79
852 926 5.419155 AGACTCATCATCACGTCCTCTTTAA 59.581 40.000 0.00 0.00 0.00 1.52
893 967 6.216569 ACGACGATAATAACAGCTCATTCAT 58.783 36.000 0.00 0.00 0.00 2.57
908 982 2.542837 TTCATTTCGTTCGCGCTCGC 62.543 55.000 5.56 3.90 41.05 5.03
941 1015 1.570813 GGCAAAAGCAAAGTCACACC 58.429 50.000 0.00 0.00 0.00 4.16
942 1016 1.134848 GGCAAAAGCAAAGTCACACCA 60.135 47.619 0.00 0.00 0.00 4.17
943 1017 1.926510 GCAAAAGCAAAGTCACACCAC 59.073 47.619 0.00 0.00 0.00 4.16
944 1018 2.539476 CAAAAGCAAAGTCACACCACC 58.461 47.619 0.00 0.00 0.00 4.61
945 1019 0.738389 AAAGCAAAGTCACACCACCG 59.262 50.000 0.00 0.00 0.00 4.94
946 1020 0.107410 AAGCAAAGTCACACCACCGA 60.107 50.000 0.00 0.00 0.00 4.69
962 1036 2.496817 GACACCGAGGCAGCCTAG 59.503 66.667 16.16 15.25 31.76 3.02
998 1072 2.278989 AACGTCCACGGTCACACG 60.279 61.111 3.81 2.43 44.95 4.49
1010 1084 3.857854 CACACGCTCGCAGCATCC 61.858 66.667 8.52 0.00 42.58 3.51
1018 1092 0.108472 CTCGCAGCATCCAGAGACAA 60.108 55.000 0.00 0.00 32.84 3.18
1019 1093 0.321346 TCGCAGCATCCAGAGACAAA 59.679 50.000 0.00 0.00 0.00 2.83
1037 1111 2.202544 GGCGAGACGTGCTCTCAG 60.203 66.667 0.00 0.00 45.43 3.35
1045 1119 2.375766 CGTGCTCTCAGTTGCGACC 61.376 63.158 0.00 0.00 0.00 4.79
1050 1124 0.600557 CTCTCAGTTGCGACCAGAGT 59.399 55.000 18.62 0.00 32.42 3.24
1051 1125 1.813178 CTCTCAGTTGCGACCAGAGTA 59.187 52.381 18.62 8.88 32.42 2.59
1116 1196 2.886523 CTGAGCAGAGCTAGCTAGTCAT 59.113 50.000 19.38 8.63 43.58 3.06
1124 1204 1.203523 GCTAGCTAGTCATCGATGGGG 59.796 57.143 24.61 13.00 0.00 4.96
1388 1468 2.552031 CTCGACGTCTCCTACTGATCA 58.448 52.381 14.70 0.00 0.00 2.92
1431 1511 4.427661 GGCAGTGTCGCTCTCGCT 62.428 66.667 0.00 0.00 35.26 4.93
1432 1512 2.878520 GCAGTGTCGCTCTCGCTC 60.879 66.667 0.00 0.00 35.26 5.03
1433 1513 2.575525 CAGTGTCGCTCTCGCTCG 60.576 66.667 0.00 0.00 35.26 5.03
1434 1514 4.468615 AGTGTCGCTCTCGCTCGC 62.469 66.667 0.00 0.00 35.26 5.03
1447 1527 4.749310 CTCGCCGCTTCCAGTGCT 62.749 66.667 0.00 0.00 0.00 4.40
1450 1530 3.730761 GCCGCTTCCAGTGCTGTG 61.731 66.667 0.00 0.00 0.00 3.66
1451 1531 3.052082 CCGCTTCCAGTGCTGTGG 61.052 66.667 0.00 0.00 39.19 4.17
1452 1532 3.730761 CGCTTCCAGTGCTGTGGC 61.731 66.667 0.26 0.00 37.53 5.01
1453 1533 2.282040 GCTTCCAGTGCTGTGGCT 60.282 61.111 0.26 0.00 37.53 4.75
1454 1534 1.900498 GCTTCCAGTGCTGTGGCTT 60.900 57.895 0.26 0.00 37.53 4.35
1455 1535 0.606401 GCTTCCAGTGCTGTGGCTTA 60.606 55.000 0.26 0.00 37.53 3.09
1456 1536 1.160137 CTTCCAGTGCTGTGGCTTAC 58.840 55.000 0.26 0.00 37.53 2.34
1457 1537 0.602638 TTCCAGTGCTGTGGCTTACG 60.603 55.000 0.26 0.00 37.53 3.18
1458 1538 1.005037 CCAGTGCTGTGGCTTACGA 60.005 57.895 0.00 0.00 39.59 3.43
1459 1539 1.016130 CCAGTGCTGTGGCTTACGAG 61.016 60.000 0.00 0.00 39.59 4.18
1460 1540 0.319900 CAGTGCTGTGGCTTACGAGT 60.320 55.000 0.00 0.00 39.59 4.18
1461 1541 0.393077 AGTGCTGTGGCTTACGAGTT 59.607 50.000 0.00 0.00 39.59 3.01
1462 1542 1.616865 AGTGCTGTGGCTTACGAGTTA 59.383 47.619 0.00 0.00 39.59 2.24
1463 1543 1.993370 GTGCTGTGGCTTACGAGTTAG 59.007 52.381 0.00 0.00 39.59 2.34
1464 1544 1.067142 TGCTGTGGCTTACGAGTTAGG 60.067 52.381 0.00 0.00 39.59 2.69
1465 1545 1.203994 GCTGTGGCTTACGAGTTAGGA 59.796 52.381 0.00 0.00 35.22 2.94
1466 1546 2.877335 CTGTGGCTTACGAGTTAGGAC 58.123 52.381 0.00 0.00 0.00 3.85
1467 1547 1.200716 TGTGGCTTACGAGTTAGGACG 59.799 52.381 0.00 0.00 0.00 4.79
1468 1548 1.200948 GTGGCTTACGAGTTAGGACGT 59.799 52.381 0.00 0.00 44.72 4.34
1469 1549 1.888512 TGGCTTACGAGTTAGGACGTT 59.111 47.619 0.00 0.00 42.61 3.99
1470 1550 2.257034 GGCTTACGAGTTAGGACGTTG 58.743 52.381 0.00 0.00 42.61 4.10
1471 1551 2.352127 GGCTTACGAGTTAGGACGTTGT 60.352 50.000 0.00 0.00 42.61 3.32
1472 1552 2.660236 GCTTACGAGTTAGGACGTTGTG 59.340 50.000 0.00 0.00 42.61 3.33
1473 1553 3.854784 GCTTACGAGTTAGGACGTTGTGT 60.855 47.826 0.00 0.00 42.61 3.72
1474 1554 2.877043 ACGAGTTAGGACGTTGTGTT 57.123 45.000 0.00 0.00 39.75 3.32
1475 1555 3.169355 ACGAGTTAGGACGTTGTGTTT 57.831 42.857 0.00 0.00 39.75 2.83
1476 1556 3.118542 ACGAGTTAGGACGTTGTGTTTC 58.881 45.455 0.00 0.00 39.75 2.78
1477 1557 3.181483 ACGAGTTAGGACGTTGTGTTTCT 60.181 43.478 0.00 0.00 39.75 2.52
1478 1558 3.424529 CGAGTTAGGACGTTGTGTTTCTC 59.575 47.826 0.00 0.00 0.00 2.87
1479 1559 3.378339 AGTTAGGACGTTGTGTTTCTCG 58.622 45.455 0.00 0.00 0.00 4.04
1480 1560 3.118542 GTTAGGACGTTGTGTTTCTCGT 58.881 45.455 0.00 0.00 39.21 4.18
1481 1561 2.304751 AGGACGTTGTGTTTCTCGTT 57.695 45.000 0.00 0.00 36.67 3.85
1482 1562 2.624636 AGGACGTTGTGTTTCTCGTTT 58.375 42.857 0.00 0.00 36.67 3.60
1483 1563 2.350498 AGGACGTTGTGTTTCTCGTTTG 59.650 45.455 0.00 0.00 36.67 2.93
1484 1564 2.094734 GGACGTTGTGTTTCTCGTTTGT 59.905 45.455 0.00 0.00 36.67 2.83
1485 1565 3.425227 GGACGTTGTGTTTCTCGTTTGTT 60.425 43.478 0.00 0.00 36.67 2.83
1486 1566 3.739494 ACGTTGTGTTTCTCGTTTGTTC 58.261 40.909 0.00 0.00 32.62 3.18
1487 1567 3.434299 ACGTTGTGTTTCTCGTTTGTTCT 59.566 39.130 0.00 0.00 32.62 3.01
1488 1568 4.626604 ACGTTGTGTTTCTCGTTTGTTCTA 59.373 37.500 0.00 0.00 32.62 2.10
1489 1569 5.292589 ACGTTGTGTTTCTCGTTTGTTCTAT 59.707 36.000 0.00 0.00 32.62 1.98
1490 1570 6.183360 ACGTTGTGTTTCTCGTTTGTTCTATT 60.183 34.615 0.00 0.00 32.62 1.73
1491 1571 6.138546 CGTTGTGTTTCTCGTTTGTTCTATTG 59.861 38.462 0.00 0.00 0.00 1.90
1492 1572 6.055231 TGTGTTTCTCGTTTGTTCTATTGG 57.945 37.500 0.00 0.00 0.00 3.16
1493 1573 5.587043 TGTGTTTCTCGTTTGTTCTATTGGT 59.413 36.000 0.00 0.00 0.00 3.67
1494 1574 6.094325 TGTGTTTCTCGTTTGTTCTATTGGTT 59.906 34.615 0.00 0.00 0.00 3.67
1495 1575 6.631636 GTGTTTCTCGTTTGTTCTATTGGTTC 59.368 38.462 0.00 0.00 0.00 3.62
1496 1576 5.934935 TTCTCGTTTGTTCTATTGGTTCC 57.065 39.130 0.00 0.00 0.00 3.62
1497 1577 5.223449 TCTCGTTTGTTCTATTGGTTCCT 57.777 39.130 0.00 0.00 0.00 3.36
1498 1578 5.617252 TCTCGTTTGTTCTATTGGTTCCTT 58.383 37.500 0.00 0.00 0.00 3.36
1499 1579 5.468746 TCTCGTTTGTTCTATTGGTTCCTTG 59.531 40.000 0.00 0.00 0.00 3.61
1500 1580 4.023536 TCGTTTGTTCTATTGGTTCCTTGC 60.024 41.667 0.00 0.00 0.00 4.01
1501 1581 4.023193 CGTTTGTTCTATTGGTTCCTTGCT 60.023 41.667 0.00 0.00 0.00 3.91
1502 1582 5.461526 GTTTGTTCTATTGGTTCCTTGCTC 58.538 41.667 0.00 0.00 0.00 4.26
1503 1583 4.365514 TGTTCTATTGGTTCCTTGCTCA 57.634 40.909 0.00 0.00 0.00 4.26
1504 1584 4.922206 TGTTCTATTGGTTCCTTGCTCAT 58.078 39.130 0.00 0.00 0.00 2.90
1505 1585 5.324409 TGTTCTATTGGTTCCTTGCTCATT 58.676 37.500 0.00 0.00 0.00 2.57
1506 1586 5.774690 TGTTCTATTGGTTCCTTGCTCATTT 59.225 36.000 0.00 0.00 0.00 2.32
1507 1587 6.945435 TGTTCTATTGGTTCCTTGCTCATTTA 59.055 34.615 0.00 0.00 0.00 1.40
1508 1588 7.615365 TGTTCTATTGGTTCCTTGCTCATTTAT 59.385 33.333 0.00 0.00 0.00 1.40
1509 1589 7.807977 TCTATTGGTTCCTTGCTCATTTATC 57.192 36.000 0.00 0.00 0.00 1.75
1510 1590 7.577303 TCTATTGGTTCCTTGCTCATTTATCT 58.423 34.615 0.00 0.00 0.00 1.98
1511 1591 8.055181 TCTATTGGTTCCTTGCTCATTTATCTT 58.945 33.333 0.00 0.00 0.00 2.40
1512 1592 6.916360 TTGGTTCCTTGCTCATTTATCTTT 57.084 33.333 0.00 0.00 0.00 2.52
1513 1593 6.515272 TGGTTCCTTGCTCATTTATCTTTC 57.485 37.500 0.00 0.00 0.00 2.62
1514 1594 5.418840 TGGTTCCTTGCTCATTTATCTTTCC 59.581 40.000 0.00 0.00 0.00 3.13
1515 1595 5.163509 GGTTCCTTGCTCATTTATCTTTCCC 60.164 44.000 0.00 0.00 0.00 3.97
1516 1596 4.199310 TCCTTGCTCATTTATCTTTCCCG 58.801 43.478 0.00 0.00 0.00 5.14
1517 1597 3.316308 CCTTGCTCATTTATCTTTCCCGG 59.684 47.826 0.00 0.00 0.00 5.73
1518 1598 2.930950 TGCTCATTTATCTTTCCCGGG 58.069 47.619 16.85 16.85 0.00 5.73
1519 1599 2.507886 TGCTCATTTATCTTTCCCGGGA 59.492 45.455 22.63 22.63 0.00 5.14
1520 1600 3.142174 GCTCATTTATCTTTCCCGGGAG 58.858 50.000 25.26 13.89 0.00 4.30
1521 1601 3.433740 GCTCATTTATCTTTCCCGGGAGT 60.434 47.826 25.26 13.66 0.00 3.85
1522 1602 4.781934 CTCATTTATCTTTCCCGGGAGTT 58.218 43.478 25.26 10.84 0.00 3.01
1523 1603 4.523083 TCATTTATCTTTCCCGGGAGTTG 58.477 43.478 25.26 17.32 0.00 3.16
1524 1604 2.413310 TTATCTTTCCCGGGAGTTGC 57.587 50.000 25.26 0.00 0.00 4.17
1525 1605 0.177141 TATCTTTCCCGGGAGTTGCG 59.823 55.000 25.26 11.41 0.00 4.85
1526 1606 1.838073 ATCTTTCCCGGGAGTTGCGT 61.838 55.000 25.26 6.32 0.00 5.24
1527 1607 2.281208 TTTCCCGGGAGTTGCGTG 60.281 61.111 25.26 0.00 0.00 5.34
1528 1608 2.725203 CTTTCCCGGGAGTTGCGTGA 62.725 60.000 25.26 2.54 0.00 4.35
1529 1609 2.119484 TTTCCCGGGAGTTGCGTGAT 62.119 55.000 25.26 0.00 0.00 3.06
1530 1610 2.511600 CCCGGGAGTTGCGTGATC 60.512 66.667 18.48 0.00 0.00 2.92
1531 1611 2.579201 CCGGGAGTTGCGTGATCT 59.421 61.111 0.00 0.00 0.00 2.75
1532 1612 1.811266 CCGGGAGTTGCGTGATCTG 60.811 63.158 0.00 0.00 0.00 2.90
1533 1613 1.079819 CGGGAGTTGCGTGATCTGT 60.080 57.895 0.00 0.00 0.00 3.41
1534 1614 0.172578 CGGGAGTTGCGTGATCTGTA 59.827 55.000 0.00 0.00 0.00 2.74
1535 1615 1.799181 CGGGAGTTGCGTGATCTGTAG 60.799 57.143 0.00 0.00 0.00 2.74
1536 1616 1.204941 GGGAGTTGCGTGATCTGTAGT 59.795 52.381 0.00 0.00 0.00 2.73
1537 1617 2.353803 GGGAGTTGCGTGATCTGTAGTT 60.354 50.000 0.00 0.00 0.00 2.24
1538 1618 2.668457 GGAGTTGCGTGATCTGTAGTTG 59.332 50.000 0.00 0.00 0.00 3.16
1539 1619 3.318017 GAGTTGCGTGATCTGTAGTTGT 58.682 45.455 0.00 0.00 0.00 3.32
1540 1620 4.482386 GAGTTGCGTGATCTGTAGTTGTA 58.518 43.478 0.00 0.00 0.00 2.41
1541 1621 4.878439 AGTTGCGTGATCTGTAGTTGTAA 58.122 39.130 0.00 0.00 0.00 2.41
1542 1622 5.294356 AGTTGCGTGATCTGTAGTTGTAAA 58.706 37.500 0.00 0.00 0.00 2.01
1543 1623 5.756347 AGTTGCGTGATCTGTAGTTGTAAAA 59.244 36.000 0.00 0.00 0.00 1.52
1544 1624 5.585500 TGCGTGATCTGTAGTTGTAAAAC 57.415 39.130 0.00 0.00 0.00 2.43
1545 1625 5.294356 TGCGTGATCTGTAGTTGTAAAACT 58.706 37.500 3.25 3.25 36.82 2.66
1546 1626 5.176774 TGCGTGATCTGTAGTTGTAAAACTG 59.823 40.000 8.66 0.00 34.37 3.16
1547 1627 5.404366 GCGTGATCTGTAGTTGTAAAACTGA 59.596 40.000 8.66 0.00 34.37 3.41
1548 1628 6.073980 GCGTGATCTGTAGTTGTAAAACTGAA 60.074 38.462 8.66 0.00 34.37 3.02
1549 1629 7.360101 GCGTGATCTGTAGTTGTAAAACTGAAT 60.360 37.037 8.66 0.00 34.37 2.57
1550 1630 8.162880 CGTGATCTGTAGTTGTAAAACTGAATC 58.837 37.037 8.66 6.58 34.37 2.52
1551 1631 9.209175 GTGATCTGTAGTTGTAAAACTGAATCT 57.791 33.333 8.66 0.00 34.37 2.40
1552 1632 9.208022 TGATCTGTAGTTGTAAAACTGAATCTG 57.792 33.333 8.66 1.86 34.37 2.90
1553 1633 9.209175 GATCTGTAGTTGTAAAACTGAATCTGT 57.791 33.333 8.66 0.00 34.37 3.41
1560 1640 8.403236 AGTTGTAAAACTGAATCTGTAAACACC 58.597 33.333 0.00 0.00 0.00 4.16
1561 1641 6.950545 TGTAAAACTGAATCTGTAAACACCG 58.049 36.000 0.00 0.00 0.00 4.94
1562 1642 4.483476 AAACTGAATCTGTAAACACCGC 57.517 40.909 0.00 0.00 0.00 5.68
1563 1643 3.402628 ACTGAATCTGTAAACACCGCT 57.597 42.857 0.00 0.00 0.00 5.52
1564 1644 3.326747 ACTGAATCTGTAAACACCGCTC 58.673 45.455 0.00 0.00 0.00 5.03
1565 1645 3.244078 ACTGAATCTGTAAACACCGCTCA 60.244 43.478 0.00 0.00 0.00 4.26
1566 1646 3.064207 TGAATCTGTAAACACCGCTCAC 58.936 45.455 0.00 0.00 0.00 3.51
1567 1647 2.831685 ATCTGTAAACACCGCTCACA 57.168 45.000 0.00 0.00 0.00 3.58
1568 1648 2.605837 TCTGTAAACACCGCTCACAA 57.394 45.000 0.00 0.00 0.00 3.33
1569 1649 2.907634 TCTGTAAACACCGCTCACAAA 58.092 42.857 0.00 0.00 0.00 2.83
1570 1650 2.610374 TCTGTAAACACCGCTCACAAAC 59.390 45.455 0.00 0.00 0.00 2.93
1571 1651 2.612212 CTGTAAACACCGCTCACAAACT 59.388 45.455 0.00 0.00 0.00 2.66
1572 1652 2.610374 TGTAAACACCGCTCACAAACTC 59.390 45.455 0.00 0.00 0.00 3.01
1573 1653 1.021968 AAACACCGCTCACAAACTCC 58.978 50.000 0.00 0.00 0.00 3.85
1574 1654 0.818040 AACACCGCTCACAAACTCCC 60.818 55.000 0.00 0.00 0.00 4.30
1575 1655 1.071471 CACCGCTCACAAACTCCCT 59.929 57.895 0.00 0.00 0.00 4.20
1576 1656 0.951040 CACCGCTCACAAACTCCCTC 60.951 60.000 0.00 0.00 0.00 4.30
1577 1657 1.376037 CCGCTCACAAACTCCCTCC 60.376 63.158 0.00 0.00 0.00 4.30
1578 1658 1.376037 CGCTCACAAACTCCCTCCC 60.376 63.158 0.00 0.00 0.00 4.30
1579 1659 1.002011 GCTCACAAACTCCCTCCCC 60.002 63.158 0.00 0.00 0.00 4.81
1580 1660 1.779061 GCTCACAAACTCCCTCCCCA 61.779 60.000 0.00 0.00 0.00 4.96
1581 1661 0.326264 CTCACAAACTCCCTCCCCAG 59.674 60.000 0.00 0.00 0.00 4.45
1582 1662 0.401395 TCACAAACTCCCTCCCCAGT 60.401 55.000 0.00 0.00 0.00 4.00
1583 1663 0.036875 CACAAACTCCCTCCCCAGTC 59.963 60.000 0.00 0.00 0.00 3.51
1584 1664 1.134438 ACAAACTCCCTCCCCAGTCC 61.134 60.000 0.00 0.00 0.00 3.85
1585 1665 1.541620 AAACTCCCTCCCCAGTCCC 60.542 63.158 0.00 0.00 0.00 4.46
1586 1666 3.925914 AACTCCCTCCCCAGTCCCG 62.926 68.421 0.00 0.00 0.00 5.14
1591 1671 3.072468 CTCCCCAGTCCCGCGTTA 61.072 66.667 4.92 0.00 0.00 3.18
1592 1672 2.364579 TCCCCAGTCCCGCGTTAT 60.365 61.111 4.92 0.00 0.00 1.89
1593 1673 2.108362 CCCCAGTCCCGCGTTATC 59.892 66.667 4.92 0.00 0.00 1.75
1594 1674 2.108362 CCCAGTCCCGCGTTATCC 59.892 66.667 4.92 0.00 0.00 2.59
1595 1675 2.108362 CCAGTCCCGCGTTATCCC 59.892 66.667 4.92 0.00 0.00 3.85
1596 1676 2.108362 CAGTCCCGCGTTATCCCC 59.892 66.667 4.92 0.00 0.00 4.81
1703 1783 4.516195 GTCGGGCCGCTCCTTCTC 62.516 72.222 23.83 0.00 34.39 2.87
1740 1820 1.913951 TTGGAGATGCAGCGGACCAT 61.914 55.000 16.26 0.00 0.00 3.55
1771 1851 2.264794 CCGGTGGCTGTACTGTCC 59.735 66.667 1.60 4.40 0.00 4.02
1838 1918 2.124695 GCGGGCTTGGGTAGGAAG 60.125 66.667 0.00 0.00 0.00 3.46
1847 1927 0.616679 TGGGTAGGAAGAAGGTCCCG 60.617 60.000 0.00 0.00 38.59 5.14
1881 1961 3.513768 TTGCAGCGGCGAGTTCTCA 62.514 57.895 12.98 0.00 45.35 3.27
1901 1981 1.299926 GCGTCGTTGTGGAGTCTGT 60.300 57.895 0.00 0.00 0.00 3.41
2081 2161 2.507471 GAGTGGTCAAATCCCCAGATCT 59.493 50.000 0.00 0.00 0.00 2.75
2099 2179 2.510238 GAGCCGATGCAAGCTCGT 60.510 61.111 17.60 0.00 45.44 4.18
2175 2255 3.708236 TCCTAGTCTTTAGGCTGGGAT 57.292 47.619 11.88 0.00 37.44 3.85
2216 2296 3.483869 GAGGGCGAGGGGCTTCAT 61.484 66.667 0.00 0.00 43.29 2.57
2266 2346 2.357637 TGGTTTTTCTCCAGCAGTTTCG 59.642 45.455 0.00 0.00 0.00 3.46
2280 2360 1.662446 TTTCGACGGCGGAAGACAC 60.662 57.895 12.58 0.00 41.50 3.67
2308 2388 0.530744 AGCATCTTCGGCTTGTACGA 59.469 50.000 0.00 0.00 38.81 3.43
2346 2426 8.856153 ACCAACTTGTTATTTTGTTCCTTTTT 57.144 26.923 0.00 0.00 0.00 1.94
2347 2427 8.726068 ACCAACTTGTTATTTTGTTCCTTTTTG 58.274 29.630 0.00 0.00 0.00 2.44
2348 2428 8.940952 CCAACTTGTTATTTTGTTCCTTTTTGA 58.059 29.630 0.00 0.00 0.00 2.69
2349 2429 9.971744 CAACTTGTTATTTTGTTCCTTTTTGAG 57.028 29.630 0.00 0.00 0.00 3.02
2350 2430 9.719355 AACTTGTTATTTTGTTCCTTTTTGAGT 57.281 25.926 0.00 0.00 0.00 3.41
2351 2431 9.719355 ACTTGTTATTTTGTTCCTTTTTGAGTT 57.281 25.926 0.00 0.00 0.00 3.01
2360 2440 9.602568 TTTGTTCCTTTTTGAGTTAAAATACCC 57.397 29.630 0.00 0.00 38.03 3.69
2361 2441 8.541899 TGTTCCTTTTTGAGTTAAAATACCCT 57.458 30.769 0.00 0.00 38.03 4.34
2362 2442 8.417884 TGTTCCTTTTTGAGTTAAAATACCCTG 58.582 33.333 0.00 0.00 38.03 4.45
2363 2443 7.533289 TCCTTTTTGAGTTAAAATACCCTGG 57.467 36.000 0.00 0.00 38.03 4.45
2364 2444 7.299134 TCCTTTTTGAGTTAAAATACCCTGGA 58.701 34.615 0.00 0.00 38.03 3.86
2365 2445 7.450323 TCCTTTTTGAGTTAAAATACCCTGGAG 59.550 37.037 0.00 0.00 38.03 3.86
2366 2446 7.309805 CCTTTTTGAGTTAAAATACCCTGGAGG 60.310 40.741 0.00 0.00 38.03 4.30
2367 2447 6.616577 TTTTGAGTTAAAATACCCTGGAGGT 58.383 36.000 0.00 0.00 41.81 3.85
2368 2448 7.070629 TTTTGAGTTAAAATACCCTGGAGGTT 58.929 34.615 0.00 0.00 40.48 3.50
2369 2449 7.231925 TTTTGAGTTAAAATACCCTGGAGGTTC 59.768 37.037 0.00 0.00 40.48 3.62
2376 2456 2.778899 CCCTGGAGGTTCCTCAACT 58.221 57.895 18.83 0.00 37.46 3.16
2377 2457 1.068121 CCCTGGAGGTTCCTCAACTT 58.932 55.000 18.83 0.00 37.46 2.66
2378 2458 1.271597 CCCTGGAGGTTCCTCAACTTG 60.272 57.143 18.83 5.40 37.46 3.16
2379 2459 1.421646 CCTGGAGGTTCCTCAACTTGT 59.578 52.381 18.83 0.00 37.46 3.16
2380 2460 2.551071 CCTGGAGGTTCCTCAACTTGTC 60.551 54.545 18.83 2.42 37.46 3.18
2381 2461 2.370189 CTGGAGGTTCCTCAACTTGTCT 59.630 50.000 18.83 0.00 37.46 3.41
2382 2462 2.777692 TGGAGGTTCCTCAACTTGTCTT 59.222 45.455 18.83 0.00 37.46 3.01
2383 2463 3.142174 GGAGGTTCCTCAACTTGTCTTG 58.858 50.000 18.83 0.00 34.96 3.02
2384 2464 3.181454 GGAGGTTCCTCAACTTGTCTTGA 60.181 47.826 18.83 0.00 34.96 3.02
2385 2465 4.061596 GAGGTTCCTCAACTTGTCTTGAG 58.938 47.826 13.31 2.49 44.72 3.02
2386 2466 2.550180 GGTTCCTCAACTTGTCTTGAGC 59.450 50.000 3.78 0.00 44.05 4.26
2387 2467 2.154854 TCCTCAACTTGTCTTGAGCG 57.845 50.000 3.78 0.00 44.05 5.03
2388 2468 1.686587 TCCTCAACTTGTCTTGAGCGA 59.313 47.619 3.78 1.25 44.05 4.93
2389 2469 2.300152 TCCTCAACTTGTCTTGAGCGAT 59.700 45.455 3.78 0.00 44.05 4.58
2390 2470 2.670414 CCTCAACTTGTCTTGAGCGATC 59.330 50.000 0.00 0.00 44.05 3.69
2391 2471 3.320626 CTCAACTTGTCTTGAGCGATCA 58.679 45.455 0.00 0.00 40.51 2.92
2392 2472 3.320626 TCAACTTGTCTTGAGCGATCAG 58.679 45.455 2.57 0.00 0.00 2.90
2393 2473 3.062763 CAACTTGTCTTGAGCGATCAGT 58.937 45.455 2.57 0.00 0.00 3.41
2394 2474 3.393089 ACTTGTCTTGAGCGATCAGTT 57.607 42.857 2.57 0.00 0.00 3.16
2395 2475 3.733337 ACTTGTCTTGAGCGATCAGTTT 58.267 40.909 2.57 0.00 0.00 2.66
2396 2476 4.883083 ACTTGTCTTGAGCGATCAGTTTA 58.117 39.130 2.57 0.00 0.00 2.01
2397 2477 4.926238 ACTTGTCTTGAGCGATCAGTTTAG 59.074 41.667 2.57 0.00 0.00 1.85
2398 2478 4.521130 TGTCTTGAGCGATCAGTTTAGT 57.479 40.909 2.57 0.00 0.00 2.24
2399 2479 4.237724 TGTCTTGAGCGATCAGTTTAGTG 58.762 43.478 2.57 0.00 0.00 2.74
2400 2480 4.022329 TGTCTTGAGCGATCAGTTTAGTGA 60.022 41.667 2.57 0.00 0.00 3.41
2401 2481 4.324936 GTCTTGAGCGATCAGTTTAGTGAC 59.675 45.833 2.57 2.11 0.00 3.67
2402 2482 4.218635 TCTTGAGCGATCAGTTTAGTGACT 59.781 41.667 2.57 0.00 0.00 3.41
2403 2483 5.414765 TCTTGAGCGATCAGTTTAGTGACTA 59.585 40.000 2.57 0.00 0.00 2.59
2404 2484 5.638596 TGAGCGATCAGTTTAGTGACTAA 57.361 39.130 0.00 0.00 0.00 2.24
2405 2485 6.020971 TGAGCGATCAGTTTAGTGACTAAA 57.979 37.500 13.39 13.39 34.12 1.85
2406 2486 6.093404 TGAGCGATCAGTTTAGTGACTAAAG 58.907 40.000 17.37 7.84 36.73 1.85
2407 2487 6.026947 AGCGATCAGTTTAGTGACTAAAGT 57.973 37.500 17.37 17.36 39.34 2.66
2408 2488 6.456501 AGCGATCAGTTTAGTGACTAAAGTT 58.543 36.000 19.79 9.22 37.45 2.66
2409 2489 6.366332 AGCGATCAGTTTAGTGACTAAAGTTG 59.634 38.462 19.79 18.25 37.45 3.16
2410 2490 6.145696 GCGATCAGTTTAGTGACTAAAGTTGT 59.854 38.462 19.79 12.67 37.45 3.32
2411 2491 7.327761 GCGATCAGTTTAGTGACTAAAGTTGTA 59.672 37.037 19.79 10.83 37.45 2.41
2412 2492 9.188588 CGATCAGTTTAGTGACTAAAGTTGTAA 57.811 33.333 19.79 8.83 37.45 2.41
2430 2510 9.471084 AAGTTGTAAAATACATAAAACTGGTGC 57.529 29.630 0.00 0.00 38.68 5.01
2431 2511 8.856103 AGTTGTAAAATACATAAAACTGGTGCT 58.144 29.630 0.00 0.00 38.68 4.40
2432 2512 9.124807 GTTGTAAAATACATAAAACTGGTGCTC 57.875 33.333 0.00 0.00 38.68 4.26
2433 2513 7.523219 TGTAAAATACATAAAACTGGTGCTCG 58.477 34.615 0.00 0.00 32.89 5.03
2434 2514 6.811253 AAAATACATAAAACTGGTGCTCGA 57.189 33.333 0.00 0.00 0.00 4.04
2435 2515 6.811253 AAATACATAAAACTGGTGCTCGAA 57.189 33.333 0.00 0.00 0.00 3.71
2436 2516 5.796350 ATACATAAAACTGGTGCTCGAAC 57.204 39.130 0.00 0.00 0.00 3.95
2437 2517 3.740115 ACATAAAACTGGTGCTCGAACT 58.260 40.909 0.00 0.00 0.00 3.01
2438 2518 4.134563 ACATAAAACTGGTGCTCGAACTT 58.865 39.130 0.00 0.00 0.00 2.66
2439 2519 4.024048 ACATAAAACTGGTGCTCGAACTTG 60.024 41.667 0.00 0.00 0.00 3.16
2440 2520 2.038387 AAACTGGTGCTCGAACTTGT 57.962 45.000 0.00 0.00 0.00 3.16
2441 2521 1.583054 AACTGGTGCTCGAACTTGTC 58.417 50.000 0.00 0.00 0.00 3.18
2442 2522 0.464036 ACTGGTGCTCGAACTTGTCA 59.536 50.000 0.00 0.00 0.00 3.58
2443 2523 1.143305 CTGGTGCTCGAACTTGTCAG 58.857 55.000 0.00 0.00 0.00 3.51
2444 2524 0.249868 TGGTGCTCGAACTTGTCAGG 60.250 55.000 0.00 0.00 0.00 3.86
2445 2525 1.569479 GGTGCTCGAACTTGTCAGGC 61.569 60.000 0.00 0.00 0.00 4.85
2446 2526 1.301716 TGCTCGAACTTGTCAGGCC 60.302 57.895 0.00 0.00 0.00 5.19
2447 2527 2.383527 GCTCGAACTTGTCAGGCCG 61.384 63.158 0.00 0.00 0.00 6.13
2448 2528 1.006102 CTCGAACTTGTCAGGCCGT 60.006 57.895 0.00 0.00 0.00 5.68
2449 2529 1.284982 CTCGAACTTGTCAGGCCGTG 61.285 60.000 0.00 0.00 0.00 4.94
2450 2530 1.594293 CGAACTTGTCAGGCCGTGT 60.594 57.895 0.00 0.00 0.00 4.49
2451 2531 0.319211 CGAACTTGTCAGGCCGTGTA 60.319 55.000 0.00 0.00 0.00 2.90
2452 2532 1.870580 CGAACTTGTCAGGCCGTGTAA 60.871 52.381 0.00 0.00 0.00 2.41
2453 2533 2.215196 GAACTTGTCAGGCCGTGTAAA 58.785 47.619 0.00 0.00 0.00 2.01
2454 2534 2.561478 ACTTGTCAGGCCGTGTAAAT 57.439 45.000 0.00 0.00 0.00 1.40
2455 2535 3.688694 ACTTGTCAGGCCGTGTAAATA 57.311 42.857 0.00 0.00 0.00 1.40
2456 2536 3.332034 ACTTGTCAGGCCGTGTAAATAC 58.668 45.455 0.00 0.00 0.00 1.89
2457 2537 1.999048 TGTCAGGCCGTGTAAATACG 58.001 50.000 0.00 0.00 43.35 3.06
2458 2538 1.545136 TGTCAGGCCGTGTAAATACGA 59.455 47.619 0.00 0.00 46.46 3.43
2459 2539 2.166870 TGTCAGGCCGTGTAAATACGAT 59.833 45.455 0.00 0.00 46.46 3.73
2460 2540 3.380954 TGTCAGGCCGTGTAAATACGATA 59.619 43.478 0.00 0.00 46.46 2.92
2461 2541 3.732721 GTCAGGCCGTGTAAATACGATAC 59.267 47.826 0.00 0.00 46.46 2.24
2462 2542 3.380954 TCAGGCCGTGTAAATACGATACA 59.619 43.478 0.00 0.00 46.46 2.29
2463 2543 4.038282 TCAGGCCGTGTAAATACGATACAT 59.962 41.667 0.00 0.00 46.46 2.29
2464 2544 4.384846 CAGGCCGTGTAAATACGATACATC 59.615 45.833 0.00 0.00 46.46 3.06
2465 2545 3.676646 GGCCGTGTAAATACGATACATCC 59.323 47.826 0.49 0.00 46.46 3.51
2466 2546 4.300803 GCCGTGTAAATACGATACATCCA 58.699 43.478 0.49 0.00 46.46 3.41
2467 2547 4.927425 GCCGTGTAAATACGATACATCCAT 59.073 41.667 0.49 0.00 46.46 3.41
2468 2548 5.407387 GCCGTGTAAATACGATACATCCATT 59.593 40.000 0.49 0.00 46.46 3.16
2469 2549 6.400727 GCCGTGTAAATACGATACATCCATTC 60.401 42.308 0.49 0.00 46.46 2.67
2470 2550 6.643360 CCGTGTAAATACGATACATCCATTCA 59.357 38.462 0.49 0.00 46.46 2.57
2471 2551 7.330946 CCGTGTAAATACGATACATCCATTCAT 59.669 37.037 0.49 0.00 46.46 2.57
2472 2552 9.349145 CGTGTAAATACGATACATCCATTCATA 57.651 33.333 0.00 0.00 46.46 2.15
2477 2557 9.605275 AAATACGATACATCCATTCATATCAGG 57.395 33.333 0.00 0.00 0.00 3.86
2478 2558 6.857437 ACGATACATCCATTCATATCAGGA 57.143 37.500 0.00 0.00 34.12 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.186409 ACAGTAAGATTAAAGCCACCGTCTA 59.814 40.000 0.00 0.00 0.00 2.59
1 2 4.020485 ACAGTAAGATTAAAGCCACCGTCT 60.020 41.667 0.00 0.00 0.00 4.18
2 3 4.251268 ACAGTAAGATTAAAGCCACCGTC 58.749 43.478 0.00 0.00 0.00 4.79
3 4 4.281898 ACAGTAAGATTAAAGCCACCGT 57.718 40.909 0.00 0.00 0.00 4.83
4 5 4.454504 ACAACAGTAAGATTAAAGCCACCG 59.545 41.667 0.00 0.00 0.00 4.94
5 6 5.959618 ACAACAGTAAGATTAAAGCCACC 57.040 39.130 0.00 0.00 0.00 4.61
6 7 8.175716 GTCATACAACAGTAAGATTAAAGCCAC 58.824 37.037 0.00 0.00 0.00 5.01
7 8 8.100791 AGTCATACAACAGTAAGATTAAAGCCA 58.899 33.333 0.00 0.00 0.00 4.75
8 9 8.494016 AGTCATACAACAGTAAGATTAAAGCC 57.506 34.615 0.00 0.00 0.00 4.35
15 16 9.436957 CCTTACAAAGTCATACAACAGTAAGAT 57.563 33.333 0.00 0.00 39.45 2.40
16 17 8.426489 ACCTTACAAAGTCATACAACAGTAAGA 58.574 33.333 0.00 0.00 39.45 2.10
17 18 8.603242 ACCTTACAAAGTCATACAACAGTAAG 57.397 34.615 0.00 0.00 37.80 2.34
18 19 8.426489 AGACCTTACAAAGTCATACAACAGTAA 58.574 33.333 0.00 0.00 0.00 2.24
19 20 7.959175 AGACCTTACAAAGTCATACAACAGTA 58.041 34.615 0.00 0.00 0.00 2.74
20 21 6.827727 AGACCTTACAAAGTCATACAACAGT 58.172 36.000 0.00 0.00 0.00 3.55
21 22 7.226720 ACAAGACCTTACAAAGTCATACAACAG 59.773 37.037 0.00 0.00 0.00 3.16
22 23 7.011950 CACAAGACCTTACAAAGTCATACAACA 59.988 37.037 0.00 0.00 0.00 3.33
23 24 7.012044 ACACAAGACCTTACAAAGTCATACAAC 59.988 37.037 0.00 0.00 0.00 3.32
24 25 7.011950 CACACAAGACCTTACAAAGTCATACAA 59.988 37.037 0.00 0.00 0.00 2.41
25 26 6.481976 CACACAAGACCTTACAAAGTCATACA 59.518 38.462 0.00 0.00 0.00 2.29
26 27 6.704493 TCACACAAGACCTTACAAAGTCATAC 59.296 38.462 0.00 0.00 0.00 2.39
27 28 6.822442 TCACACAAGACCTTACAAAGTCATA 58.178 36.000 0.00 0.00 0.00 2.15
28 29 5.680619 TCACACAAGACCTTACAAAGTCAT 58.319 37.500 0.00 0.00 0.00 3.06
29 30 5.092554 TCACACAAGACCTTACAAAGTCA 57.907 39.130 0.00 0.00 0.00 3.41
30 31 6.619801 ATTCACACAAGACCTTACAAAGTC 57.380 37.500 0.00 0.00 0.00 3.01
31 32 8.691661 ATTATTCACACAAGACCTTACAAAGT 57.308 30.769 0.00 0.00 0.00 2.66
44 45 9.853555 CAGCCACTTTATTAATTATTCACACAA 57.146 29.630 0.00 0.00 0.00 3.33
45 46 7.973388 GCAGCCACTTTATTAATTATTCACACA 59.027 33.333 0.00 0.00 0.00 3.72
46 47 7.973388 TGCAGCCACTTTATTAATTATTCACAC 59.027 33.333 0.00 0.00 0.00 3.82
47 48 8.060931 TGCAGCCACTTTATTAATTATTCACA 57.939 30.769 0.00 0.00 0.00 3.58
48 49 8.971321 CATGCAGCCACTTTATTAATTATTCAC 58.029 33.333 0.00 0.00 0.00 3.18
49 50 7.652909 GCATGCAGCCACTTTATTAATTATTCA 59.347 33.333 14.21 0.00 37.23 2.57
50 51 7.652909 TGCATGCAGCCACTTTATTAATTATTC 59.347 33.333 18.46 0.00 44.83 1.75
51 52 7.499292 TGCATGCAGCCACTTTATTAATTATT 58.501 30.769 18.46 0.00 44.83 1.40
52 53 7.053316 TGCATGCAGCCACTTTATTAATTAT 57.947 32.000 18.46 0.00 44.83 1.28
53 54 6.462552 TGCATGCAGCCACTTTATTAATTA 57.537 33.333 18.46 0.00 44.83 1.40
54 55 5.341872 TGCATGCAGCCACTTTATTAATT 57.658 34.783 18.46 0.00 44.83 1.40
55 56 5.069383 TGATGCATGCAGCCACTTTATTAAT 59.931 36.000 31.30 6.94 44.83 1.40
56 57 4.401837 TGATGCATGCAGCCACTTTATTAA 59.598 37.500 31.30 7.33 44.83 1.40
57 58 3.952967 TGATGCATGCAGCCACTTTATTA 59.047 39.130 31.30 8.11 44.83 0.98
58 59 2.761767 TGATGCATGCAGCCACTTTATT 59.238 40.909 31.30 8.21 44.83 1.40
59 60 2.380941 TGATGCATGCAGCCACTTTAT 58.619 42.857 31.30 9.02 44.83 1.40
60 61 1.836802 TGATGCATGCAGCCACTTTA 58.163 45.000 31.30 10.43 44.83 1.85
61 62 1.136305 GATGATGCATGCAGCCACTTT 59.864 47.619 31.30 10.63 44.83 2.66
62 63 0.744874 GATGATGCATGCAGCCACTT 59.255 50.000 31.30 14.63 44.83 3.16
63 64 1.107538 GGATGATGCATGCAGCCACT 61.108 55.000 31.30 16.98 44.83 4.00
64 65 1.362717 GGATGATGCATGCAGCCAC 59.637 57.895 31.30 23.41 44.83 5.01
65 66 3.850508 GGATGATGCATGCAGCCA 58.149 55.556 31.30 26.44 44.83 4.75
66 67 3.850508 TGGATGATGCATGCAGCC 58.149 55.556 31.30 24.34 44.83 4.85
76 77 1.600076 GCCGCTGCATCTGGATGAT 60.600 57.895 13.96 0.00 41.20 2.45
77 78 2.203112 GCCGCTGCATCTGGATGA 60.203 61.111 13.96 0.04 41.20 2.92
78 79 3.285215 GGCCGCTGCATCTGGATG 61.285 66.667 1.55 6.24 41.60 3.51
79 80 4.923942 CGGCCGCTGCATCTGGAT 62.924 66.667 14.67 0.00 40.13 3.41
94 95 1.498176 AAAAGGAGGAGGAACCCCGG 61.498 60.000 0.00 0.00 40.05 5.73
95 96 0.035343 GAAAAGGAGGAGGAACCCCG 60.035 60.000 0.00 0.00 40.05 5.73
96 97 1.373536 AGAAAAGGAGGAGGAACCCC 58.626 55.000 0.00 0.00 40.05 4.95
97 98 4.652679 TTTAGAAAAGGAGGAGGAACCC 57.347 45.455 0.00 0.00 40.05 4.11
120 121 9.251440 TGATACTCTATGCTATAACCGGTATTT 57.749 33.333 8.00 0.00 0.00 1.40
121 122 8.818622 TGATACTCTATGCTATAACCGGTATT 57.181 34.615 8.00 0.00 0.00 1.89
190 191 4.708177 TGTTGGAAATATGCTCTAGAGGC 58.292 43.478 21.23 13.48 0.00 4.70
216 217 7.482169 AATCCATACAGGCGATAAAGATAGA 57.518 36.000 0.00 0.00 37.29 1.98
220 221 6.406370 CCATAATCCATACAGGCGATAAAGA 58.594 40.000 0.00 0.00 37.29 2.52
225 226 2.912956 ACCCATAATCCATACAGGCGAT 59.087 45.455 0.00 0.00 37.29 4.58
232 233 5.445964 ACTTTCCACACCCATAATCCATAC 58.554 41.667 0.00 0.00 0.00 2.39
283 284 6.382919 TTCATAAATACCCCTAGTATGCCC 57.617 41.667 0.00 0.00 40.98 5.36
335 337 2.282407 TCACATCGACATGCAATCCAG 58.718 47.619 0.00 0.00 32.57 3.86
339 341 3.252458 CCATCATCACATCGACATGCAAT 59.748 43.478 0.00 0.00 32.57 3.56
438 440 8.586570 TTCAAAAGAAAATGCGTATGTGAATT 57.413 26.923 0.00 0.00 0.00 2.17
538 579 5.163364 GGCCTCACTCAATATCTTCTCAAGA 60.163 44.000 0.00 0.00 42.69 3.02
565 606 9.325198 GCCTGATTTAAAAAGGAAAAGAAAAGA 57.675 29.630 19.53 0.00 32.43 2.52
566 607 9.108284 TGCCTGATTTAAAAAGGAAAAGAAAAG 57.892 29.630 19.53 0.00 32.43 2.27
584 625 5.448654 TGCCATTAGTAGATTTGCCTGATT 58.551 37.500 0.00 0.00 0.00 2.57
626 667 0.676736 GGACATGTTCGCCCCAAAAA 59.323 50.000 0.00 0.00 0.00 1.94
627 668 0.468214 TGGACATGTTCGCCCCAAAA 60.468 50.000 0.00 0.00 0.00 2.44
721 762 4.002906 GACAAGTCCATGAAGGTGTGTA 57.997 45.455 0.00 0.00 39.02 2.90
756 797 3.952508 ATGCCAGTGGACCGCACA 61.953 61.111 15.20 0.00 34.87 4.57
758 799 3.899981 GACATGCCAGTGGACCGCA 62.900 63.158 15.20 3.40 36.84 5.69
785 826 1.495579 AAGGTGATGGCTCCTGCAGT 61.496 55.000 13.81 0.00 41.91 4.40
834 908 5.047306 TGTGAGTTAAAGAGGACGTGATGAT 60.047 40.000 0.00 0.00 0.00 2.45
845 919 6.662414 TGTTGTGACTTGTGAGTTAAAGAG 57.338 37.500 0.00 0.00 35.88 2.85
852 926 2.671396 GTCGTTGTTGTGACTTGTGAGT 59.329 45.455 0.00 0.00 39.32 3.41
919 993 1.067250 TGACTTTGCTTTTGCCGGC 59.933 52.632 22.73 22.73 46.87 6.13
925 999 1.134175 CGGTGGTGTGACTTTGCTTTT 59.866 47.619 0.00 0.00 0.00 2.27
944 1018 3.417275 CTAGGCTGCCTCGGTGTCG 62.417 68.421 27.16 2.32 34.61 4.35
945 1019 2.496817 CTAGGCTGCCTCGGTGTC 59.503 66.667 27.16 0.00 34.61 3.67
946 1020 3.775654 GCTAGGCTGCCTCGGTGT 61.776 66.667 27.16 2.17 34.61 4.16
960 1034 1.663388 CGTGCGTGAAGTGTGGCTA 60.663 57.895 0.00 0.00 0.00 3.93
962 1036 4.666532 GCGTGCGTGAAGTGTGGC 62.667 66.667 0.00 0.00 0.00 5.01
993 1067 3.857854 GGATGCTGCGAGCGTGTG 61.858 66.667 7.47 0.00 46.26 3.82
998 1072 1.882167 GTCTCTGGATGCTGCGAGC 60.882 63.158 0.00 1.70 42.82 5.03
1010 1084 0.039074 ACGTCTCGCCTTTGTCTCTG 60.039 55.000 0.00 0.00 0.00 3.35
1018 1092 2.569134 GAGAGCACGTCTCGCCTT 59.431 61.111 8.66 0.00 46.44 4.35
1037 1111 1.466024 CGTCTCTACTCTGGTCGCAAC 60.466 57.143 0.00 0.00 0.00 4.17
1045 1119 1.297012 GCGCGACGTCTCTACTCTG 60.297 63.158 12.10 0.00 0.00 3.35
1074 1148 4.293648 CACACCTCCACGGCGACA 62.294 66.667 16.62 0.00 35.61 4.35
1080 1154 2.047844 CAGCTCCACACCTCCACG 60.048 66.667 0.00 0.00 0.00 4.94
1116 1196 0.988832 AGCAGGTTAAACCCCATCGA 59.011 50.000 0.00 0.00 39.75 3.59
1202 1282 2.749441 GGCAGCCAGAGGTTGAGC 60.749 66.667 6.55 0.00 35.94 4.26
1388 1468 1.426816 CGCTCTGCTGCATGTCGAAT 61.427 55.000 1.31 0.00 0.00 3.34
1430 1510 4.749310 AGCACTGGAAGCGGCGAG 62.749 66.667 12.98 0.00 41.80 5.03
1433 1513 3.730761 CACAGCACTGGAAGCGGC 61.731 66.667 2.21 0.00 37.60 6.53
1434 1514 3.052082 CCACAGCACTGGAAGCGG 61.052 66.667 2.21 0.00 37.60 5.52
1435 1515 3.730761 GCCACAGCACTGGAAGCG 61.731 66.667 3.88 0.00 37.60 4.68
1436 1516 0.606401 TAAGCCACAGCACTGGAAGC 60.606 55.000 3.88 2.00 43.56 3.86
1437 1517 1.160137 GTAAGCCACAGCACTGGAAG 58.840 55.000 3.88 0.00 43.56 3.46
1438 1518 0.602638 CGTAAGCCACAGCACTGGAA 60.603 55.000 3.88 0.00 43.56 3.53
1439 1519 1.005037 CGTAAGCCACAGCACTGGA 60.005 57.895 3.88 0.00 43.56 3.86
1440 1520 1.005037 TCGTAAGCCACAGCACTGG 60.005 57.895 2.21 0.00 43.56 4.00
1441 1521 0.319900 ACTCGTAAGCCACAGCACTG 60.320 55.000 0.00 0.00 43.56 3.66
1442 1522 0.393077 AACTCGTAAGCCACAGCACT 59.607 50.000 0.00 0.00 43.56 4.40
1443 1523 1.993370 CTAACTCGTAAGCCACAGCAC 59.007 52.381 0.00 0.00 43.56 4.40
1444 1524 1.067142 CCTAACTCGTAAGCCACAGCA 60.067 52.381 0.00 0.00 43.56 4.41
1445 1525 1.203994 TCCTAACTCGTAAGCCACAGC 59.796 52.381 0.00 0.00 40.32 4.40
1446 1526 2.731341 CGTCCTAACTCGTAAGCCACAG 60.731 54.545 0.00 0.00 37.18 3.66
1447 1527 1.200716 CGTCCTAACTCGTAAGCCACA 59.799 52.381 0.00 0.00 37.18 4.17
1448 1528 1.200948 ACGTCCTAACTCGTAAGCCAC 59.799 52.381 0.00 0.00 38.52 5.01
1449 1529 1.538047 ACGTCCTAACTCGTAAGCCA 58.462 50.000 0.00 0.00 38.52 4.75
1450 1530 2.257034 CAACGTCCTAACTCGTAAGCC 58.743 52.381 0.00 0.00 39.39 4.35
1451 1531 2.660236 CACAACGTCCTAACTCGTAAGC 59.340 50.000 0.00 0.00 39.39 3.09
1452 1532 3.893720 ACACAACGTCCTAACTCGTAAG 58.106 45.455 0.00 0.00 39.39 2.34
1453 1533 3.988379 ACACAACGTCCTAACTCGTAA 57.012 42.857 0.00 0.00 39.39 3.18
1454 1534 3.988379 AACACAACGTCCTAACTCGTA 57.012 42.857 0.00 0.00 39.39 3.43
1455 1535 2.877043 AACACAACGTCCTAACTCGT 57.123 45.000 0.00 0.00 42.12 4.18
1456 1536 3.378339 AGAAACACAACGTCCTAACTCG 58.622 45.455 0.00 0.00 0.00 4.18
1457 1537 3.424529 CGAGAAACACAACGTCCTAACTC 59.575 47.826 0.00 0.00 0.00 3.01
1458 1538 3.181483 ACGAGAAACACAACGTCCTAACT 60.181 43.478 0.00 0.00 33.80 2.24
1459 1539 3.118542 ACGAGAAACACAACGTCCTAAC 58.881 45.455 0.00 0.00 33.80 2.34
1460 1540 3.441496 ACGAGAAACACAACGTCCTAA 57.559 42.857 0.00 0.00 33.80 2.69
1461 1541 3.441496 AACGAGAAACACAACGTCCTA 57.559 42.857 0.00 0.00 38.00 2.94
1462 1542 2.304751 AACGAGAAACACAACGTCCT 57.695 45.000 0.00 0.00 38.00 3.85
1463 1543 2.094734 ACAAACGAGAAACACAACGTCC 59.905 45.455 0.00 0.00 38.00 4.79
1464 1544 3.378959 ACAAACGAGAAACACAACGTC 57.621 42.857 0.00 0.00 38.00 4.34
1465 1545 3.434299 AGAACAAACGAGAAACACAACGT 59.566 39.130 0.00 0.00 40.64 3.99
1466 1546 3.998522 AGAACAAACGAGAAACACAACG 58.001 40.909 0.00 0.00 0.00 4.10
1467 1547 6.413818 CCAATAGAACAAACGAGAAACACAAC 59.586 38.462 0.00 0.00 0.00 3.32
1468 1548 6.094325 ACCAATAGAACAAACGAGAAACACAA 59.906 34.615 0.00 0.00 0.00 3.33
1469 1549 5.587043 ACCAATAGAACAAACGAGAAACACA 59.413 36.000 0.00 0.00 0.00 3.72
1470 1550 6.056428 ACCAATAGAACAAACGAGAAACAC 57.944 37.500 0.00 0.00 0.00 3.32
1471 1551 6.238538 GGAACCAATAGAACAAACGAGAAACA 60.239 38.462 0.00 0.00 0.00 2.83
1472 1552 6.017357 AGGAACCAATAGAACAAACGAGAAAC 60.017 38.462 0.00 0.00 0.00 2.78
1473 1553 6.059484 AGGAACCAATAGAACAAACGAGAAA 58.941 36.000 0.00 0.00 0.00 2.52
1474 1554 5.617252 AGGAACCAATAGAACAAACGAGAA 58.383 37.500 0.00 0.00 0.00 2.87
1475 1555 5.223449 AGGAACCAATAGAACAAACGAGA 57.777 39.130 0.00 0.00 0.00 4.04
1476 1556 5.689819 CAAGGAACCAATAGAACAAACGAG 58.310 41.667 0.00 0.00 0.00 4.18
1477 1557 4.023536 GCAAGGAACCAATAGAACAAACGA 60.024 41.667 0.00 0.00 0.00 3.85
1478 1558 4.023193 AGCAAGGAACCAATAGAACAAACG 60.023 41.667 0.00 0.00 0.00 3.60
1479 1559 5.009610 TGAGCAAGGAACCAATAGAACAAAC 59.990 40.000 0.00 0.00 0.00 2.93
1480 1560 5.136828 TGAGCAAGGAACCAATAGAACAAA 58.863 37.500 0.00 0.00 0.00 2.83
1481 1561 4.724399 TGAGCAAGGAACCAATAGAACAA 58.276 39.130 0.00 0.00 0.00 2.83
1482 1562 4.365514 TGAGCAAGGAACCAATAGAACA 57.634 40.909 0.00 0.00 0.00 3.18
1483 1563 5.904362 AATGAGCAAGGAACCAATAGAAC 57.096 39.130 0.00 0.00 0.00 3.01
1484 1564 8.055181 AGATAAATGAGCAAGGAACCAATAGAA 58.945 33.333 0.00 0.00 0.00 2.10
1485 1565 7.577303 AGATAAATGAGCAAGGAACCAATAGA 58.423 34.615 0.00 0.00 0.00 1.98
1486 1566 7.814264 AGATAAATGAGCAAGGAACCAATAG 57.186 36.000 0.00 0.00 0.00 1.73
1487 1567 8.593945 AAAGATAAATGAGCAAGGAACCAATA 57.406 30.769 0.00 0.00 0.00 1.90
1488 1568 7.364144 GGAAAGATAAATGAGCAAGGAACCAAT 60.364 37.037 0.00 0.00 0.00 3.16
1489 1569 6.071391 GGAAAGATAAATGAGCAAGGAACCAA 60.071 38.462 0.00 0.00 0.00 3.67
1490 1570 5.418840 GGAAAGATAAATGAGCAAGGAACCA 59.581 40.000 0.00 0.00 0.00 3.67
1491 1571 5.163509 GGGAAAGATAAATGAGCAAGGAACC 60.164 44.000 0.00 0.00 0.00 3.62
1492 1572 5.449177 CGGGAAAGATAAATGAGCAAGGAAC 60.449 44.000 0.00 0.00 0.00 3.62
1493 1573 4.640201 CGGGAAAGATAAATGAGCAAGGAA 59.360 41.667 0.00 0.00 0.00 3.36
1494 1574 4.199310 CGGGAAAGATAAATGAGCAAGGA 58.801 43.478 0.00 0.00 0.00 3.36
1495 1575 3.316308 CCGGGAAAGATAAATGAGCAAGG 59.684 47.826 0.00 0.00 0.00 3.61
1496 1576 3.316308 CCCGGGAAAGATAAATGAGCAAG 59.684 47.826 18.48 0.00 0.00 4.01
1497 1577 3.053991 TCCCGGGAAAGATAAATGAGCAA 60.054 43.478 24.50 0.00 0.00 3.91
1498 1578 2.507886 TCCCGGGAAAGATAAATGAGCA 59.492 45.455 24.50 0.00 0.00 4.26
1499 1579 3.142174 CTCCCGGGAAAGATAAATGAGC 58.858 50.000 26.68 0.00 0.00 4.26
1500 1580 4.423625 ACTCCCGGGAAAGATAAATGAG 57.576 45.455 26.68 10.63 0.00 2.90
1501 1581 4.523083 CAACTCCCGGGAAAGATAAATGA 58.477 43.478 26.68 0.00 0.00 2.57
1502 1582 3.066760 GCAACTCCCGGGAAAGATAAATG 59.933 47.826 26.68 12.01 0.00 2.32
1503 1583 3.288092 GCAACTCCCGGGAAAGATAAAT 58.712 45.455 26.68 1.32 0.00 1.40
1504 1584 2.718563 GCAACTCCCGGGAAAGATAAA 58.281 47.619 26.68 0.00 0.00 1.40
1505 1585 1.406341 CGCAACTCCCGGGAAAGATAA 60.406 52.381 26.68 0.00 0.00 1.75
1506 1586 0.177141 CGCAACTCCCGGGAAAGATA 59.823 55.000 26.68 0.00 0.00 1.98
1507 1587 1.078426 CGCAACTCCCGGGAAAGAT 60.078 57.895 26.68 5.55 0.00 2.40
1508 1588 2.345991 CGCAACTCCCGGGAAAGA 59.654 61.111 26.68 1.00 0.00 2.52
1509 1589 2.032071 ACGCAACTCCCGGGAAAG 59.968 61.111 26.68 16.90 0.00 2.62
1510 1590 2.119484 ATCACGCAACTCCCGGGAAA 62.119 55.000 26.68 2.37 41.93 3.13
1511 1591 2.515996 GATCACGCAACTCCCGGGAA 62.516 60.000 26.68 7.26 41.93 3.97
1512 1592 3.000819 ATCACGCAACTCCCGGGA 61.001 61.111 25.06 25.06 42.90 5.14
1513 1593 2.511600 GATCACGCAACTCCCGGG 60.512 66.667 16.85 16.85 0.00 5.73
1514 1594 1.811266 CAGATCACGCAACTCCCGG 60.811 63.158 0.00 0.00 0.00 5.73
1515 1595 0.172578 TACAGATCACGCAACTCCCG 59.827 55.000 0.00 0.00 0.00 5.14
1516 1596 1.204941 ACTACAGATCACGCAACTCCC 59.795 52.381 0.00 0.00 0.00 4.30
1517 1597 2.656560 ACTACAGATCACGCAACTCC 57.343 50.000 0.00 0.00 0.00 3.85
1518 1598 3.318017 ACAACTACAGATCACGCAACTC 58.682 45.455 0.00 0.00 0.00 3.01
1519 1599 3.386768 ACAACTACAGATCACGCAACT 57.613 42.857 0.00 0.00 0.00 3.16
1520 1600 5.585500 TTTACAACTACAGATCACGCAAC 57.415 39.130 0.00 0.00 0.00 4.17
1521 1601 5.756347 AGTTTTACAACTACAGATCACGCAA 59.244 36.000 0.00 0.00 41.81 4.85
1522 1602 5.176774 CAGTTTTACAACTACAGATCACGCA 59.823 40.000 0.00 0.00 41.69 5.24
1523 1603 5.404366 TCAGTTTTACAACTACAGATCACGC 59.596 40.000 0.00 0.00 41.69 5.34
1524 1604 7.402811 TTCAGTTTTACAACTACAGATCACG 57.597 36.000 0.00 0.00 41.69 4.35
1525 1605 9.209175 AGATTCAGTTTTACAACTACAGATCAC 57.791 33.333 0.00 0.00 41.69 3.06
1526 1606 9.208022 CAGATTCAGTTTTACAACTACAGATCA 57.792 33.333 0.00 0.00 41.69 2.92
1527 1607 9.209175 ACAGATTCAGTTTTACAACTACAGATC 57.791 33.333 0.00 0.00 41.69 2.75
1534 1614 8.403236 GGTGTTTACAGATTCAGTTTTACAACT 58.597 33.333 0.00 0.00 44.72 3.16
1535 1615 7.375017 CGGTGTTTACAGATTCAGTTTTACAAC 59.625 37.037 0.00 0.00 0.00 3.32
1536 1616 7.411274 CGGTGTTTACAGATTCAGTTTTACAA 58.589 34.615 0.00 0.00 0.00 2.41
1537 1617 6.512091 GCGGTGTTTACAGATTCAGTTTTACA 60.512 38.462 0.00 0.00 0.00 2.41
1538 1618 5.849604 GCGGTGTTTACAGATTCAGTTTTAC 59.150 40.000 0.00 0.00 0.00 2.01
1539 1619 5.761234 AGCGGTGTTTACAGATTCAGTTTTA 59.239 36.000 0.00 0.00 0.00 1.52
1540 1620 4.578928 AGCGGTGTTTACAGATTCAGTTTT 59.421 37.500 0.00 0.00 0.00 2.43
1541 1621 4.134563 AGCGGTGTTTACAGATTCAGTTT 58.865 39.130 0.00 0.00 0.00 2.66
1542 1622 3.740115 AGCGGTGTTTACAGATTCAGTT 58.260 40.909 0.00 0.00 0.00 3.16
1543 1623 3.244078 TGAGCGGTGTTTACAGATTCAGT 60.244 43.478 0.00 0.00 0.00 3.41
1544 1624 3.123621 GTGAGCGGTGTTTACAGATTCAG 59.876 47.826 0.00 0.00 0.00 3.02
1545 1625 3.064207 GTGAGCGGTGTTTACAGATTCA 58.936 45.455 0.00 0.00 0.00 2.57
1546 1626 3.064207 TGTGAGCGGTGTTTACAGATTC 58.936 45.455 0.00 0.00 0.00 2.52
1547 1627 3.120321 TGTGAGCGGTGTTTACAGATT 57.880 42.857 0.00 0.00 0.00 2.40
1548 1628 2.831685 TGTGAGCGGTGTTTACAGAT 57.168 45.000 0.00 0.00 0.00 2.90
1549 1629 2.605837 TTGTGAGCGGTGTTTACAGA 57.394 45.000 0.00 0.00 0.00 3.41
1550 1630 2.612212 AGTTTGTGAGCGGTGTTTACAG 59.388 45.455 0.00 0.00 0.00 2.74
1551 1631 2.610374 GAGTTTGTGAGCGGTGTTTACA 59.390 45.455 0.00 0.00 0.00 2.41
1552 1632 2.032290 GGAGTTTGTGAGCGGTGTTTAC 60.032 50.000 0.00 0.00 0.00 2.01
1553 1633 2.215196 GGAGTTTGTGAGCGGTGTTTA 58.785 47.619 0.00 0.00 0.00 2.01
1554 1634 1.021968 GGAGTTTGTGAGCGGTGTTT 58.978 50.000 0.00 0.00 0.00 2.83
1555 1635 0.818040 GGGAGTTTGTGAGCGGTGTT 60.818 55.000 0.00 0.00 0.00 3.32
1556 1636 1.227853 GGGAGTTTGTGAGCGGTGT 60.228 57.895 0.00 0.00 0.00 4.16
1557 1637 0.951040 GAGGGAGTTTGTGAGCGGTG 60.951 60.000 0.00 0.00 0.00 4.94
1558 1638 1.371558 GAGGGAGTTTGTGAGCGGT 59.628 57.895 0.00 0.00 0.00 5.68
1559 1639 1.376037 GGAGGGAGTTTGTGAGCGG 60.376 63.158 0.00 0.00 0.00 5.52
1560 1640 1.376037 GGGAGGGAGTTTGTGAGCG 60.376 63.158 0.00 0.00 0.00 5.03
1561 1641 1.002011 GGGGAGGGAGTTTGTGAGC 60.002 63.158 0.00 0.00 0.00 4.26
1562 1642 0.326264 CTGGGGAGGGAGTTTGTGAG 59.674 60.000 0.00 0.00 0.00 3.51
1563 1643 0.401395 ACTGGGGAGGGAGTTTGTGA 60.401 55.000 0.00 0.00 0.00 3.58
1564 1644 0.036875 GACTGGGGAGGGAGTTTGTG 59.963 60.000 0.00 0.00 0.00 3.33
1565 1645 1.134438 GGACTGGGGAGGGAGTTTGT 61.134 60.000 0.00 0.00 0.00 2.83
1566 1646 1.685820 GGACTGGGGAGGGAGTTTG 59.314 63.158 0.00 0.00 0.00 2.93
1567 1647 1.541620 GGGACTGGGGAGGGAGTTT 60.542 63.158 0.00 0.00 0.00 2.66
1568 1648 2.125225 GGGACTGGGGAGGGAGTT 59.875 66.667 0.00 0.00 0.00 3.01
1569 1649 4.400251 CGGGACTGGGGAGGGAGT 62.400 72.222 0.00 0.00 0.00 3.85
1574 1654 2.365095 GATAACGCGGGACTGGGGAG 62.365 65.000 12.47 0.00 0.00 4.30
1575 1655 2.364579 ATAACGCGGGACTGGGGA 60.365 61.111 12.47 0.00 0.00 4.81
1576 1656 2.108362 GATAACGCGGGACTGGGG 59.892 66.667 12.47 0.00 0.00 4.96
1577 1657 2.108362 GGATAACGCGGGACTGGG 59.892 66.667 12.47 0.00 0.00 4.45
1578 1658 2.108362 GGGATAACGCGGGACTGG 59.892 66.667 12.47 0.00 0.00 4.00
1579 1659 2.108362 GGGGATAACGCGGGACTG 59.892 66.667 12.47 0.00 0.00 3.51
1580 1660 2.364579 TGGGGATAACGCGGGACT 60.365 61.111 12.47 0.00 34.15 3.85
1581 1661 2.108362 CTGGGGATAACGCGGGAC 59.892 66.667 12.47 0.00 34.92 4.46
1582 1662 2.042741 TCTGGGGATAACGCGGGA 60.043 61.111 12.47 0.00 38.83 5.14
1583 1663 2.108362 GTCTGGGGATAACGCGGG 59.892 66.667 12.47 0.00 38.83 6.13
1584 1664 1.968050 AAGGTCTGGGGATAACGCGG 61.968 60.000 12.47 0.00 39.63 6.46
1585 1665 0.107848 AAAGGTCTGGGGATAACGCG 60.108 55.000 3.53 3.53 34.15 6.01
1586 1666 1.209747 AGAAAGGTCTGGGGATAACGC 59.790 52.381 0.00 0.00 30.83 4.84
1587 1667 3.197983 AGAAGAAAGGTCTGGGGATAACG 59.802 47.826 0.00 0.00 33.05 3.18
1588 1668 4.384318 GGAGAAGAAAGGTCTGGGGATAAC 60.384 50.000 0.00 0.00 33.05 1.89
1589 1669 3.780850 GGAGAAGAAAGGTCTGGGGATAA 59.219 47.826 0.00 0.00 33.05 1.75
1590 1670 3.014110 AGGAGAAGAAAGGTCTGGGGATA 59.986 47.826 0.00 0.00 33.05 2.59
1591 1671 2.200955 GGAGAAGAAAGGTCTGGGGAT 58.799 52.381 0.00 0.00 33.05 3.85
1592 1672 1.152271 AGGAGAAGAAAGGTCTGGGGA 59.848 52.381 0.00 0.00 33.05 4.81
1593 1673 1.557371 GAGGAGAAGAAAGGTCTGGGG 59.443 57.143 0.00 0.00 33.05 4.96
1594 1674 2.499693 GAGAGGAGAAGAAAGGTCTGGG 59.500 54.545 0.00 0.00 33.05 4.45
1595 1675 2.499693 GGAGAGGAGAAGAAAGGTCTGG 59.500 54.545 0.00 0.00 33.05 3.86
1596 1676 3.169099 TGGAGAGGAGAAGAAAGGTCTG 58.831 50.000 0.00 0.00 33.05 3.51
1771 1851 0.962489 ACTAGCCTACATAGCGCAGG 59.038 55.000 11.47 8.50 34.64 4.85
1881 1961 2.201022 AGACTCCACAACGACGCCT 61.201 57.895 0.00 0.00 0.00 5.52
1901 1981 1.080354 CCTGTACACCTCCCCCTCA 59.920 63.158 0.00 0.00 0.00 3.86
1960 2040 4.688419 CAGCTTTGCCACGCCACG 62.688 66.667 0.00 0.00 0.00 4.94
1961 2041 3.595758 ACAGCTTTGCCACGCCAC 61.596 61.111 0.00 0.00 0.00 5.01
1962 2042 3.594775 CACAGCTTTGCCACGCCA 61.595 61.111 0.00 0.00 0.00 5.69
1963 2043 4.347453 CCACAGCTTTGCCACGCC 62.347 66.667 0.00 0.00 0.00 5.68
1964 2044 4.347453 CCCACAGCTTTGCCACGC 62.347 66.667 0.00 0.00 0.00 5.34
1965 2045 4.347453 GCCCACAGCTTTGCCACG 62.347 66.667 0.00 0.00 38.99 4.94
2059 2139 2.044793 TCTGGGGATTTGACCACTCT 57.955 50.000 0.00 0.00 33.92 3.24
2159 2239 1.589414 AGCATCCCAGCCTAAAGACT 58.411 50.000 0.00 0.00 34.23 3.24
2175 2255 2.033299 GCTTTATTGAGCCGCAATAGCA 59.967 45.455 10.02 0.00 46.88 3.49
2216 2296 0.036732 AGCATGAAAACCAGAGCCGA 59.963 50.000 0.00 0.00 32.21 5.54
2266 2346 2.432628 CCAGTGTCTTCCGCCGTC 60.433 66.667 0.00 0.00 0.00 4.79
2280 2360 2.523507 CGAAGATGCTCAGCGCCAG 61.524 63.158 2.29 0.57 38.05 4.85
2308 2388 3.181454 ACAAGTTGGTCCATCGTCTTCTT 60.181 43.478 7.96 0.00 0.00 2.52
2358 2438 1.068121 AAGTTGAGGAACCTCCAGGG 58.932 55.000 16.85 0.00 42.09 4.45
2359 2439 1.421646 ACAAGTTGAGGAACCTCCAGG 59.578 52.381 16.85 6.12 42.09 4.45
2360 2440 2.370189 AGACAAGTTGAGGAACCTCCAG 59.630 50.000 16.85 6.12 42.09 3.86
2361 2441 2.408565 AGACAAGTTGAGGAACCTCCA 58.591 47.619 16.85 4.57 42.09 3.86
2362 2442 3.142174 CAAGACAAGTTGAGGAACCTCC 58.858 50.000 16.85 4.08 42.09 4.30
2363 2443 4.061596 CTCAAGACAAGTTGAGGAACCTC 58.938 47.826 10.54 13.32 46.64 3.85
2364 2444 4.078639 CTCAAGACAAGTTGAGGAACCT 57.921 45.455 10.54 0.00 46.64 3.50
2371 2451 3.243873 ACTGATCGCTCAAGACAAGTTGA 60.244 43.478 10.54 0.00 35.16 3.18
2372 2452 3.062763 ACTGATCGCTCAAGACAAGTTG 58.937 45.455 0.00 0.00 0.00 3.16
2373 2453 3.393089 ACTGATCGCTCAAGACAAGTT 57.607 42.857 0.00 0.00 0.00 2.66
2374 2454 3.393089 AACTGATCGCTCAAGACAAGT 57.607 42.857 0.00 0.00 0.00 3.16
2375 2455 4.926238 ACTAAACTGATCGCTCAAGACAAG 59.074 41.667 0.00 0.00 0.00 3.16
2376 2456 4.686091 CACTAAACTGATCGCTCAAGACAA 59.314 41.667 0.00 0.00 0.00 3.18
2377 2457 4.022329 TCACTAAACTGATCGCTCAAGACA 60.022 41.667 0.00 0.00 0.00 3.41
2378 2458 4.324936 GTCACTAAACTGATCGCTCAAGAC 59.675 45.833 0.00 0.00 0.00 3.01
2379 2459 4.218635 AGTCACTAAACTGATCGCTCAAGA 59.781 41.667 0.00 0.00 0.00 3.02
2380 2460 4.489810 AGTCACTAAACTGATCGCTCAAG 58.510 43.478 0.00 0.00 0.00 3.02
2381 2461 4.521130 AGTCACTAAACTGATCGCTCAA 57.479 40.909 0.00 0.00 0.00 3.02
2382 2462 5.638596 TTAGTCACTAAACTGATCGCTCA 57.361 39.130 0.00 0.00 0.00 4.26
2383 2463 6.094061 ACTTTAGTCACTAAACTGATCGCTC 58.906 40.000 5.86 0.00 33.19 5.03
2384 2464 6.026947 ACTTTAGTCACTAAACTGATCGCT 57.973 37.500 5.86 0.00 33.19 4.93
2385 2465 6.145696 ACAACTTTAGTCACTAAACTGATCGC 59.854 38.462 16.57 0.00 33.19 4.58
2386 2466 7.639162 ACAACTTTAGTCACTAAACTGATCG 57.361 36.000 16.57 6.19 33.19 3.69
2404 2484 9.471084 GCACCAGTTTTATGTATTTTACAACTT 57.529 29.630 0.00 0.00 42.76 2.66
2405 2485 8.856103 AGCACCAGTTTTATGTATTTTACAACT 58.144 29.630 0.00 0.00 42.76 3.16
2406 2486 9.124807 GAGCACCAGTTTTATGTATTTTACAAC 57.875 33.333 0.00 0.00 42.76 3.32
2407 2487 8.018520 CGAGCACCAGTTTTATGTATTTTACAA 58.981 33.333 0.00 0.00 42.76 2.41
2408 2488 7.388224 TCGAGCACCAGTTTTATGTATTTTACA 59.612 33.333 0.00 0.00 43.80 2.41
2409 2489 7.745015 TCGAGCACCAGTTTTATGTATTTTAC 58.255 34.615 0.00 0.00 0.00 2.01
2410 2490 7.908827 TCGAGCACCAGTTTTATGTATTTTA 57.091 32.000 0.00 0.00 0.00 1.52
2411 2491 6.811253 TCGAGCACCAGTTTTATGTATTTT 57.189 33.333 0.00 0.00 0.00 1.82
2412 2492 6.430000 AGTTCGAGCACCAGTTTTATGTATTT 59.570 34.615 1.01 0.00 0.00 1.40
2413 2493 5.938125 AGTTCGAGCACCAGTTTTATGTATT 59.062 36.000 1.01 0.00 0.00 1.89
2414 2494 5.488341 AGTTCGAGCACCAGTTTTATGTAT 58.512 37.500 1.01 0.00 0.00 2.29
2415 2495 4.890088 AGTTCGAGCACCAGTTTTATGTA 58.110 39.130 1.01 0.00 0.00 2.29
2416 2496 3.740115 AGTTCGAGCACCAGTTTTATGT 58.260 40.909 1.01 0.00 0.00 2.29
2417 2497 4.024048 ACAAGTTCGAGCACCAGTTTTATG 60.024 41.667 1.01 0.00 0.00 1.90
2418 2498 4.134563 ACAAGTTCGAGCACCAGTTTTAT 58.865 39.130 1.01 0.00 0.00 1.40
2419 2499 3.537580 ACAAGTTCGAGCACCAGTTTTA 58.462 40.909 1.01 0.00 0.00 1.52
2420 2500 2.354821 GACAAGTTCGAGCACCAGTTTT 59.645 45.455 1.01 0.00 0.00 2.43
2421 2501 1.940613 GACAAGTTCGAGCACCAGTTT 59.059 47.619 1.01 0.00 0.00 2.66
2422 2502 1.134521 TGACAAGTTCGAGCACCAGTT 60.135 47.619 1.01 0.00 0.00 3.16
2423 2503 0.464036 TGACAAGTTCGAGCACCAGT 59.536 50.000 1.01 0.00 0.00 4.00
2424 2504 1.143305 CTGACAAGTTCGAGCACCAG 58.857 55.000 1.01 0.00 0.00 4.00
2425 2505 0.249868 CCTGACAAGTTCGAGCACCA 60.250 55.000 1.01 0.00 0.00 4.17
2426 2506 1.569479 GCCTGACAAGTTCGAGCACC 61.569 60.000 1.01 0.00 0.00 5.01
2427 2507 1.569479 GGCCTGACAAGTTCGAGCAC 61.569 60.000 1.01 0.00 0.00 4.40
2428 2508 1.301716 GGCCTGACAAGTTCGAGCA 60.302 57.895 1.01 0.00 0.00 4.26
2429 2509 2.383527 CGGCCTGACAAGTTCGAGC 61.384 63.158 0.00 0.00 0.00 5.03
2430 2510 1.006102 ACGGCCTGACAAGTTCGAG 60.006 57.895 0.00 0.00 0.00 4.04
2431 2511 1.300620 CACGGCCTGACAAGTTCGA 60.301 57.895 0.00 0.00 0.00 3.71
2432 2512 0.319211 TACACGGCCTGACAAGTTCG 60.319 55.000 0.00 0.00 0.00 3.95
2433 2513 1.873698 TTACACGGCCTGACAAGTTC 58.126 50.000 0.00 0.00 0.00 3.01
2434 2514 2.335316 TTTACACGGCCTGACAAGTT 57.665 45.000 0.00 0.00 0.00 2.66
2435 2515 2.561478 ATTTACACGGCCTGACAAGT 57.439 45.000 0.00 0.00 0.00 3.16
2436 2516 2.347452 CGTATTTACACGGCCTGACAAG 59.653 50.000 0.00 0.00 38.26 3.16
2437 2517 2.029200 TCGTATTTACACGGCCTGACAA 60.029 45.455 0.00 0.00 42.19 3.18
2438 2518 1.545136 TCGTATTTACACGGCCTGACA 59.455 47.619 0.00 0.00 42.19 3.58
2439 2519 2.282701 TCGTATTTACACGGCCTGAC 57.717 50.000 0.00 0.00 42.19 3.51
2440 2520 3.380954 TGTATCGTATTTACACGGCCTGA 59.619 43.478 0.00 0.00 42.19 3.86
2441 2521 3.708890 TGTATCGTATTTACACGGCCTG 58.291 45.455 0.00 0.21 42.19 4.85
2442 2522 4.553323 GATGTATCGTATTTACACGGCCT 58.447 43.478 0.00 0.00 42.19 5.19
2443 2523 3.676646 GGATGTATCGTATTTACACGGCC 59.323 47.826 0.00 0.00 42.19 6.13
2444 2524 4.300803 TGGATGTATCGTATTTACACGGC 58.699 43.478 0.00 0.00 42.19 5.68
2445 2525 6.643360 TGAATGGATGTATCGTATTTACACGG 59.357 38.462 0.00 0.00 42.19 4.94
2446 2526 7.631915 TGAATGGATGTATCGTATTTACACG 57.368 36.000 0.00 0.00 43.28 4.49
2451 2531 9.605275 CCTGATATGAATGGATGTATCGTATTT 57.395 33.333 0.00 0.00 0.00 1.40
2452 2532 8.981659 TCCTGATATGAATGGATGTATCGTATT 58.018 33.333 0.00 0.00 0.00 1.89
2453 2533 8.539117 TCCTGATATGAATGGATGTATCGTAT 57.461 34.615 0.00 0.00 0.00 3.06
2454 2534 7.954666 TCCTGATATGAATGGATGTATCGTA 57.045 36.000 0.00 0.00 0.00 3.43
2455 2535 6.857437 TCCTGATATGAATGGATGTATCGT 57.143 37.500 0.00 0.00 0.00 3.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.