Multiple sequence alignment - TraesCS2B01G528400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G528400 chr2B 100.000 2558 0 0 1 2558 722639271 722636714 0.000000e+00 4724.0
1 TraesCS2B01G528400 chr2A 83.754 1348 112 39 721 2017 729299574 729298283 0.000000e+00 1177.0
2 TraesCS2B01G528400 chr2A 88.000 600 30 13 1 589 729331133 729330565 0.000000e+00 671.0
3 TraesCS2B01G528400 chr2A 97.727 44 1 0 2037 2080 729298280 729298237 2.730000e-10 76.8
4 TraesCS2B01G528400 chr2D 84.015 1051 90 33 753 1752 595168007 595166984 0.000000e+00 939.0
5 TraesCS2B01G528400 chr2D 96.875 128 4 0 1 128 595169537 595169410 5.540000e-52 215.0
6 TraesCS2B01G528400 chr2D 80.420 143 11 7 1857 1995 595166987 595166858 2.710000e-15 93.5
7 TraesCS2B01G528400 chr5D 99.140 465 1 1 2097 2558 468181655 468181191 0.000000e+00 833.0
8 TraesCS2B01G528400 chr3A 99.140 465 1 1 2097 2558 690942461 690942925 0.000000e+00 833.0
9 TraesCS2B01G528400 chr3A 98.298 470 5 1 2092 2558 639229968 639229499 0.000000e+00 821.0
10 TraesCS2B01G528400 chr3A 98.093 472 6 1 2090 2558 640754255 640754726 0.000000e+00 819.0
11 TraesCS2B01G528400 chr7D 99.138 464 1 1 2098 2558 64828363 64827900 0.000000e+00 832.0
12 TraesCS2B01G528400 chr7B 99.138 464 1 1 2098 2558 505223939 505223476 0.000000e+00 832.0
13 TraesCS2B01G528400 chr4D 99.138 464 1 1 2098 2558 505351066 505350603 0.000000e+00 832.0
14 TraesCS2B01G528400 chr4B 99.138 464 1 1 2098 2558 42253557 42254020 0.000000e+00 832.0
15 TraesCS2B01G528400 chr3D 98.922 464 2 1 2098 2558 562178062 562177599 0.000000e+00 826.0
16 TraesCS2B01G528400 chr1D 93.478 46 3 0 1789 1834 59296654 59296699 4.570000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G528400 chr2B 722636714 722639271 2557 True 4724.000000 4724 100.000000 1 2558 1 chr2B.!!$R1 2557
1 TraesCS2B01G528400 chr2A 729330565 729331133 568 True 671.000000 671 88.000000 1 589 1 chr2A.!!$R1 588
2 TraesCS2B01G528400 chr2A 729298237 729299574 1337 True 626.900000 1177 90.740500 721 2080 2 chr2A.!!$R2 1359
3 TraesCS2B01G528400 chr2D 595166858 595169537 2679 True 415.833333 939 87.103333 1 1995 3 chr2D.!!$R1 1994

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
201 212 0.381089 CCTCAGACACGATACGTCCC 59.619 60.0 0.0 0.0 38.32 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1928 3049 0.030773 CCACGGATCATCGTCGTCAT 59.969 55.0 0.0 0.0 41.86 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 4.920112 TCCCAACACGGCCACACG 62.920 66.667 2.24 0.00 40.31 4.49
41 42 2.897846 CCAACACGGCCACACGAA 60.898 61.111 2.24 0.00 37.61 3.85
129 134 1.127397 CACACTATTGCACTGACAGCG 59.873 52.381 1.25 0.00 33.85 5.18
201 212 0.381089 CCTCAGACACGATACGTCCC 59.619 60.000 0.00 0.00 38.32 4.46
215 226 1.354337 CGTCCCACGACATGCTCAAG 61.354 60.000 0.00 0.00 46.05 3.02
309 321 1.884067 GCTGGGTCCTCTCTGGTTTTG 60.884 57.143 0.00 0.00 37.07 2.44
323 335 6.094881 TCTCTGGTTTTGTTGTCAGGTTTTAG 59.905 38.462 0.00 0.00 0.00 1.85
328 340 2.582052 TGTTGTCAGGTTTTAGCAGGG 58.418 47.619 0.00 0.00 0.00 4.45
349 361 2.561478 TCCCCACGAGAAAAAGAAGG 57.439 50.000 0.00 0.00 0.00 3.46
386 398 0.470833 CCAAATGTGGTGGTTCCCCA 60.471 55.000 0.00 0.00 40.42 4.96
413 425 4.687769 CGGCCCCTACTACCAAATTATTGT 60.688 45.833 0.00 0.00 34.60 2.71
414 426 5.205821 GGCCCCTACTACCAAATTATTGTT 58.794 41.667 0.00 0.00 34.60 2.83
415 427 5.068591 GGCCCCTACTACCAAATTATTGTTG 59.931 44.000 0.00 0.00 34.60 3.33
418 430 7.201758 GCCCCTACTACCAAATTATTGTTGTAC 60.202 40.741 0.00 0.00 34.60 2.90
427 439 7.083858 CCAAATTATTGTTGTACACTCCACTG 58.916 38.462 0.00 0.00 34.60 3.66
430 442 8.911918 AATTATTGTTGTACACTCCACTGTTA 57.088 30.769 0.00 0.00 0.00 2.41
447 459 4.109050 CTGTTAGACATTTCCTCTCGCTC 58.891 47.826 0.00 0.00 0.00 5.03
448 460 3.509967 TGTTAGACATTTCCTCTCGCTCA 59.490 43.478 0.00 0.00 0.00 4.26
449 461 4.160439 TGTTAGACATTTCCTCTCGCTCAT 59.840 41.667 0.00 0.00 0.00 2.90
484 496 3.943381 CAGTCACATGTGATGTTATGGCT 59.057 43.478 30.10 17.08 42.70 4.75
526 722 7.783090 AAGATCACATTATGCTAACACAGAG 57.217 36.000 0.00 0.00 0.00 3.35
532 728 4.901197 TTATGCTAACACAGAGGGTTGA 57.099 40.909 0.00 0.00 0.00 3.18
549 745 6.646267 AGGGTTGAAAAGATTATACACGCTA 58.354 36.000 0.00 0.00 0.00 4.26
552 748 7.178074 GGTTGAAAAGATTATACACGCTACAC 58.822 38.462 0.00 0.00 0.00 2.90
554 750 7.892778 TGAAAAGATTATACACGCTACACAA 57.107 32.000 0.00 0.00 0.00 3.33
598 794 8.893563 TTATCAACCAAGATTAAGGGTCAATT 57.106 30.769 0.00 0.00 32.67 2.32
599 795 6.588719 TCAACCAAGATTAAGGGTCAATTG 57.411 37.500 0.00 0.00 32.67 2.32
601 797 6.553100 TCAACCAAGATTAAGGGTCAATTGTT 59.447 34.615 5.13 0.00 32.67 2.83
602 798 6.994421 ACCAAGATTAAGGGTCAATTGTTT 57.006 33.333 5.13 0.00 0.00 2.83
603 799 7.373617 ACCAAGATTAAGGGTCAATTGTTTT 57.626 32.000 5.13 0.00 0.00 2.43
605 801 6.650390 CCAAGATTAAGGGTCAATTGTTTTGG 59.350 38.462 5.13 1.32 0.00 3.28
606 802 7.441017 CAAGATTAAGGGTCAATTGTTTTGGA 58.559 34.615 5.13 0.00 0.00 3.53
607 803 6.993079 AGATTAAGGGTCAATTGTTTTGGAC 58.007 36.000 5.13 0.00 0.00 4.02
608 804 3.726291 AAGGGTCAATTGTTTTGGACG 57.274 42.857 5.13 0.00 0.00 4.79
610 806 3.496331 AGGGTCAATTGTTTTGGACGAT 58.504 40.909 5.13 0.00 33.60 3.73
611 807 3.895041 AGGGTCAATTGTTTTGGACGATT 59.105 39.130 5.13 0.00 42.01 3.34
612 808 4.022329 AGGGTCAATTGTTTTGGACGATTC 60.022 41.667 5.13 0.00 39.80 2.52
613 809 4.022329 GGGTCAATTGTTTTGGACGATTCT 60.022 41.667 5.13 0.00 39.80 2.40
614 810 5.154222 GGTCAATTGTTTTGGACGATTCTC 58.846 41.667 5.13 0.00 39.80 2.87
615 811 5.154222 GTCAATTGTTTTGGACGATTCTCC 58.846 41.667 5.13 0.00 39.80 3.71
616 812 4.217550 TCAATTGTTTTGGACGATTCTCCC 59.782 41.667 5.13 0.00 39.80 4.30
617 813 3.502123 TTGTTTTGGACGATTCTCCCT 57.498 42.857 0.00 0.00 0.00 4.20
618 814 3.053831 TGTTTTGGACGATTCTCCCTC 57.946 47.619 0.00 0.00 0.00 4.30
619 815 2.290071 TGTTTTGGACGATTCTCCCTCC 60.290 50.000 0.00 0.00 0.00 4.30
620 816 0.909623 TTTGGACGATTCTCCCTCCC 59.090 55.000 0.00 0.00 0.00 4.30
621 817 0.981277 TTGGACGATTCTCCCTCCCC 60.981 60.000 0.00 0.00 0.00 4.81
622 818 1.382695 GGACGATTCTCCCTCCCCA 60.383 63.158 0.00 0.00 0.00 4.96
623 819 1.403687 GGACGATTCTCCCTCCCCAG 61.404 65.000 0.00 0.00 0.00 4.45
624 820 2.034048 GACGATTCTCCCTCCCCAGC 62.034 65.000 0.00 0.00 0.00 4.85
625 821 1.764054 CGATTCTCCCTCCCCAGCT 60.764 63.158 0.00 0.00 0.00 4.24
626 822 1.341156 CGATTCTCCCTCCCCAGCTT 61.341 60.000 0.00 0.00 0.00 3.74
627 823 0.922626 GATTCTCCCTCCCCAGCTTT 59.077 55.000 0.00 0.00 0.00 3.51
628 824 1.286257 GATTCTCCCTCCCCAGCTTTT 59.714 52.381 0.00 0.00 0.00 2.27
629 825 0.698818 TTCTCCCTCCCCAGCTTTTC 59.301 55.000 0.00 0.00 0.00 2.29
630 826 1.208165 TCTCCCTCCCCAGCTTTTCC 61.208 60.000 0.00 0.00 0.00 3.13
631 827 1.465188 TCCCTCCCCAGCTTTTCCA 60.465 57.895 0.00 0.00 0.00 3.53
632 828 1.071314 TCCCTCCCCAGCTTTTCCAA 61.071 55.000 0.00 0.00 0.00 3.53
638 834 1.474077 CCCCAGCTTTTCCAAGAATCG 59.526 52.381 0.00 0.00 30.57 3.34
646 842 4.214332 GCTTTTCCAAGAATCGACACTCTT 59.786 41.667 0.00 0.00 31.99 2.85
647 843 5.278022 GCTTTTCCAAGAATCGACACTCTTT 60.278 40.000 4.03 0.00 29.29 2.52
648 844 6.693315 TTTTCCAAGAATCGACACTCTTTT 57.307 33.333 4.03 0.00 29.29 2.27
649 845 6.693315 TTTCCAAGAATCGACACTCTTTTT 57.307 33.333 4.03 0.00 29.29 1.94
680 876 9.442062 TTTACAATCCTATCTAGTTATGGTCCA 57.558 33.333 0.00 0.00 0.00 4.02
682 878 8.331931 ACAATCCTATCTAGTTATGGTCCAAA 57.668 34.615 0.00 0.00 0.00 3.28
683 879 8.211629 ACAATCCTATCTAGTTATGGTCCAAAC 58.788 37.037 0.00 2.32 0.00 2.93
684 880 7.931015 ATCCTATCTAGTTATGGTCCAAACA 57.069 36.000 15.11 5.17 0.00 2.83
685 881 7.743116 TCCTATCTAGTTATGGTCCAAACAA 57.257 36.000 15.11 1.21 0.00 2.83
686 882 8.331931 TCCTATCTAGTTATGGTCCAAACAAT 57.668 34.615 15.11 9.89 0.00 2.71
687 883 8.778059 TCCTATCTAGTTATGGTCCAAACAATT 58.222 33.333 15.11 3.35 0.00 2.32
688 884 9.057089 CCTATCTAGTTATGGTCCAAACAATTC 57.943 37.037 15.11 0.00 0.00 2.17
718 914 6.548931 AAAAACGAAACAAGCTTTAACGAG 57.451 33.333 15.43 0.00 0.00 4.18
719 915 4.870221 AACGAAACAAGCTTTAACGAGT 57.130 36.364 15.43 0.00 0.00 4.18
720 916 4.448363 ACGAAACAAGCTTTAACGAGTC 57.552 40.909 15.43 0.00 0.00 3.36
724 920 2.059541 ACAAGCTTTAACGAGTCGAGC 58.940 47.619 21.50 17.29 0.00 5.03
725 921 1.390463 CAAGCTTTAACGAGTCGAGCC 59.610 52.381 21.50 2.77 33.96 4.70
726 922 0.601558 AGCTTTAACGAGTCGAGCCA 59.398 50.000 21.50 0.00 33.96 4.75
736 932 3.471620 TCGAGCCAGGCTTGACTT 58.528 55.556 25.92 0.00 43.30 3.01
787 1842 3.375642 GCAAGGAAGACTTTTTGACTGC 58.624 45.455 14.21 4.53 37.29 4.40
805 1860 1.019673 GCCATCGACAATGTCATGCT 58.980 50.000 14.24 0.00 33.13 3.79
836 1891 3.726782 GCCGATTACGTGGTGACATTTTC 60.727 47.826 0.00 0.00 46.14 2.29
837 1892 3.482923 CCGATTACGTGGTGACATTTTCG 60.483 47.826 0.00 0.00 46.14 3.46
860 1916 5.126384 CGTTCTTCAAATGGGGCCTAATTTA 59.874 40.000 14.58 3.58 0.00 1.40
877 1933 7.039714 GCCTAATTTACAAATATGCCTAAGCCT 60.040 37.037 0.00 0.00 38.69 4.58
912 1979 4.497300 GCATTTTGCATCATGTGTACCTT 58.503 39.130 7.31 0.00 44.26 3.50
913 1980 5.649557 GCATTTTGCATCATGTGTACCTTA 58.350 37.500 7.31 0.00 44.26 2.69
914 1981 5.745294 GCATTTTGCATCATGTGTACCTTAG 59.255 40.000 7.31 0.00 44.26 2.18
915 1982 4.963276 TTTGCATCATGTGTACCTTAGC 57.037 40.909 0.00 0.00 0.00 3.09
963 2030 1.091537 AGAGCTTCCTCTTCTCGTCG 58.908 55.000 0.00 0.00 46.16 5.12
964 2031 0.524604 GAGCTTCCTCTTCTCGTCGC 60.525 60.000 0.00 0.00 35.16 5.19
965 2032 0.963355 AGCTTCCTCTTCTCGTCGCT 60.963 55.000 0.00 0.00 0.00 4.93
1015 2085 0.169672 CACCATGGAAAAGCTGCTCG 59.830 55.000 21.47 0.00 0.00 5.03
1048 2118 2.386661 TTCAAGCCTTCTTCTAGCCG 57.613 50.000 0.00 0.00 0.00 5.52
1072 2142 3.917760 CGGACGATGCCTCCTCCC 61.918 72.222 0.00 0.00 0.00 4.30
1087 2157 2.024846 TCCTCCCGATCTTCTCTTCAGT 60.025 50.000 0.00 0.00 0.00 3.41
1143 2213 1.079819 TCGCAAAGGCCGAGAAGAG 60.080 57.895 0.00 0.00 36.38 2.85
1183 2256 3.482783 GTGAAGGCGAGCACGAGC 61.483 66.667 8.01 0.00 42.66 5.03
1204 2277 2.676839 CAGCATCATGAGGTCAGTTCAC 59.323 50.000 9.42 0.00 0.00 3.18
1205 2278 2.303890 AGCATCATGAGGTCAGTTCACA 59.696 45.455 9.42 0.00 0.00 3.58
1207 2280 3.064958 GCATCATGAGGTCAGTTCACATG 59.935 47.826 9.42 0.00 39.40 3.21
1208 2281 4.259356 CATCATGAGGTCAGTTCACATGT 58.741 43.478 0.09 0.00 39.18 3.21
1210 2283 3.580022 TCATGAGGTCAGTTCACATGTCT 59.420 43.478 0.00 0.00 39.18 3.41
1214 2287 1.339151 GGTCAGTTCACATGTCTCCCC 60.339 57.143 0.00 0.00 0.00 4.81
1232 2305 1.000274 CCCCCAAAAGCTTCAGAAACG 60.000 52.381 0.00 0.00 0.00 3.60
1242 2315 2.535574 GCTTCAGAAACGCAAAAACAGG 59.464 45.455 0.00 0.00 0.00 4.00
1250 2323 2.375146 ACGCAAAAACAGGGTTTCTCT 58.625 42.857 0.00 0.00 0.00 3.10
1260 2333 1.683385 AGGGTTTCTCTTGTGCTTTGC 59.317 47.619 0.00 0.00 0.00 3.68
1347 2420 5.750067 TCTGCTCAGAAGAAAATTGTTTTGC 59.250 36.000 0.00 0.00 33.91 3.68
1353 2426 7.198390 TCAGAAGAAAATTGTTTTGCTCAGAG 58.802 34.615 0.00 0.00 28.66 3.35
1360 2433 9.260002 GAAAATTGTTTTGCTCAGAGGAAAATA 57.740 29.630 26.93 22.79 45.01 1.40
1361 2434 8.593492 AAATTGTTTTGCTCAGAGGAAAATAC 57.407 30.769 26.93 18.65 45.01 1.89
1367 2442 2.289002 GCTCAGAGGAAAATACATGGCG 59.711 50.000 0.00 0.00 0.00 5.69
1368 2443 3.797039 CTCAGAGGAAAATACATGGCGA 58.203 45.455 0.00 0.00 0.00 5.54
1369 2444 4.384056 CTCAGAGGAAAATACATGGCGAT 58.616 43.478 0.00 0.00 0.00 4.58
1370 2445 4.129380 TCAGAGGAAAATACATGGCGATG 58.871 43.478 7.21 7.21 35.49 3.84
1371 2446 4.129380 CAGAGGAAAATACATGGCGATGA 58.871 43.478 16.26 0.00 33.36 2.92
1372 2447 4.212847 CAGAGGAAAATACATGGCGATGAG 59.787 45.833 16.26 0.00 33.36 2.90
1412 2508 0.755686 CCTATGGGAGTGGAGAGTGC 59.244 60.000 0.00 0.00 33.58 4.40
1455 2551 1.655885 GGAGGAACGAGGACGAGGAC 61.656 65.000 0.00 0.00 42.66 3.85
1474 2570 4.675029 CGGTTGCGACGGAAGGGT 62.675 66.667 0.61 0.00 0.00 4.34
1550 2646 1.142748 CGCACAAAAAGCACCCCAA 59.857 52.632 0.00 0.00 0.00 4.12
1551 2647 0.460987 CGCACAAAAAGCACCCCAAA 60.461 50.000 0.00 0.00 0.00 3.28
1559 2655 1.080638 AAGCACCCCAAACCATAGGA 58.919 50.000 0.00 0.00 0.00 2.94
1560 2656 1.308877 AGCACCCCAAACCATAGGAT 58.691 50.000 0.00 0.00 0.00 3.24
1561 2657 2.498441 AGCACCCCAAACCATAGGATA 58.502 47.619 0.00 0.00 0.00 2.59
1562 2658 2.443255 AGCACCCCAAACCATAGGATAG 59.557 50.000 0.00 0.00 0.00 2.08
1563 2659 2.489073 GCACCCCAAACCATAGGATAGG 60.489 54.545 0.00 0.00 0.00 2.57
1565 2661 1.075536 CCCCAAACCATAGGATAGGCC 59.924 57.143 0.00 0.00 0.00 5.19
1568 2664 2.040412 CCAAACCATAGGATAGGCCTCC 59.960 54.545 9.68 5.48 46.97 4.30
1569 2665 1.645710 AACCATAGGATAGGCCTCCG 58.354 55.000 9.68 0.00 46.97 4.63
1570 2666 0.252284 ACCATAGGATAGGCCTCCGG 60.252 60.000 9.68 5.14 46.97 5.14
1571 2667 1.617947 CCATAGGATAGGCCTCCGGC 61.618 65.000 9.68 0.00 46.97 6.13
1572 2668 0.616111 CATAGGATAGGCCTCCGGCT 60.616 60.000 9.68 0.00 46.97 5.52
1573 2669 0.324830 ATAGGATAGGCCTCCGGCTC 60.325 60.000 9.68 0.00 46.97 4.70
1604 2705 4.509970 CGTGTGTAATCTTGTCCAGTTCAA 59.490 41.667 0.00 0.00 0.00 2.69
1606 2707 6.373779 GTGTGTAATCTTGTCCAGTTCAATG 58.626 40.000 0.00 0.00 0.00 2.82
1612 2713 1.896220 TGTCCAGTTCAATGTCCTGC 58.104 50.000 0.00 0.00 0.00 4.85
1667 2774 5.592688 CCGGTTTTATGGAATTGGTGTATCT 59.407 40.000 0.00 0.00 0.00 1.98
1670 2777 7.264947 GGTTTTATGGAATTGGTGTATCTTGG 58.735 38.462 0.00 0.00 0.00 3.61
1672 2779 4.608170 ATGGAATTGGTGTATCTTGGGT 57.392 40.909 0.00 0.00 0.00 4.51
1685 2792 2.450479 CTTGGGTTCCTCGCCGTCTT 62.450 60.000 0.00 0.00 0.00 3.01
1708 2819 3.192422 TGTAAAAGATGGCCCACGATTTG 59.808 43.478 0.00 0.00 0.00 2.32
1753 2864 9.968870 AAGAAAAATCGAGATACATAGTAGTCC 57.031 33.333 0.00 0.00 0.00 3.85
1754 2865 9.132923 AGAAAAATCGAGATACATAGTAGTCCA 57.867 33.333 0.00 0.00 0.00 4.02
1755 2866 9.400638 GAAAAATCGAGATACATAGTAGTCCAG 57.599 37.037 0.00 0.00 0.00 3.86
1756 2867 8.466617 AAAATCGAGATACATAGTAGTCCAGT 57.533 34.615 0.00 0.00 0.00 4.00
1757 2868 8.466617 AAATCGAGATACATAGTAGTCCAGTT 57.533 34.615 0.00 0.00 0.00 3.16
1758 2869 8.466617 AATCGAGATACATAGTAGTCCAGTTT 57.533 34.615 0.00 0.00 0.00 2.66
1759 2870 7.876936 TCGAGATACATAGTAGTCCAGTTTT 57.123 36.000 0.00 0.00 0.00 2.43
1760 2871 8.289939 TCGAGATACATAGTAGTCCAGTTTTT 57.710 34.615 0.00 0.00 0.00 1.94
1761 2872 8.188799 TCGAGATACATAGTAGTCCAGTTTTTG 58.811 37.037 0.00 0.00 0.00 2.44
1784 2895 2.920076 TTTGTTGCTTGAGGCCGGGT 62.920 55.000 2.18 0.00 40.92 5.28
1785 2896 3.365265 GTTGCTTGAGGCCGGGTG 61.365 66.667 2.18 0.00 40.92 4.61
1786 2897 3.884774 TTGCTTGAGGCCGGGTGT 61.885 61.111 2.18 0.00 40.92 4.16
1791 2911 3.918253 TTGAGGCCGGGTGTGCATC 62.918 63.158 2.18 0.00 39.81 3.91
1798 2918 0.951525 CCGGGTGTGCATCGTGTTTA 60.952 55.000 0.00 0.00 0.00 2.01
1800 2920 1.202020 CGGGTGTGCATCGTGTTTATG 60.202 52.381 0.00 0.00 0.00 1.90
1820 2940 3.509442 TGTCCCCTTGATGCTTCATTTT 58.491 40.909 2.75 0.00 0.00 1.82
1821 2941 3.258872 TGTCCCCTTGATGCTTCATTTTG 59.741 43.478 2.75 0.00 0.00 2.44
1823 2943 3.765511 TCCCCTTGATGCTTCATTTTGAG 59.234 43.478 2.75 0.00 0.00 3.02
1827 2947 6.327934 CCCTTGATGCTTCATTTTGAGTTAG 58.672 40.000 2.75 0.00 0.00 2.34
1846 2966 9.210329 TGAGTTAGTAAAATTCACGCTTTATCA 57.790 29.630 0.00 0.00 0.00 2.15
1870 2990 6.676237 AAAAATAACTTGTGCCTTTGTTGG 57.324 33.333 0.00 0.00 0.00 3.77
1878 2998 1.034838 TGCCTTTGTTGGTTCGCTGT 61.035 50.000 0.00 0.00 0.00 4.40
1899 3020 1.860676 TGGTACAGTCGCTGTTTGTC 58.139 50.000 15.81 6.68 42.59 3.18
1988 3109 0.863957 GTTCAACACCACCAAACGCG 60.864 55.000 3.53 3.53 0.00 6.01
2017 3138 1.955529 GCACACGCACTCCACATACG 61.956 60.000 0.00 0.00 38.36 3.06
2018 3139 1.080093 ACACGCACTCCACATACGG 60.080 57.895 0.00 0.00 0.00 4.02
2019 3140 2.125673 ACGCACTCCACATACGGC 60.126 61.111 0.00 0.00 0.00 5.68
2020 3141 3.254654 CGCACTCCACATACGGCG 61.255 66.667 4.80 4.80 38.45 6.46
2021 3142 3.564027 GCACTCCACATACGGCGC 61.564 66.667 6.90 0.00 0.00 6.53
2022 3143 2.184322 CACTCCACATACGGCGCT 59.816 61.111 6.90 0.00 0.00 5.92
2023 3144 2.167219 CACTCCACATACGGCGCTG 61.167 63.158 16.39 16.39 0.00 5.18
2024 3145 2.184322 CTCCACATACGGCGCTGT 59.816 61.111 27.38 27.38 0.00 4.40
2025 3146 1.878522 CTCCACATACGGCGCTGTC 60.879 63.158 28.15 0.00 0.00 3.51
2026 3147 3.254654 CCACATACGGCGCTGTCG 61.255 66.667 28.15 20.56 36.42 4.35
2028 3149 2.506217 ACATACGGCGCTGTCGTG 60.506 61.111 28.15 26.08 45.67 4.35
2029 3150 3.254654 CATACGGCGCTGTCGTGG 61.255 66.667 28.15 10.10 45.67 4.94
2069 3190 4.579384 AAGTGTGCACGGGTGGGG 62.579 66.667 13.13 0.00 36.20 4.96
2093 3214 3.493303 GGAGGCTCCCATGGGGAC 61.493 72.222 30.93 22.62 46.17 4.46
2094 3215 2.367512 GAGGCTCCCATGGGGACT 60.368 66.667 30.93 26.88 46.17 3.85
2095 3216 1.074471 GAGGCTCCCATGGGGACTA 60.074 63.158 30.93 10.53 46.17 2.59
2096 3217 0.694444 GAGGCTCCCATGGGGACTAA 60.694 60.000 30.93 10.11 46.17 2.24
2097 3218 0.695803 AGGCTCCCATGGGGACTAAG 60.696 60.000 30.93 20.44 46.17 2.18
2098 3219 1.709994 GGCTCCCATGGGGACTAAGG 61.710 65.000 30.93 12.55 46.17 2.69
2099 3220 1.709994 GCTCCCATGGGGACTAAGGG 61.710 65.000 30.93 3.98 46.17 3.95
2100 3221 1.005556 TCCCATGGGGACTAAGGGG 59.994 63.158 30.93 0.30 46.17 4.79
2101 3222 2.927056 CCATGGGGACTAAGGGGC 59.073 66.667 2.85 0.00 35.59 5.80
2102 3223 1.697754 CCATGGGGACTAAGGGGCT 60.698 63.158 2.85 0.00 35.59 5.19
2103 3224 1.533711 CATGGGGACTAAGGGGCTG 59.466 63.158 0.00 0.00 0.00 4.85
2104 3225 1.084842 ATGGGGACTAAGGGGCTGT 59.915 57.895 0.00 0.00 0.00 4.40
2105 3226 0.552615 ATGGGGACTAAGGGGCTGTT 60.553 55.000 0.00 0.00 0.00 3.16
2106 3227 0.774491 TGGGGACTAAGGGGCTGTTT 60.774 55.000 0.00 0.00 0.00 2.83
2107 3228 0.323451 GGGGACTAAGGGGCTGTTTG 60.323 60.000 0.00 0.00 0.00 2.93
2108 3229 0.323451 GGGACTAAGGGGCTGTTTGG 60.323 60.000 0.00 0.00 0.00 3.28
2109 3230 0.696501 GGACTAAGGGGCTGTTTGGA 59.303 55.000 0.00 0.00 0.00 3.53
2110 3231 1.285078 GGACTAAGGGGCTGTTTGGAT 59.715 52.381 0.00 0.00 0.00 3.41
2111 3232 2.369394 GACTAAGGGGCTGTTTGGATG 58.631 52.381 0.00 0.00 0.00 3.51
2112 3233 1.005924 ACTAAGGGGCTGTTTGGATGG 59.994 52.381 0.00 0.00 0.00 3.51
2113 3234 1.005924 CTAAGGGGCTGTTTGGATGGT 59.994 52.381 0.00 0.00 0.00 3.55
2114 3235 0.542702 AAGGGGCTGTTTGGATGGTG 60.543 55.000 0.00 0.00 0.00 4.17
2115 3236 1.076549 GGGGCTGTTTGGATGGTGA 59.923 57.895 0.00 0.00 0.00 4.02
2116 3237 1.250840 GGGGCTGTTTGGATGGTGAC 61.251 60.000 0.00 0.00 0.00 3.67
2117 3238 1.250840 GGGCTGTTTGGATGGTGACC 61.251 60.000 0.00 0.00 0.00 4.02
2118 3239 0.539438 GGCTGTTTGGATGGTGACCA 60.539 55.000 6.84 6.84 38.19 4.02
2119 3240 1.327303 GCTGTTTGGATGGTGACCAA 58.673 50.000 9.06 0.00 44.27 3.67
2120 3241 1.000274 GCTGTTTGGATGGTGACCAAC 60.000 52.381 9.06 5.69 45.38 3.77
2121 3242 2.305928 CTGTTTGGATGGTGACCAACA 58.694 47.619 9.06 8.48 45.38 3.33
2122 3243 2.028130 TGTTTGGATGGTGACCAACAC 58.972 47.619 9.06 0.76 45.38 3.32
2123 3244 2.306847 GTTTGGATGGTGACCAACACT 58.693 47.619 9.06 0.00 45.38 3.55
2124 3245 3.117851 TGTTTGGATGGTGACCAACACTA 60.118 43.478 9.06 0.00 45.38 2.74
2125 3246 3.502211 GTTTGGATGGTGACCAACACTAG 59.498 47.826 9.06 0.00 45.38 2.57
2126 3247 4.059644 TTTGGATGGTGACCAACACTAGC 61.060 47.826 9.06 0.00 45.38 3.42
2132 3253 2.696506 GTGACCAACACTAGCCTTACC 58.303 52.381 0.00 0.00 45.13 2.85
2133 3254 2.038033 GTGACCAACACTAGCCTTACCA 59.962 50.000 0.00 0.00 45.13 3.25
2134 3255 2.706723 TGACCAACACTAGCCTTACCAA 59.293 45.455 0.00 0.00 0.00 3.67
2135 3256 3.136809 TGACCAACACTAGCCTTACCAAA 59.863 43.478 0.00 0.00 0.00 3.28
2136 3257 4.139038 GACCAACACTAGCCTTACCAAAA 58.861 43.478 0.00 0.00 0.00 2.44
2137 3258 4.538738 ACCAACACTAGCCTTACCAAAAA 58.461 39.130 0.00 0.00 0.00 1.94
2152 3273 3.978460 AAAAATTGGTCACGCCCAC 57.022 47.368 0.00 0.00 33.14 4.61
2154 3275 0.820074 AAAATTGGTCACGCCCACGA 60.820 50.000 0.00 0.00 43.93 4.35
2155 3276 0.608035 AAATTGGTCACGCCCACGAT 60.608 50.000 0.00 0.00 43.93 3.73
2156 3277 0.250793 AATTGGTCACGCCCACGATA 59.749 50.000 0.00 0.00 43.93 2.92
2157 3278 0.468226 ATTGGTCACGCCCACGATAT 59.532 50.000 0.00 0.00 43.93 1.63
2158 3279 0.250793 TTGGTCACGCCCACGATATT 59.749 50.000 0.00 0.00 43.93 1.28
2159 3280 0.250793 TGGTCACGCCCACGATATTT 59.749 50.000 0.00 0.00 43.93 1.40
2160 3281 0.655733 GGTCACGCCCACGATATTTG 59.344 55.000 0.00 0.00 43.93 2.32
2161 3282 0.655733 GTCACGCCCACGATATTTGG 59.344 55.000 0.00 0.00 43.93 3.28
2162 3283 1.092921 TCACGCCCACGATATTTGGC 61.093 55.000 0.00 0.00 43.93 4.52
2163 3284 1.095228 CACGCCCACGATATTTGGCT 61.095 55.000 0.00 0.00 43.93 4.75
2164 3285 0.466543 ACGCCCACGATATTTGGCTA 59.533 50.000 0.00 0.00 43.93 3.93
2165 3286 1.148310 CGCCCACGATATTTGGCTAG 58.852 55.000 0.00 0.00 43.93 3.42
2166 3287 0.875059 GCCCACGATATTTGGCTAGC 59.125 55.000 6.04 6.04 40.77 3.42
2167 3288 1.148310 CCCACGATATTTGGCTAGCG 58.852 55.000 9.00 0.00 36.62 4.26
2168 3289 1.540363 CCCACGATATTTGGCTAGCGT 60.540 52.381 9.00 0.00 43.80 5.07
2169 3290 2.210116 CCACGATATTTGGCTAGCGTT 58.790 47.619 9.00 0.00 40.49 4.84
2170 3291 2.612212 CCACGATATTTGGCTAGCGTTT 59.388 45.455 9.00 0.00 40.49 3.60
2171 3292 3.546020 CCACGATATTTGGCTAGCGTTTG 60.546 47.826 9.00 0.00 40.49 2.93
2172 3293 2.612212 ACGATATTTGGCTAGCGTTTGG 59.388 45.455 9.00 0.00 40.49 3.28
2173 3294 2.612212 CGATATTTGGCTAGCGTTTGGT 59.388 45.455 9.00 0.00 0.00 3.67
2174 3295 3.303132 CGATATTTGGCTAGCGTTTGGTC 60.303 47.826 9.00 2.40 0.00 4.02
2175 3296 2.200373 ATTTGGCTAGCGTTTGGTCT 57.800 45.000 9.00 0.00 0.00 3.85
2176 3297 1.234821 TTTGGCTAGCGTTTGGTCTG 58.765 50.000 9.00 0.00 0.00 3.51
2177 3298 0.605319 TTGGCTAGCGTTTGGTCTGG 60.605 55.000 9.00 0.00 0.00 3.86
2178 3299 1.003718 GGCTAGCGTTTGGTCTGGT 60.004 57.895 9.00 0.00 0.00 4.00
2179 3300 0.248289 GGCTAGCGTTTGGTCTGGTA 59.752 55.000 9.00 0.00 0.00 3.25
2180 3301 1.356938 GCTAGCGTTTGGTCTGGTAC 58.643 55.000 0.00 0.00 0.00 3.34
2192 3313 3.850122 GTCTGGTACCATTTTTGGCTC 57.150 47.619 16.75 0.00 0.00 4.70
2193 3314 2.161609 GTCTGGTACCATTTTTGGCTCG 59.838 50.000 16.75 0.00 0.00 5.03
2194 3315 0.885196 TGGTACCATTTTTGGCTCGC 59.115 50.000 11.60 0.00 0.00 5.03
2195 3316 0.172578 GGTACCATTTTTGGCTCGCC 59.827 55.000 7.15 0.00 0.00 5.54
2196 3317 0.885196 GTACCATTTTTGGCTCGCCA 59.115 50.000 6.52 6.52 45.63 5.69
2197 3318 1.476488 GTACCATTTTTGGCTCGCCAT 59.524 47.619 12.00 0.00 46.64 4.40
2198 3319 0.532115 ACCATTTTTGGCTCGCCATC 59.468 50.000 12.00 0.00 46.64 3.51
2199 3320 0.526096 CCATTTTTGGCTCGCCATCG 60.526 55.000 12.00 0.00 46.64 3.84
2200 3321 0.171007 CATTTTTGGCTCGCCATCGT 59.829 50.000 12.00 0.00 46.64 3.73
2201 3322 0.451783 ATTTTTGGCTCGCCATCGTC 59.548 50.000 12.00 0.00 46.64 4.20
2202 3323 1.906994 TTTTTGGCTCGCCATCGTCG 61.907 55.000 12.00 0.00 46.64 5.12
2203 3324 2.773397 TTTTGGCTCGCCATCGTCGA 62.773 55.000 12.00 0.00 46.64 4.20
2204 3325 3.982372 TTGGCTCGCCATCGTCGAC 62.982 63.158 12.00 5.18 46.64 4.20
2205 3326 4.194720 GGCTCGCCATCGTCGACT 62.195 66.667 14.70 0.00 36.96 4.18
2206 3327 2.202623 GCTCGCCATCGTCGACTT 60.203 61.111 14.70 0.00 36.96 3.01
2207 3328 2.508891 GCTCGCCATCGTCGACTTG 61.509 63.158 14.70 10.87 36.96 3.16
2208 3329 1.874019 CTCGCCATCGTCGACTTGG 60.874 63.158 23.09 23.09 36.96 3.61
2209 3330 2.885644 CGCCATCGTCGACTTGGG 60.886 66.667 26.34 19.22 0.00 4.12
2210 3331 3.195698 GCCATCGTCGACTTGGGC 61.196 66.667 26.34 23.52 0.00 5.36
2211 3332 2.885644 CCATCGTCGACTTGGGCG 60.886 66.667 20.84 5.64 0.00 6.13
2212 3333 3.554692 CATCGTCGACTTGGGCGC 61.555 66.667 14.70 0.00 0.00 6.53
2229 3350 4.138109 CGCCCGCGTACCGTTTTC 62.138 66.667 4.92 0.00 34.38 2.29
2230 3351 4.138109 GCCCGCGTACCGTTTTCG 62.138 66.667 4.92 0.00 43.67 3.46
2231 3352 4.138109 CCCGCGTACCGTTTTCGC 62.138 66.667 4.92 0.00 45.28 4.70
2232 3353 4.138109 CCGCGTACCGTTTTCGCC 62.138 66.667 4.92 0.00 45.85 5.54
2233 3354 3.404707 CGCGTACCGTTTTCGCCA 61.405 61.111 0.00 0.00 45.85 5.69
2234 3355 2.937486 GCGTACCGTTTTCGCCAA 59.063 55.556 0.00 0.00 43.41 4.52
2235 3356 1.439201 GCGTACCGTTTTCGCCAAC 60.439 57.895 0.00 0.00 43.41 3.77
2236 3357 1.834458 GCGTACCGTTTTCGCCAACT 61.834 55.000 0.00 0.00 43.41 3.16
2237 3358 0.162294 CGTACCGTTTTCGCCAACTC 59.838 55.000 0.00 0.00 42.58 3.01
2238 3359 0.162294 GTACCGTTTTCGCCAACTCG 59.838 55.000 0.00 0.00 42.58 4.18
2239 3360 1.559149 TACCGTTTTCGCCAACTCGC 61.559 55.000 0.00 0.00 42.58 5.03
2261 3382 4.020378 GAAACAGCGGCGCGGAAA 62.020 61.111 36.69 0.00 0.00 3.13
2262 3383 3.322706 GAAACAGCGGCGCGGAAAT 62.323 57.895 36.69 21.52 0.00 2.17
2263 3384 3.322706 AAACAGCGGCGCGGAAATC 62.323 57.895 36.69 4.48 0.00 2.17
2265 3386 4.228097 CAGCGGCGCGGAAATCAG 62.228 66.667 27.59 6.23 0.00 2.90
2273 3394 3.273048 CGGAAATCAGCCGCCAAA 58.727 55.556 0.00 0.00 42.55 3.28
2274 3395 1.583986 CGGAAATCAGCCGCCAAAA 59.416 52.632 0.00 0.00 42.55 2.44
2275 3396 0.173255 CGGAAATCAGCCGCCAAAAT 59.827 50.000 0.00 0.00 42.55 1.82
2276 3397 1.403679 CGGAAATCAGCCGCCAAAATA 59.596 47.619 0.00 0.00 42.55 1.40
2277 3398 2.034558 CGGAAATCAGCCGCCAAAATAT 59.965 45.455 0.00 0.00 42.55 1.28
2278 3399 3.490761 CGGAAATCAGCCGCCAAAATATT 60.491 43.478 0.00 0.00 42.55 1.28
2279 3400 3.803778 GGAAATCAGCCGCCAAAATATTG 59.196 43.478 0.00 0.00 36.25 1.90
2313 3434 4.457496 CGAGCCAGCCACCGTGAT 62.457 66.667 0.00 0.00 0.00 3.06
2314 3435 2.900273 GAGCCAGCCACCGTGATA 59.100 61.111 0.00 0.00 0.00 2.15
2315 3436 1.447643 GAGCCAGCCACCGTGATAT 59.552 57.895 0.00 0.00 0.00 1.63
2316 3437 0.679505 GAGCCAGCCACCGTGATATA 59.320 55.000 0.00 0.00 0.00 0.86
2317 3438 1.070134 GAGCCAGCCACCGTGATATAA 59.930 52.381 0.00 0.00 0.00 0.98
2318 3439 1.488812 AGCCAGCCACCGTGATATAAA 59.511 47.619 0.00 0.00 0.00 1.40
2319 3440 2.092646 AGCCAGCCACCGTGATATAAAA 60.093 45.455 0.00 0.00 0.00 1.52
2320 3441 2.290641 GCCAGCCACCGTGATATAAAAG 59.709 50.000 0.00 0.00 0.00 2.27
2321 3442 2.878406 CCAGCCACCGTGATATAAAAGG 59.122 50.000 0.00 0.00 0.00 3.11
2322 3443 2.290641 CAGCCACCGTGATATAAAAGGC 59.709 50.000 0.00 0.00 41.08 4.35
2323 3444 2.092646 AGCCACCGTGATATAAAAGGCA 60.093 45.455 0.00 0.00 43.13 4.75
2324 3445 2.032924 GCCACCGTGATATAAAAGGCAC 59.967 50.000 0.00 0.00 40.50 5.01
2334 3455 8.856490 GTGATATAAAAGGCACGATTGATTTT 57.144 30.769 0.00 0.00 31.66 1.82
2335 3456 9.301153 GTGATATAAAAGGCACGATTGATTTTT 57.699 29.630 0.00 0.00 30.28 1.94
2336 3457 9.515020 TGATATAAAAGGCACGATTGATTTTTC 57.485 29.630 0.00 0.00 30.28 2.29
2337 3458 8.871686 ATATAAAAGGCACGATTGATTTTTCC 57.128 30.769 0.00 0.00 30.28 3.13
2338 3459 3.592898 AAGGCACGATTGATTTTTCCC 57.407 42.857 0.00 0.00 0.00 3.97
2339 3460 1.824852 AGGCACGATTGATTTTTCCCC 59.175 47.619 0.00 0.00 0.00 4.81
2340 3461 1.548269 GGCACGATTGATTTTTCCCCA 59.452 47.619 0.00 0.00 0.00 4.96
2341 3462 2.606108 GCACGATTGATTTTTCCCCAC 58.394 47.619 0.00 0.00 0.00 4.61
2342 3463 2.673893 GCACGATTGATTTTTCCCCACC 60.674 50.000 0.00 0.00 0.00 4.61
2343 3464 2.825532 CACGATTGATTTTTCCCCACCT 59.174 45.455 0.00 0.00 0.00 4.00
2344 3465 2.825532 ACGATTGATTTTTCCCCACCTG 59.174 45.455 0.00 0.00 0.00 4.00
2345 3466 2.825532 CGATTGATTTTTCCCCACCTGT 59.174 45.455 0.00 0.00 0.00 4.00
2346 3467 3.258123 CGATTGATTTTTCCCCACCTGTT 59.742 43.478 0.00 0.00 0.00 3.16
2347 3468 4.618227 CGATTGATTTTTCCCCACCTGTTC 60.618 45.833 0.00 0.00 0.00 3.18
2348 3469 2.235016 TGATTTTTCCCCACCTGTTCG 58.765 47.619 0.00 0.00 0.00 3.95
2349 3470 0.966179 ATTTTTCCCCACCTGTTCGC 59.034 50.000 0.00 0.00 0.00 4.70
2350 3471 1.110518 TTTTTCCCCACCTGTTCGCC 61.111 55.000 0.00 0.00 0.00 5.54
2351 3472 2.285889 TTTTCCCCACCTGTTCGCCA 62.286 55.000 0.00 0.00 0.00 5.69
2352 3473 2.969300 TTTCCCCACCTGTTCGCCAC 62.969 60.000 0.00 0.00 0.00 5.01
2353 3474 3.953775 CCCCACCTGTTCGCCACT 61.954 66.667 0.00 0.00 0.00 4.00
2354 3475 2.113139 CCCACCTGTTCGCCACTT 59.887 61.111 0.00 0.00 0.00 3.16
2355 3476 1.528309 CCCACCTGTTCGCCACTTT 60.528 57.895 0.00 0.00 0.00 2.66
2356 3477 1.515521 CCCACCTGTTCGCCACTTTC 61.516 60.000 0.00 0.00 0.00 2.62
2357 3478 1.515521 CCACCTGTTCGCCACTTTCC 61.516 60.000 0.00 0.00 0.00 3.13
2358 3479 1.228154 ACCTGTTCGCCACTTTCCC 60.228 57.895 0.00 0.00 0.00 3.97
2359 3480 1.971695 CCTGTTCGCCACTTTCCCC 60.972 63.158 0.00 0.00 0.00 4.81
2360 3481 1.228124 CTGTTCGCCACTTTCCCCA 60.228 57.895 0.00 0.00 0.00 4.96
2361 3482 0.609131 CTGTTCGCCACTTTCCCCAT 60.609 55.000 0.00 0.00 0.00 4.00
2362 3483 0.608035 TGTTCGCCACTTTCCCCATC 60.608 55.000 0.00 0.00 0.00 3.51
2363 3484 0.322546 GTTCGCCACTTTCCCCATCT 60.323 55.000 0.00 0.00 0.00 2.90
2364 3485 0.035439 TTCGCCACTTTCCCCATCTC 60.035 55.000 0.00 0.00 0.00 2.75
2365 3486 0.909610 TCGCCACTTTCCCCATCTCT 60.910 55.000 0.00 0.00 0.00 3.10
2366 3487 0.462759 CGCCACTTTCCCCATCTCTC 60.463 60.000 0.00 0.00 0.00 3.20
2367 3488 0.915364 GCCACTTTCCCCATCTCTCT 59.085 55.000 0.00 0.00 0.00 3.10
2368 3489 1.283321 GCCACTTTCCCCATCTCTCTT 59.717 52.381 0.00 0.00 0.00 2.85
2369 3490 2.505819 GCCACTTTCCCCATCTCTCTTA 59.494 50.000 0.00 0.00 0.00 2.10
2370 3491 3.137360 GCCACTTTCCCCATCTCTCTTAT 59.863 47.826 0.00 0.00 0.00 1.73
2371 3492 4.745172 GCCACTTTCCCCATCTCTCTTATC 60.745 50.000 0.00 0.00 0.00 1.75
2372 3493 4.657969 CCACTTTCCCCATCTCTCTTATCT 59.342 45.833 0.00 0.00 0.00 1.98
2373 3494 5.221621 CCACTTTCCCCATCTCTCTTATCTC 60.222 48.000 0.00 0.00 0.00 2.75
2374 3495 4.904853 ACTTTCCCCATCTCTCTTATCTCC 59.095 45.833 0.00 0.00 0.00 3.71
2375 3496 4.559576 TTCCCCATCTCTCTTATCTCCA 57.440 45.455 0.00 0.00 0.00 3.86
2376 3497 3.850752 TCCCCATCTCTCTTATCTCCAC 58.149 50.000 0.00 0.00 0.00 4.02
2377 3498 2.560542 CCCCATCTCTCTTATCTCCACG 59.439 54.545 0.00 0.00 0.00 4.94
2378 3499 2.029470 CCCATCTCTCTTATCTCCACGC 60.029 54.545 0.00 0.00 0.00 5.34
2379 3500 2.625314 CCATCTCTCTTATCTCCACGCA 59.375 50.000 0.00 0.00 0.00 5.24
2380 3501 3.551863 CCATCTCTCTTATCTCCACGCAC 60.552 52.174 0.00 0.00 0.00 5.34
2381 3502 2.723273 TCTCTCTTATCTCCACGCACA 58.277 47.619 0.00 0.00 0.00 4.57
2382 3503 2.685388 TCTCTCTTATCTCCACGCACAG 59.315 50.000 0.00 0.00 0.00 3.66
2383 3504 2.685388 CTCTCTTATCTCCACGCACAGA 59.315 50.000 0.00 0.00 0.00 3.41
2384 3505 3.089284 TCTCTTATCTCCACGCACAGAA 58.911 45.455 0.00 0.00 0.00 3.02
2385 3506 3.129462 TCTCTTATCTCCACGCACAGAAG 59.871 47.826 0.00 0.00 0.00 2.85
2386 3507 1.929836 CTTATCTCCACGCACAGAAGC 59.070 52.381 0.00 0.00 0.00 3.86
2394 3515 2.126307 GCACAGAAGCGCTCTCGA 60.126 61.111 12.06 0.00 38.10 4.04
2395 3516 1.518133 GCACAGAAGCGCTCTCGAT 60.518 57.895 12.06 0.00 38.10 3.59
2396 3517 1.478622 GCACAGAAGCGCTCTCGATC 61.479 60.000 12.06 3.62 38.10 3.69
2397 3518 0.869454 CACAGAAGCGCTCTCGATCC 60.869 60.000 12.06 0.00 38.10 3.36
2398 3519 1.315981 ACAGAAGCGCTCTCGATCCA 61.316 55.000 12.06 0.00 38.10 3.41
2399 3520 0.179127 CAGAAGCGCTCTCGATCCAA 60.179 55.000 12.06 0.00 38.10 3.53
2400 3521 0.749649 AGAAGCGCTCTCGATCCAAT 59.250 50.000 12.06 0.00 38.10 3.16
2401 3522 1.135867 GAAGCGCTCTCGATCCAATC 58.864 55.000 12.06 0.00 38.10 2.67
2402 3523 0.461548 AAGCGCTCTCGATCCAATCA 59.538 50.000 12.06 0.00 38.10 2.57
2403 3524 0.249238 AGCGCTCTCGATCCAATCAC 60.249 55.000 2.64 0.00 38.10 3.06
2404 3525 1.218230 GCGCTCTCGATCCAATCACC 61.218 60.000 0.00 0.00 38.10 4.02
2405 3526 0.936764 CGCTCTCGATCCAATCACCG 60.937 60.000 0.00 0.00 38.10 4.94
2406 3527 0.598680 GCTCTCGATCCAATCACCGG 60.599 60.000 0.00 0.00 0.00 5.28
2407 3528 0.032678 CTCTCGATCCAATCACCGGG 59.967 60.000 6.32 0.00 0.00 5.73
2408 3529 1.595382 CTCGATCCAATCACCGGGC 60.595 63.158 6.32 0.00 0.00 6.13
2409 3530 2.967076 CGATCCAATCACCGGGCG 60.967 66.667 6.32 0.00 0.00 6.13
2410 3531 2.591715 GATCCAATCACCGGGCGG 60.592 66.667 6.32 0.00 42.03 6.13
2411 3532 4.875713 ATCCAATCACCGGGCGGC 62.876 66.667 6.32 0.00 39.32 6.53
2432 3553 3.414700 GTTCTGCGTCGGTGCCAG 61.415 66.667 0.00 0.00 0.00 4.85
2438 3559 2.811317 CGTCGGTGCCAGCTTCTC 60.811 66.667 0.00 0.00 0.00 2.87
2439 3560 2.435059 GTCGGTGCCAGCTTCTCC 60.435 66.667 0.00 0.00 0.00 3.71
2440 3561 4.069232 TCGGTGCCAGCTTCTCCG 62.069 66.667 16.06 16.06 42.12 4.63
2473 3594 3.753434 CGACGCTGCTCCACCTCT 61.753 66.667 0.00 0.00 0.00 3.69
2474 3595 2.183046 GACGCTGCTCCACCTCTC 59.817 66.667 0.00 0.00 0.00 3.20
2475 3596 3.691744 GACGCTGCTCCACCTCTCG 62.692 68.421 0.00 0.00 0.00 4.04
2477 3598 4.828925 GCTGCTCCACCTCTCGCC 62.829 72.222 0.00 0.00 0.00 5.54
2478 3599 4.154347 CTGCTCCACCTCTCGCCC 62.154 72.222 0.00 0.00 0.00 6.13
2479 3600 4.704103 TGCTCCACCTCTCGCCCT 62.704 66.667 0.00 0.00 0.00 5.19
2480 3601 3.844090 GCTCCACCTCTCGCCCTC 61.844 72.222 0.00 0.00 0.00 4.30
2481 3602 3.151022 CTCCACCTCTCGCCCTCC 61.151 72.222 0.00 0.00 0.00 4.30
2482 3603 3.670629 CTCCACCTCTCGCCCTCCT 62.671 68.421 0.00 0.00 0.00 3.69
2483 3604 3.151022 CCACCTCTCGCCCTCCTC 61.151 72.222 0.00 0.00 0.00 3.71
2484 3605 2.043450 CACCTCTCGCCCTCCTCT 60.043 66.667 0.00 0.00 0.00 3.69
2485 3606 2.124693 CACCTCTCGCCCTCCTCTC 61.125 68.421 0.00 0.00 0.00 3.20
2486 3607 2.520741 CCTCTCGCCCTCCTCTCC 60.521 72.222 0.00 0.00 0.00 3.71
2487 3608 2.520741 CTCTCGCCCTCCTCTCCC 60.521 72.222 0.00 0.00 0.00 4.30
2488 3609 3.347590 TCTCGCCCTCCTCTCCCA 61.348 66.667 0.00 0.00 0.00 4.37
2489 3610 2.837291 CTCGCCCTCCTCTCCCAG 60.837 72.222 0.00 0.00 0.00 4.45
2490 3611 3.670629 CTCGCCCTCCTCTCCCAGT 62.671 68.421 0.00 0.00 0.00 4.00
2491 3612 3.151022 CGCCCTCCTCTCCCAGTC 61.151 72.222 0.00 0.00 0.00 3.51
2492 3613 2.039624 GCCCTCCTCTCCCAGTCA 59.960 66.667 0.00 0.00 0.00 3.41
2493 3614 1.613630 GCCCTCCTCTCCCAGTCAA 60.614 63.158 0.00 0.00 0.00 3.18
2494 3615 1.621672 GCCCTCCTCTCCCAGTCAAG 61.622 65.000 0.00 0.00 0.00 3.02
2495 3616 1.621672 CCCTCCTCTCCCAGTCAAGC 61.622 65.000 0.00 0.00 0.00 4.01
2496 3617 0.617249 CCTCCTCTCCCAGTCAAGCT 60.617 60.000 0.00 0.00 0.00 3.74
2497 3618 1.342474 CCTCCTCTCCCAGTCAAGCTA 60.342 57.143 0.00 0.00 0.00 3.32
2498 3619 1.754226 CTCCTCTCCCAGTCAAGCTAC 59.246 57.143 0.00 0.00 0.00 3.58
2499 3620 0.457851 CCTCTCCCAGTCAAGCTACG 59.542 60.000 0.00 0.00 0.00 3.51
2500 3621 0.179124 CTCTCCCAGTCAAGCTACGC 60.179 60.000 0.00 0.00 0.00 4.42
2501 3622 0.612174 TCTCCCAGTCAAGCTACGCT 60.612 55.000 0.00 0.00 42.56 5.07
2502 3623 0.179124 CTCCCAGTCAAGCTACGCTC 60.179 60.000 0.00 0.00 38.25 5.03
2503 3624 1.153549 CCCAGTCAAGCTACGCTCC 60.154 63.158 0.00 0.00 38.25 4.70
2504 3625 1.591703 CCAGTCAAGCTACGCTCCA 59.408 57.895 0.00 0.00 38.25 3.86
2505 3626 0.037326 CCAGTCAAGCTACGCTCCAA 60.037 55.000 0.00 0.00 38.25 3.53
2506 3627 1.354040 CAGTCAAGCTACGCTCCAAG 58.646 55.000 0.00 0.00 38.25 3.61
2507 3628 0.247736 AGTCAAGCTACGCTCCAAGG 59.752 55.000 0.00 0.00 38.25 3.61
2508 3629 0.037232 GTCAAGCTACGCTCCAAGGT 60.037 55.000 0.00 0.00 38.25 3.50
2509 3630 0.246635 TCAAGCTACGCTCCAAGGTC 59.753 55.000 0.00 0.00 38.25 3.85
2510 3631 0.037326 CAAGCTACGCTCCAAGGTCA 60.037 55.000 0.00 0.00 38.25 4.02
2511 3632 0.247736 AAGCTACGCTCCAAGGTCAG 59.752 55.000 0.00 0.00 38.25 3.51
2512 3633 1.811679 GCTACGCTCCAAGGTCAGC 60.812 63.158 0.00 0.00 0.00 4.26
2513 3634 1.153549 CTACGCTCCAAGGTCAGCC 60.154 63.158 0.00 0.00 31.37 4.85
2514 3635 1.888436 CTACGCTCCAAGGTCAGCCA 61.888 60.000 0.00 0.00 37.19 4.75
2515 3636 2.167398 TACGCTCCAAGGTCAGCCAC 62.167 60.000 0.00 0.00 37.19 5.01
2516 3637 2.753029 GCTCCAAGGTCAGCCACT 59.247 61.111 0.00 0.00 37.19 4.00
2517 3638 1.673665 GCTCCAAGGTCAGCCACTG 60.674 63.158 0.00 0.00 37.19 3.66
2518 3639 2.061220 CTCCAAGGTCAGCCACTGA 58.939 57.895 0.00 0.00 38.25 3.41
2519 3640 0.397941 CTCCAAGGTCAGCCACTGAA 59.602 55.000 0.00 0.00 42.46 3.02
2520 3641 0.843309 TCCAAGGTCAGCCACTGAAA 59.157 50.000 0.00 0.00 42.46 2.69
2521 3642 1.425066 TCCAAGGTCAGCCACTGAAAT 59.575 47.619 0.00 0.00 42.46 2.17
2522 3643 1.815003 CCAAGGTCAGCCACTGAAATC 59.185 52.381 0.00 0.00 42.46 2.17
2523 3644 1.815003 CAAGGTCAGCCACTGAAATCC 59.185 52.381 0.00 0.00 42.46 3.01
2524 3645 0.329596 AGGTCAGCCACTGAAATCCC 59.670 55.000 0.00 0.00 42.46 3.85
2525 3646 0.681243 GGTCAGCCACTGAAATCCCC 60.681 60.000 0.00 0.00 42.46 4.81
2526 3647 0.038166 GTCAGCCACTGAAATCCCCA 59.962 55.000 0.00 0.00 42.46 4.96
2527 3648 1.002069 TCAGCCACTGAAATCCCCAT 58.998 50.000 0.00 0.00 37.57 4.00
2528 3649 1.064463 TCAGCCACTGAAATCCCCATC 60.064 52.381 0.00 0.00 37.57 3.51
2529 3650 0.259938 AGCCACTGAAATCCCCATCC 59.740 55.000 0.00 0.00 0.00 3.51
2530 3651 0.033208 GCCACTGAAATCCCCATCCA 60.033 55.000 0.00 0.00 0.00 3.41
2531 3652 1.619432 GCCACTGAAATCCCCATCCAA 60.619 52.381 0.00 0.00 0.00 3.53
2532 3653 2.102578 CCACTGAAATCCCCATCCAAC 58.897 52.381 0.00 0.00 0.00 3.77
2533 3654 2.557229 CCACTGAAATCCCCATCCAACA 60.557 50.000 0.00 0.00 0.00 3.33
2534 3655 2.493278 CACTGAAATCCCCATCCAACAC 59.507 50.000 0.00 0.00 0.00 3.32
2535 3656 2.379907 ACTGAAATCCCCATCCAACACT 59.620 45.455 0.00 0.00 0.00 3.55
2536 3657 3.591527 ACTGAAATCCCCATCCAACACTA 59.408 43.478 0.00 0.00 0.00 2.74
2537 3658 3.947834 CTGAAATCCCCATCCAACACTAC 59.052 47.826 0.00 0.00 0.00 2.73
2538 3659 3.591527 TGAAATCCCCATCCAACACTACT 59.408 43.478 0.00 0.00 0.00 2.57
2539 3660 3.933861 AATCCCCATCCAACACTACTC 57.066 47.619 0.00 0.00 0.00 2.59
2540 3661 1.580059 TCCCCATCCAACACTACTCC 58.420 55.000 0.00 0.00 0.00 3.85
2541 3662 0.178068 CCCCATCCAACACTACTCCG 59.822 60.000 0.00 0.00 0.00 4.63
2542 3663 1.191535 CCCATCCAACACTACTCCGA 58.808 55.000 0.00 0.00 0.00 4.55
2543 3664 1.762957 CCCATCCAACACTACTCCGAT 59.237 52.381 0.00 0.00 0.00 4.18
2544 3665 2.224066 CCCATCCAACACTACTCCGATC 60.224 54.545 0.00 0.00 0.00 3.69
2545 3666 2.224066 CCATCCAACACTACTCCGATCC 60.224 54.545 0.00 0.00 0.00 3.36
2546 3667 1.481871 TCCAACACTACTCCGATCCC 58.518 55.000 0.00 0.00 0.00 3.85
2547 3668 0.464452 CCAACACTACTCCGATCCCC 59.536 60.000 0.00 0.00 0.00 4.81
2548 3669 1.486211 CAACACTACTCCGATCCCCT 58.514 55.000 0.00 0.00 0.00 4.79
2549 3670 1.831736 CAACACTACTCCGATCCCCTT 59.168 52.381 0.00 0.00 0.00 3.95
2550 3671 2.236395 CAACACTACTCCGATCCCCTTT 59.764 50.000 0.00 0.00 0.00 3.11
2551 3672 2.547990 ACACTACTCCGATCCCCTTTT 58.452 47.619 0.00 0.00 0.00 2.27
2552 3673 2.500504 ACACTACTCCGATCCCCTTTTC 59.499 50.000 0.00 0.00 0.00 2.29
2553 3674 2.766828 CACTACTCCGATCCCCTTTTCT 59.233 50.000 0.00 0.00 0.00 2.52
2554 3675 3.958798 CACTACTCCGATCCCCTTTTCTA 59.041 47.826 0.00 0.00 0.00 2.10
2555 3676 4.589374 CACTACTCCGATCCCCTTTTCTAT 59.411 45.833 0.00 0.00 0.00 1.98
2556 3677 4.589374 ACTACTCCGATCCCCTTTTCTATG 59.411 45.833 0.00 0.00 0.00 2.23
2557 3678 2.706190 ACTCCGATCCCCTTTTCTATGG 59.294 50.000 0.00 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 7.767198 CGTGTTGGGAGGAAGTTAAATATAGAA 59.233 37.037 0.00 0.00 0.00 2.10
39 40 5.952033 ACATGTCTACTCTTTCGGTAGTTC 58.048 41.667 0.00 0.00 38.16 3.01
41 42 5.008331 TGACATGTCTACTCTTTCGGTAGT 58.992 41.667 25.55 0.00 38.16 2.73
159 164 5.370880 GGGAATGGGCCTATACATCATCTAT 59.629 44.000 0.24 0.00 0.00 1.98
160 165 4.721776 GGGAATGGGCCTATACATCATCTA 59.278 45.833 0.24 0.00 0.00 1.98
161 166 3.525199 GGGAATGGGCCTATACATCATCT 59.475 47.826 0.24 0.00 0.00 2.90
162 167 3.525199 AGGGAATGGGCCTATACATCATC 59.475 47.826 0.24 0.00 0.00 2.92
163 168 3.525199 GAGGGAATGGGCCTATACATCAT 59.475 47.826 0.24 0.00 0.00 2.45
164 169 2.912956 GAGGGAATGGGCCTATACATCA 59.087 50.000 0.24 0.00 0.00 3.07
165 170 2.912956 TGAGGGAATGGGCCTATACATC 59.087 50.000 0.24 6.72 0.00 3.06
167 172 2.090210 TCTGAGGGAATGGGCCTATACA 60.090 50.000 0.24 0.00 0.00 2.29
201 212 1.073964 CTCACCTTGAGCATGTCGTG 58.926 55.000 0.00 0.00 37.72 4.35
204 215 1.364626 CGCCTCACCTTGAGCATGTC 61.365 60.000 0.00 0.00 42.98 3.06
281 293 1.139853 GAGAGGACCCAGCACCAATAG 59.860 57.143 0.00 0.00 0.00 1.73
309 321 2.858745 TCCCTGCTAAAACCTGACAAC 58.141 47.619 0.00 0.00 0.00 3.32
323 335 1.910580 TTTCTCGTGGGGATCCCTGC 61.911 60.000 30.08 20.55 45.70 4.85
328 340 3.010420 CCTTCTTTTTCTCGTGGGGATC 58.990 50.000 0.00 0.00 0.00 3.36
349 361 0.377203 GGCTACTTGTTGCCGTATGC 59.623 55.000 10.10 0.00 39.71 3.14
386 398 2.847715 GGTAGTAGGGGCCGGCAT 60.848 66.667 30.85 16.22 0.00 4.40
413 425 5.801531 ATGTCTAACAGTGGAGTGTACAA 57.198 39.130 0.00 0.00 0.00 2.41
414 426 5.801531 AATGTCTAACAGTGGAGTGTACA 57.198 39.130 0.00 0.00 0.00 2.90
415 427 5.638234 GGAAATGTCTAACAGTGGAGTGTAC 59.362 44.000 0.00 0.00 0.00 2.90
418 430 4.899502 AGGAAATGTCTAACAGTGGAGTG 58.100 43.478 0.00 0.00 0.00 3.51
427 439 4.111375 TGAGCGAGAGGAAATGTCTAAC 57.889 45.455 0.00 0.00 0.00 2.34
430 442 2.762887 TCATGAGCGAGAGGAAATGTCT 59.237 45.455 0.00 0.00 0.00 3.41
447 459 1.625315 TGACTGAACCTGGGAGTCATG 59.375 52.381 16.86 0.00 40.88 3.07
448 460 1.625818 GTGACTGAACCTGGGAGTCAT 59.374 52.381 21.18 4.70 45.84 3.06
449 461 1.048601 GTGACTGAACCTGGGAGTCA 58.951 55.000 16.86 16.86 42.96 3.41
484 496 8.971073 TGTGATCTTAATTATCTCAGTCTGTGA 58.029 33.333 7.05 7.05 0.00 3.58
526 722 5.813080 AGCGTGTATAATCTTTTCAACCC 57.187 39.130 0.00 0.00 0.00 4.11
532 728 8.319143 ACTTTGTGTAGCGTGTATAATCTTTT 57.681 30.769 0.00 0.00 0.00 2.27
580 776 6.650390 CCAAAACAATTGACCCTTAATCTTGG 59.350 38.462 13.59 3.31 0.00 3.61
590 786 3.934457 ATCGTCCAAAACAATTGACCC 57.066 42.857 13.59 0.00 0.00 4.46
592 788 5.154222 GGAGAATCGTCCAAAACAATTGAC 58.846 41.667 13.59 0.00 36.51 3.18
593 789 4.217550 GGGAGAATCGTCCAAAACAATTGA 59.782 41.667 13.59 0.00 38.52 2.57
594 790 4.218417 AGGGAGAATCGTCCAAAACAATTG 59.782 41.667 3.24 3.24 38.52 2.32
595 791 4.407365 AGGGAGAATCGTCCAAAACAATT 58.593 39.130 0.00 0.00 38.52 2.32
596 792 4.010349 GAGGGAGAATCGTCCAAAACAAT 58.990 43.478 0.00 0.00 38.52 2.71
597 793 3.408634 GAGGGAGAATCGTCCAAAACAA 58.591 45.455 0.00 0.00 38.52 2.83
598 794 2.290071 GGAGGGAGAATCGTCCAAAACA 60.290 50.000 0.00 0.00 40.37 2.83
599 795 2.357075 GGAGGGAGAATCGTCCAAAAC 58.643 52.381 0.00 0.00 40.37 2.43
601 797 0.909623 GGGAGGGAGAATCGTCCAAA 59.090 55.000 6.04 0.00 41.89 3.28
602 798 0.981277 GGGGAGGGAGAATCGTCCAA 60.981 60.000 6.04 0.00 41.89 3.53
603 799 1.382695 GGGGAGGGAGAATCGTCCA 60.383 63.158 6.04 0.00 41.89 4.02
605 801 2.034048 GCTGGGGAGGGAGAATCGTC 62.034 65.000 0.00 0.00 34.37 4.20
606 802 2.066999 GCTGGGGAGGGAGAATCGT 61.067 63.158 0.00 0.00 34.37 3.73
607 803 1.341156 AAGCTGGGGAGGGAGAATCG 61.341 60.000 0.00 0.00 34.37 3.34
608 804 0.922626 AAAGCTGGGGAGGGAGAATC 59.077 55.000 0.00 0.00 0.00 2.52
610 806 0.698818 GAAAAGCTGGGGAGGGAGAA 59.301 55.000 0.00 0.00 0.00 2.87
611 807 1.208165 GGAAAAGCTGGGGAGGGAGA 61.208 60.000 0.00 0.00 0.00 3.71
612 808 1.304617 GGAAAAGCTGGGGAGGGAG 59.695 63.158 0.00 0.00 0.00 4.30
613 809 1.071314 TTGGAAAAGCTGGGGAGGGA 61.071 55.000 0.00 0.00 0.00 4.20
614 810 0.613012 CTTGGAAAAGCTGGGGAGGG 60.613 60.000 0.00 0.00 0.00 4.30
615 811 0.405585 TCTTGGAAAAGCTGGGGAGG 59.594 55.000 0.00 0.00 0.00 4.30
616 812 2.292828 TTCTTGGAAAAGCTGGGGAG 57.707 50.000 0.00 0.00 0.00 4.30
617 813 2.807676 GATTCTTGGAAAAGCTGGGGA 58.192 47.619 0.00 0.00 0.00 4.81
618 814 1.474077 CGATTCTTGGAAAAGCTGGGG 59.526 52.381 0.00 0.00 0.00 4.96
619 815 2.162408 GTCGATTCTTGGAAAAGCTGGG 59.838 50.000 0.00 0.00 0.00 4.45
620 816 2.813754 TGTCGATTCTTGGAAAAGCTGG 59.186 45.455 0.00 0.00 0.00 4.85
621 817 3.499918 AGTGTCGATTCTTGGAAAAGCTG 59.500 43.478 0.00 0.00 0.00 4.24
622 818 3.744660 AGTGTCGATTCTTGGAAAAGCT 58.255 40.909 0.00 0.00 0.00 3.74
623 819 3.748568 AGAGTGTCGATTCTTGGAAAAGC 59.251 43.478 0.00 0.00 0.00 3.51
624 820 5.931441 AAGAGTGTCGATTCTTGGAAAAG 57.069 39.130 8.44 0.00 32.65 2.27
625 821 6.693315 AAAAGAGTGTCGATTCTTGGAAAA 57.307 33.333 9.59 0.00 34.09 2.29
626 822 6.693315 AAAAAGAGTGTCGATTCTTGGAAA 57.307 33.333 9.59 0.00 34.09 3.13
655 851 9.442062 TTGGACCATAACTAGATAGGATTGTAA 57.558 33.333 0.00 0.00 0.00 2.41
658 854 8.210946 TGTTTGGACCATAACTAGATAGGATTG 58.789 37.037 15.83 0.00 0.00 2.67
660 856 7.931015 TGTTTGGACCATAACTAGATAGGAT 57.069 36.000 15.83 0.00 0.00 3.24
661 857 7.743116 TTGTTTGGACCATAACTAGATAGGA 57.257 36.000 15.83 0.00 0.00 2.94
663 859 9.838339 AGAATTGTTTGGACCATAACTAGATAG 57.162 33.333 15.83 0.00 0.00 2.08
666 862 9.832445 GATAGAATTGTTTGGACCATAACTAGA 57.168 33.333 15.83 6.97 0.00 2.43
667 863 9.838339 AGATAGAATTGTTTGGACCATAACTAG 57.162 33.333 15.83 0.00 0.00 2.57
699 895 3.060740 CGACTCGTTAAAGCTTGTTTCGT 60.061 43.478 0.00 0.00 0.00 3.85
700 896 3.180980 TCGACTCGTTAAAGCTTGTTTCG 59.819 43.478 0.00 3.50 0.00 3.46
701 897 4.689079 CTCGACTCGTTAAAGCTTGTTTC 58.311 43.478 0.00 0.00 0.00 2.78
705 901 1.390463 GGCTCGACTCGTTAAAGCTTG 59.610 52.381 0.00 0.00 33.50 4.01
707 903 0.601558 TGGCTCGACTCGTTAAAGCT 59.398 50.000 9.08 0.00 33.50 3.74
708 904 0.992802 CTGGCTCGACTCGTTAAAGC 59.007 55.000 0.00 0.00 0.00 3.51
709 905 1.630148 CCTGGCTCGACTCGTTAAAG 58.370 55.000 0.00 0.00 0.00 1.85
710 906 0.389426 GCCTGGCTCGACTCGTTAAA 60.389 55.000 12.43 0.00 0.00 1.52
711 907 1.214589 GCCTGGCTCGACTCGTTAA 59.785 57.895 12.43 0.00 0.00 2.01
712 908 1.248785 AAGCCTGGCTCGACTCGTTA 61.249 55.000 23.61 0.00 38.25 3.18
717 913 1.910772 AGTCAAGCCTGGCTCGACT 60.911 57.895 31.45 31.45 46.44 4.18
718 914 1.004440 AAGTCAAGCCTGGCTCGAC 60.004 57.895 28.18 28.18 42.26 4.20
719 915 1.004560 CAAGTCAAGCCTGGCTCGA 60.005 57.895 23.61 14.62 36.11 4.04
720 916 2.037136 CCAAGTCAAGCCTGGCTCG 61.037 63.158 23.61 11.86 36.11 5.03
724 920 0.538057 TTGAGCCAAGTCAAGCCTGG 60.538 55.000 0.00 0.00 32.54 4.45
725 921 1.321474 TTTGAGCCAAGTCAAGCCTG 58.679 50.000 0.00 0.00 37.72 4.85
726 922 2.299326 ATTTGAGCCAAGTCAAGCCT 57.701 45.000 0.00 0.00 37.72 4.58
787 1842 2.282407 TCAGCATGACATTGTCGATGG 58.718 47.619 20.70 10.10 42.56 3.51
805 1860 0.892755 ACGTAATCGGCTTGGAGTCA 59.107 50.000 0.00 0.00 41.85 3.41
836 1891 2.122783 TAGGCCCCATTTGAAGAACG 57.877 50.000 0.00 0.00 0.00 3.95
837 1892 5.420725 AAATTAGGCCCCATTTGAAGAAC 57.579 39.130 0.00 0.00 0.00 3.01
877 1933 1.675483 CAAAATGCATACTGGCGCCTA 59.325 47.619 29.70 13.53 36.28 3.93
899 1955 5.643777 GTGTCTTTGCTAAGGTACACATGAT 59.356 40.000 20.25 0.00 38.24 2.45
900 1956 4.994852 GTGTCTTTGCTAAGGTACACATGA 59.005 41.667 20.25 0.00 38.24 3.07
901 1957 4.143115 CGTGTCTTTGCTAAGGTACACATG 60.143 45.833 22.83 14.95 38.25 3.21
912 1979 3.089284 TCTCTCATCCGTGTCTTTGCTA 58.911 45.455 0.00 0.00 0.00 3.49
913 1980 1.895798 TCTCTCATCCGTGTCTTTGCT 59.104 47.619 0.00 0.00 0.00 3.91
914 1981 2.266554 CTCTCTCATCCGTGTCTTTGC 58.733 52.381 0.00 0.00 0.00 3.68
915 1982 2.266554 GCTCTCTCATCCGTGTCTTTG 58.733 52.381 0.00 0.00 0.00 2.77
955 2022 1.464734 AATGGAGAGAGCGACGAGAA 58.535 50.000 0.00 0.00 0.00 2.87
956 2023 2.327200 TAATGGAGAGAGCGACGAGA 57.673 50.000 0.00 0.00 0.00 4.04
957 2024 3.243234 ACAATAATGGAGAGAGCGACGAG 60.243 47.826 0.00 0.00 0.00 4.18
958 2025 2.688446 ACAATAATGGAGAGAGCGACGA 59.312 45.455 0.00 0.00 0.00 4.20
959 2026 3.046390 GACAATAATGGAGAGAGCGACG 58.954 50.000 0.00 0.00 0.00 5.12
960 2027 4.046938 TGACAATAATGGAGAGAGCGAC 57.953 45.455 0.00 0.00 0.00 5.19
961 2028 4.586421 AGATGACAATAATGGAGAGAGCGA 59.414 41.667 0.00 0.00 0.00 4.93
962 2029 4.685165 CAGATGACAATAATGGAGAGAGCG 59.315 45.833 0.00 0.00 0.00 5.03
963 2030 4.451774 GCAGATGACAATAATGGAGAGAGC 59.548 45.833 0.00 0.00 0.00 4.09
964 2031 4.996122 GGCAGATGACAATAATGGAGAGAG 59.004 45.833 0.00 0.00 0.00 3.20
965 2032 4.409901 TGGCAGATGACAATAATGGAGAGA 59.590 41.667 0.00 0.00 0.00 3.10
1015 2085 1.333791 GCTTGAAACACACACTACGGC 60.334 52.381 0.00 0.00 0.00 5.68
1048 2118 3.567797 GGCATCGTCCGCAAGAGC 61.568 66.667 0.00 0.00 43.02 4.09
1072 2142 3.292460 AGGGGTACTGAAGAGAAGATCG 58.708 50.000 0.00 0.00 0.00 3.69
1087 2157 1.153695 AGACTGTCCAGGGAGGGGTA 61.154 60.000 3.76 0.00 38.24 3.69
1135 2205 1.739562 GGTGTGCTGGCTCTTCTCG 60.740 63.158 0.00 0.00 0.00 4.04
1143 2213 1.595093 GGTAATGGTGGTGTGCTGGC 61.595 60.000 0.00 0.00 0.00 4.85
1146 2216 1.002624 CCGGTAATGGTGGTGTGCT 60.003 57.895 0.00 0.00 0.00 4.40
1183 2256 2.676839 GTGAACTGACCTCATGATGCTG 59.323 50.000 0.00 0.00 0.00 4.41
1188 2261 3.580022 AGACATGTGAACTGACCTCATGA 59.420 43.478 1.15 0.00 39.07 3.07
1214 2287 1.066908 TGCGTTTCTGAAGCTTTTGGG 59.933 47.619 0.00 0.00 0.00 4.12
1219 2292 3.843999 TGTTTTTGCGTTTCTGAAGCTT 58.156 36.364 0.00 0.00 0.00 3.74
1221 2294 2.535574 CCTGTTTTTGCGTTTCTGAAGC 59.464 45.455 0.00 0.00 0.00 3.86
1222 2295 3.115554 CCCTGTTTTTGCGTTTCTGAAG 58.884 45.455 0.00 0.00 0.00 3.02
1232 2305 3.865164 CACAAGAGAAACCCTGTTTTTGC 59.135 43.478 0.00 0.00 0.00 3.68
1242 2315 1.758783 CGCAAAGCACAAGAGAAACC 58.241 50.000 0.00 0.00 0.00 3.27
1338 2411 7.288810 TGTATTTTCCTCTGAGCAAAACAAT 57.711 32.000 8.58 0.00 0.00 2.71
1347 2420 3.797039 TCGCCATGTATTTTCCTCTGAG 58.203 45.455 0.00 0.00 0.00 3.35
1353 2426 3.003689 CACCTCATCGCCATGTATTTTCC 59.996 47.826 0.00 0.00 0.00 3.13
1360 2433 1.746615 GTGCACCTCATCGCCATGT 60.747 57.895 5.22 0.00 0.00 3.21
1361 2434 1.099295 ATGTGCACCTCATCGCCATG 61.099 55.000 15.69 0.00 0.00 3.66
1392 2488 1.967274 GCACTCTCCACTCCCATAGGT 60.967 57.143 0.00 0.00 0.00 3.08
1412 2508 2.093553 CCTGCCTTCTTCCTCTCTTCAG 60.094 54.545 0.00 0.00 0.00 3.02
1565 2661 1.002366 CACGAAATGAAGAGCCGGAG 58.998 55.000 5.05 0.00 0.00 4.63
1566 2662 0.320374 ACACGAAATGAAGAGCCGGA 59.680 50.000 5.05 0.00 0.00 5.14
1568 2664 1.148310 ACACACGAAATGAAGAGCCG 58.852 50.000 0.00 0.00 0.00 5.52
1569 2665 4.631813 AGATTACACACGAAATGAAGAGCC 59.368 41.667 0.00 0.00 0.00 4.70
1570 2666 5.786401 AGATTACACACGAAATGAAGAGC 57.214 39.130 0.00 0.00 0.00 4.09
1571 2667 7.121974 ACAAGATTACACACGAAATGAAGAG 57.878 36.000 0.00 0.00 0.00 2.85
1572 2668 6.147164 GGACAAGATTACACACGAAATGAAGA 59.853 38.462 0.00 0.00 0.00 2.87
1573 2669 6.073276 TGGACAAGATTACACACGAAATGAAG 60.073 38.462 0.00 0.00 0.00 3.02
1578 2679 4.699637 ACTGGACAAGATTACACACGAAA 58.300 39.130 0.00 0.00 0.00 3.46
1604 2705 0.403271 AGGCACAAAGAGCAGGACAT 59.597 50.000 0.00 0.00 0.00 3.06
1606 2707 1.322442 AAAGGCACAAAGAGCAGGAC 58.678 50.000 0.00 0.00 0.00 3.85
1635 2740 6.259387 CCAATTCCATAAAACCGGACTACTAC 59.741 42.308 9.46 0.00 0.00 2.73
1667 2774 2.047213 AAAGACGGCGAGGAACCCAA 62.047 55.000 16.62 0.00 0.00 4.12
1670 2777 0.037975 TACAAAGACGGCGAGGAACC 60.038 55.000 16.62 0.00 0.00 3.62
1672 2779 2.529780 TTTACAAAGACGGCGAGGAA 57.470 45.000 16.62 0.00 0.00 3.36
1685 2792 2.570415 TCGTGGGCCATCTTTTACAA 57.430 45.000 10.70 0.00 0.00 2.41
1697 2804 3.679389 AGATCCATATCAAATCGTGGGC 58.321 45.455 0.00 0.00 34.28 5.36
1753 2864 2.631267 AGCAACAAAGGCCAAAAACTG 58.369 42.857 5.01 0.00 0.00 3.16
1754 2865 3.009026 CAAGCAACAAAGGCCAAAAACT 58.991 40.909 5.01 0.00 0.00 2.66
1755 2866 3.006247 TCAAGCAACAAAGGCCAAAAAC 58.994 40.909 5.01 0.00 0.00 2.43
1756 2867 3.269178 CTCAAGCAACAAAGGCCAAAAA 58.731 40.909 5.01 0.00 0.00 1.94
1757 2868 2.419851 CCTCAAGCAACAAAGGCCAAAA 60.420 45.455 5.01 0.00 0.00 2.44
1758 2869 1.138661 CCTCAAGCAACAAAGGCCAAA 59.861 47.619 5.01 0.00 0.00 3.28
1759 2870 0.752054 CCTCAAGCAACAAAGGCCAA 59.248 50.000 5.01 0.00 0.00 4.52
1760 2871 1.747325 GCCTCAAGCAACAAAGGCCA 61.747 55.000 5.01 0.00 46.97 5.36
1761 2872 1.005748 GCCTCAAGCAACAAAGGCC 60.006 57.895 0.00 0.00 46.97 5.19
1784 2895 2.080693 GGGACATAAACACGATGCACA 58.919 47.619 0.00 0.00 0.00 4.57
1785 2896 1.400494 GGGGACATAAACACGATGCAC 59.600 52.381 0.00 0.00 0.00 4.57
1786 2897 1.280710 AGGGGACATAAACACGATGCA 59.719 47.619 0.00 0.00 0.00 3.96
1791 2911 2.097466 GCATCAAGGGGACATAAACACG 59.903 50.000 0.00 0.00 0.00 4.49
1795 2915 4.314522 TGAAGCATCAAGGGGACATAAA 57.685 40.909 0.00 0.00 30.99 1.40
1798 2918 3.393426 AATGAAGCATCAAGGGGACAT 57.607 42.857 0.00 0.00 39.49 3.06
1800 2920 3.511146 TCAAAATGAAGCATCAAGGGGAC 59.489 43.478 0.00 0.00 39.49 4.46
1820 2940 9.210329 TGATAAAGCGTGAATTTTACTAACTCA 57.790 29.630 0.00 0.00 0.00 3.41
1847 2967 6.176896 ACCAACAAAGGCACAAGTTATTTTT 58.823 32.000 0.00 0.00 0.00 1.94
1853 2973 2.416701 CGAACCAACAAAGGCACAAGTT 60.417 45.455 0.00 0.00 0.00 2.66
1878 2998 3.581755 GACAAACAGCGACTGTACCATA 58.418 45.455 11.92 0.00 44.62 2.74
1889 3010 2.593436 AACCCCCGACAAACAGCG 60.593 61.111 0.00 0.00 0.00 5.18
1920 3041 1.064296 ATCGTCGTCATCGAGTGCC 59.936 57.895 0.00 0.00 46.96 5.01
1921 3042 0.248094 TCATCGTCGTCATCGAGTGC 60.248 55.000 0.00 0.00 46.96 4.40
1922 3043 2.302662 GATCATCGTCGTCATCGAGTG 58.697 52.381 0.00 0.00 46.96 3.51
1923 3044 1.264557 GGATCATCGTCGTCATCGAGT 59.735 52.381 0.00 0.00 46.96 4.18
1924 3045 1.723067 CGGATCATCGTCGTCATCGAG 60.723 57.143 0.00 0.00 46.96 4.04
1925 3046 0.234884 CGGATCATCGTCGTCATCGA 59.765 55.000 0.00 0.00 44.12 3.59
1926 3047 0.041224 ACGGATCATCGTCGTCATCG 60.041 55.000 0.00 0.00 39.34 3.84
1927 3048 1.399572 CACGGATCATCGTCGTCATC 58.600 55.000 0.00 0.00 41.86 2.92
1928 3049 0.030773 CCACGGATCATCGTCGTCAT 59.969 55.000 0.00 0.00 41.86 3.06
1929 3050 1.431845 CCACGGATCATCGTCGTCA 59.568 57.895 0.00 0.00 41.86 4.35
1930 3051 1.299165 CCCACGGATCATCGTCGTC 60.299 63.158 0.00 0.00 41.86 4.20
1931 3052 2.782222 CCCCACGGATCATCGTCGT 61.782 63.158 0.00 0.00 41.86 4.34
1932 3053 2.027605 CCCCACGGATCATCGTCG 59.972 66.667 0.00 0.00 41.86 5.12
1933 3054 1.227263 CACCCCACGGATCATCGTC 60.227 63.158 0.00 0.00 41.86 4.20
1934 3055 2.900273 CACCCCACGGATCATCGT 59.100 61.111 0.00 0.00 44.91 3.73
2003 3124 3.254654 CGCCGTATGTGGAGTGCG 61.255 66.667 0.00 0.00 35.81 5.34
2021 3142 4.704833 CCTGGGTGGCCACGACAG 62.705 72.222 34.81 34.81 37.00 3.51
2030 3151 3.305516 GTGCTTTGCCCTGGGTGG 61.306 66.667 15.56 3.48 0.00 4.61
2031 3152 3.673484 CGTGCTTTGCCCTGGGTG 61.673 66.667 15.56 3.83 0.00 4.61
2032 3153 4.974721 CCGTGCTTTGCCCTGGGT 62.975 66.667 15.56 0.00 0.00 4.51
2033 3154 4.974721 ACCGTGCTTTGCCCTGGG 62.975 66.667 8.86 8.86 0.00 4.45
2034 3155 3.673484 CACCGTGCTTTGCCCTGG 61.673 66.667 0.00 0.00 0.00 4.45
2035 3156 2.133742 CTTCACCGTGCTTTGCCCTG 62.134 60.000 0.00 0.00 0.00 4.45
2083 3204 2.768022 GCCCCTTAGTCCCCATGGG 61.768 68.421 25.30 25.30 46.11 4.00
2084 3205 1.697754 AGCCCCTTAGTCCCCATGG 60.698 63.158 4.14 4.14 0.00 3.66
2085 3206 1.281925 ACAGCCCCTTAGTCCCCATG 61.282 60.000 0.00 0.00 0.00 3.66
2086 3207 0.552615 AACAGCCCCTTAGTCCCCAT 60.553 55.000 0.00 0.00 0.00 4.00
2087 3208 0.774491 AAACAGCCCCTTAGTCCCCA 60.774 55.000 0.00 0.00 0.00 4.96
2088 3209 0.323451 CAAACAGCCCCTTAGTCCCC 60.323 60.000 0.00 0.00 0.00 4.81
2089 3210 0.323451 CCAAACAGCCCCTTAGTCCC 60.323 60.000 0.00 0.00 0.00 4.46
2090 3211 0.696501 TCCAAACAGCCCCTTAGTCC 59.303 55.000 0.00 0.00 0.00 3.85
2091 3212 2.369394 CATCCAAACAGCCCCTTAGTC 58.631 52.381 0.00 0.00 0.00 2.59
2092 3213 1.005924 CCATCCAAACAGCCCCTTAGT 59.994 52.381 0.00 0.00 0.00 2.24
2093 3214 1.005924 ACCATCCAAACAGCCCCTTAG 59.994 52.381 0.00 0.00 0.00 2.18
2094 3215 1.080638 ACCATCCAAACAGCCCCTTA 58.919 50.000 0.00 0.00 0.00 2.69
2095 3216 0.542702 CACCATCCAAACAGCCCCTT 60.543 55.000 0.00 0.00 0.00 3.95
2096 3217 1.077265 CACCATCCAAACAGCCCCT 59.923 57.895 0.00 0.00 0.00 4.79
2097 3218 1.076549 TCACCATCCAAACAGCCCC 59.923 57.895 0.00 0.00 0.00 5.80
2098 3219 1.250840 GGTCACCATCCAAACAGCCC 61.251 60.000 0.00 0.00 0.00 5.19
2099 3220 0.539438 TGGTCACCATCCAAACAGCC 60.539 55.000 0.00 0.00 31.50 4.85
2100 3221 1.000274 GTTGGTCACCATCCAAACAGC 60.000 52.381 0.00 0.00 44.91 4.40
2101 3222 2.034558 GTGTTGGTCACCATCCAAACAG 59.965 50.000 0.00 0.00 44.91 3.16
2102 3223 2.028130 GTGTTGGTCACCATCCAAACA 58.972 47.619 0.00 0.00 44.91 2.83
2103 3224 2.793278 GTGTTGGTCACCATCCAAAC 57.207 50.000 0.00 0.00 44.91 2.93
2112 3233 2.038033 TGGTAAGGCTAGTGTTGGTCAC 59.962 50.000 0.00 0.00 46.46 3.67
2113 3234 2.331166 TGGTAAGGCTAGTGTTGGTCA 58.669 47.619 0.00 0.00 0.00 4.02
2114 3235 3.412237 TTGGTAAGGCTAGTGTTGGTC 57.588 47.619 0.00 0.00 0.00 4.02
2115 3236 3.868619 TTTGGTAAGGCTAGTGTTGGT 57.131 42.857 0.00 0.00 0.00 3.67
2134 3255 0.031449 CGTGGGCGTGACCAATTTTT 59.969 50.000 0.00 0.00 43.34 1.94
2135 3256 0.820074 TCGTGGGCGTGACCAATTTT 60.820 50.000 0.00 0.00 43.34 1.82
2136 3257 0.608035 ATCGTGGGCGTGACCAATTT 60.608 50.000 0.00 0.00 43.34 1.82
2137 3258 0.250793 TATCGTGGGCGTGACCAATT 59.749 50.000 0.00 0.00 43.34 2.32
2138 3259 0.468226 ATATCGTGGGCGTGACCAAT 59.532 50.000 0.00 0.00 43.34 3.16
2139 3260 0.250793 AATATCGTGGGCGTGACCAA 59.749 50.000 0.00 0.00 43.34 3.67
2140 3261 0.250793 AAATATCGTGGGCGTGACCA 59.749 50.000 0.00 0.00 42.05 4.02
2141 3262 0.655733 CAAATATCGTGGGCGTGACC 59.344 55.000 0.00 0.00 39.49 4.02
2142 3263 0.655733 CCAAATATCGTGGGCGTGAC 59.344 55.000 0.00 0.00 39.49 3.67
2143 3264 1.092921 GCCAAATATCGTGGGCGTGA 61.093 55.000 7.35 0.00 36.58 4.35
2144 3265 1.355210 GCCAAATATCGTGGGCGTG 59.645 57.895 7.35 0.00 36.58 5.34
2145 3266 3.821995 GCCAAATATCGTGGGCGT 58.178 55.556 7.35 0.00 36.58 5.68
2147 3268 0.875059 GCTAGCCAAATATCGTGGGC 59.125 55.000 2.29 0.00 46.77 5.36
2148 3269 1.148310 CGCTAGCCAAATATCGTGGG 58.852 55.000 9.66 0.00 36.58 4.61
2149 3270 1.865865 ACGCTAGCCAAATATCGTGG 58.134 50.000 9.66 1.70 39.33 4.94
2150 3271 3.546020 CCAAACGCTAGCCAAATATCGTG 60.546 47.826 9.66 0.00 28.85 4.35
2151 3272 2.612212 CCAAACGCTAGCCAAATATCGT 59.388 45.455 9.66 0.00 0.00 3.73
2152 3273 2.612212 ACCAAACGCTAGCCAAATATCG 59.388 45.455 9.66 0.00 0.00 2.92
2153 3274 3.877508 AGACCAAACGCTAGCCAAATATC 59.122 43.478 9.66 0.83 0.00 1.63
2154 3275 3.627577 CAGACCAAACGCTAGCCAAATAT 59.372 43.478 9.66 0.00 0.00 1.28
2155 3276 3.006940 CAGACCAAACGCTAGCCAAATA 58.993 45.455 9.66 0.00 0.00 1.40
2156 3277 1.812571 CAGACCAAACGCTAGCCAAAT 59.187 47.619 9.66 0.00 0.00 2.32
2157 3278 1.234821 CAGACCAAACGCTAGCCAAA 58.765 50.000 9.66 0.00 0.00 3.28
2158 3279 0.605319 CCAGACCAAACGCTAGCCAA 60.605 55.000 9.66 0.00 0.00 4.52
2159 3280 1.003839 CCAGACCAAACGCTAGCCA 60.004 57.895 9.66 0.00 0.00 4.75
2160 3281 0.248289 TACCAGACCAAACGCTAGCC 59.752 55.000 9.66 0.00 0.00 3.93
2161 3282 1.356938 GTACCAGACCAAACGCTAGC 58.643 55.000 4.06 4.06 0.00 3.42
2172 3293 2.161609 CGAGCCAAAAATGGTACCAGAC 59.838 50.000 21.41 0.00 0.00 3.51
2173 3294 2.432444 CGAGCCAAAAATGGTACCAGA 58.568 47.619 21.41 0.00 0.00 3.86
2174 3295 1.135402 GCGAGCCAAAAATGGTACCAG 60.135 52.381 21.41 6.47 0.00 4.00
2175 3296 0.885196 GCGAGCCAAAAATGGTACCA 59.115 50.000 18.99 18.99 0.00 3.25
2176 3297 0.172578 GGCGAGCCAAAAATGGTACC 59.827 55.000 9.58 4.43 35.81 3.34
2177 3298 0.885196 TGGCGAGCCAAAAATGGTAC 59.115 50.000 15.24 0.00 44.12 3.34
2178 3299 3.348151 TGGCGAGCCAAAAATGGTA 57.652 47.368 15.24 0.00 44.12 3.25
2179 3300 4.189539 TGGCGAGCCAAAAATGGT 57.810 50.000 15.24 0.00 44.12 3.55
2188 3309 3.701604 AAGTCGACGATGGCGAGCC 62.702 63.158 10.46 7.26 41.64 4.70
2189 3310 2.202623 AAGTCGACGATGGCGAGC 60.203 61.111 10.46 0.00 41.64 5.03
2190 3311 1.874019 CCAAGTCGACGATGGCGAG 60.874 63.158 24.22 7.09 41.64 5.03
2191 3312 2.180769 CCAAGTCGACGATGGCGA 59.819 61.111 24.22 0.00 41.64 5.54
2192 3313 2.885644 CCCAAGTCGACGATGGCG 60.886 66.667 28.00 20.22 44.79 5.69
2193 3314 3.195698 GCCCAAGTCGACGATGGC 61.196 66.667 28.00 25.57 32.71 4.40
2194 3315 2.885644 CGCCCAAGTCGACGATGG 60.886 66.667 27.02 27.02 0.00 3.51
2195 3316 3.554692 GCGCCCAAGTCGACGATG 61.555 66.667 10.46 13.19 0.00 3.84
2219 3340 0.162294 CGAGTTGGCGAAAACGGTAC 59.838 55.000 0.00 0.00 35.13 3.34
2220 3341 1.559149 GCGAGTTGGCGAAAACGGTA 61.559 55.000 9.59 0.00 35.13 4.02
2221 3342 2.888998 GCGAGTTGGCGAAAACGGT 61.889 57.895 9.59 0.00 35.13 4.83
2222 3343 2.127383 GCGAGTTGGCGAAAACGG 60.127 61.111 9.59 0.00 35.13 4.44
2244 3365 3.322706 ATTTCCGCGCCGCTGTTTC 62.323 57.895 7.78 0.00 0.00 2.78
2245 3366 3.322706 GATTTCCGCGCCGCTGTTT 62.323 57.895 7.78 0.00 0.00 2.83
2246 3367 3.799755 GATTTCCGCGCCGCTGTT 61.800 61.111 7.78 0.00 0.00 3.16
2248 3369 4.228097 CTGATTTCCGCGCCGCTG 62.228 66.667 7.78 0.00 0.00 5.18
2257 3378 3.733443 ATATTTTGGCGGCTGATTTCC 57.267 42.857 11.43 0.00 0.00 3.13
2258 3379 3.803778 CCAATATTTTGGCGGCTGATTTC 59.196 43.478 11.43 0.00 45.71 2.17
2259 3380 3.795877 CCAATATTTTGGCGGCTGATTT 58.204 40.909 11.43 0.00 45.71 2.17
2260 3381 3.457610 CCAATATTTTGGCGGCTGATT 57.542 42.857 11.43 0.00 45.71 2.57
2269 3390 6.428992 CCAGATTTGGCAGCCAATATTTTGG 61.429 44.000 27.89 22.55 45.45 3.28
2270 3391 4.573201 CCAGATTTGGCAGCCAATATTTTG 59.427 41.667 27.89 18.44 43.55 2.44
2271 3392 4.773013 CCAGATTTGGCAGCCAATATTTT 58.227 39.130 27.89 10.35 43.55 1.82
2272 3393 4.411256 CCAGATTTGGCAGCCAATATTT 57.589 40.909 27.89 15.19 43.55 1.40
2296 3417 2.369257 ATATCACGGTGGCTGGCTCG 62.369 60.000 8.50 13.57 0.00 5.03
2297 3418 0.679505 TATATCACGGTGGCTGGCTC 59.320 55.000 8.50 0.00 0.00 4.70
2298 3419 1.128200 TTATATCACGGTGGCTGGCT 58.872 50.000 8.50 0.00 0.00 4.75
2299 3420 1.961793 TTTATATCACGGTGGCTGGC 58.038 50.000 8.50 0.00 0.00 4.85
2300 3421 2.878406 CCTTTTATATCACGGTGGCTGG 59.122 50.000 8.50 0.00 0.00 4.85
2301 3422 2.290641 GCCTTTTATATCACGGTGGCTG 59.709 50.000 8.50 0.00 36.52 4.85
2302 3423 2.092646 TGCCTTTTATATCACGGTGGCT 60.093 45.455 8.50 0.00 39.77 4.75
2303 3424 2.032924 GTGCCTTTTATATCACGGTGGC 59.967 50.000 8.50 0.72 39.53 5.01
2304 3425 2.286833 CGTGCCTTTTATATCACGGTGG 59.713 50.000 8.50 0.00 45.76 4.61
2305 3426 3.585748 CGTGCCTTTTATATCACGGTG 57.414 47.619 0.56 0.56 45.76 4.94
2309 3430 8.856490 AAAATCAATCGTGCCTTTTATATCAC 57.144 30.769 0.00 0.00 0.00 3.06
2310 3431 9.515020 GAAAAATCAATCGTGCCTTTTATATCA 57.485 29.630 0.00 0.00 0.00 2.15
2311 3432 8.968242 GGAAAAATCAATCGTGCCTTTTATATC 58.032 33.333 0.00 0.00 0.00 1.63
2312 3433 7.926018 GGGAAAAATCAATCGTGCCTTTTATAT 59.074 33.333 0.00 0.00 0.00 0.86
2313 3434 7.262048 GGGAAAAATCAATCGTGCCTTTTATA 58.738 34.615 0.00 0.00 0.00 0.98
2314 3435 6.106003 GGGAAAAATCAATCGTGCCTTTTAT 58.894 36.000 0.00 0.00 0.00 1.40
2315 3436 5.474825 GGGAAAAATCAATCGTGCCTTTTA 58.525 37.500 0.00 0.00 0.00 1.52
2316 3437 4.314961 GGGAAAAATCAATCGTGCCTTTT 58.685 39.130 0.00 0.00 0.00 2.27
2317 3438 3.306710 GGGGAAAAATCAATCGTGCCTTT 60.307 43.478 0.00 0.00 0.00 3.11
2318 3439 2.233676 GGGGAAAAATCAATCGTGCCTT 59.766 45.455 0.00 0.00 0.00 4.35
2319 3440 1.824852 GGGGAAAAATCAATCGTGCCT 59.175 47.619 0.00 0.00 0.00 4.75
2320 3441 1.548269 TGGGGAAAAATCAATCGTGCC 59.452 47.619 0.00 0.00 0.00 5.01
2321 3442 2.606108 GTGGGGAAAAATCAATCGTGC 58.394 47.619 0.00 0.00 0.00 5.34
2322 3443 2.825532 AGGTGGGGAAAAATCAATCGTG 59.174 45.455 0.00 0.00 0.00 4.35
2323 3444 2.825532 CAGGTGGGGAAAAATCAATCGT 59.174 45.455 0.00 0.00 0.00 3.73
2324 3445 2.825532 ACAGGTGGGGAAAAATCAATCG 59.174 45.455 0.00 0.00 0.00 3.34
2325 3446 4.618227 CGAACAGGTGGGGAAAAATCAATC 60.618 45.833 0.00 0.00 0.00 2.67
2326 3447 3.258123 CGAACAGGTGGGGAAAAATCAAT 59.742 43.478 0.00 0.00 0.00 2.57
2327 3448 2.625790 CGAACAGGTGGGGAAAAATCAA 59.374 45.455 0.00 0.00 0.00 2.57
2328 3449 2.235016 CGAACAGGTGGGGAAAAATCA 58.765 47.619 0.00 0.00 0.00 2.57
2329 3450 1.067846 GCGAACAGGTGGGGAAAAATC 60.068 52.381 0.00 0.00 0.00 2.17
2330 3451 0.966179 GCGAACAGGTGGGGAAAAAT 59.034 50.000 0.00 0.00 0.00 1.82
2331 3452 1.110518 GGCGAACAGGTGGGGAAAAA 61.111 55.000 0.00 0.00 0.00 1.94
2332 3453 1.529713 GGCGAACAGGTGGGGAAAA 60.530 57.895 0.00 0.00 0.00 2.29
2333 3454 2.114411 GGCGAACAGGTGGGGAAA 59.886 61.111 0.00 0.00 0.00 3.13
2334 3455 3.172106 TGGCGAACAGGTGGGGAA 61.172 61.111 0.00 0.00 0.00 3.97
2335 3456 3.948719 GTGGCGAACAGGTGGGGA 61.949 66.667 0.00 0.00 0.00 4.81
2336 3457 2.976494 AAAGTGGCGAACAGGTGGGG 62.976 60.000 0.00 0.00 0.00 4.96
2337 3458 1.515521 GAAAGTGGCGAACAGGTGGG 61.516 60.000 0.00 0.00 0.00 4.61
2338 3459 1.515521 GGAAAGTGGCGAACAGGTGG 61.516 60.000 0.00 0.00 0.00 4.61
2339 3460 1.515521 GGGAAAGTGGCGAACAGGTG 61.516 60.000 0.00 0.00 0.00 4.00
2340 3461 1.228154 GGGAAAGTGGCGAACAGGT 60.228 57.895 0.00 0.00 0.00 4.00
2341 3462 1.971695 GGGGAAAGTGGCGAACAGG 60.972 63.158 0.00 0.00 0.00 4.00
2342 3463 0.609131 ATGGGGAAAGTGGCGAACAG 60.609 55.000 0.00 0.00 0.00 3.16
2343 3464 0.608035 GATGGGGAAAGTGGCGAACA 60.608 55.000 0.00 0.00 0.00 3.18
2344 3465 0.322546 AGATGGGGAAAGTGGCGAAC 60.323 55.000 0.00 0.00 0.00 3.95
2345 3466 0.035439 GAGATGGGGAAAGTGGCGAA 60.035 55.000 0.00 0.00 0.00 4.70
2346 3467 0.909610 AGAGATGGGGAAAGTGGCGA 60.910 55.000 0.00 0.00 0.00 5.54
2347 3468 0.462759 GAGAGATGGGGAAAGTGGCG 60.463 60.000 0.00 0.00 0.00 5.69
2348 3469 0.915364 AGAGAGATGGGGAAAGTGGC 59.085 55.000 0.00 0.00 0.00 5.01
2349 3470 4.657969 AGATAAGAGAGATGGGGAAAGTGG 59.342 45.833 0.00 0.00 0.00 4.00
2350 3471 5.221621 GGAGATAAGAGAGATGGGGAAAGTG 60.222 48.000 0.00 0.00 0.00 3.16
2351 3472 4.904853 GGAGATAAGAGAGATGGGGAAAGT 59.095 45.833 0.00 0.00 0.00 2.66
2352 3473 4.904251 TGGAGATAAGAGAGATGGGGAAAG 59.096 45.833 0.00 0.00 0.00 2.62
2353 3474 4.656112 GTGGAGATAAGAGAGATGGGGAAA 59.344 45.833 0.00 0.00 0.00 3.13
2354 3475 4.227197 GTGGAGATAAGAGAGATGGGGAA 58.773 47.826 0.00 0.00 0.00 3.97
2355 3476 3.752218 CGTGGAGATAAGAGAGATGGGGA 60.752 52.174 0.00 0.00 0.00 4.81
2356 3477 2.560542 CGTGGAGATAAGAGAGATGGGG 59.439 54.545 0.00 0.00 0.00 4.96
2357 3478 2.029470 GCGTGGAGATAAGAGAGATGGG 60.029 54.545 0.00 0.00 0.00 4.00
2358 3479 2.625314 TGCGTGGAGATAAGAGAGATGG 59.375 50.000 0.00 0.00 0.00 3.51
2359 3480 3.067320 TGTGCGTGGAGATAAGAGAGATG 59.933 47.826 0.00 0.00 0.00 2.90
2360 3481 3.291584 TGTGCGTGGAGATAAGAGAGAT 58.708 45.455 0.00 0.00 0.00 2.75
2361 3482 2.685388 CTGTGCGTGGAGATAAGAGAGA 59.315 50.000 0.00 0.00 0.00 3.10
2362 3483 2.685388 TCTGTGCGTGGAGATAAGAGAG 59.315 50.000 0.00 0.00 0.00 3.20
2363 3484 2.723273 TCTGTGCGTGGAGATAAGAGA 58.277 47.619 0.00 0.00 0.00 3.10
2364 3485 3.443037 CTTCTGTGCGTGGAGATAAGAG 58.557 50.000 0.00 0.00 0.00 2.85
2365 3486 2.417379 GCTTCTGTGCGTGGAGATAAGA 60.417 50.000 0.00 0.00 0.00 2.10
2366 3487 1.929836 GCTTCTGTGCGTGGAGATAAG 59.070 52.381 0.00 0.00 0.00 1.73
2367 3488 2.010145 GCTTCTGTGCGTGGAGATAA 57.990 50.000 0.00 0.00 0.00 1.75
2368 3489 3.741029 GCTTCTGTGCGTGGAGATA 57.259 52.632 0.00 0.00 0.00 1.98
2369 3490 4.606071 GCTTCTGTGCGTGGAGAT 57.394 55.556 0.00 0.00 0.00 2.75
2378 3499 0.869454 GGATCGAGAGCGCTTCTGTG 60.869 60.000 13.26 5.47 35.87 3.66
2379 3500 1.315981 TGGATCGAGAGCGCTTCTGT 61.316 55.000 13.26 0.00 35.87 3.41
2380 3501 0.179127 TTGGATCGAGAGCGCTTCTG 60.179 55.000 13.26 4.11 35.87 3.02
2381 3502 0.749649 ATTGGATCGAGAGCGCTTCT 59.250 50.000 13.26 10.52 39.43 2.85
2382 3503 1.135867 GATTGGATCGAGAGCGCTTC 58.864 55.000 13.26 10.44 37.46 3.86
2383 3504 0.461548 TGATTGGATCGAGAGCGCTT 59.538 50.000 13.26 0.58 37.46 4.68
2384 3505 0.249238 GTGATTGGATCGAGAGCGCT 60.249 55.000 11.27 11.27 37.46 5.92
2385 3506 1.218230 GGTGATTGGATCGAGAGCGC 61.218 60.000 0.00 0.00 37.46 5.92
2386 3507 0.936764 CGGTGATTGGATCGAGAGCG 60.937 60.000 0.00 0.00 39.35 5.03
2387 3508 0.598680 CCGGTGATTGGATCGAGAGC 60.599 60.000 0.00 0.00 0.00 4.09
2388 3509 0.032678 CCCGGTGATTGGATCGAGAG 59.967 60.000 0.00 0.00 0.00 3.20
2389 3510 2.028125 GCCCGGTGATTGGATCGAGA 62.028 60.000 0.00 0.00 0.00 4.04
2390 3511 1.595382 GCCCGGTGATTGGATCGAG 60.595 63.158 0.00 0.00 0.00 4.04
2391 3512 2.504032 GCCCGGTGATTGGATCGA 59.496 61.111 0.00 0.00 0.00 3.59
2392 3513 2.967076 CGCCCGGTGATTGGATCG 60.967 66.667 0.00 0.00 0.00 3.69
2393 3514 2.591715 CCGCCCGGTGATTGGATC 60.592 66.667 0.00 0.00 0.00 3.36
2394 3515 4.875713 GCCGCCCGGTGATTGGAT 62.876 66.667 8.66 0.00 37.65 3.41
2415 3536 3.414700 CTGGCACCGACGCAGAAC 61.415 66.667 0.00 0.00 0.00 3.01
2421 3542 2.811317 GAGAAGCTGGCACCGACG 60.811 66.667 0.00 0.00 0.00 5.12
2422 3543 2.435059 GGAGAAGCTGGCACCGAC 60.435 66.667 0.00 0.00 0.00 4.79
2423 3544 4.069232 CGGAGAAGCTGGCACCGA 62.069 66.667 16.97 0.00 45.31 4.69
2456 3577 3.691744 GAGAGGTGGAGCAGCGTCG 62.692 68.421 0.00 0.00 36.92 5.12
2457 3578 2.183046 GAGAGGTGGAGCAGCGTC 59.817 66.667 0.00 0.00 36.92 5.19
2458 3579 3.753434 CGAGAGGTGGAGCAGCGT 61.753 66.667 0.00 0.00 36.92 5.07
2460 3581 4.828925 GGCGAGAGGTGGAGCAGC 62.829 72.222 0.00 0.00 0.00 5.25
2461 3582 4.154347 GGGCGAGAGGTGGAGCAG 62.154 72.222 0.00 0.00 0.00 4.24
2462 3583 4.704103 AGGGCGAGAGGTGGAGCA 62.704 66.667 0.00 0.00 0.00 4.26
2463 3584 3.844090 GAGGGCGAGAGGTGGAGC 61.844 72.222 0.00 0.00 0.00 4.70
2464 3585 3.151022 GGAGGGCGAGAGGTGGAG 61.151 72.222 0.00 0.00 0.00 3.86
2465 3586 3.663815 GAGGAGGGCGAGAGGTGGA 62.664 68.421 0.00 0.00 0.00 4.02
2466 3587 3.151022 GAGGAGGGCGAGAGGTGG 61.151 72.222 0.00 0.00 0.00 4.61
2467 3588 2.043450 AGAGGAGGGCGAGAGGTG 60.043 66.667 0.00 0.00 0.00 4.00
2468 3589 2.277404 GAGAGGAGGGCGAGAGGT 59.723 66.667 0.00 0.00 0.00 3.85
2469 3590 2.520741 GGAGAGGAGGGCGAGAGG 60.521 72.222 0.00 0.00 0.00 3.69
2470 3591 2.520741 GGGAGAGGAGGGCGAGAG 60.521 72.222 0.00 0.00 0.00 3.20
2471 3592 3.347590 TGGGAGAGGAGGGCGAGA 61.348 66.667 0.00 0.00 0.00 4.04
2472 3593 2.837291 CTGGGAGAGGAGGGCGAG 60.837 72.222 0.00 0.00 0.00 5.03
2473 3594 3.663815 GACTGGGAGAGGAGGGCGA 62.664 68.421 0.00 0.00 0.00 5.54
2474 3595 3.151022 GACTGGGAGAGGAGGGCG 61.151 72.222 0.00 0.00 0.00 6.13
2475 3596 1.613630 TTGACTGGGAGAGGAGGGC 60.614 63.158 0.00 0.00 0.00 5.19
2476 3597 1.621672 GCTTGACTGGGAGAGGAGGG 61.622 65.000 0.00 0.00 0.00 4.30
2477 3598 0.617249 AGCTTGACTGGGAGAGGAGG 60.617 60.000 0.00 0.00 0.00 4.30
2478 3599 1.754226 GTAGCTTGACTGGGAGAGGAG 59.246 57.143 0.00 0.00 0.00 3.69
2479 3600 1.853963 GTAGCTTGACTGGGAGAGGA 58.146 55.000 0.00 0.00 0.00 3.71
2480 3601 0.457851 CGTAGCTTGACTGGGAGAGG 59.542 60.000 0.00 0.00 0.00 3.69
2495 3616 1.153549 GGCTGACCTTGGAGCGTAG 60.154 63.158 0.00 0.00 35.95 3.51
2496 3617 1.911269 TGGCTGACCTTGGAGCGTA 60.911 57.895 0.00 0.00 35.95 4.42
2497 3618 3.241530 TGGCTGACCTTGGAGCGT 61.242 61.111 0.00 0.00 35.95 5.07
2498 3619 2.743928 GTGGCTGACCTTGGAGCG 60.744 66.667 0.00 0.00 35.95 5.03
2499 3620 1.673665 CAGTGGCTGACCTTGGAGC 60.674 63.158 0.00 0.00 36.63 4.70
2500 3621 0.397941 TTCAGTGGCTGACCTTGGAG 59.602 55.000 0.00 0.00 40.46 3.86
2501 3622 0.843309 TTTCAGTGGCTGACCTTGGA 59.157 50.000 0.00 0.00 40.46 3.53
2502 3623 1.815003 GATTTCAGTGGCTGACCTTGG 59.185 52.381 0.00 0.00 40.46 3.61
2503 3624 1.815003 GGATTTCAGTGGCTGACCTTG 59.185 52.381 0.00 0.00 40.46 3.61
2504 3625 1.272147 GGGATTTCAGTGGCTGACCTT 60.272 52.381 0.00 0.00 40.46 3.50
2505 3626 0.329596 GGGATTTCAGTGGCTGACCT 59.670 55.000 0.00 0.00 40.46 3.85
2506 3627 0.681243 GGGGATTTCAGTGGCTGACC 60.681 60.000 0.00 0.00 40.46 4.02
2507 3628 0.038166 TGGGGATTTCAGTGGCTGAC 59.962 55.000 0.00 0.00 40.46 3.51
2508 3629 1.002069 ATGGGGATTTCAGTGGCTGA 58.998 50.000 0.00 0.00 38.87 4.26
2509 3630 1.396653 GATGGGGATTTCAGTGGCTG 58.603 55.000 0.00 0.00 0.00 4.85
2510 3631 0.259938 GGATGGGGATTTCAGTGGCT 59.740 55.000 0.00 0.00 0.00 4.75
2511 3632 0.033208 TGGATGGGGATTTCAGTGGC 60.033 55.000 0.00 0.00 0.00 5.01
2512 3633 2.102578 GTTGGATGGGGATTTCAGTGG 58.897 52.381 0.00 0.00 0.00 4.00
2513 3634 2.493278 GTGTTGGATGGGGATTTCAGTG 59.507 50.000 0.00 0.00 0.00 3.66
2514 3635 2.379907 AGTGTTGGATGGGGATTTCAGT 59.620 45.455 0.00 0.00 0.00 3.41
2515 3636 3.091633 AGTGTTGGATGGGGATTTCAG 57.908 47.619 0.00 0.00 0.00 3.02
2516 3637 3.591527 AGTAGTGTTGGATGGGGATTTCA 59.408 43.478 0.00 0.00 0.00 2.69
2517 3638 4.200092 GAGTAGTGTTGGATGGGGATTTC 58.800 47.826 0.00 0.00 0.00 2.17
2518 3639 3.053619 GGAGTAGTGTTGGATGGGGATTT 60.054 47.826 0.00 0.00 0.00 2.17
2519 3640 2.509964 GGAGTAGTGTTGGATGGGGATT 59.490 50.000 0.00 0.00 0.00 3.01
2520 3641 2.127708 GGAGTAGTGTTGGATGGGGAT 58.872 52.381 0.00 0.00 0.00 3.85
2521 3642 1.580059 GGAGTAGTGTTGGATGGGGA 58.420 55.000 0.00 0.00 0.00 4.81
2522 3643 0.178068 CGGAGTAGTGTTGGATGGGG 59.822 60.000 0.00 0.00 0.00 4.96
2523 3644 1.191535 TCGGAGTAGTGTTGGATGGG 58.808 55.000 0.00 0.00 0.00 4.00
2524 3645 2.224066 GGATCGGAGTAGTGTTGGATGG 60.224 54.545 0.00 0.00 0.00 3.51
2525 3646 2.224066 GGGATCGGAGTAGTGTTGGATG 60.224 54.545 0.00 0.00 0.00 3.51
2526 3647 2.040178 GGGATCGGAGTAGTGTTGGAT 58.960 52.381 0.00 0.00 0.00 3.41
2527 3648 1.481871 GGGATCGGAGTAGTGTTGGA 58.518 55.000 0.00 0.00 0.00 3.53
2528 3649 0.464452 GGGGATCGGAGTAGTGTTGG 59.536 60.000 0.00 0.00 0.00 3.77
2529 3650 1.486211 AGGGGATCGGAGTAGTGTTG 58.514 55.000 0.00 0.00 0.00 3.33
2530 3651 2.249309 AAGGGGATCGGAGTAGTGTT 57.751 50.000 0.00 0.00 0.00 3.32
2531 3652 2.249309 AAAGGGGATCGGAGTAGTGT 57.751 50.000 0.00 0.00 0.00 3.55
2532 3653 2.766828 AGAAAAGGGGATCGGAGTAGTG 59.233 50.000 0.00 0.00 0.00 2.74
2533 3654 3.117552 AGAAAAGGGGATCGGAGTAGT 57.882 47.619 0.00 0.00 0.00 2.73
2534 3655 4.021016 CCATAGAAAAGGGGATCGGAGTAG 60.021 50.000 0.00 0.00 0.00 2.57
2535 3656 3.901844 CCATAGAAAAGGGGATCGGAGTA 59.098 47.826 0.00 0.00 0.00 2.59
2536 3657 2.706190 CCATAGAAAAGGGGATCGGAGT 59.294 50.000 0.00 0.00 0.00 3.85
2537 3658 3.409026 CCATAGAAAAGGGGATCGGAG 57.591 52.381 0.00 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.