Multiple sequence alignment - TraesCS2B01G525700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G525700 chr2B 100.000 2318 0 0 1 2318 719798912 719796595 0.000000e+00 4281.0
1 TraesCS2B01G525700 chr2D 86.422 1333 121 36 833 2128 593355374 593356683 0.000000e+00 1404.0
2 TraesCS2B01G525700 chr5B 92.606 541 29 6 1 538 619098477 619099009 0.000000e+00 767.0
3 TraesCS2B01G525700 chr5B 91.867 541 30 8 1 539 619122666 619123194 0.000000e+00 743.0
4 TraesCS2B01G525700 chr5B 95.911 269 10 1 543 810 459570866 459571134 3.540000e-118 435.0
5 TraesCS2B01G525700 chr2A 86.809 561 34 12 873 1404 728360551 728360002 7.130000e-165 590.0
6 TraesCS2B01G525700 chr2A 79.664 595 85 20 1580 2145 728359687 728359100 1.670000e-106 396.0
7 TraesCS2B01G525700 chr2A 97.143 35 1 0 287 321 713687022 713686988 2.490000e-05 60.2
8 TraesCS2B01G525700 chr7A 95.911 269 10 1 543 810 627156440 627156708 3.540000e-118 435.0
9 TraesCS2B01G525700 chr6A 95.896 268 10 1 543 809 38758084 38757817 1.270000e-117 433.0
10 TraesCS2B01G525700 chr3A 95.896 268 10 1 543 809 481022578 481022845 1.270000e-117 433.0
11 TraesCS2B01G525700 chr3A 95.556 270 10 2 543 810 52445105 52445374 4.580000e-117 431.0
12 TraesCS2B01G525700 chr3B 95.238 273 11 2 539 810 11541423 11541152 4.580000e-117 431.0
13 TraesCS2B01G525700 chrUn 95.539 269 11 1 543 810 13888281 13888549 1.650000e-116 429.0
14 TraesCS2B01G525700 chr6B 95.221 272 12 1 543 813 143176375 143176104 1.650000e-116 429.0
15 TraesCS2B01G525700 chr6B 93.220 295 14 6 543 832 347118513 347118220 1.650000e-116 429.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G525700 chr2B 719796595 719798912 2317 True 4281 4281 100.0000 1 2318 1 chr2B.!!$R1 2317
1 TraesCS2B01G525700 chr2D 593355374 593356683 1309 False 1404 1404 86.4220 833 2128 1 chr2D.!!$F1 1295
2 TraesCS2B01G525700 chr5B 619098477 619099009 532 False 767 767 92.6060 1 538 1 chr5B.!!$F2 537
3 TraesCS2B01G525700 chr5B 619122666 619123194 528 False 743 743 91.8670 1 539 1 chr5B.!!$F3 538
4 TraesCS2B01G525700 chr2A 728359100 728360551 1451 True 493 590 83.2365 873 2145 2 chr2A.!!$R2 1272

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
668 673 0.034756 CCGGAACATCACACACTCCA 59.965 55.0 0.0 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1637 1825 0.029035 CGTCGACCGGAAGTATCAGG 59.971 60.0 9.46 0.0 45.42 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.692749 TGCTCCCCTAATTCCGCCT 60.693 57.895 0.00 0.00 0.00 5.52
105 106 1.353694 GATTGAGATCCTGGGATGGGG 59.646 57.143 6.88 0.00 34.60 4.96
137 138 0.535335 GATGACAACCCTAGGCACGA 59.465 55.000 2.05 0.00 0.00 4.35
193 194 2.098443 GGAGAAGAGAAGTACCTGCTCG 59.902 54.545 0.00 0.00 40.92 5.03
228 229 1.735386 TGACGAGAAGGAGACCTACG 58.265 55.000 0.00 0.00 31.13 3.51
268 269 2.338984 GCAGACACGGTCGAGGTT 59.661 61.111 0.00 0.00 37.67 3.50
539 544 1.381928 TACGCAACCTAGCTCCCTCG 61.382 60.000 0.00 0.00 0.00 4.63
540 545 2.501610 GCAACCTAGCTCCCTCGG 59.498 66.667 0.00 0.00 0.00 4.63
541 546 2.501610 CAACCTAGCTCCCTCGGC 59.498 66.667 0.00 0.00 0.00 5.54
542 547 2.060980 CAACCTAGCTCCCTCGGCT 61.061 63.158 0.00 0.00 43.02 5.52
543 548 1.758906 AACCTAGCTCCCTCGGCTC 60.759 63.158 0.00 0.00 40.74 4.70
544 549 2.123683 CCTAGCTCCCTCGGCTCA 60.124 66.667 0.00 0.00 40.74 4.26
545 550 2.494530 CCTAGCTCCCTCGGCTCAC 61.495 68.421 0.00 0.00 40.74 3.51
546 551 1.754621 CTAGCTCCCTCGGCTCACA 60.755 63.158 0.00 0.00 40.74 3.58
547 552 1.304962 TAGCTCCCTCGGCTCACAA 60.305 57.895 0.00 0.00 40.74 3.33
548 553 0.687757 TAGCTCCCTCGGCTCACAAT 60.688 55.000 0.00 0.00 40.74 2.71
549 554 1.817099 GCTCCCTCGGCTCACAATG 60.817 63.158 0.00 0.00 0.00 2.82
550 555 1.900351 CTCCCTCGGCTCACAATGA 59.100 57.895 0.00 0.00 0.00 2.57
551 556 0.179089 CTCCCTCGGCTCACAATGAG 60.179 60.000 1.29 1.29 46.90 2.90
564 569 5.667539 TCACAATGAGAGGAACTTAGGAG 57.332 43.478 0.00 0.00 41.55 3.69
565 570 5.087323 TCACAATGAGAGGAACTTAGGAGT 58.913 41.667 0.00 0.00 41.55 3.85
566 571 6.253758 TCACAATGAGAGGAACTTAGGAGTA 58.746 40.000 0.00 0.00 41.55 2.59
567 572 6.724441 TCACAATGAGAGGAACTTAGGAGTAA 59.276 38.462 0.00 0.00 41.55 2.24
568 573 7.400339 TCACAATGAGAGGAACTTAGGAGTAAT 59.600 37.037 0.00 0.00 41.55 1.89
569 574 8.696374 CACAATGAGAGGAACTTAGGAGTAATA 58.304 37.037 0.00 0.00 41.55 0.98
570 575 9.440761 ACAATGAGAGGAACTTAGGAGTAATAT 57.559 33.333 0.00 0.00 41.55 1.28
571 576 9.921637 CAATGAGAGGAACTTAGGAGTAATATC 57.078 37.037 0.00 0.00 41.55 1.63
572 577 9.661954 AATGAGAGGAACTTAGGAGTAATATCA 57.338 33.333 0.00 0.00 41.55 2.15
573 578 8.466617 TGAGAGGAACTTAGGAGTAATATCAC 57.533 38.462 0.00 0.00 41.55 3.06
574 579 8.059461 TGAGAGGAACTTAGGAGTAATATCACA 58.941 37.037 0.00 0.00 41.55 3.58
575 580 8.240267 AGAGGAACTTAGGAGTAATATCACAC 57.760 38.462 0.00 0.00 41.55 3.82
576 581 7.839705 AGAGGAACTTAGGAGTAATATCACACA 59.160 37.037 0.00 0.00 41.55 3.72
577 582 7.783042 AGGAACTTAGGAGTAATATCACACAC 58.217 38.462 0.00 0.00 34.21 3.82
578 583 7.620094 AGGAACTTAGGAGTAATATCACACACT 59.380 37.037 0.00 0.00 34.21 3.55
579 584 7.921745 GGAACTTAGGAGTAATATCACACACTC 59.078 40.741 0.00 0.00 34.21 3.51
587 592 8.942338 GAGTAATATCACACACTCCAATACAA 57.058 34.615 0.00 0.00 32.93 2.41
588 593 8.718102 AGTAATATCACACACTCCAATACAAC 57.282 34.615 0.00 0.00 0.00 3.32
589 594 8.540388 AGTAATATCACACACTCCAATACAACT 58.460 33.333 0.00 0.00 0.00 3.16
590 595 9.162764 GTAATATCACACACTCCAATACAACTT 57.837 33.333 0.00 0.00 0.00 2.66
591 596 8.635765 AATATCACACACTCCAATACAACTTT 57.364 30.769 0.00 0.00 0.00 2.66
592 597 5.749596 TCACACACTCCAATACAACTTTG 57.250 39.130 0.00 0.00 0.00 2.77
593 598 4.036262 TCACACACTCCAATACAACTTTGC 59.964 41.667 0.00 0.00 0.00 3.68
594 599 4.036734 CACACACTCCAATACAACTTTGCT 59.963 41.667 0.00 0.00 0.00 3.91
595 600 4.644685 ACACACTCCAATACAACTTTGCTT 59.355 37.500 0.00 0.00 0.00 3.91
596 601 5.825679 ACACACTCCAATACAACTTTGCTTA 59.174 36.000 0.00 0.00 0.00 3.09
597 602 6.490040 ACACACTCCAATACAACTTTGCTTAT 59.510 34.615 0.00 0.00 0.00 1.73
598 603 7.663905 ACACACTCCAATACAACTTTGCTTATA 59.336 33.333 0.00 0.00 0.00 0.98
599 604 8.677300 CACACTCCAATACAACTTTGCTTATAT 58.323 33.333 0.00 0.00 0.00 0.86
600 605 8.677300 ACACTCCAATACAACTTTGCTTATATG 58.323 33.333 0.00 0.00 0.00 1.78
601 606 8.131100 CACTCCAATACAACTTTGCTTATATGG 58.869 37.037 0.00 0.00 0.00 2.74
602 607 7.038154 TCCAATACAACTTTGCTTATATGGC 57.962 36.000 0.00 0.00 0.00 4.40
603 608 6.605194 TCCAATACAACTTTGCTTATATGGCA 59.395 34.615 0.00 0.00 37.97 4.92
604 609 6.697019 CCAATACAACTTTGCTTATATGGCAC 59.303 38.462 0.00 0.00 39.55 5.01
624 629 7.999679 TGGCACATATTTAATGAAAAGAGAGG 58.000 34.615 0.00 0.00 0.00 3.69
625 630 7.615365 TGGCACATATTTAATGAAAAGAGAGGT 59.385 33.333 0.00 0.00 0.00 3.85
626 631 7.917505 GGCACATATTTAATGAAAAGAGAGGTG 59.082 37.037 0.00 0.00 0.00 4.00
627 632 7.433425 GCACATATTTAATGAAAAGAGAGGTGC 59.567 37.037 0.00 0.00 38.03 5.01
628 633 8.680903 CACATATTTAATGAAAAGAGAGGTGCT 58.319 33.333 0.00 0.00 0.00 4.40
629 634 9.247861 ACATATTTAATGAAAAGAGAGGTGCTT 57.752 29.630 0.00 0.00 0.00 3.91
630 635 9.512435 CATATTTAATGAAAAGAGAGGTGCTTG 57.488 33.333 0.00 0.00 0.00 4.01
631 636 6.959639 TTTAATGAAAAGAGAGGTGCTTGT 57.040 33.333 0.00 0.00 0.00 3.16
632 637 4.843220 AATGAAAAGAGAGGTGCTTGTG 57.157 40.909 0.00 0.00 0.00 3.33
633 638 2.575532 TGAAAAGAGAGGTGCTTGTGG 58.424 47.619 0.00 0.00 0.00 4.17
634 639 2.092429 TGAAAAGAGAGGTGCTTGTGGT 60.092 45.455 0.00 0.00 0.00 4.16
635 640 3.135712 TGAAAAGAGAGGTGCTTGTGGTA 59.864 43.478 0.00 0.00 0.00 3.25
636 641 3.857157 AAAGAGAGGTGCTTGTGGTAA 57.143 42.857 0.00 0.00 0.00 2.85
637 642 2.841442 AGAGAGGTGCTTGTGGTAAC 57.159 50.000 0.00 0.00 0.00 2.50
638 643 2.330216 AGAGAGGTGCTTGTGGTAACT 58.670 47.619 0.00 0.00 37.61 2.24
639 644 3.507411 AGAGAGGTGCTTGTGGTAACTA 58.493 45.455 0.00 0.00 37.61 2.24
640 645 3.511934 AGAGAGGTGCTTGTGGTAACTAG 59.488 47.826 0.00 0.00 37.61 2.57
657 662 5.672421 AACTAGCTAAGTTACCGGAACAT 57.328 39.130 9.46 4.03 46.85 2.71
658 663 5.259832 ACTAGCTAAGTTACCGGAACATC 57.740 43.478 9.46 0.00 40.86 3.06
659 664 4.708421 ACTAGCTAAGTTACCGGAACATCA 59.292 41.667 9.46 0.00 40.86 3.07
660 665 3.858247 AGCTAAGTTACCGGAACATCAC 58.142 45.455 9.46 0.66 40.86 3.06
661 666 3.259876 AGCTAAGTTACCGGAACATCACA 59.740 43.478 9.46 0.00 40.86 3.58
662 667 3.370061 GCTAAGTTACCGGAACATCACAC 59.630 47.826 9.46 0.00 40.86 3.82
663 668 3.478857 AAGTTACCGGAACATCACACA 57.521 42.857 9.46 0.00 40.86 3.72
664 669 2.762745 AGTTACCGGAACATCACACAC 58.237 47.619 9.46 0.00 40.86 3.82
665 670 2.367567 AGTTACCGGAACATCACACACT 59.632 45.455 9.46 0.00 40.86 3.55
666 671 2.735134 GTTACCGGAACATCACACACTC 59.265 50.000 9.46 0.00 38.02 3.51
667 672 0.034896 ACCGGAACATCACACACTCC 59.965 55.000 9.46 0.00 0.00 3.85
668 673 0.034756 CCGGAACATCACACACTCCA 59.965 55.000 0.00 0.00 0.00 3.86
669 674 1.542328 CCGGAACATCACACACTCCAA 60.542 52.381 0.00 0.00 0.00 3.53
670 675 2.217750 CGGAACATCACACACTCCAAA 58.782 47.619 0.00 0.00 0.00 3.28
671 676 2.616376 CGGAACATCACACACTCCAAAA 59.384 45.455 0.00 0.00 0.00 2.44
672 677 3.066064 CGGAACATCACACACTCCAAAAA 59.934 43.478 0.00 0.00 0.00 1.94
711 716 8.445275 AACCTAATAAATACATCGTTGCATGA 57.555 30.769 0.00 0.00 0.00 3.07
712 717 8.621532 ACCTAATAAATACATCGTTGCATGAT 57.378 30.769 0.00 0.00 0.00 2.45
713 718 9.719355 ACCTAATAAATACATCGTTGCATGATA 57.281 29.630 0.00 0.00 0.00 2.15
724 729 8.876790 ACATCGTTGCATGATATTACATAGATG 58.123 33.333 0.00 4.97 36.35 2.90
725 730 8.876790 CATCGTTGCATGATATTACATAGATGT 58.123 33.333 0.00 0.08 44.48 3.06
726 731 8.831715 TCGTTGCATGATATTACATAGATGTT 57.168 30.769 0.00 0.00 41.97 2.71
727 732 8.925700 TCGTTGCATGATATTACATAGATGTTC 58.074 33.333 0.00 0.00 41.97 3.18
728 733 8.171196 CGTTGCATGATATTACATAGATGTTCC 58.829 37.037 0.00 0.00 41.97 3.62
729 734 9.224267 GTTGCATGATATTACATAGATGTTCCT 57.776 33.333 0.00 0.00 41.97 3.36
731 736 9.875691 TGCATGATATTACATAGATGTTCCTAC 57.124 33.333 0.00 0.00 41.97 3.18
732 737 9.319143 GCATGATATTACATAGATGTTCCTACC 57.681 37.037 0.00 0.00 41.97 3.18
733 738 9.823647 CATGATATTACATAGATGTTCCTACCC 57.176 37.037 0.00 0.00 41.97 3.69
734 739 8.966155 TGATATTACATAGATGTTCCTACCCA 57.034 34.615 0.00 0.00 41.97 4.51
735 740 8.812972 TGATATTACATAGATGTTCCTACCCAC 58.187 37.037 0.00 0.00 41.97 4.61
736 741 8.974292 ATATTACATAGATGTTCCTACCCACT 57.026 34.615 0.00 0.00 41.97 4.00
738 743 8.974292 ATTACATAGATGTTCCTACCCACTAT 57.026 34.615 0.00 0.00 41.97 2.12
740 745 9.529823 TTACATAGATGTTCCTACCCACTATAG 57.470 37.037 0.00 0.00 41.97 1.31
741 746 7.766628 ACATAGATGTTCCTACCCACTATAGA 58.233 38.462 6.78 0.00 37.90 1.98
742 747 7.891183 ACATAGATGTTCCTACCCACTATAGAG 59.109 40.741 6.78 0.00 37.90 2.43
743 748 5.646215 AGATGTTCCTACCCACTATAGAGG 58.354 45.833 6.78 8.10 0.00 3.69
744 749 4.894252 TGTTCCTACCCACTATAGAGGT 57.106 45.455 18.83 18.83 37.69 3.85
745 750 5.999987 TGTTCCTACCCACTATAGAGGTA 57.000 43.478 19.00 19.00 35.02 3.08
754 759 9.669887 CTACCCACTATAGAGGTAGTAACATAG 57.330 40.741 27.91 14.60 45.39 2.23
755 760 8.054931 ACCCACTATAGAGGTAGTAACATAGT 57.945 38.462 14.29 0.00 33.29 2.12
756 761 8.162746 ACCCACTATAGAGGTAGTAACATAGTC 58.837 40.741 14.29 0.00 33.29 2.59
757 762 8.384718 CCCACTATAGAGGTAGTAACATAGTCT 58.615 40.741 14.29 0.00 33.29 3.24
765 770 8.995577 AGAGGTAGTAACATAGTCTAGAGAAGT 58.004 37.037 0.00 0.00 0.00 3.01
766 771 8.967664 AGGTAGTAACATAGTCTAGAGAAGTG 57.032 38.462 0.00 0.00 0.00 3.16
767 772 8.550585 AGGTAGTAACATAGTCTAGAGAAGTGT 58.449 37.037 0.00 0.00 0.00 3.55
768 773 8.614346 GGTAGTAACATAGTCTAGAGAAGTGTG 58.386 40.741 0.00 0.00 0.00 3.82
769 774 9.165035 GTAGTAACATAGTCTAGAGAAGTGTGT 57.835 37.037 0.00 0.00 0.00 3.72
771 776 9.736414 AGTAACATAGTCTAGAGAAGTGTGTAA 57.264 33.333 0.00 0.00 0.00 2.41
772 777 9.991388 GTAACATAGTCTAGAGAAGTGTGTAAG 57.009 37.037 0.00 0.00 0.00 2.34
773 778 8.638629 AACATAGTCTAGAGAAGTGTGTAAGT 57.361 34.615 0.00 0.00 0.00 2.24
774 779 8.638629 ACATAGTCTAGAGAAGTGTGTAAGTT 57.361 34.615 0.00 0.00 0.00 2.66
775 780 9.736414 ACATAGTCTAGAGAAGTGTGTAAGTTA 57.264 33.333 0.00 0.00 0.00 2.24
776 781 9.991388 CATAGTCTAGAGAAGTGTGTAAGTTAC 57.009 37.037 6.06 6.06 0.00 2.50
777 782 9.962809 ATAGTCTAGAGAAGTGTGTAAGTTACT 57.037 33.333 14.00 0.00 0.00 2.24
779 784 9.439500 AGTCTAGAGAAGTGTGTAAGTTACTAG 57.561 37.037 14.00 4.64 33.80 2.57
780 785 8.177013 GTCTAGAGAAGTGTGTAAGTTACTAGC 58.823 40.741 14.00 5.48 33.22 3.42
781 786 8.102047 TCTAGAGAAGTGTGTAAGTTACTAGCT 58.898 37.037 14.00 6.35 33.22 3.32
782 787 7.527568 AGAGAAGTGTGTAAGTTACTAGCTT 57.472 36.000 14.00 13.25 0.00 3.74
783 788 8.632906 AGAGAAGTGTGTAAGTTACTAGCTTA 57.367 34.615 14.00 0.00 0.00 3.09
784 789 9.245481 AGAGAAGTGTGTAAGTTACTAGCTTAT 57.755 33.333 14.00 11.19 32.01 1.73
785 790 9.291664 GAGAAGTGTGTAAGTTACTAGCTTATG 57.708 37.037 14.00 0.00 32.01 1.90
786 791 8.804204 AGAAGTGTGTAAGTTACTAGCTTATGT 58.196 33.333 14.00 0.00 32.01 2.29
787 792 9.420551 GAAGTGTGTAAGTTACTAGCTTATGTT 57.579 33.333 14.00 0.00 32.01 2.71
788 793 8.983307 AGTGTGTAAGTTACTAGCTTATGTTC 57.017 34.615 14.00 0.00 32.01 3.18
789 794 8.804204 AGTGTGTAAGTTACTAGCTTATGTTCT 58.196 33.333 14.00 0.00 32.01 3.01
790 795 9.420551 GTGTGTAAGTTACTAGCTTATGTTCTT 57.579 33.333 14.00 1.42 32.01 2.52
791 796 9.419297 TGTGTAAGTTACTAGCTTATGTTCTTG 57.581 33.333 14.00 0.00 32.01 3.02
792 797 8.381387 GTGTAAGTTACTAGCTTATGTTCTTGC 58.619 37.037 14.00 3.08 32.01 4.01
793 798 6.986904 AAGTTACTAGCTTATGTTCTTGCC 57.013 37.500 0.00 0.00 0.00 4.52
794 799 5.429130 AGTTACTAGCTTATGTTCTTGCCC 58.571 41.667 0.00 0.00 0.00 5.36
795 800 5.045869 AGTTACTAGCTTATGTTCTTGCCCA 60.046 40.000 0.00 0.00 0.00 5.36
796 801 4.510167 ACTAGCTTATGTTCTTGCCCAT 57.490 40.909 0.00 0.00 0.00 4.00
797 802 4.860022 ACTAGCTTATGTTCTTGCCCATT 58.140 39.130 0.00 0.00 0.00 3.16
798 803 4.641989 ACTAGCTTATGTTCTTGCCCATTG 59.358 41.667 0.00 0.00 0.00 2.82
799 804 3.434309 AGCTTATGTTCTTGCCCATTGT 58.566 40.909 0.00 0.00 0.00 2.71
800 805 3.194116 AGCTTATGTTCTTGCCCATTGTG 59.806 43.478 0.00 0.00 0.00 3.33
801 806 3.193267 GCTTATGTTCTTGCCCATTGTGA 59.807 43.478 0.00 0.00 0.00 3.58
802 807 4.737054 CTTATGTTCTTGCCCATTGTGAC 58.263 43.478 0.00 0.00 0.00 3.67
803 808 1.327303 TGTTCTTGCCCATTGTGACC 58.673 50.000 0.00 0.00 0.00 4.02
804 809 1.327303 GTTCTTGCCCATTGTGACCA 58.673 50.000 0.00 0.00 0.00 4.02
805 810 1.270550 GTTCTTGCCCATTGTGACCAG 59.729 52.381 0.00 0.00 0.00 4.00
806 811 0.895100 TCTTGCCCATTGTGACCAGC 60.895 55.000 0.00 0.00 0.00 4.85
807 812 1.880819 CTTGCCCATTGTGACCAGCC 61.881 60.000 0.00 0.00 0.00 4.85
808 813 2.036256 GCCCATTGTGACCAGCCT 59.964 61.111 0.00 0.00 0.00 4.58
809 814 1.302949 GCCCATTGTGACCAGCCTA 59.697 57.895 0.00 0.00 0.00 3.93
810 815 0.749454 GCCCATTGTGACCAGCCTAG 60.749 60.000 0.00 0.00 0.00 3.02
811 816 0.620556 CCCATTGTGACCAGCCTAGT 59.379 55.000 0.00 0.00 0.00 2.57
812 817 1.679944 CCCATTGTGACCAGCCTAGTG 60.680 57.143 0.00 0.00 0.00 2.74
813 818 1.679944 CCATTGTGACCAGCCTAGTGG 60.680 57.143 0.00 0.00 44.01 4.00
814 819 1.278985 CATTGTGACCAGCCTAGTGGA 59.721 52.381 6.39 0.00 40.44 4.02
815 820 0.976641 TTGTGACCAGCCTAGTGGAG 59.023 55.000 6.39 0.00 40.44 3.86
817 822 1.306141 TGACCAGCCTAGTGGAGGG 60.306 63.158 6.39 0.00 46.81 4.30
818 823 2.689034 ACCAGCCTAGTGGAGGGC 60.689 66.667 6.39 0.00 46.81 5.19
822 827 4.394102 GCCTAGTGGAGGGCCTTA 57.606 61.111 7.89 0.00 46.81 2.69
823 828 1.830836 GCCTAGTGGAGGGCCTTAC 59.169 63.158 7.89 10.80 46.81 2.34
824 829 0.691413 GCCTAGTGGAGGGCCTTACT 60.691 60.000 22.65 22.65 46.81 2.24
825 830 1.880941 CCTAGTGGAGGGCCTTACTT 58.119 55.000 23.76 12.00 42.39 2.24
826 831 1.763545 CCTAGTGGAGGGCCTTACTTC 59.236 57.143 23.76 5.53 42.39 3.01
827 832 2.627217 CCTAGTGGAGGGCCTTACTTCT 60.627 54.545 23.76 16.28 42.39 2.85
828 833 1.574263 AGTGGAGGGCCTTACTTCTC 58.426 55.000 7.89 0.00 34.31 2.87
829 834 0.542333 GTGGAGGGCCTTACTTCTCC 59.458 60.000 7.89 14.69 44.39 3.71
830 835 0.417841 TGGAGGGCCTTACTTCTCCT 59.582 55.000 20.21 0.00 44.43 3.69
831 836 1.124780 GGAGGGCCTTACTTCTCCTC 58.875 60.000 7.89 4.12 41.76 3.71
832 837 1.343580 GGAGGGCCTTACTTCTCCTCT 60.344 57.143 7.89 0.00 42.54 3.69
833 838 1.760029 GAGGGCCTTACTTCTCCTCTG 59.240 57.143 7.89 0.00 40.45 3.35
834 839 0.833949 GGGCCTTACTTCTCCTCTGG 59.166 60.000 0.84 0.00 0.00 3.86
835 840 1.622725 GGGCCTTACTTCTCCTCTGGA 60.623 57.143 0.84 0.00 0.00 3.86
836 841 2.188817 GGCCTTACTTCTCCTCTGGAA 58.811 52.381 0.00 0.00 0.00 3.53
837 842 2.169561 GGCCTTACTTCTCCTCTGGAAG 59.830 54.545 0.00 0.00 43.90 3.46
838 843 2.419436 GCCTTACTTCTCCTCTGGAAGC 60.419 54.545 0.00 0.00 42.58 3.86
839 844 3.103742 CCTTACTTCTCCTCTGGAAGCT 58.896 50.000 0.00 0.00 42.58 3.74
840 845 3.118811 CCTTACTTCTCCTCTGGAAGCTG 60.119 52.174 0.00 0.00 42.58 4.24
841 846 2.317371 ACTTCTCCTCTGGAAGCTGA 57.683 50.000 0.00 0.00 42.58 4.26
842 847 2.614259 ACTTCTCCTCTGGAAGCTGAA 58.386 47.619 0.00 0.00 42.58 3.02
843 848 3.180507 ACTTCTCCTCTGGAAGCTGAAT 58.819 45.455 0.00 0.00 42.58 2.57
861 866 8.579850 AGCTGAATATTACAAAACAATCCTCA 57.420 30.769 0.00 0.00 0.00 3.86
985 999 4.988598 CCACCACCGCGCTCAAGT 62.989 66.667 5.56 0.00 0.00 3.16
1239 1261 2.574399 GAGGAAGACGAAGCCGCT 59.426 61.111 0.00 0.00 39.95 5.52
1299 1321 4.854784 GGCGAGCGCGTCATGAGA 62.855 66.667 10.28 0.00 42.82 3.27
1313 1335 2.159824 TCATGAGAGACGACGAGTTGAC 59.840 50.000 0.00 0.00 0.00 3.18
1325 1347 2.563179 ACGAGTTGACTTGAGCAGGTAT 59.437 45.455 5.41 0.00 0.00 2.73
1330 1352 2.481441 TGACTTGAGCAGGTATGGGAT 58.519 47.619 0.00 0.00 0.00 3.85
1346 1368 3.341629 ATCCCACCTGTGCCCCAG 61.342 66.667 0.00 0.00 41.15 4.45
1351 1373 3.570212 ACCTGTGCCCCAGTGACC 61.570 66.667 0.00 0.00 39.74 4.02
1357 1379 2.220586 TGCCCCAGTGACCGAATCA 61.221 57.895 0.00 0.00 33.79 2.57
1363 1394 3.605634 CCCAGTGACCGAATCATGTTTA 58.394 45.455 0.00 0.00 40.28 2.01
1369 1400 5.523916 AGTGACCGAATCATGTTTATACAGC 59.476 40.000 0.00 0.00 40.28 4.40
1376 1410 7.254761 CCGAATCATGTTTATACAGCAGCTAAA 60.255 37.037 0.00 0.00 37.77 1.85
1425 1459 9.918630 CATGTGAAATCCTGTTATTTTTCTTCT 57.081 29.630 0.00 0.00 0.00 2.85
1427 1461 9.354673 TGTGAAATCCTGTTATTTTTCTTCTCT 57.645 29.630 0.00 0.00 0.00 3.10
1445 1479 3.742882 TCTCTTGAGAGTGCATTTCAACG 59.257 43.478 7.82 0.00 42.60 4.10
1464 1543 5.754406 TCAACGAAGGTTAAAGTCGATTCAA 59.246 36.000 9.83 0.00 38.16 2.69
1485 1564 3.735237 TGATCGAAATAGGCCTCAGTC 57.265 47.619 9.68 3.65 0.00 3.51
1490 1569 1.485066 GAAATAGGCCTCAGTCCGGAA 59.515 52.381 9.68 0.00 0.00 4.30
1512 1664 4.504858 ACTGAATACTCCGGATGTGTTTC 58.495 43.478 3.57 12.86 0.00 2.78
1513 1665 3.517602 TGAATACTCCGGATGTGTTTCG 58.482 45.455 3.57 0.00 0.00 3.46
1514 1666 3.056393 TGAATACTCCGGATGTGTTTCGT 60.056 43.478 3.57 0.00 0.00 3.85
1519 1671 2.742053 CTCCGGATGTGTTTCGTTTCAT 59.258 45.455 3.57 0.00 0.00 2.57
1523 1681 3.720920 CGGATGTGTTTCGTTTCATCGTC 60.721 47.826 0.00 0.00 37.95 4.20
1538 1698 7.463648 CGTTTCATCGTCCTTATCGTGTTAAAT 60.464 37.037 0.00 0.00 0.00 1.40
1539 1699 7.837202 TTCATCGTCCTTATCGTGTTAAATT 57.163 32.000 0.00 0.00 0.00 1.82
1566 1726 9.513727 GTTGTACTAGCTAGTTTATAAGGACAC 57.486 37.037 30.40 18.10 37.73 3.67
1569 1729 7.916077 ACTAGCTAGTTTATAAGGACACCAT 57.084 36.000 20.95 0.00 31.13 3.55
1605 1791 2.039831 TATCCCCTGGCCCCTGTC 60.040 66.667 0.00 0.00 0.00 3.51
1637 1825 6.319141 ACAAACCAGCTCTATTTCAAGTTC 57.681 37.500 0.00 0.00 0.00 3.01
1645 1833 7.271511 CAGCTCTATTTCAAGTTCCTGATACT 58.728 38.462 0.00 0.00 0.00 2.12
1686 1874 3.100671 AGTACATTCTTCTCTTCGGCCT 58.899 45.455 0.00 0.00 0.00 5.19
1709 1897 5.362263 TCTTAAGTATAAACATGGCCGTCC 58.638 41.667 0.00 0.00 0.00 4.79
1712 1900 1.595794 GTATAAACATGGCCGTCCACG 59.404 52.381 0.00 0.00 46.92 4.94
1746 1934 5.059833 GCGTCTTCTATCCATTTCCTTCAT 58.940 41.667 0.00 0.00 0.00 2.57
1760 1948 3.216800 TCCTTCATGGTAGCAATCATGC 58.783 45.455 0.00 0.00 44.25 4.06
1801 1989 4.864726 AGCTAGATTTTGAGCCTTCCAAT 58.135 39.130 0.00 0.00 39.65 3.16
1803 1991 5.359292 AGCTAGATTTTGAGCCTTCCAATTC 59.641 40.000 0.00 0.00 39.65 2.17
1804 1992 5.359292 GCTAGATTTTGAGCCTTCCAATTCT 59.641 40.000 0.00 0.00 32.25 2.40
1805 1993 6.543831 GCTAGATTTTGAGCCTTCCAATTCTA 59.456 38.462 0.00 0.00 32.25 2.10
1806 1994 7.255070 GCTAGATTTTGAGCCTTCCAATTCTAG 60.255 40.741 0.00 1.34 39.32 2.43
1807 1995 5.359292 AGATTTTGAGCCTTCCAATTCTAGC 59.641 40.000 0.00 0.00 0.00 3.42
1808 1996 4.307032 TTTGAGCCTTCCAATTCTAGCT 57.693 40.909 0.00 0.00 0.00 3.32
1809 1997 5.435686 TTTGAGCCTTCCAATTCTAGCTA 57.564 39.130 0.00 0.00 0.00 3.32
1828 2016 3.067742 GCTACGCAAGGTGTAAGGATCTA 59.932 47.826 0.00 0.00 46.39 1.98
1856 2044 5.003160 TGGTGTTCTGAAAGTATGACATGG 58.997 41.667 0.00 0.00 33.76 3.66
1882 2080 3.181483 CCCAAGTTGATGGCATCTTAAGC 60.181 47.826 26.49 10.13 39.26 3.09
1898 2096 4.473196 TCTTAAGCCCATCACACAGGATTA 59.527 41.667 0.00 0.00 30.57 1.75
1899 2097 3.287867 AAGCCCATCACACAGGATTAG 57.712 47.619 0.00 0.00 0.00 1.73
1914 2116 5.103940 ACAGGATTAGTGCTAATGGATGGTT 60.104 40.000 8.96 0.00 36.02 3.67
1919 2121 7.448469 GGATTAGTGCTAATGGATGGTTACATT 59.552 37.037 8.96 0.00 40.21 2.71
1948 2150 5.314718 TCATCCATGTATGGCTGAATCTT 57.685 39.130 13.44 0.00 46.61 2.40
1949 2151 6.438186 TCATCCATGTATGGCTGAATCTTA 57.562 37.500 13.44 0.00 46.61 2.10
1951 2153 7.464273 TCATCCATGTATGGCTGAATCTTAAT 58.536 34.615 13.44 0.00 46.61 1.40
1975 2178 6.505048 TGATATCTCATGAATCACCAACCT 57.495 37.500 3.98 0.00 0.00 3.50
1978 2181 7.835682 TGATATCTCATGAATCACCAACCTTTT 59.164 33.333 3.98 0.00 0.00 2.27
1992 2195 4.058124 CAACCTTTTCTCGAGTCATGTGA 58.942 43.478 13.13 0.00 0.00 3.58
2012 2224 5.778241 TGTGACTTATGAGGTAAGACCAAGA 59.222 40.000 0.00 0.00 41.95 3.02
2024 2236 1.615392 AGACCAAGAGTTGCCATTTGC 59.385 47.619 0.00 0.00 41.77 3.68
2029 2241 3.429822 CCAAGAGTTGCCATTTGCCATAG 60.430 47.826 0.00 0.00 40.16 2.23
2030 2242 2.381911 AGAGTTGCCATTTGCCATAGG 58.618 47.619 0.00 0.00 40.16 2.57
2031 2243 1.410153 GAGTTGCCATTTGCCATAGGG 59.590 52.381 0.00 0.00 40.16 3.53
2094 2310 2.040813 AGCTGGCATTGATCCCGATTAT 59.959 45.455 0.00 0.00 0.00 1.28
2095 2311 2.421424 GCTGGCATTGATCCCGATTATC 59.579 50.000 0.00 0.00 0.00 1.75
2096 2312 3.678289 CTGGCATTGATCCCGATTATCA 58.322 45.455 0.00 0.00 0.00 2.15
2097 2313 4.074259 CTGGCATTGATCCCGATTATCAA 58.926 43.478 8.73 8.73 44.92 2.57
2112 2329 8.504005 CCCGATTATCAAAACATACACTATTCC 58.496 37.037 0.00 0.00 0.00 3.01
2116 2333 8.800370 TTATCAAAACATACACTATTCCTGCA 57.200 30.769 0.00 0.00 0.00 4.41
2132 2349 3.441222 TCCTGCATCAAGTTGTATTGCTG 59.559 43.478 20.54 19.51 34.47 4.41
2134 2351 4.163458 TGCATCAAGTTGTATTGCTGTG 57.837 40.909 20.54 5.46 34.47 3.66
2137 2354 4.155826 GCATCAAGTTGTATTGCTGTGGTA 59.844 41.667 15.89 0.00 30.76 3.25
2149 2366 3.485394 TGCTGTGGTAGAAGCAATTTCA 58.515 40.909 0.00 0.00 46.06 2.69
2150 2367 4.081406 TGCTGTGGTAGAAGCAATTTCAT 58.919 39.130 0.00 0.00 46.06 2.57
2151 2368 5.252547 TGCTGTGGTAGAAGCAATTTCATA 58.747 37.500 0.00 0.00 46.06 2.15
2152 2369 5.355071 TGCTGTGGTAGAAGCAATTTCATAG 59.645 40.000 0.00 0.00 46.06 2.23
2153 2370 5.355350 GCTGTGGTAGAAGCAATTTCATAGT 59.645 40.000 0.00 0.00 39.31 2.12
2154 2371 6.127897 GCTGTGGTAGAAGCAATTTCATAGTT 60.128 38.462 0.00 0.00 39.31 2.24
2155 2372 7.144722 TGTGGTAGAAGCAATTTCATAGTTG 57.855 36.000 0.00 0.00 38.31 3.16
2156 2373 6.714810 TGTGGTAGAAGCAATTTCATAGTTGT 59.285 34.615 0.00 0.00 38.31 3.32
2157 2374 7.023575 GTGGTAGAAGCAATTTCATAGTTGTG 58.976 38.462 0.00 0.00 38.31 3.33
2158 2375 6.030228 GGTAGAAGCAATTTCATAGTTGTGC 58.970 40.000 0.00 0.00 38.31 4.57
2159 2376 5.064441 AGAAGCAATTTCATAGTTGTGCC 57.936 39.130 0.00 0.00 38.31 5.01
2160 2377 4.523943 AGAAGCAATTTCATAGTTGTGCCA 59.476 37.500 0.00 0.00 38.31 4.92
2161 2378 5.186409 AGAAGCAATTTCATAGTTGTGCCAT 59.814 36.000 0.00 0.00 38.31 4.40
2162 2379 5.410355 AGCAATTTCATAGTTGTGCCATT 57.590 34.783 0.00 0.00 32.38 3.16
2163 2380 5.797051 AGCAATTTCATAGTTGTGCCATTT 58.203 33.333 0.00 0.00 32.38 2.32
2164 2381 5.640357 AGCAATTTCATAGTTGTGCCATTTG 59.360 36.000 0.00 0.00 32.38 2.32
2165 2382 5.671825 GCAATTTCATAGTTGTGCCATTTGC 60.672 40.000 0.00 0.00 41.77 3.68
2166 2383 3.591196 TTCATAGTTGTGCCATTTGCC 57.409 42.857 0.00 0.00 40.16 4.52
2167 2384 2.523245 TCATAGTTGTGCCATTTGCCA 58.477 42.857 0.00 0.00 40.16 4.92
2168 2385 3.098377 TCATAGTTGTGCCATTTGCCAT 58.902 40.909 0.00 0.00 40.16 4.40
2169 2386 4.276642 TCATAGTTGTGCCATTTGCCATA 58.723 39.130 0.00 0.00 40.16 2.74
2170 2387 4.097741 TCATAGTTGTGCCATTTGCCATAC 59.902 41.667 0.00 0.00 40.16 2.39
2171 2388 1.202114 AGTTGTGCCATTTGCCATACG 59.798 47.619 0.00 0.00 40.16 3.06
2172 2389 0.529833 TTGTGCCATTTGCCATACGG 59.470 50.000 0.00 0.00 40.16 4.02
2186 2403 2.493035 CATACGGCATGGATAGTTGCA 58.507 47.619 0.00 0.00 40.66 4.08
2187 2404 2.238942 TACGGCATGGATAGTTGCAG 57.761 50.000 0.00 0.00 40.66 4.41
2188 2405 1.097547 ACGGCATGGATAGTTGCAGC 61.098 55.000 0.00 0.00 40.66 5.25
2189 2406 0.816825 CGGCATGGATAGTTGCAGCT 60.817 55.000 8.54 8.54 40.66 4.24
2190 2407 0.666913 GGCATGGATAGTTGCAGCTG 59.333 55.000 14.00 10.11 40.66 4.24
2191 2408 0.666913 GCATGGATAGTTGCAGCTGG 59.333 55.000 17.12 0.00 38.72 4.85
2192 2409 2.020694 GCATGGATAGTTGCAGCTGGT 61.021 52.381 17.12 1.40 38.72 4.00
2193 2410 2.372264 CATGGATAGTTGCAGCTGGTT 58.628 47.619 17.12 0.00 0.00 3.67
2194 2411 2.113860 TGGATAGTTGCAGCTGGTTC 57.886 50.000 17.12 7.30 0.00 3.62
2195 2412 1.350684 TGGATAGTTGCAGCTGGTTCA 59.649 47.619 17.12 4.06 0.00 3.18
2196 2413 2.224744 TGGATAGTTGCAGCTGGTTCAA 60.225 45.455 17.12 8.53 0.00 2.69
2197 2414 2.819608 GGATAGTTGCAGCTGGTTCAAA 59.180 45.455 17.12 0.00 0.00 2.69
2198 2415 3.445096 GGATAGTTGCAGCTGGTTCAAAT 59.555 43.478 17.12 12.74 0.00 2.32
2199 2416 2.806608 AGTTGCAGCTGGTTCAAATG 57.193 45.000 17.12 0.00 0.00 2.32
2200 2417 2.034124 AGTTGCAGCTGGTTCAAATGT 58.966 42.857 17.12 0.00 0.00 2.71
2201 2418 2.035066 AGTTGCAGCTGGTTCAAATGTC 59.965 45.455 17.12 0.00 0.00 3.06
2202 2419 1.689984 TGCAGCTGGTTCAAATGTCA 58.310 45.000 17.12 0.00 0.00 3.58
2203 2420 1.610038 TGCAGCTGGTTCAAATGTCAG 59.390 47.619 17.12 0.00 0.00 3.51
2204 2421 1.610522 GCAGCTGGTTCAAATGTCAGT 59.389 47.619 17.12 0.00 0.00 3.41
2205 2422 2.606308 GCAGCTGGTTCAAATGTCAGTG 60.606 50.000 17.12 0.00 0.00 3.66
2206 2423 2.030540 CAGCTGGTTCAAATGTCAGTGG 60.031 50.000 5.57 0.00 0.00 4.00
2207 2424 2.158623 AGCTGGTTCAAATGTCAGTGGA 60.159 45.455 0.00 0.00 0.00 4.02
2208 2425 2.227388 GCTGGTTCAAATGTCAGTGGAG 59.773 50.000 0.00 0.00 0.00 3.86
2209 2426 3.743521 CTGGTTCAAATGTCAGTGGAGA 58.256 45.455 0.00 0.00 0.00 3.71
2210 2427 4.136796 CTGGTTCAAATGTCAGTGGAGAA 58.863 43.478 0.00 0.00 0.00 2.87
2211 2428 3.882888 TGGTTCAAATGTCAGTGGAGAAC 59.117 43.478 0.00 0.00 34.67 3.01
2212 2429 4.137543 GGTTCAAATGTCAGTGGAGAACT 58.862 43.478 11.02 0.00 40.93 3.01
2223 2440 4.278975 AGTGGAGAACTGGAGATTGAAC 57.721 45.455 0.00 0.00 37.88 3.18
2224 2441 3.008485 AGTGGAGAACTGGAGATTGAACC 59.992 47.826 0.00 0.00 37.88 3.62
2225 2442 2.978978 TGGAGAACTGGAGATTGAACCA 59.021 45.455 0.00 0.00 34.81 3.67
2231 2448 2.479566 TGGAGATTGAACCAGAGTGC 57.520 50.000 0.00 0.00 0.00 4.40
2232 2449 1.699083 TGGAGATTGAACCAGAGTGCA 59.301 47.619 0.00 0.00 0.00 4.57
2233 2450 2.106338 TGGAGATTGAACCAGAGTGCAA 59.894 45.455 0.00 0.00 45.85 4.08
2239 2456 4.829064 TTGAACCAGAGTGCAATGTAAC 57.171 40.909 0.00 0.00 36.55 2.50
2240 2457 3.814625 TGAACCAGAGTGCAATGTAACA 58.185 40.909 0.00 0.00 0.00 2.41
2241 2458 4.203226 TGAACCAGAGTGCAATGTAACAA 58.797 39.130 0.00 0.00 0.00 2.83
2242 2459 4.826733 TGAACCAGAGTGCAATGTAACAAT 59.173 37.500 0.00 0.00 0.00 2.71
2243 2460 5.301551 TGAACCAGAGTGCAATGTAACAATT 59.698 36.000 0.00 0.00 0.00 2.32
2244 2461 6.488344 TGAACCAGAGTGCAATGTAACAATTA 59.512 34.615 0.00 0.00 0.00 1.40
2245 2462 7.176515 TGAACCAGAGTGCAATGTAACAATTAT 59.823 33.333 0.00 0.00 0.00 1.28
2246 2463 6.855836 ACCAGAGTGCAATGTAACAATTATG 58.144 36.000 0.00 0.00 0.00 1.90
2247 2464 6.434028 ACCAGAGTGCAATGTAACAATTATGT 59.566 34.615 0.00 0.00 43.14 2.29
2260 2477 5.125100 ACAATTATGTTGCACAAGTCCTG 57.875 39.130 0.00 0.00 35.91 3.86
2261 2478 4.022068 ACAATTATGTTGCACAAGTCCTGG 60.022 41.667 0.00 0.00 35.91 4.45
2262 2479 1.533625 TATGTTGCACAAGTCCTGGC 58.466 50.000 0.00 0.00 0.00 4.85
2263 2480 0.178981 ATGTTGCACAAGTCCTGGCT 60.179 50.000 0.00 0.00 0.00 4.75
2264 2481 1.102809 TGTTGCACAAGTCCTGGCTG 61.103 55.000 0.00 0.00 0.00 4.85
2265 2482 1.529010 TTGCACAAGTCCTGGCTGG 60.529 57.895 3.65 3.65 37.10 4.85
2266 2483 2.674380 GCACAAGTCCTGGCTGGG 60.674 66.667 10.79 0.45 36.20 4.45
2267 2484 2.674380 CACAAGTCCTGGCTGGGC 60.674 66.667 6.96 6.96 41.82 5.36
2272 2489 4.666253 GTCCTGGCTGGGCTGCAA 62.666 66.667 7.88 0.00 37.49 4.08
2273 2490 4.666253 TCCTGGCTGGGCTGCAAC 62.666 66.667 10.79 0.00 36.20 4.17
2274 2491 4.673375 CCTGGCTGGGCTGCAACT 62.673 66.667 0.50 0.00 34.04 3.16
2275 2492 2.352422 CTGGCTGGGCTGCAACTA 59.648 61.111 0.50 0.00 34.04 2.24
2276 2493 1.748122 CTGGCTGGGCTGCAACTAG 60.748 63.158 0.50 0.00 34.04 2.57
2277 2494 2.439156 GGCTGGGCTGCAACTAGG 60.439 66.667 0.50 0.00 34.04 3.02
2278 2495 2.352805 GCTGGGCTGCAACTAGGT 59.647 61.111 0.50 0.00 0.00 3.08
2279 2496 2.042831 GCTGGGCTGCAACTAGGTG 61.043 63.158 2.45 2.45 0.00 4.00
2280 2497 1.376466 CTGGGCTGCAACTAGGTGT 59.624 57.895 10.06 0.00 0.00 4.16
2281 2498 0.250901 CTGGGCTGCAACTAGGTGTT 60.251 55.000 10.06 0.00 39.92 3.32
2282 2499 0.250727 TGGGCTGCAACTAGGTGTTC 60.251 55.000 10.06 0.00 36.63 3.18
2283 2500 0.960861 GGGCTGCAACTAGGTGTTCC 60.961 60.000 10.06 7.98 36.63 3.62
2284 2501 0.250727 GGCTGCAACTAGGTGTTCCA 60.251 55.000 10.06 0.00 36.63 3.53
2285 2502 1.604604 GCTGCAACTAGGTGTTCCAA 58.395 50.000 10.06 0.00 36.63 3.53
2286 2503 1.953686 GCTGCAACTAGGTGTTCCAAA 59.046 47.619 10.06 0.00 36.63 3.28
2287 2504 2.030805 GCTGCAACTAGGTGTTCCAAAG 60.031 50.000 10.06 0.00 36.63 2.77
2288 2505 1.953686 TGCAACTAGGTGTTCCAAAGC 59.046 47.619 10.06 0.00 36.63 3.51
2289 2506 1.953686 GCAACTAGGTGTTCCAAAGCA 59.046 47.619 10.06 0.00 36.63 3.91
2290 2507 2.558359 GCAACTAGGTGTTCCAAAGCAT 59.442 45.455 10.06 0.00 36.63 3.79
2291 2508 3.756434 GCAACTAGGTGTTCCAAAGCATA 59.244 43.478 10.06 0.00 36.63 3.14
2292 2509 4.379499 GCAACTAGGTGTTCCAAAGCATAC 60.379 45.833 10.06 0.00 36.63 2.39
2293 2510 4.634012 ACTAGGTGTTCCAAAGCATACA 57.366 40.909 0.00 0.00 35.89 2.29
2294 2511 4.324267 ACTAGGTGTTCCAAAGCATACAC 58.676 43.478 0.00 0.00 40.01 2.90
2295 2512 3.508845 AGGTGTTCCAAAGCATACACT 57.491 42.857 0.00 0.00 40.45 3.55
2296 2513 3.412386 AGGTGTTCCAAAGCATACACTC 58.588 45.455 0.00 0.00 40.45 3.51
2297 2514 2.488153 GGTGTTCCAAAGCATACACTCC 59.512 50.000 0.00 0.00 40.45 3.85
2298 2515 3.146066 GTGTTCCAAAGCATACACTCCA 58.854 45.455 0.00 0.00 38.23 3.86
2299 2516 3.058224 GTGTTCCAAAGCATACACTCCAC 60.058 47.826 0.00 0.00 38.23 4.02
2300 2517 2.488153 GTTCCAAAGCATACACTCCACC 59.512 50.000 0.00 0.00 0.00 4.61
2301 2518 1.086696 CCAAAGCATACACTCCACCG 58.913 55.000 0.00 0.00 0.00 4.94
2302 2519 1.086696 CAAAGCATACACTCCACCGG 58.913 55.000 0.00 0.00 0.00 5.28
2303 2520 0.690762 AAAGCATACACTCCACCGGT 59.309 50.000 0.00 0.00 0.00 5.28
2304 2521 0.249398 AAGCATACACTCCACCGGTC 59.751 55.000 2.59 0.00 0.00 4.79
2305 2522 0.902984 AGCATACACTCCACCGGTCA 60.903 55.000 2.59 0.00 0.00 4.02
2306 2523 0.739813 GCATACACTCCACCGGTCAC 60.740 60.000 2.59 0.00 0.00 3.67
2307 2524 0.108329 CATACACTCCACCGGTCACC 60.108 60.000 2.59 0.00 0.00 4.02
2308 2525 0.252103 ATACACTCCACCGGTCACCT 60.252 55.000 2.59 0.00 0.00 4.00
2309 2526 1.183030 TACACTCCACCGGTCACCTG 61.183 60.000 2.59 0.00 0.00 4.00
2310 2527 2.200370 ACTCCACCGGTCACCTGA 59.800 61.111 2.59 0.00 0.00 3.86
2311 2528 1.458777 ACTCCACCGGTCACCTGAA 60.459 57.895 2.59 0.00 0.00 3.02
2312 2529 1.052124 ACTCCACCGGTCACCTGAAA 61.052 55.000 2.59 0.00 0.00 2.69
2313 2530 0.602905 CTCCACCGGTCACCTGAAAC 60.603 60.000 2.59 0.00 0.00 2.78
2314 2531 1.147376 CCACCGGTCACCTGAAACA 59.853 57.895 2.59 0.00 0.00 2.83
2315 2532 0.884704 CCACCGGTCACCTGAAACAG 60.885 60.000 2.59 0.00 0.00 3.16
2316 2533 0.105964 CACCGGTCACCTGAAACAGA 59.894 55.000 2.59 0.00 32.44 3.41
2317 2534 0.834612 ACCGGTCACCTGAAACAGAA 59.165 50.000 0.00 0.00 32.44 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 0.533755 CGGAATTAGGGGAGCAGCAG 60.534 60.000 0.00 0.00 0.00 4.24
13 14 1.069258 GTCGGAGGCGGAATTAGGG 59.931 63.158 0.00 0.00 0.00 3.53
26 27 4.193334 CGCCTCTGCATCGTCGGA 62.193 66.667 0.00 0.00 37.32 4.55
70 71 0.176680 CAATCTCGAGTGGGGGACAG 59.823 60.000 13.13 0.00 0.00 3.51
79 80 2.091610 TCCCAGGATCTCAATCTCGAGT 60.092 50.000 13.13 0.00 34.46 4.18
105 106 0.034186 TGTCATCATTGCCACCCCTC 60.034 55.000 0.00 0.00 0.00 4.30
130 131 0.321741 TCTCTCTTCTCGTCGTGCCT 60.322 55.000 0.00 0.00 0.00 4.75
137 138 1.566703 TGGGATCCTCTCTCTTCTCGT 59.433 52.381 12.58 0.00 0.00 4.18
268 269 2.415608 GCCTCCGACATCGACCTCA 61.416 63.158 2.09 0.00 43.02 3.86
311 312 3.644399 GAAGGTGGACGCCGTCTCC 62.644 68.421 17.76 18.34 34.80 3.71
312 313 2.126031 GAAGGTGGACGCCGTCTC 60.126 66.667 17.76 10.41 34.80 3.36
313 314 2.600769 AGAAGGTGGACGCCGTCT 60.601 61.111 17.76 13.41 41.40 4.18
314 315 2.126031 GAGAAGGTGGACGCCGTC 60.126 66.667 9.15 9.15 37.30 4.79
411 413 1.492599 CCTCTCCTTCTTTCCCATCCC 59.507 57.143 0.00 0.00 0.00 3.85
463 466 1.901464 CCACGGGTGGGGACAAAAG 60.901 63.158 10.05 0.00 46.81 2.27
464 467 2.196229 CCACGGGTGGGGACAAAA 59.804 61.111 10.05 0.00 46.81 2.44
490 493 3.585732 TGTACGAGAGGGGGAAAGAAAAT 59.414 43.478 0.00 0.00 0.00 1.82
539 544 2.777832 AGTTCCTCTCATTGTGAGCC 57.222 50.000 9.70 1.65 43.95 4.70
540 545 4.081420 TCCTAAGTTCCTCTCATTGTGAGC 60.081 45.833 9.70 0.00 43.95 4.26
541 546 5.186797 ACTCCTAAGTTCCTCTCATTGTGAG 59.813 44.000 8.46 8.46 37.97 3.51
542 547 5.087323 ACTCCTAAGTTCCTCTCATTGTGA 58.913 41.667 0.00 0.00 28.74 3.58
543 548 5.413309 ACTCCTAAGTTCCTCTCATTGTG 57.587 43.478 0.00 0.00 28.74 3.33
544 549 7.741554 ATTACTCCTAAGTTCCTCTCATTGT 57.258 36.000 0.00 0.00 36.92 2.71
545 550 9.921637 GATATTACTCCTAAGTTCCTCTCATTG 57.078 37.037 0.00 0.00 36.92 2.82
546 551 9.661954 TGATATTACTCCTAAGTTCCTCTCATT 57.338 33.333 0.00 0.00 36.92 2.57
547 552 9.084533 GTGATATTACTCCTAAGTTCCTCTCAT 57.915 37.037 0.00 0.00 36.92 2.90
548 553 8.059461 TGTGATATTACTCCTAAGTTCCTCTCA 58.941 37.037 0.00 0.00 36.92 3.27
549 554 8.354426 GTGTGATATTACTCCTAAGTTCCTCTC 58.646 40.741 0.00 0.00 36.92 3.20
550 555 7.839705 TGTGTGATATTACTCCTAAGTTCCTCT 59.160 37.037 0.00 0.00 36.92 3.69
551 556 7.921745 GTGTGTGATATTACTCCTAAGTTCCTC 59.078 40.741 0.00 0.00 36.92 3.71
552 557 7.620094 AGTGTGTGATATTACTCCTAAGTTCCT 59.380 37.037 0.00 0.00 36.92 3.36
553 558 7.783042 AGTGTGTGATATTACTCCTAAGTTCC 58.217 38.462 0.00 0.00 36.92 3.62
554 559 8.859517 GAGTGTGTGATATTACTCCTAAGTTC 57.140 38.462 0.00 0.00 36.92 3.01
562 567 8.818057 GTTGTATTGGAGTGTGTGATATTACTC 58.182 37.037 0.00 0.00 38.98 2.59
563 568 8.540388 AGTTGTATTGGAGTGTGTGATATTACT 58.460 33.333 0.00 0.00 0.00 2.24
564 569 8.718102 AGTTGTATTGGAGTGTGTGATATTAC 57.282 34.615 0.00 0.00 0.00 1.89
565 570 9.733556 AAAGTTGTATTGGAGTGTGTGATATTA 57.266 29.630 0.00 0.00 0.00 0.98
566 571 8.514594 CAAAGTTGTATTGGAGTGTGTGATATT 58.485 33.333 0.00 0.00 0.00 1.28
567 572 7.362056 GCAAAGTTGTATTGGAGTGTGTGATAT 60.362 37.037 0.00 0.00 0.00 1.63
568 573 6.072728 GCAAAGTTGTATTGGAGTGTGTGATA 60.073 38.462 0.00 0.00 0.00 2.15
569 574 5.278463 GCAAAGTTGTATTGGAGTGTGTGAT 60.278 40.000 0.00 0.00 0.00 3.06
570 575 4.036262 GCAAAGTTGTATTGGAGTGTGTGA 59.964 41.667 0.00 0.00 0.00 3.58
571 576 4.036734 AGCAAAGTTGTATTGGAGTGTGTG 59.963 41.667 0.00 0.00 0.00 3.82
572 577 4.207165 AGCAAAGTTGTATTGGAGTGTGT 58.793 39.130 0.00 0.00 0.00 3.72
573 578 4.836125 AGCAAAGTTGTATTGGAGTGTG 57.164 40.909 0.00 0.00 0.00 3.82
574 579 8.677300 CATATAAGCAAAGTTGTATTGGAGTGT 58.323 33.333 0.00 0.00 0.00 3.55
575 580 8.131100 CCATATAAGCAAAGTTGTATTGGAGTG 58.869 37.037 0.00 0.00 0.00 3.51
576 581 7.201821 GCCATATAAGCAAAGTTGTATTGGAGT 60.202 37.037 0.00 0.00 0.00 3.85
577 582 7.141363 GCCATATAAGCAAAGTTGTATTGGAG 58.859 38.462 0.00 0.00 0.00 3.86
578 583 6.605194 TGCCATATAAGCAAAGTTGTATTGGA 59.395 34.615 0.00 0.00 37.28 3.53
579 584 6.697019 GTGCCATATAAGCAAAGTTGTATTGG 59.303 38.462 2.62 0.00 43.02 3.16
580 585 7.257003 TGTGCCATATAAGCAAAGTTGTATTG 58.743 34.615 2.62 0.00 43.02 1.90
581 586 7.403312 TGTGCCATATAAGCAAAGTTGTATT 57.597 32.000 2.62 0.00 43.02 1.89
582 587 7.587037 ATGTGCCATATAAGCAAAGTTGTAT 57.413 32.000 2.62 0.00 43.02 2.29
583 588 8.690203 ATATGTGCCATATAAGCAAAGTTGTA 57.310 30.769 2.62 0.00 43.02 2.41
584 589 5.920193 ATGTGCCATATAAGCAAAGTTGT 57.080 34.783 2.62 0.00 43.02 3.32
585 590 8.876275 AAATATGTGCCATATAAGCAAAGTTG 57.124 30.769 7.77 0.00 43.02 3.16
598 603 8.636213 CCTCTCTTTTCATTAAATATGTGCCAT 58.364 33.333 0.00 0.00 0.00 4.40
599 604 7.615365 ACCTCTCTTTTCATTAAATATGTGCCA 59.385 33.333 0.00 0.00 0.00 4.92
600 605 7.917505 CACCTCTCTTTTCATTAAATATGTGCC 59.082 37.037 0.00 0.00 0.00 5.01
601 606 7.433425 GCACCTCTCTTTTCATTAAATATGTGC 59.567 37.037 0.00 0.00 0.00 4.57
602 607 8.680903 AGCACCTCTCTTTTCATTAAATATGTG 58.319 33.333 0.00 0.00 0.00 3.21
603 608 8.814038 AGCACCTCTCTTTTCATTAAATATGT 57.186 30.769 0.00 0.00 0.00 2.29
604 609 9.512435 CAAGCACCTCTCTTTTCATTAAATATG 57.488 33.333 0.00 0.00 0.00 1.78
605 610 9.247861 ACAAGCACCTCTCTTTTCATTAAATAT 57.752 29.630 0.00 0.00 0.00 1.28
606 611 8.514594 CACAAGCACCTCTCTTTTCATTAAATA 58.485 33.333 0.00 0.00 0.00 1.40
607 612 7.373493 CACAAGCACCTCTCTTTTCATTAAAT 58.627 34.615 0.00 0.00 0.00 1.40
608 613 6.239008 CCACAAGCACCTCTCTTTTCATTAAA 60.239 38.462 0.00 0.00 0.00 1.52
609 614 5.241506 CCACAAGCACCTCTCTTTTCATTAA 59.758 40.000 0.00 0.00 0.00 1.40
610 615 4.761739 CCACAAGCACCTCTCTTTTCATTA 59.238 41.667 0.00 0.00 0.00 1.90
611 616 3.571401 CCACAAGCACCTCTCTTTTCATT 59.429 43.478 0.00 0.00 0.00 2.57
612 617 3.152341 CCACAAGCACCTCTCTTTTCAT 58.848 45.455 0.00 0.00 0.00 2.57
613 618 2.092429 ACCACAAGCACCTCTCTTTTCA 60.092 45.455 0.00 0.00 0.00 2.69
614 619 2.576615 ACCACAAGCACCTCTCTTTTC 58.423 47.619 0.00 0.00 0.00 2.29
615 620 2.736670 ACCACAAGCACCTCTCTTTT 57.263 45.000 0.00 0.00 0.00 2.27
616 621 3.136626 AGTTACCACAAGCACCTCTCTTT 59.863 43.478 0.00 0.00 0.00 2.52
617 622 2.706190 AGTTACCACAAGCACCTCTCTT 59.294 45.455 0.00 0.00 0.00 2.85
618 623 2.330216 AGTTACCACAAGCACCTCTCT 58.670 47.619 0.00 0.00 0.00 3.10
619 624 2.841442 AGTTACCACAAGCACCTCTC 57.159 50.000 0.00 0.00 0.00 3.20
620 625 2.028020 GCTAGTTACCACAAGCACCTCT 60.028 50.000 0.00 0.00 35.05 3.69
621 626 2.028020 AGCTAGTTACCACAAGCACCTC 60.028 50.000 0.00 0.00 37.44 3.85
622 627 1.978580 AGCTAGTTACCACAAGCACCT 59.021 47.619 0.00 0.00 37.44 4.00
623 628 2.474410 AGCTAGTTACCACAAGCACC 57.526 50.000 0.00 0.00 37.44 5.01
624 629 4.566987 ACTTAGCTAGTTACCACAAGCAC 58.433 43.478 0.00 0.00 37.44 4.40
625 630 4.884668 ACTTAGCTAGTTACCACAAGCA 57.115 40.909 0.00 0.00 37.44 3.91
634 639 6.377996 TGATGTTCCGGTAACTTAGCTAGTTA 59.622 38.462 0.00 10.09 45.22 2.24
636 641 4.708421 TGATGTTCCGGTAACTTAGCTAGT 59.292 41.667 0.00 0.00 38.99 2.57
637 642 5.041940 GTGATGTTCCGGTAACTTAGCTAG 58.958 45.833 0.00 0.00 38.99 3.42
638 643 4.463539 TGTGATGTTCCGGTAACTTAGCTA 59.536 41.667 0.00 0.00 38.99 3.32
639 644 3.259876 TGTGATGTTCCGGTAACTTAGCT 59.740 43.478 0.00 0.00 38.99 3.32
640 645 3.370061 GTGTGATGTTCCGGTAACTTAGC 59.630 47.826 0.00 0.00 38.99 3.09
641 646 4.387862 GTGTGTGATGTTCCGGTAACTTAG 59.612 45.833 0.00 0.00 38.99 2.18
642 647 4.039488 AGTGTGTGATGTTCCGGTAACTTA 59.961 41.667 0.00 0.00 38.99 2.24
643 648 3.135994 GTGTGTGATGTTCCGGTAACTT 58.864 45.455 0.00 3.15 38.99 2.66
644 649 2.367567 AGTGTGTGATGTTCCGGTAACT 59.632 45.455 0.00 0.00 38.99 2.24
645 650 2.735134 GAGTGTGTGATGTTCCGGTAAC 59.265 50.000 0.00 5.56 38.67 2.50
646 651 2.289195 GGAGTGTGTGATGTTCCGGTAA 60.289 50.000 0.00 0.00 0.00 2.85
647 652 1.274167 GGAGTGTGTGATGTTCCGGTA 59.726 52.381 0.00 0.00 0.00 4.02
648 653 0.034896 GGAGTGTGTGATGTTCCGGT 59.965 55.000 0.00 0.00 0.00 5.28
649 654 0.034756 TGGAGTGTGTGATGTTCCGG 59.965 55.000 0.00 0.00 0.00 5.14
650 655 1.877637 TTGGAGTGTGTGATGTTCCG 58.122 50.000 0.00 0.00 0.00 4.30
651 656 4.647424 TTTTTGGAGTGTGTGATGTTCC 57.353 40.909 0.00 0.00 0.00 3.62
685 690 9.549078 TCATGCAACGATGTATTTATTAGGTTA 57.451 29.630 0.00 0.00 28.42 2.85
686 691 8.445275 TCATGCAACGATGTATTTATTAGGTT 57.555 30.769 0.00 0.00 28.42 3.50
687 692 8.621532 ATCATGCAACGATGTATTTATTAGGT 57.378 30.769 0.00 0.00 28.42 3.08
698 703 8.876790 CATCTATGTAATATCATGCAACGATGT 58.123 33.333 11.26 3.13 0.00 3.06
699 704 8.876790 ACATCTATGTAATATCATGCAACGATG 58.123 33.333 11.26 5.23 39.68 3.84
700 705 9.440773 AACATCTATGTAATATCATGCAACGAT 57.559 29.630 7.13 7.13 40.80 3.73
701 706 8.831715 AACATCTATGTAATATCATGCAACGA 57.168 30.769 0.00 0.00 40.80 3.85
702 707 8.171196 GGAACATCTATGTAATATCATGCAACG 58.829 37.037 0.00 0.00 40.80 4.10
703 708 9.224267 AGGAACATCTATGTAATATCATGCAAC 57.776 33.333 0.00 0.00 40.80 4.17
705 710 9.875691 GTAGGAACATCTATGTAATATCATGCA 57.124 33.333 0.00 0.00 40.80 3.96
706 711 9.319143 GGTAGGAACATCTATGTAATATCATGC 57.681 37.037 0.00 0.00 40.80 4.06
707 712 9.823647 GGGTAGGAACATCTATGTAATATCATG 57.176 37.037 0.00 0.00 40.80 3.07
708 713 9.560860 TGGGTAGGAACATCTATGTAATATCAT 57.439 33.333 0.00 0.00 40.80 2.45
709 714 8.812972 GTGGGTAGGAACATCTATGTAATATCA 58.187 37.037 0.00 0.00 40.80 2.15
710 715 9.036980 AGTGGGTAGGAACATCTATGTAATATC 57.963 37.037 0.00 0.00 40.80 1.63
711 716 8.974292 AGTGGGTAGGAACATCTATGTAATAT 57.026 34.615 0.00 0.00 40.80 1.28
713 718 8.974292 ATAGTGGGTAGGAACATCTATGTAAT 57.026 34.615 0.00 0.00 40.80 1.89
714 719 9.529823 CTATAGTGGGTAGGAACATCTATGTAA 57.470 37.037 0.00 0.00 40.80 2.41
715 720 8.897692 TCTATAGTGGGTAGGAACATCTATGTA 58.102 37.037 0.00 0.00 40.80 2.29
716 721 7.766628 TCTATAGTGGGTAGGAACATCTATGT 58.233 38.462 0.00 0.00 44.20 2.29
717 722 7.340743 CCTCTATAGTGGGTAGGAACATCTATG 59.659 44.444 12.29 0.00 0.00 2.23
718 723 7.019761 ACCTCTATAGTGGGTAGGAACATCTAT 59.980 40.741 21.82 0.00 33.22 1.98
719 724 6.334774 ACCTCTATAGTGGGTAGGAACATCTA 59.665 42.308 21.82 0.00 33.22 1.98
720 725 5.136392 ACCTCTATAGTGGGTAGGAACATCT 59.864 44.000 21.82 0.00 33.22 2.90
721 726 5.395611 ACCTCTATAGTGGGTAGGAACATC 58.604 45.833 21.82 0.00 33.22 3.06
722 727 5.420215 ACCTCTATAGTGGGTAGGAACAT 57.580 43.478 21.82 0.00 33.22 2.71
723 728 4.894252 ACCTCTATAGTGGGTAGGAACA 57.106 45.455 21.82 0.00 33.22 3.18
729 734 9.175577 ACTATGTTACTACCTCTATAGTGGGTA 57.824 37.037 21.82 20.12 36.09 3.69
730 735 8.054931 ACTATGTTACTACCTCTATAGTGGGT 57.945 38.462 21.82 20.09 36.09 4.51
731 736 8.384718 AGACTATGTTACTACCTCTATAGTGGG 58.615 40.741 21.82 16.23 36.09 4.61
739 744 8.995577 ACTTCTCTAGACTATGTTACTACCTCT 58.004 37.037 0.00 0.00 0.00 3.69
740 745 9.048446 CACTTCTCTAGACTATGTTACTACCTC 57.952 40.741 0.00 0.00 0.00 3.85
741 746 8.550585 ACACTTCTCTAGACTATGTTACTACCT 58.449 37.037 0.00 0.00 0.00 3.08
742 747 8.614346 CACACTTCTCTAGACTATGTTACTACC 58.386 40.741 0.00 0.00 0.00 3.18
743 748 9.165035 ACACACTTCTCTAGACTATGTTACTAC 57.835 37.037 0.00 0.00 0.00 2.73
745 750 9.736414 TTACACACTTCTCTAGACTATGTTACT 57.264 33.333 0.00 0.00 0.00 2.24
746 751 9.991388 CTTACACACTTCTCTAGACTATGTTAC 57.009 37.037 0.00 0.00 0.00 2.50
747 752 9.736414 ACTTACACACTTCTCTAGACTATGTTA 57.264 33.333 0.00 0.00 0.00 2.41
748 753 8.638629 ACTTACACACTTCTCTAGACTATGTT 57.361 34.615 0.00 0.00 0.00 2.71
749 754 8.638629 AACTTACACACTTCTCTAGACTATGT 57.361 34.615 0.00 0.00 0.00 2.29
750 755 9.991388 GTAACTTACACACTTCTCTAGACTATG 57.009 37.037 0.00 0.00 0.00 2.23
751 756 9.962809 AGTAACTTACACACTTCTCTAGACTAT 57.037 33.333 1.79 0.00 0.00 2.12
753 758 9.439500 CTAGTAACTTACACACTTCTCTAGACT 57.561 37.037 1.79 0.00 0.00 3.24
754 759 8.177013 GCTAGTAACTTACACACTTCTCTAGAC 58.823 40.741 1.79 0.00 0.00 2.59
755 760 8.102047 AGCTAGTAACTTACACACTTCTCTAGA 58.898 37.037 1.79 0.00 0.00 2.43
756 761 8.271312 AGCTAGTAACTTACACACTTCTCTAG 57.729 38.462 1.79 0.00 0.00 2.43
757 762 8.632906 AAGCTAGTAACTTACACACTTCTCTA 57.367 34.615 1.79 0.00 0.00 2.43
758 763 7.527568 AAGCTAGTAACTTACACACTTCTCT 57.472 36.000 1.79 0.00 0.00 3.10
759 764 9.291664 CATAAGCTAGTAACTTACACACTTCTC 57.708 37.037 1.79 0.00 32.67 2.87
760 765 8.804204 ACATAAGCTAGTAACTTACACACTTCT 58.196 33.333 1.79 0.00 32.67 2.85
761 766 8.983307 ACATAAGCTAGTAACTTACACACTTC 57.017 34.615 1.79 0.00 32.67 3.01
762 767 9.420551 GAACATAAGCTAGTAACTTACACACTT 57.579 33.333 1.79 4.31 32.67 3.16
763 768 8.804204 AGAACATAAGCTAGTAACTTACACACT 58.196 33.333 1.79 0.00 32.67 3.55
764 769 8.983307 AGAACATAAGCTAGTAACTTACACAC 57.017 34.615 1.79 0.00 32.67 3.82
765 770 9.419297 CAAGAACATAAGCTAGTAACTTACACA 57.581 33.333 1.79 0.00 32.67 3.72
766 771 8.381387 GCAAGAACATAAGCTAGTAACTTACAC 58.619 37.037 1.79 0.00 32.67 2.90
767 772 7.548075 GGCAAGAACATAAGCTAGTAACTTACA 59.452 37.037 1.79 0.00 32.67 2.41
768 773 7.011202 GGGCAAGAACATAAGCTAGTAACTTAC 59.989 40.741 0.00 0.00 32.67 2.34
769 774 7.046033 GGGCAAGAACATAAGCTAGTAACTTA 58.954 38.462 0.00 0.00 34.29 2.24
770 775 5.880887 GGGCAAGAACATAAGCTAGTAACTT 59.119 40.000 0.00 0.00 0.00 2.66
771 776 5.045869 TGGGCAAGAACATAAGCTAGTAACT 60.046 40.000 0.00 0.00 0.00 2.24
772 777 5.183228 TGGGCAAGAACATAAGCTAGTAAC 58.817 41.667 0.00 0.00 0.00 2.50
773 778 5.429681 TGGGCAAGAACATAAGCTAGTAA 57.570 39.130 0.00 0.00 0.00 2.24
774 779 5.630415 ATGGGCAAGAACATAAGCTAGTA 57.370 39.130 0.00 0.00 0.00 1.82
775 780 4.510167 ATGGGCAAGAACATAAGCTAGT 57.490 40.909 0.00 0.00 0.00 2.57
776 781 4.641989 ACAATGGGCAAGAACATAAGCTAG 59.358 41.667 0.00 0.00 0.00 3.42
777 782 4.398988 CACAATGGGCAAGAACATAAGCTA 59.601 41.667 0.00 0.00 0.00 3.32
778 783 3.194116 CACAATGGGCAAGAACATAAGCT 59.806 43.478 0.00 0.00 0.00 3.74
779 784 3.193267 TCACAATGGGCAAGAACATAAGC 59.807 43.478 0.00 0.00 0.00 3.09
780 785 4.380867 GGTCACAATGGGCAAGAACATAAG 60.381 45.833 0.00 0.00 0.00 1.73
781 786 3.509575 GGTCACAATGGGCAAGAACATAA 59.490 43.478 0.00 0.00 0.00 1.90
782 787 3.088532 GGTCACAATGGGCAAGAACATA 58.911 45.455 0.00 0.00 0.00 2.29
783 788 1.895131 GGTCACAATGGGCAAGAACAT 59.105 47.619 0.00 0.00 0.00 2.71
784 789 1.327303 GGTCACAATGGGCAAGAACA 58.673 50.000 0.00 0.00 0.00 3.18
785 790 1.270550 CTGGTCACAATGGGCAAGAAC 59.729 52.381 0.00 0.00 0.00 3.01
786 791 1.619654 CTGGTCACAATGGGCAAGAA 58.380 50.000 0.00 0.00 0.00 2.52
787 792 0.895100 GCTGGTCACAATGGGCAAGA 60.895 55.000 0.00 0.00 0.00 3.02
788 793 1.588082 GCTGGTCACAATGGGCAAG 59.412 57.895 0.00 0.00 0.00 4.01
789 794 1.907807 GGCTGGTCACAATGGGCAA 60.908 57.895 0.00 0.00 0.00 4.52
790 795 1.496444 TAGGCTGGTCACAATGGGCA 61.496 55.000 0.00 0.00 0.00 5.36
791 796 0.749454 CTAGGCTGGTCACAATGGGC 60.749 60.000 0.00 0.00 0.00 5.36
792 797 0.620556 ACTAGGCTGGTCACAATGGG 59.379 55.000 0.00 0.00 0.00 4.00
793 798 1.679944 CCACTAGGCTGGTCACAATGG 60.680 57.143 0.00 0.00 0.00 3.16
794 799 1.278985 TCCACTAGGCTGGTCACAATG 59.721 52.381 0.00 0.00 32.50 2.82
795 800 1.556911 CTCCACTAGGCTGGTCACAAT 59.443 52.381 0.00 0.00 32.50 2.71
796 801 0.976641 CTCCACTAGGCTGGTCACAA 59.023 55.000 0.00 0.00 32.50 3.33
797 802 0.904865 CCTCCACTAGGCTGGTCACA 60.905 60.000 0.00 0.00 38.97 3.58
798 803 1.617947 CCCTCCACTAGGCTGGTCAC 61.618 65.000 0.00 0.00 45.03 3.67
799 804 1.306141 CCCTCCACTAGGCTGGTCA 60.306 63.158 0.00 0.00 45.03 4.02
800 805 2.736826 GCCCTCCACTAGGCTGGTC 61.737 68.421 0.00 0.00 46.14 4.02
801 806 2.689034 GCCCTCCACTAGGCTGGT 60.689 66.667 0.00 0.00 46.14 4.00
806 811 1.763545 GAAGTAAGGCCCTCCACTAGG 59.236 57.143 0.00 0.00 46.09 3.02
807 812 2.696187 GAGAAGTAAGGCCCTCCACTAG 59.304 54.545 0.00 0.00 33.74 2.57
808 813 2.626149 GGAGAAGTAAGGCCCTCCACTA 60.626 54.545 16.20 0.00 43.47 2.74
809 814 1.574263 GAGAAGTAAGGCCCTCCACT 58.426 55.000 0.00 0.00 33.74 4.00
810 815 0.542333 GGAGAAGTAAGGCCCTCCAC 59.458 60.000 16.20 2.53 43.47 4.02
811 816 0.417841 AGGAGAAGTAAGGCCCTCCA 59.582 55.000 21.32 0.00 45.73 3.86
812 817 1.124780 GAGGAGAAGTAAGGCCCTCC 58.875 60.000 13.94 13.94 44.14 4.30
813 818 1.760029 CAGAGGAGAAGTAAGGCCCTC 59.240 57.143 0.00 0.00 42.73 4.30
814 819 1.623834 CCAGAGGAGAAGTAAGGCCCT 60.624 57.143 0.00 0.00 0.00 5.19
815 820 0.833949 CCAGAGGAGAAGTAAGGCCC 59.166 60.000 0.00 0.00 0.00 5.80
816 821 1.867363 TCCAGAGGAGAAGTAAGGCC 58.133 55.000 0.00 0.00 0.00 5.19
817 822 2.419436 GCTTCCAGAGGAGAAGTAAGGC 60.419 54.545 2.78 0.00 42.27 4.35
818 823 3.103742 AGCTTCCAGAGGAGAAGTAAGG 58.896 50.000 2.78 0.00 42.27 2.69
819 824 3.766591 TCAGCTTCCAGAGGAGAAGTAAG 59.233 47.826 2.78 0.00 42.27 2.34
820 825 3.779444 TCAGCTTCCAGAGGAGAAGTAA 58.221 45.455 2.78 0.00 42.27 2.24
821 826 3.458044 TCAGCTTCCAGAGGAGAAGTA 57.542 47.619 2.78 0.00 42.27 2.24
822 827 2.317371 TCAGCTTCCAGAGGAGAAGT 57.683 50.000 2.78 0.00 42.27 3.01
823 828 3.910568 ATTCAGCTTCCAGAGGAGAAG 57.089 47.619 0.00 0.00 42.99 2.85
824 829 5.965033 AATATTCAGCTTCCAGAGGAGAA 57.035 39.130 0.00 0.00 31.21 2.87
825 830 5.899547 TGTAATATTCAGCTTCCAGAGGAGA 59.100 40.000 0.00 0.00 31.21 3.71
826 831 6.166984 TGTAATATTCAGCTTCCAGAGGAG 57.833 41.667 0.00 0.00 31.21 3.69
827 832 6.560003 TTGTAATATTCAGCTTCCAGAGGA 57.440 37.500 0.00 0.00 0.00 3.71
828 833 7.121168 TGTTTTGTAATATTCAGCTTCCAGAGG 59.879 37.037 0.00 0.00 0.00 3.69
829 834 8.044060 TGTTTTGTAATATTCAGCTTCCAGAG 57.956 34.615 0.00 0.00 0.00 3.35
830 835 7.994425 TGTTTTGTAATATTCAGCTTCCAGA 57.006 32.000 0.00 0.00 0.00 3.86
831 836 9.294030 GATTGTTTTGTAATATTCAGCTTCCAG 57.706 33.333 0.00 0.00 0.00 3.86
832 837 8.250332 GGATTGTTTTGTAATATTCAGCTTCCA 58.750 33.333 0.00 0.00 0.00 3.53
833 838 8.470002 AGGATTGTTTTGTAATATTCAGCTTCC 58.530 33.333 0.00 0.00 0.00 3.46
834 839 9.508567 GAGGATTGTTTTGTAATATTCAGCTTC 57.491 33.333 0.00 0.00 0.00 3.86
835 840 9.023962 TGAGGATTGTTTTGTAATATTCAGCTT 57.976 29.630 0.00 0.00 0.00 3.74
836 841 8.579850 TGAGGATTGTTTTGTAATATTCAGCT 57.420 30.769 0.00 0.00 0.00 4.24
861 866 8.094798 TCAGAGTAACATTTCGCTTGTTTTAT 57.905 30.769 3.40 0.00 38.26 1.40
982 996 2.781595 ATTGGAGCCGCGACGAACTT 62.782 55.000 8.23 0.00 0.00 2.66
985 999 2.813474 CATTGGAGCCGCGACGAA 60.813 61.111 8.23 2.57 0.00 3.85
1299 1321 1.335142 GCTCAAGTCAACTCGTCGTCT 60.335 52.381 0.00 0.00 0.00 4.18
1313 1335 1.072965 GGGATCCCATACCTGCTCAAG 59.927 57.143 26.95 0.00 35.81 3.02
1325 1347 3.338250 GGCACAGGTGGGATCCCA 61.338 66.667 30.62 30.62 45.02 4.37
1339 1361 1.561769 ATGATTCGGTCACTGGGGCA 61.562 55.000 0.00 0.00 40.28 5.36
1346 1368 5.293324 TGCTGTATAAACATGATTCGGTCAC 59.707 40.000 0.00 0.00 40.28 3.67
1351 1373 5.663795 AGCTGCTGTATAAACATGATTCG 57.336 39.130 0.00 0.00 34.37 3.34
1357 1379 8.388103 CGTTAACTTTAGCTGCTGTATAAACAT 58.612 33.333 13.43 0.00 34.37 2.71
1363 1394 7.611213 AAATCGTTAACTTTAGCTGCTGTAT 57.389 32.000 13.43 0.00 0.00 2.29
1421 1455 5.614231 CGTTGAAATGCACTCTCAAGAGAAG 60.614 44.000 13.83 6.90 44.74 2.85
1423 1457 3.742882 CGTTGAAATGCACTCTCAAGAGA 59.257 43.478 13.83 4.51 44.74 3.10
1425 1459 3.727726 TCGTTGAAATGCACTCTCAAGA 58.272 40.909 7.09 5.33 30.00 3.02
1426 1460 4.461405 CTTCGTTGAAATGCACTCTCAAG 58.539 43.478 7.09 3.58 30.00 3.02
1427 1461 3.250762 CCTTCGTTGAAATGCACTCTCAA 59.749 43.478 0.00 0.00 0.00 3.02
1429 1463 2.808543 ACCTTCGTTGAAATGCACTCTC 59.191 45.455 0.00 0.00 0.00 3.20
1430 1464 2.851195 ACCTTCGTTGAAATGCACTCT 58.149 42.857 0.00 0.00 0.00 3.24
1464 1543 3.007398 GGACTGAGGCCTATTTCGATCAT 59.993 47.826 4.42 0.00 0.00 2.45
1473 1552 0.032017 AGTTCCGGACTGAGGCCTAT 60.032 55.000 4.42 0.00 37.17 2.57
1490 1569 4.504858 GAAACACATCCGGAGTATTCAGT 58.495 43.478 11.34 0.00 0.00 3.41
1502 1654 3.424433 GGACGATGAAACGAAACACATCC 60.424 47.826 0.00 0.00 36.71 3.51
1503 1655 3.432252 AGGACGATGAAACGAAACACATC 59.568 43.478 0.00 0.00 36.70 3.06
1512 1664 3.176708 ACACGATAAGGACGATGAAACG 58.823 45.455 0.00 0.00 39.31 3.60
1513 1665 6.636666 TTAACACGATAAGGACGATGAAAC 57.363 37.500 0.00 0.00 34.70 2.78
1514 1666 7.837202 ATTTAACACGATAAGGACGATGAAA 57.163 32.000 0.00 0.00 34.70 2.69
1519 1671 6.424509 ACAACAATTTAACACGATAAGGACGA 59.575 34.615 0.00 0.00 34.70 4.20
1539 1699 9.246670 TGTCCTTATAAACTAGCTAGTACAACA 57.753 33.333 26.29 17.11 34.99 3.33
1561 1721 7.041098 CCTCTAAATTATAGCACAATGGTGTCC 60.041 40.741 1.31 0.00 46.95 4.02
1562 1722 7.499232 ACCTCTAAATTATAGCACAATGGTGTC 59.501 37.037 1.31 0.00 46.95 3.67
1566 1726 9.167311 GGATACCTCTAAATTATAGCACAATGG 57.833 37.037 0.00 0.00 0.00 3.16
1605 1791 9.774742 GAAATAGAGCTGGTTTGTAAATTGTAG 57.225 33.333 0.00 0.00 0.00 2.74
1637 1825 0.029035 CGTCGACCGGAAGTATCAGG 59.971 60.000 9.46 0.00 45.42 3.86
1645 1833 0.452987 CTGGATTACGTCGACCGGAA 59.547 55.000 9.46 8.69 45.17 4.30
1686 1874 5.104859 TGGACGGCCATGTTTATACTTAAGA 60.105 40.000 5.41 0.00 39.92 2.10
1720 1908 5.871396 AGGAAATGGATAGAAGACGCTTA 57.129 39.130 0.00 0.00 0.00 3.09
1726 1914 6.581388 ACCATGAAGGAAATGGATAGAAGA 57.419 37.500 9.36 0.00 46.44 2.87
1735 1923 5.840243 TGATTGCTACCATGAAGGAAATG 57.160 39.130 0.00 0.00 41.22 2.32
1760 1948 2.663119 GCTAAAATTGCAGCCTTTGACG 59.337 45.455 0.00 0.00 0.00 4.35
1764 1952 6.535963 AATCTAGCTAAAATTGCAGCCTTT 57.464 33.333 7.70 0.00 38.61 3.11
1765 1953 6.535963 AAATCTAGCTAAAATTGCAGCCTT 57.464 33.333 7.70 0.00 38.61 4.35
1807 1995 3.802948 AGATCCTTACACCTTGCGTAG 57.197 47.619 0.00 0.00 0.00 3.51
1808 1996 5.864418 AATAGATCCTTACACCTTGCGTA 57.136 39.130 0.00 0.00 0.00 4.42
1809 1997 4.755266 AATAGATCCTTACACCTTGCGT 57.245 40.909 0.00 0.00 0.00 5.24
1815 2003 5.990668 ACACCAGAAATAGATCCTTACACC 58.009 41.667 0.00 0.00 0.00 4.16
1828 2016 6.998074 TGTCATACTTTCAGAACACCAGAAAT 59.002 34.615 0.00 0.00 31.58 2.17
1856 2044 2.575461 GCCATCAACTTGGGCTGC 59.425 61.111 0.00 0.00 44.32 5.25
1882 2080 2.092753 AGCACTAATCCTGTGTGATGGG 60.093 50.000 0.00 0.00 37.70 4.00
1886 2084 4.469586 TCCATTAGCACTAATCCTGTGTGA 59.530 41.667 0.00 0.00 37.70 3.58
1898 2096 8.220559 AGAATAATGTAACCATCCATTAGCACT 58.779 33.333 0.00 0.00 37.07 4.40
1899 2097 8.396272 AGAATAATGTAACCATCCATTAGCAC 57.604 34.615 0.00 0.00 37.07 4.40
1948 2150 9.288576 GGTTGGTGATTCATGAGATATCAATTA 57.711 33.333 9.60 0.00 30.72 1.40
1949 2151 8.003044 AGGTTGGTGATTCATGAGATATCAATT 58.997 33.333 9.60 0.00 30.72 2.32
1951 2153 6.903516 AGGTTGGTGATTCATGAGATATCAA 58.096 36.000 9.60 4.03 30.72 2.57
1960 2162 4.455533 TCGAGAAAAGGTTGGTGATTCATG 59.544 41.667 0.00 0.00 0.00 3.07
1961 2163 4.651778 TCGAGAAAAGGTTGGTGATTCAT 58.348 39.130 0.00 0.00 0.00 2.57
1966 2169 2.432874 TGACTCGAGAAAAGGTTGGTGA 59.567 45.455 21.68 0.00 0.00 4.02
1992 2195 6.702329 CAACTCTTGGTCTTACCTCATAAGT 58.298 40.000 0.00 0.00 41.13 2.24
1997 2200 2.038557 GGCAACTCTTGGTCTTACCTCA 59.961 50.000 0.00 0.00 39.58 3.86
2024 2236 0.537188 CTACATAGCCGGCCCTATGG 59.463 60.000 29.14 15.32 45.67 2.74
2052 2268 6.599244 CAGCTTGAAACCATCTGGACTAAATA 59.401 38.462 2.55 0.00 38.94 1.40
2055 2271 4.326826 CAGCTTGAAACCATCTGGACTAA 58.673 43.478 2.55 0.00 38.94 2.24
2060 2276 0.529378 GCCAGCTTGAAACCATCTGG 59.471 55.000 2.43 2.43 45.26 3.86
2094 2310 6.883756 TGATGCAGGAATAGTGTATGTTTTGA 59.116 34.615 0.00 0.00 0.00 2.69
2095 2311 7.087409 TGATGCAGGAATAGTGTATGTTTTG 57.913 36.000 0.00 0.00 0.00 2.44
2096 2312 7.394359 ACTTGATGCAGGAATAGTGTATGTTTT 59.606 33.333 0.00 0.00 0.00 2.43
2097 2313 6.886459 ACTTGATGCAGGAATAGTGTATGTTT 59.114 34.615 0.00 0.00 0.00 2.83
2112 2329 4.163552 CACAGCAATACAACTTGATGCAG 58.836 43.478 15.94 12.27 44.32 4.41
2116 2333 5.804639 TCTACCACAGCAATACAACTTGAT 58.195 37.500 0.00 0.00 0.00 2.57
2132 2349 7.023575 CACAACTATGAAATTGCTTCTACCAC 58.976 38.462 0.00 0.00 34.86 4.16
2134 2351 6.030228 GCACAACTATGAAATTGCTTCTACC 58.970 40.000 0.00 0.00 34.86 3.18
2137 2354 4.523943 TGGCACAACTATGAAATTGCTTCT 59.476 37.500 0.00 0.00 32.14 2.85
2166 2383 2.481568 CTGCAACTATCCATGCCGTATG 59.518 50.000 0.00 0.00 41.87 2.39
2167 2384 2.771089 CTGCAACTATCCATGCCGTAT 58.229 47.619 0.00 0.00 41.87 3.06
2168 2385 1.810031 GCTGCAACTATCCATGCCGTA 60.810 52.381 0.00 0.00 41.87 4.02
2169 2386 1.097547 GCTGCAACTATCCATGCCGT 61.098 55.000 0.00 0.00 41.87 5.68
2170 2387 0.816825 AGCTGCAACTATCCATGCCG 60.817 55.000 1.02 0.00 41.87 5.69
2171 2388 0.666913 CAGCTGCAACTATCCATGCC 59.333 55.000 0.00 0.00 41.87 4.40
2172 2389 0.666913 CCAGCTGCAACTATCCATGC 59.333 55.000 8.66 0.00 42.86 4.06
2173 2390 2.048444 ACCAGCTGCAACTATCCATG 57.952 50.000 8.66 0.00 0.00 3.66
2174 2391 2.025981 TGAACCAGCTGCAACTATCCAT 60.026 45.455 8.66 0.00 0.00 3.41
2175 2392 1.350684 TGAACCAGCTGCAACTATCCA 59.649 47.619 8.66 0.00 0.00 3.41
2176 2393 2.113860 TGAACCAGCTGCAACTATCC 57.886 50.000 8.66 0.00 0.00 2.59
2177 2394 4.082571 ACATTTGAACCAGCTGCAACTATC 60.083 41.667 8.66 0.18 0.00 2.08
2178 2395 3.828451 ACATTTGAACCAGCTGCAACTAT 59.172 39.130 8.66 0.00 0.00 2.12
2179 2396 3.221771 ACATTTGAACCAGCTGCAACTA 58.778 40.909 8.66 0.00 0.00 2.24
2180 2397 2.034124 ACATTTGAACCAGCTGCAACT 58.966 42.857 8.66 0.00 0.00 3.16
2181 2398 2.223782 TGACATTTGAACCAGCTGCAAC 60.224 45.455 8.66 1.66 0.00 4.17
2182 2399 2.030371 TGACATTTGAACCAGCTGCAA 58.970 42.857 8.66 4.53 0.00 4.08
2183 2400 1.610038 CTGACATTTGAACCAGCTGCA 59.390 47.619 8.66 0.00 0.00 4.41
2184 2401 1.610522 ACTGACATTTGAACCAGCTGC 59.389 47.619 8.66 0.00 0.00 5.25
2185 2402 2.030540 CCACTGACATTTGAACCAGCTG 60.031 50.000 6.78 6.78 0.00 4.24
2186 2403 2.158623 TCCACTGACATTTGAACCAGCT 60.159 45.455 0.00 0.00 0.00 4.24
2187 2404 2.227388 CTCCACTGACATTTGAACCAGC 59.773 50.000 0.00 0.00 0.00 4.85
2188 2405 3.743521 TCTCCACTGACATTTGAACCAG 58.256 45.455 0.00 0.00 0.00 4.00
2189 2406 3.855255 TCTCCACTGACATTTGAACCA 57.145 42.857 0.00 0.00 0.00 3.67
2190 2407 4.137543 AGTTCTCCACTGACATTTGAACC 58.862 43.478 0.00 0.00 32.83 3.62
2202 2419 3.008485 GGTTCAATCTCCAGTTCTCCACT 59.992 47.826 0.00 0.00 35.35 4.00
2203 2420 3.244561 TGGTTCAATCTCCAGTTCTCCAC 60.245 47.826 0.00 0.00 0.00 4.02
2204 2421 2.978978 TGGTTCAATCTCCAGTTCTCCA 59.021 45.455 0.00 0.00 0.00 3.86
2205 2422 3.604582 CTGGTTCAATCTCCAGTTCTCC 58.395 50.000 3.38 0.00 44.19 3.71
2212 2429 1.699083 TGCACTCTGGTTCAATCTCCA 59.301 47.619 0.00 0.00 0.00 3.86
2213 2430 2.479566 TGCACTCTGGTTCAATCTCC 57.520 50.000 0.00 0.00 0.00 3.71
2214 2431 3.755378 ACATTGCACTCTGGTTCAATCTC 59.245 43.478 0.00 0.00 37.24 2.75
2215 2432 3.759581 ACATTGCACTCTGGTTCAATCT 58.240 40.909 0.00 0.00 37.24 2.40
2216 2433 5.048782 TGTTACATTGCACTCTGGTTCAATC 60.049 40.000 0.00 0.00 37.24 2.67
2217 2434 4.826733 TGTTACATTGCACTCTGGTTCAAT 59.173 37.500 0.00 0.00 39.22 2.57
2218 2435 4.203226 TGTTACATTGCACTCTGGTTCAA 58.797 39.130 0.00 0.00 33.63 2.69
2219 2436 3.814625 TGTTACATTGCACTCTGGTTCA 58.185 40.909 0.00 0.00 0.00 3.18
2220 2437 4.829064 TTGTTACATTGCACTCTGGTTC 57.171 40.909 0.00 0.00 0.00 3.62
2221 2438 5.789643 AATTGTTACATTGCACTCTGGTT 57.210 34.783 0.00 0.00 0.00 3.67
2222 2439 6.434028 ACATAATTGTTACATTGCACTCTGGT 59.566 34.615 0.00 0.00 29.55 4.00
2223 2440 6.855836 ACATAATTGTTACATTGCACTCTGG 58.144 36.000 0.00 0.00 29.55 3.86
2224 2441 7.201376 GCAACATAATTGTTACATTGCACTCTG 60.201 37.037 12.40 0.00 44.24 3.35
2225 2442 6.808212 GCAACATAATTGTTACATTGCACTCT 59.192 34.615 12.40 0.00 44.24 3.24
2226 2443 6.585702 TGCAACATAATTGTTACATTGCACTC 59.414 34.615 15.04 0.00 44.24 3.51
2227 2444 6.453943 TGCAACATAATTGTTACATTGCACT 58.546 32.000 15.04 0.00 44.24 4.40
2228 2445 6.702972 TGCAACATAATTGTTACATTGCAC 57.297 33.333 15.04 0.00 44.24 4.57
2229 2446 6.218746 TGTGCAACATAATTGTTACATTGCA 58.781 32.000 15.04 15.04 45.67 4.08
2230 2447 6.702972 TGTGCAACATAATTGTTACATTGC 57.297 33.333 10.90 10.90 45.67 3.56
2246 2463 1.656441 CAGCCAGGACTTGTGCAAC 59.344 57.895 0.00 0.00 37.35 4.17
2247 2464 1.529010 CCAGCCAGGACTTGTGCAA 60.529 57.895 0.00 0.00 41.22 4.08
2248 2465 2.113774 CCAGCCAGGACTTGTGCA 59.886 61.111 0.00 0.00 41.22 4.57
2249 2466 2.674380 CCCAGCCAGGACTTGTGC 60.674 66.667 0.00 0.00 41.22 4.57
2250 2467 2.674380 GCCCAGCCAGGACTTGTG 60.674 66.667 0.00 0.00 41.22 3.33
2251 2468 2.856000 AGCCCAGCCAGGACTTGT 60.856 61.111 0.00 0.00 41.22 3.16
2252 2469 2.360852 CAGCCCAGCCAGGACTTG 60.361 66.667 0.00 0.00 41.22 3.16
2253 2470 4.357279 GCAGCCCAGCCAGGACTT 62.357 66.667 0.00 0.00 41.22 3.01
2255 2472 4.666253 TTGCAGCCCAGCCAGGAC 62.666 66.667 0.00 0.00 41.22 3.85
2256 2473 4.666253 GTTGCAGCCCAGCCAGGA 62.666 66.667 0.00 0.00 41.22 3.86
2257 2474 3.272364 TAGTTGCAGCCCAGCCAGG 62.272 63.158 0.00 0.00 37.03 4.45
2258 2475 1.748122 CTAGTTGCAGCCCAGCCAG 60.748 63.158 0.00 0.00 0.00 4.85
2259 2476 2.352422 CTAGTTGCAGCCCAGCCA 59.648 61.111 0.00 0.00 0.00 4.75
2260 2477 2.439156 CCTAGTTGCAGCCCAGCC 60.439 66.667 0.00 0.00 0.00 4.85
2261 2478 2.042831 CACCTAGTTGCAGCCCAGC 61.043 63.158 0.00 0.00 0.00 4.85
2262 2479 0.250901 AACACCTAGTTGCAGCCCAG 60.251 55.000 0.00 0.00 39.49 4.45
2263 2480 0.250727 GAACACCTAGTTGCAGCCCA 60.251 55.000 0.00 0.00 41.51 5.36
2264 2481 0.960861 GGAACACCTAGTTGCAGCCC 60.961 60.000 0.00 0.00 46.60 5.19
2265 2482 2.556286 GGAACACCTAGTTGCAGCC 58.444 57.895 0.00 0.00 46.60 4.85
2270 2487 4.759693 TGTATGCTTTGGAACACCTAGTTG 59.240 41.667 0.00 0.00 41.51 3.16
2271 2488 4.760204 GTGTATGCTTTGGAACACCTAGTT 59.240 41.667 0.00 0.00 44.93 2.24
2272 2489 4.041691 AGTGTATGCTTTGGAACACCTAGT 59.958 41.667 0.00 0.00 42.50 2.57
2273 2490 4.579869 AGTGTATGCTTTGGAACACCTAG 58.420 43.478 0.00 0.00 42.50 3.02
2274 2491 4.564821 GGAGTGTATGCTTTGGAACACCTA 60.565 45.833 0.00 0.00 42.50 3.08
2275 2492 3.412386 GAGTGTATGCTTTGGAACACCT 58.588 45.455 0.00 0.00 42.50 4.00
2276 2493 2.488153 GGAGTGTATGCTTTGGAACACC 59.512 50.000 0.00 0.00 42.50 4.16
2277 2494 3.058224 GTGGAGTGTATGCTTTGGAACAC 60.058 47.826 0.00 0.00 39.29 3.32
2278 2495 3.146066 GTGGAGTGTATGCTTTGGAACA 58.854 45.455 0.00 0.00 0.00 3.18
2279 2496 2.488153 GGTGGAGTGTATGCTTTGGAAC 59.512 50.000 0.00 0.00 0.00 3.62
2280 2497 2.790433 GGTGGAGTGTATGCTTTGGAA 58.210 47.619 0.00 0.00 0.00 3.53
2281 2498 1.338674 CGGTGGAGTGTATGCTTTGGA 60.339 52.381 0.00 0.00 0.00 3.53
2282 2499 1.086696 CGGTGGAGTGTATGCTTTGG 58.913 55.000 0.00 0.00 0.00 3.28
2283 2500 1.086696 CCGGTGGAGTGTATGCTTTG 58.913 55.000 0.00 0.00 0.00 2.77
2284 2501 0.690762 ACCGGTGGAGTGTATGCTTT 59.309 50.000 6.12 0.00 0.00 3.51
2285 2502 0.249398 GACCGGTGGAGTGTATGCTT 59.751 55.000 14.63 0.00 0.00 3.91
2286 2503 0.902984 TGACCGGTGGAGTGTATGCT 60.903 55.000 14.63 0.00 0.00 3.79
2287 2504 0.739813 GTGACCGGTGGAGTGTATGC 60.740 60.000 14.63 0.00 0.00 3.14
2288 2505 0.108329 GGTGACCGGTGGAGTGTATG 60.108 60.000 14.63 0.00 0.00 2.39
2289 2506 0.252103 AGGTGACCGGTGGAGTGTAT 60.252 55.000 14.63 0.00 0.00 2.29
2290 2507 1.154454 AGGTGACCGGTGGAGTGTA 59.846 57.895 14.63 0.00 0.00 2.90
2291 2508 2.122989 AGGTGACCGGTGGAGTGT 60.123 61.111 14.63 0.00 0.00 3.55
2292 2509 1.754380 TTCAGGTGACCGGTGGAGTG 61.754 60.000 14.63 4.30 0.00 3.51
2293 2510 1.052124 TTTCAGGTGACCGGTGGAGT 61.052 55.000 14.63 0.00 0.00 3.85
2294 2511 0.602905 GTTTCAGGTGACCGGTGGAG 60.603 60.000 14.63 0.00 0.00 3.86
2295 2512 1.338890 TGTTTCAGGTGACCGGTGGA 61.339 55.000 14.63 0.00 0.00 4.02
2296 2513 0.884704 CTGTTTCAGGTGACCGGTGG 60.885 60.000 14.63 0.00 0.00 4.61
2297 2514 0.105964 TCTGTTTCAGGTGACCGGTG 59.894 55.000 14.63 0.00 31.51 4.94
2298 2515 0.834612 TTCTGTTTCAGGTGACCGGT 59.165 50.000 6.92 6.92 31.51 5.28
2299 2516 3.698250 TTCTGTTTCAGGTGACCGG 57.302 52.632 0.00 0.00 31.51 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.