Multiple sequence alignment - TraesCS2B01G492900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G492900 chr2B 100.000 3739 0 0 1 3739 690910363 690906625 0.000000e+00 6905
1 TraesCS2B01G492900 chr2B 98.044 409 8 0 1 409 121438181 121438589 0.000000e+00 712
2 TraesCS2B01G492900 chr2B 89.756 205 20 1 3492 3696 44194682 44194885 1.030000e-65 261
3 TraesCS2B01G492900 chr2A 92.275 2602 126 22 471 3033 712983317 712980752 0.000000e+00 3622
4 TraesCS2B01G492900 chr2D 92.638 2350 90 23 471 2766 574633763 574631443 0.000000e+00 3304
5 TraesCS2B01G492900 chr2D 93.719 398 11 3 1015 1412 574566046 574565663 5.380000e-163 584
6 TraesCS2B01G492900 chr2D 88.487 304 30 4 3185 3486 227479660 227479960 2.740000e-96 363
7 TraesCS2B01G492900 chr6B 98.044 409 7 1 1 409 586515991 586516398 0.000000e+00 710
8 TraesCS2B01G492900 chr6B 90.493 284 24 3 3187 3468 403128834 403129116 4.560000e-99 372
9 TraesCS2B01G492900 chr6B 85.837 233 29 4 3492 3721 403129294 403129525 1.040000e-60 244
10 TraesCS2B01G492900 chr4A 97.810 411 8 1 1 410 689504825 689505235 0.000000e+00 708
11 TraesCS2B01G492900 chr4A 88.889 306 31 3 3182 3486 602632647 602632950 1.270000e-99 374
12 TraesCS2B01G492900 chr3A 97.311 409 11 0 1 409 61453430 61453022 0.000000e+00 695
13 TraesCS2B01G492900 chr3A 90.741 216 18 2 3492 3706 650411019 650410805 1.700000e-73 287
14 TraesCS2B01G492900 chr3B 97.073 410 11 1 1 410 712086195 712085787 0.000000e+00 689
15 TraesCS2B01G492900 chrUn 96.837 411 13 0 1 411 342234485 342234075 0.000000e+00 688
16 TraesCS2B01G492900 chr5A 96.333 409 15 0 1 409 703348307 703348715 0.000000e+00 673
17 TraesCS2B01G492900 chr1D 95.122 410 19 1 1 410 469078066 469077658 0.000000e+00 645
18 TraesCS2B01G492900 chr3D 95.110 409 19 1 1 409 608233911 608234318 0.000000e+00 643
19 TraesCS2B01G492900 chr3D 88.746 311 29 4 3178 3483 17282592 17282283 3.530000e-100 375
20 TraesCS2B01G492900 chr3D 89.216 306 25 4 3185 3482 17309188 17308883 3.530000e-100 375
21 TraesCS2B01G492900 chr3D 89.516 248 22 3 3492 3737 47519684 47519439 1.010000e-80 311
22 TraesCS2B01G492900 chr3D 86.328 256 25 7 3492 3739 17282202 17281949 1.710000e-68 270
23 TraesCS2B01G492900 chr3D 89.623 212 19 3 3495 3705 17308820 17308611 2.210000e-67 267
24 TraesCS2B01G492900 chr6D 81.961 571 75 17 3179 3735 236404921 236405477 3.400000e-125 459
25 TraesCS2B01G492900 chr4D 83.445 447 60 11 3300 3737 224285845 224285404 1.620000e-108 403
26 TraesCS2B01G492900 chr4D 90.357 280 25 2 3185 3463 219630823 219630545 2.120000e-97 366
27 TraesCS2B01G492900 chr4D 89.450 218 21 2 3492 3708 219630424 219630208 1.320000e-69 274
28 TraesCS2B01G492900 chr5D 88.065 310 33 4 3178 3486 556895646 556895340 7.630000e-97 364
29 TraesCS2B01G492900 chr5D 84.375 256 30 7 3492 3739 554579099 554579352 3.730000e-60 243
30 TraesCS2B01G492900 chr7D 87.859 313 32 6 3178 3486 359540972 359541282 2.740000e-96 363


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G492900 chr2B 690906625 690910363 3738 True 6905.0 6905 100.0000 1 3739 1 chr2B.!!$R1 3738
1 TraesCS2B01G492900 chr2A 712980752 712983317 2565 True 3622.0 3622 92.2750 471 3033 1 chr2A.!!$R1 2562
2 TraesCS2B01G492900 chr2D 574631443 574633763 2320 True 3304.0 3304 92.6380 471 2766 1 chr2D.!!$R2 2295
3 TraesCS2B01G492900 chr6B 403128834 403129525 691 False 308.0 372 88.1650 3187 3721 2 chr6B.!!$F2 534
4 TraesCS2B01G492900 chr3D 17281949 17282592 643 True 322.5 375 87.5370 3178 3739 2 chr3D.!!$R2 561
5 TraesCS2B01G492900 chr3D 17308611 17309188 577 True 321.0 375 89.4195 3185 3705 2 chr3D.!!$R3 520
6 TraesCS2B01G492900 chr6D 236404921 236405477 556 False 459.0 459 81.9610 3179 3735 1 chr6D.!!$F1 556
7 TraesCS2B01G492900 chr4D 219630208 219630823 615 True 320.0 366 89.9035 3185 3708 2 chr4D.!!$R2 523

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
35 36 0.036765 GCCGTCTACATGTCCACCAA 60.037 55.0 0.00 0.00 0.0 3.67 F
1424 1455 0.036732 TACCTGGTGAGCTTGCCTTG 59.963 55.0 10.23 3.24 0.0 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1942 1996 0.393402 TGTCCATCTCCTGCATGCAC 60.393 55.0 18.46 4.08 0.0 4.57 R
3119 3203 0.037605 CGGGCTCGTAGGTGAAGTTT 60.038 55.0 0.00 0.00 0.0 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.764049 GACAACGTCAGCGCCGTC 61.764 66.667 10.53 0.00 42.83 4.79
22 23 4.280494 ACAACGTCAGCGCCGTCT 62.280 61.111 10.53 0.00 42.83 4.18
23 24 2.126618 CAACGTCAGCGCCGTCTA 60.127 61.111 10.53 0.00 42.83 2.59
24 25 2.126580 AACGTCAGCGCCGTCTAC 60.127 61.111 10.53 0.00 42.83 2.59
25 26 2.911484 AACGTCAGCGCCGTCTACA 61.911 57.895 10.53 0.00 42.83 2.74
26 27 2.102357 CGTCAGCGCCGTCTACAT 59.898 61.111 2.29 0.00 0.00 2.29
27 28 2.224217 CGTCAGCGCCGTCTACATG 61.224 63.158 2.29 0.00 0.00 3.21
28 29 1.153823 GTCAGCGCCGTCTACATGT 60.154 57.895 2.29 2.69 0.00 3.21
29 30 1.138883 TCAGCGCCGTCTACATGTC 59.861 57.895 2.29 0.00 0.00 3.06
30 31 1.878522 CAGCGCCGTCTACATGTCC 60.879 63.158 2.29 0.00 0.00 4.02
31 32 2.183300 GCGCCGTCTACATGTCCA 59.817 61.111 0.00 0.00 0.00 4.02
32 33 2.165301 GCGCCGTCTACATGTCCAC 61.165 63.158 0.00 0.00 0.00 4.02
33 34 1.518572 CGCCGTCTACATGTCCACC 60.519 63.158 0.00 0.00 0.00 4.61
34 35 1.594833 GCCGTCTACATGTCCACCA 59.405 57.895 0.00 0.00 0.00 4.17
35 36 0.036765 GCCGTCTACATGTCCACCAA 60.037 55.000 0.00 0.00 0.00 3.67
36 37 1.722011 CCGTCTACATGTCCACCAAC 58.278 55.000 0.00 0.00 0.00 3.77
37 38 1.674817 CCGTCTACATGTCCACCAACC 60.675 57.143 0.00 0.00 0.00 3.77
38 39 1.674817 CGTCTACATGTCCACCAACCC 60.675 57.143 0.00 0.00 0.00 4.11
39 40 0.988832 TCTACATGTCCACCAACCCC 59.011 55.000 0.00 0.00 0.00 4.95
40 41 0.392461 CTACATGTCCACCAACCCCG 60.392 60.000 0.00 0.00 0.00 5.73
41 42 1.128809 TACATGTCCACCAACCCCGT 61.129 55.000 0.00 0.00 0.00 5.28
42 43 1.228429 CATGTCCACCAACCCCGTT 60.228 57.895 0.00 0.00 0.00 4.44
43 44 1.074248 ATGTCCACCAACCCCGTTC 59.926 57.895 0.00 0.00 0.00 3.95
44 45 1.710996 ATGTCCACCAACCCCGTTCA 61.711 55.000 0.00 0.00 0.00 3.18
45 46 1.599797 GTCCACCAACCCCGTTCAG 60.600 63.158 0.00 0.00 0.00 3.02
46 47 2.983592 CCACCAACCCCGTTCAGC 60.984 66.667 0.00 0.00 0.00 4.26
47 48 2.203280 CACCAACCCCGTTCAGCA 60.203 61.111 0.00 0.00 0.00 4.41
48 49 1.603455 CACCAACCCCGTTCAGCAT 60.603 57.895 0.00 0.00 0.00 3.79
49 50 1.303317 ACCAACCCCGTTCAGCATC 60.303 57.895 0.00 0.00 0.00 3.91
50 51 1.303236 CCAACCCCGTTCAGCATCA 60.303 57.895 0.00 0.00 0.00 3.07
51 52 1.308069 CCAACCCCGTTCAGCATCAG 61.308 60.000 0.00 0.00 0.00 2.90
52 53 1.675641 AACCCCGTTCAGCATCAGC 60.676 57.895 0.00 0.00 42.56 4.26
63 64 3.676091 GCATCAGCGTACCAAACAC 57.324 52.632 0.00 0.00 0.00 3.32
64 65 0.871722 GCATCAGCGTACCAAACACA 59.128 50.000 0.00 0.00 0.00 3.72
65 66 1.468520 GCATCAGCGTACCAAACACAT 59.531 47.619 0.00 0.00 0.00 3.21
66 67 2.476185 GCATCAGCGTACCAAACACATC 60.476 50.000 0.00 0.00 0.00 3.06
67 68 1.424403 TCAGCGTACCAAACACATCG 58.576 50.000 0.00 0.00 0.00 3.84
68 69 1.000052 TCAGCGTACCAAACACATCGA 60.000 47.619 0.00 0.00 0.00 3.59
69 70 1.795872 CAGCGTACCAAACACATCGAA 59.204 47.619 0.00 0.00 0.00 3.71
70 71 2.222213 CAGCGTACCAAACACATCGAAA 59.778 45.455 0.00 0.00 0.00 3.46
71 72 3.071479 AGCGTACCAAACACATCGAAAT 58.929 40.909 0.00 0.00 0.00 2.17
72 73 3.124636 AGCGTACCAAACACATCGAAATC 59.875 43.478 0.00 0.00 0.00 2.17
73 74 3.655581 CGTACCAAACACATCGAAATCG 58.344 45.455 0.00 0.00 41.45 3.34
85 86 3.066369 TCGAAATCGATCTCCACTTCG 57.934 47.619 17.36 17.36 44.22 3.79
86 87 2.422479 TCGAAATCGATCTCCACTTCGT 59.578 45.455 20.77 0.00 44.22 3.85
87 88 3.119602 TCGAAATCGATCTCCACTTCGTT 60.120 43.478 20.77 0.39 44.22 3.85
88 89 3.240861 CGAAATCGATCTCCACTTCGTTC 59.759 47.826 15.90 4.78 43.02 3.95
89 90 2.476873 ATCGATCTCCACTTCGTTCG 57.523 50.000 0.00 0.00 36.74 3.95
90 91 0.179171 TCGATCTCCACTTCGTTCGC 60.179 55.000 0.00 0.00 36.74 4.70
91 92 1.464429 CGATCTCCACTTCGTTCGCG 61.464 60.000 0.00 0.00 42.98 5.87
100 101 3.443546 TCGTTCGCGATCGTGTTG 58.556 55.556 31.48 17.29 45.62 3.33
101 102 2.275202 CGTTCGCGATCGTGTTGC 60.275 61.111 26.80 16.46 44.71 4.17
102 103 2.095843 GTTCGCGATCGTGTTGCC 59.904 61.111 26.40 10.45 36.96 4.52
103 104 2.356433 TTCGCGATCGTGTTGCCA 60.356 55.556 26.40 5.73 36.96 4.92
104 105 1.739929 TTCGCGATCGTGTTGCCAT 60.740 52.632 26.40 0.00 36.96 4.40
105 106 1.965391 TTCGCGATCGTGTTGCCATG 61.965 55.000 26.40 2.06 36.96 3.66
106 107 2.404789 GCGATCGTGTTGCCATGG 59.595 61.111 17.81 7.63 0.00 3.66
107 108 3.101209 CGATCGTGTTGCCATGGG 58.899 61.111 15.13 0.00 0.00 4.00
108 109 1.745115 CGATCGTGTTGCCATGGGT 60.745 57.895 15.13 0.00 0.00 4.51
109 110 1.705337 CGATCGTGTTGCCATGGGTC 61.705 60.000 15.13 0.00 0.00 4.46
110 111 0.676466 GATCGTGTTGCCATGGGTCA 60.676 55.000 15.13 0.00 0.00 4.02
111 112 0.677731 ATCGTGTTGCCATGGGTCAG 60.678 55.000 15.13 0.00 0.00 3.51
112 113 2.334946 CGTGTTGCCATGGGTCAGG 61.335 63.158 15.13 0.00 0.00 3.86
113 114 1.228552 GTGTTGCCATGGGTCAGGT 60.229 57.895 15.13 0.00 0.00 4.00
114 115 1.074775 TGTTGCCATGGGTCAGGTC 59.925 57.895 15.13 0.00 0.00 3.85
115 116 1.678970 GTTGCCATGGGTCAGGTCC 60.679 63.158 15.13 0.00 0.00 4.46
116 117 3.266686 TTGCCATGGGTCAGGTCCG 62.267 63.158 15.13 0.00 0.00 4.79
117 118 3.717294 GCCATGGGTCAGGTCCGT 61.717 66.667 15.13 0.00 0.00 4.69
118 119 2.268920 CCATGGGTCAGGTCCGTG 59.731 66.667 2.85 0.00 40.14 4.94
119 120 2.592993 CCATGGGTCAGGTCCGTGT 61.593 63.158 2.85 0.00 39.11 4.49
120 121 1.375908 CATGGGTCAGGTCCGTGTG 60.376 63.158 0.00 0.00 36.73 3.82
121 122 3.254024 ATGGGTCAGGTCCGTGTGC 62.254 63.158 0.00 0.00 0.00 4.57
122 123 3.626924 GGGTCAGGTCCGTGTGCT 61.627 66.667 0.00 0.00 0.00 4.40
123 124 2.357517 GGTCAGGTCCGTGTGCTG 60.358 66.667 0.00 0.00 0.00 4.41
124 125 3.044305 GTCAGGTCCGTGTGCTGC 61.044 66.667 0.00 0.00 0.00 5.25
125 126 3.545574 TCAGGTCCGTGTGCTGCA 61.546 61.111 0.00 0.00 0.00 4.41
126 127 2.359107 CAGGTCCGTGTGCTGCAT 60.359 61.111 5.27 0.00 0.00 3.96
127 128 2.359107 AGGTCCGTGTGCTGCATG 60.359 61.111 5.27 0.00 0.00 4.06
128 129 2.669569 GGTCCGTGTGCTGCATGT 60.670 61.111 5.27 0.00 32.30 3.21
129 130 2.260869 GGTCCGTGTGCTGCATGTT 61.261 57.895 5.27 0.00 32.30 2.71
130 131 1.207593 GTCCGTGTGCTGCATGTTC 59.792 57.895 5.27 0.00 32.30 3.18
131 132 1.965930 TCCGTGTGCTGCATGTTCC 60.966 57.895 5.27 0.00 32.30 3.62
132 133 2.562912 CGTGTGCTGCATGTTCCC 59.437 61.111 5.27 0.00 0.00 3.97
133 134 1.968017 CGTGTGCTGCATGTTCCCT 60.968 57.895 5.27 0.00 0.00 4.20
134 135 1.878775 GTGTGCTGCATGTTCCCTC 59.121 57.895 5.27 0.00 0.00 4.30
135 136 1.672030 TGTGCTGCATGTTCCCTCG 60.672 57.895 5.27 0.00 0.00 4.63
136 137 1.672356 GTGCTGCATGTTCCCTCGT 60.672 57.895 5.27 0.00 0.00 4.18
137 138 1.375908 TGCTGCATGTTCCCTCGTC 60.376 57.895 0.00 0.00 0.00 4.20
138 139 1.375908 GCTGCATGTTCCCTCGTCA 60.376 57.895 0.00 0.00 0.00 4.35
139 140 1.639298 GCTGCATGTTCCCTCGTCAC 61.639 60.000 0.00 0.00 0.00 3.67
140 141 1.354337 CTGCATGTTCCCTCGTCACG 61.354 60.000 0.00 0.00 0.00 4.35
141 142 2.740714 GCATGTTCCCTCGTCACGC 61.741 63.158 0.00 0.00 0.00 5.34
142 143 2.100631 CATGTTCCCTCGTCACGCC 61.101 63.158 0.00 0.00 0.00 5.68
143 144 2.579657 ATGTTCCCTCGTCACGCCA 61.580 57.895 0.00 0.00 0.00 5.69
144 145 2.432628 GTTCCCTCGTCACGCCAG 60.433 66.667 0.00 0.00 0.00 4.85
145 146 2.915659 TTCCCTCGTCACGCCAGT 60.916 61.111 0.00 0.00 0.00 4.00
146 147 2.504274 TTCCCTCGTCACGCCAGTT 61.504 57.895 0.00 0.00 0.00 3.16
147 148 2.030562 CCCTCGTCACGCCAGTTT 59.969 61.111 0.00 0.00 0.00 2.66
148 149 2.317609 CCCTCGTCACGCCAGTTTG 61.318 63.158 0.00 0.00 0.00 2.93
149 150 2.551270 CTCGTCACGCCAGTTTGC 59.449 61.111 0.00 0.00 0.00 3.68
150 151 2.954753 CTCGTCACGCCAGTTTGCC 61.955 63.158 0.00 0.00 0.00 4.52
151 152 4.368808 CGTCACGCCAGTTTGCCG 62.369 66.667 0.00 0.00 0.00 5.69
152 153 2.970324 GTCACGCCAGTTTGCCGA 60.970 61.111 0.00 0.00 0.00 5.54
153 154 2.970324 TCACGCCAGTTTGCCGAC 60.970 61.111 0.00 0.00 0.00 4.79
154 155 3.276091 CACGCCAGTTTGCCGACA 61.276 61.111 0.00 0.00 0.00 4.35
155 156 2.281484 ACGCCAGTTTGCCGACAT 60.281 55.556 0.00 0.00 0.00 3.06
156 157 2.325082 ACGCCAGTTTGCCGACATC 61.325 57.895 0.00 0.00 0.00 3.06
157 158 2.034879 CGCCAGTTTGCCGACATCT 61.035 57.895 0.00 0.00 0.00 2.90
158 159 1.577328 CGCCAGTTTGCCGACATCTT 61.577 55.000 0.00 0.00 0.00 2.40
159 160 0.109597 GCCAGTTTGCCGACATCTTG 60.110 55.000 0.00 0.00 0.00 3.02
160 161 1.522668 CCAGTTTGCCGACATCTTGA 58.477 50.000 0.00 0.00 0.00 3.02
161 162 1.197721 CCAGTTTGCCGACATCTTGAC 59.802 52.381 0.00 0.00 0.00 3.18
162 163 1.136252 CAGTTTGCCGACATCTTGACG 60.136 52.381 0.00 0.00 35.47 4.35
163 164 1.144969 GTTTGCCGACATCTTGACGA 58.855 50.000 0.00 0.00 37.72 4.20
164 165 1.529438 GTTTGCCGACATCTTGACGAA 59.471 47.619 0.00 0.00 37.72 3.85
165 166 1.428448 TTGCCGACATCTTGACGAAG 58.572 50.000 0.00 0.00 37.72 3.79
166 167 0.389817 TGCCGACATCTTGACGAAGG 60.390 55.000 0.00 0.00 37.72 3.46
167 168 1.084370 GCCGACATCTTGACGAAGGG 61.084 60.000 0.00 0.00 37.72 3.95
168 169 1.084370 CCGACATCTTGACGAAGGGC 61.084 60.000 0.00 0.00 37.72 5.19
169 170 1.084370 CGACATCTTGACGAAGGGCC 61.084 60.000 0.00 0.00 37.72 5.80
170 171 0.250513 GACATCTTGACGAAGGGCCT 59.749 55.000 0.00 0.00 0.00 5.19
171 172 0.250513 ACATCTTGACGAAGGGCCTC 59.749 55.000 6.46 0.00 0.00 4.70
172 173 0.462759 CATCTTGACGAAGGGCCTCC 60.463 60.000 6.46 0.00 0.00 4.30
173 174 1.627297 ATCTTGACGAAGGGCCTCCC 61.627 60.000 6.46 0.29 45.90 4.30
185 186 4.675029 CCTCCCGTCGCCGTTGTT 62.675 66.667 0.00 0.00 0.00 2.83
186 187 2.663852 CTCCCGTCGCCGTTGTTT 60.664 61.111 0.00 0.00 0.00 2.83
187 188 2.662527 TCCCGTCGCCGTTGTTTC 60.663 61.111 0.00 0.00 0.00 2.78
188 189 2.663852 CCCGTCGCCGTTGTTTCT 60.664 61.111 0.00 0.00 0.00 2.52
189 190 2.549282 CCGTCGCCGTTGTTTCTG 59.451 61.111 0.00 0.00 0.00 3.02
190 191 2.549282 CGTCGCCGTTGTTTCTGG 59.451 61.111 0.00 0.00 0.00 3.86
191 192 1.952133 CGTCGCCGTTGTTTCTGGA 60.952 57.895 0.00 0.00 0.00 3.86
192 193 1.289109 CGTCGCCGTTGTTTCTGGAT 61.289 55.000 0.00 0.00 0.00 3.41
193 194 0.872388 GTCGCCGTTGTTTCTGGATT 59.128 50.000 0.00 0.00 0.00 3.01
194 195 1.265905 GTCGCCGTTGTTTCTGGATTT 59.734 47.619 0.00 0.00 0.00 2.17
195 196 1.950909 TCGCCGTTGTTTCTGGATTTT 59.049 42.857 0.00 0.00 0.00 1.82
196 197 2.031508 TCGCCGTTGTTTCTGGATTTTC 60.032 45.455 0.00 0.00 0.00 2.29
197 198 2.315901 GCCGTTGTTTCTGGATTTTCG 58.684 47.619 0.00 0.00 0.00 3.46
198 199 2.920647 GCCGTTGTTTCTGGATTTTCGG 60.921 50.000 0.00 0.00 38.67 4.30
199 200 2.292292 CCGTTGTTTCTGGATTTTCGGT 59.708 45.455 0.00 0.00 0.00 4.69
200 201 3.551551 CGTTGTTTCTGGATTTTCGGTC 58.448 45.455 0.00 0.00 0.00 4.79
201 202 3.608474 CGTTGTTTCTGGATTTTCGGTCC 60.608 47.826 0.00 0.00 36.26 4.46
202 203 3.216187 TGTTTCTGGATTTTCGGTCCA 57.784 42.857 0.00 0.00 43.26 4.02
207 208 2.762535 TGGATTTTCGGTCCAGTCTC 57.237 50.000 0.00 0.00 40.72 3.36
208 209 1.974957 TGGATTTTCGGTCCAGTCTCA 59.025 47.619 0.00 0.00 40.72 3.27
209 210 2.370519 TGGATTTTCGGTCCAGTCTCAA 59.629 45.455 0.00 0.00 40.72 3.02
210 211 2.742589 GGATTTTCGGTCCAGTCTCAAC 59.257 50.000 0.00 0.00 35.76 3.18
211 212 1.860676 TTTTCGGTCCAGTCTCAACG 58.139 50.000 0.00 0.00 0.00 4.10
212 213 0.748450 TTTCGGTCCAGTCTCAACGT 59.252 50.000 0.00 0.00 0.00 3.99
213 214 0.313043 TTCGGTCCAGTCTCAACGTC 59.687 55.000 0.00 0.00 0.00 4.34
214 215 1.080705 CGGTCCAGTCTCAACGTCC 60.081 63.158 0.00 0.00 0.00 4.79
215 216 1.080705 GGTCCAGTCTCAACGTCCG 60.081 63.158 0.00 0.00 0.00 4.79
216 217 1.733399 GTCCAGTCTCAACGTCCGC 60.733 63.158 0.00 0.00 0.00 5.54
217 218 1.901948 TCCAGTCTCAACGTCCGCT 60.902 57.895 0.00 0.00 0.00 5.52
218 219 1.444553 CCAGTCTCAACGTCCGCTC 60.445 63.158 0.00 0.00 0.00 5.03
219 220 1.581954 CAGTCTCAACGTCCGCTCT 59.418 57.895 0.00 0.00 0.00 4.09
220 221 0.455295 CAGTCTCAACGTCCGCTCTC 60.455 60.000 0.00 0.00 0.00 3.20
221 222 1.153997 GTCTCAACGTCCGCTCTCC 60.154 63.158 0.00 0.00 0.00 3.71
222 223 1.303398 TCTCAACGTCCGCTCTCCT 60.303 57.895 0.00 0.00 0.00 3.69
223 224 1.137825 CTCAACGTCCGCTCTCCTC 59.862 63.158 0.00 0.00 0.00 3.71
224 225 2.182030 CAACGTCCGCTCTCCTCC 59.818 66.667 0.00 0.00 0.00 4.30
225 226 3.069318 AACGTCCGCTCTCCTCCC 61.069 66.667 0.00 0.00 0.00 4.30
228 229 3.069318 GTCCGCTCTCCTCCCGTT 61.069 66.667 0.00 0.00 0.00 4.44
229 230 3.068691 TCCGCTCTCCTCCCGTTG 61.069 66.667 0.00 0.00 0.00 4.10
230 231 3.382832 CCGCTCTCCTCCCGTTGT 61.383 66.667 0.00 0.00 0.00 3.32
231 232 2.125912 CGCTCTCCTCCCGTTGTG 60.126 66.667 0.00 0.00 0.00 3.33
232 233 2.636412 CGCTCTCCTCCCGTTGTGA 61.636 63.158 0.00 0.00 0.00 3.58
233 234 1.079750 GCTCTCCTCCCGTTGTGAC 60.080 63.158 0.00 0.00 0.00 3.67
234 235 1.536943 GCTCTCCTCCCGTTGTGACT 61.537 60.000 0.00 0.00 0.00 3.41
235 236 0.244994 CTCTCCTCCCGTTGTGACTG 59.755 60.000 0.00 0.00 0.00 3.51
236 237 1.374758 CTCCTCCCGTTGTGACTGC 60.375 63.158 0.00 0.00 0.00 4.40
237 238 2.738521 CCTCCCGTTGTGACTGCG 60.739 66.667 0.00 0.00 0.00 5.18
238 239 2.738521 CTCCCGTTGTGACTGCGG 60.739 66.667 10.47 10.47 44.55 5.69
242 243 4.308458 CGTTGTGACTGCGGGGGA 62.308 66.667 0.00 0.00 0.00 4.81
243 244 2.358737 GTTGTGACTGCGGGGGAG 60.359 66.667 0.00 0.00 0.00 4.30
244 245 2.847234 TTGTGACTGCGGGGGAGT 60.847 61.111 0.00 0.00 36.81 3.85
245 246 3.177194 TTGTGACTGCGGGGGAGTG 62.177 63.158 0.00 0.00 33.56 3.51
246 247 3.626924 GTGACTGCGGGGGAGTGT 61.627 66.667 0.00 0.00 33.56 3.55
247 248 2.847234 TGACTGCGGGGGAGTGTT 60.847 61.111 0.00 0.00 33.56 3.32
248 249 1.534476 TGACTGCGGGGGAGTGTTA 60.534 57.895 0.00 0.00 33.56 2.41
249 250 1.218316 GACTGCGGGGGAGTGTTAG 59.782 63.158 0.00 0.00 33.56 2.34
250 251 1.229082 ACTGCGGGGGAGTGTTAGA 60.229 57.895 0.00 0.00 31.84 2.10
251 252 1.218316 CTGCGGGGGAGTGTTAGAC 59.782 63.158 0.00 0.00 0.00 2.59
252 253 1.229082 TGCGGGGGAGTGTTAGACT 60.229 57.895 0.00 0.00 37.76 3.24
253 254 0.040058 TGCGGGGGAGTGTTAGACTA 59.960 55.000 0.00 0.00 33.83 2.59
254 255 1.188863 GCGGGGGAGTGTTAGACTAA 58.811 55.000 0.00 0.00 33.83 2.24
255 256 1.761198 GCGGGGGAGTGTTAGACTAAT 59.239 52.381 0.00 0.00 33.83 1.73
256 257 2.961062 GCGGGGGAGTGTTAGACTAATA 59.039 50.000 0.00 0.00 33.83 0.98
257 258 3.577415 GCGGGGGAGTGTTAGACTAATAT 59.423 47.826 0.00 0.00 33.83 1.28
258 259 4.560919 GCGGGGGAGTGTTAGACTAATATG 60.561 50.000 0.00 0.00 33.83 1.78
259 260 4.587684 CGGGGGAGTGTTAGACTAATATGT 59.412 45.833 0.00 0.00 33.83 2.29
260 261 5.278858 CGGGGGAGTGTTAGACTAATATGTC 60.279 48.000 0.00 0.00 33.83 3.06
261 262 5.601313 GGGGGAGTGTTAGACTAATATGTCA 59.399 44.000 0.00 0.00 39.27 3.58
262 263 6.462628 GGGGGAGTGTTAGACTAATATGTCAC 60.463 46.154 0.00 1.94 39.27 3.67
263 264 6.207213 GGGAGTGTTAGACTAATATGTCACG 58.793 44.000 0.00 0.00 39.27 4.35
264 265 6.183360 GGGAGTGTTAGACTAATATGTCACGT 60.183 42.308 0.00 0.00 39.27 4.49
265 266 7.012704 GGGAGTGTTAGACTAATATGTCACGTA 59.987 40.741 0.00 0.00 39.27 3.57
266 267 8.566260 GGAGTGTTAGACTAATATGTCACGTAT 58.434 37.037 0.00 0.00 39.27 3.06
267 268 9.596677 GAGTGTTAGACTAATATGTCACGTATC 57.403 37.037 0.00 0.00 39.27 2.24
268 269 8.281194 AGTGTTAGACTAATATGTCACGTATCG 58.719 37.037 0.00 0.00 39.27 2.92
269 270 8.066595 GTGTTAGACTAATATGTCACGTATCGT 58.933 37.037 0.00 0.00 42.36 3.73
285 286 7.074507 ACGTATCGTGACATATCTCCTAATC 57.925 40.000 0.00 0.00 39.18 1.75
286 287 6.093771 ACGTATCGTGACATATCTCCTAATCC 59.906 42.308 0.00 0.00 39.18 3.01
287 288 5.923733 ATCGTGACATATCTCCTAATCCC 57.076 43.478 0.00 0.00 0.00 3.85
288 289 4.087182 TCGTGACATATCTCCTAATCCCC 58.913 47.826 0.00 0.00 0.00 4.81
289 290 4.090090 CGTGACATATCTCCTAATCCCCT 58.910 47.826 0.00 0.00 0.00 4.79
290 291 5.014860 TCGTGACATATCTCCTAATCCCCTA 59.985 44.000 0.00 0.00 0.00 3.53
291 292 5.715279 CGTGACATATCTCCTAATCCCCTAA 59.285 44.000 0.00 0.00 0.00 2.69
292 293 6.210784 CGTGACATATCTCCTAATCCCCTAAA 59.789 42.308 0.00 0.00 0.00 1.85
293 294 7.093289 CGTGACATATCTCCTAATCCCCTAAAT 60.093 40.741 0.00 0.00 0.00 1.40
294 295 8.261522 GTGACATATCTCCTAATCCCCTAAATC 58.738 40.741 0.00 0.00 0.00 2.17
295 296 7.124298 TGACATATCTCCTAATCCCCTAAATCG 59.876 40.741 0.00 0.00 0.00 3.34
296 297 7.189794 ACATATCTCCTAATCCCCTAAATCGA 58.810 38.462 0.00 0.00 0.00 3.59
297 298 7.343316 ACATATCTCCTAATCCCCTAAATCGAG 59.657 40.741 0.00 0.00 0.00 4.04
298 299 4.417437 TCTCCTAATCCCCTAAATCGAGG 58.583 47.826 0.00 0.00 36.23 4.63
299 300 4.107473 TCTCCTAATCCCCTAAATCGAGGA 59.893 45.833 0.00 0.00 39.15 3.71
300 301 4.417437 TCCTAATCCCCTAAATCGAGGAG 58.583 47.826 0.00 0.00 39.15 3.69
301 302 4.140758 TCCTAATCCCCTAAATCGAGGAGT 60.141 45.833 0.00 0.00 39.15 3.85
302 303 5.075483 TCCTAATCCCCTAAATCGAGGAGTA 59.925 44.000 0.00 0.00 39.15 2.59
303 304 5.958987 CCTAATCCCCTAAATCGAGGAGTAT 59.041 44.000 0.00 0.00 39.15 2.12
304 305 6.097129 CCTAATCCCCTAAATCGAGGAGTATC 59.903 46.154 0.00 0.00 39.15 2.24
305 306 3.418995 TCCCCTAAATCGAGGAGTATCG 58.581 50.000 0.00 0.00 44.07 2.92
316 317 5.758924 TCGAGGAGTATCGATATTGTTGTG 58.241 41.667 8.66 0.00 46.20 3.33
317 318 5.529800 TCGAGGAGTATCGATATTGTTGTGA 59.470 40.000 8.66 0.00 46.20 3.58
318 319 6.206829 TCGAGGAGTATCGATATTGTTGTGAT 59.793 38.462 8.66 0.00 46.20 3.06
319 320 6.524933 CGAGGAGTATCGATATTGTTGTGATC 59.475 42.308 8.66 0.00 45.56 2.92
320 321 7.531857 AGGAGTATCGATATTGTTGTGATCT 57.468 36.000 8.66 0.00 34.37 2.75
321 322 7.957002 AGGAGTATCGATATTGTTGTGATCTT 58.043 34.615 8.66 0.00 34.37 2.40
322 323 8.085296 AGGAGTATCGATATTGTTGTGATCTTC 58.915 37.037 8.66 0.00 34.37 2.87
323 324 7.329717 GGAGTATCGATATTGTTGTGATCTTCC 59.670 40.741 8.66 0.00 34.37 3.46
324 325 7.726216 AGTATCGATATTGTTGTGATCTTCCA 58.274 34.615 8.66 0.00 0.00 3.53
325 326 8.370940 AGTATCGATATTGTTGTGATCTTCCAT 58.629 33.333 8.66 0.00 0.00 3.41
326 327 8.993121 GTATCGATATTGTTGTGATCTTCCATT 58.007 33.333 8.66 0.00 0.00 3.16
327 328 7.864108 TCGATATTGTTGTGATCTTCCATTT 57.136 32.000 0.00 0.00 0.00 2.32
328 329 8.956533 TCGATATTGTTGTGATCTTCCATTTA 57.043 30.769 0.00 0.00 0.00 1.40
329 330 9.559732 TCGATATTGTTGTGATCTTCCATTTAT 57.440 29.630 0.00 0.00 0.00 1.40
330 331 9.603298 CGATATTGTTGTGATCTTCCATTTATG 57.397 33.333 0.00 0.00 0.00 1.90
382 383 4.806640 CATGTAATGGAAAAGCCCAAGT 57.193 40.909 0.00 0.00 41.79 3.16
383 384 4.497300 CATGTAATGGAAAAGCCCAAGTG 58.503 43.478 0.00 0.00 41.79 3.16
384 385 3.571590 TGTAATGGAAAAGCCCAAGTGT 58.428 40.909 0.00 0.00 40.04 3.55
385 386 3.320541 TGTAATGGAAAAGCCCAAGTGTG 59.679 43.478 0.00 0.00 40.04 3.82
386 387 1.341080 ATGGAAAAGCCCAAGTGTGG 58.659 50.000 0.00 0.00 45.53 4.17
397 398 4.376340 CCCAAGTGTGGCAAATATTCTC 57.624 45.455 0.00 0.00 44.46 2.87
398 399 3.131046 CCCAAGTGTGGCAAATATTCTCC 59.869 47.826 0.00 0.00 44.46 3.71
399 400 3.763360 CCAAGTGTGGCAAATATTCTCCA 59.237 43.478 4.93 4.93 38.35 3.86
400 401 4.220382 CCAAGTGTGGCAAATATTCTCCAA 59.780 41.667 9.44 0.81 38.35 3.53
401 402 5.279406 CCAAGTGTGGCAAATATTCTCCAAA 60.279 40.000 9.44 3.24 38.35 3.28
402 403 6.400568 CAAGTGTGGCAAATATTCTCCAAAT 58.599 36.000 9.44 0.00 0.00 2.32
403 404 6.212888 AGTGTGGCAAATATTCTCCAAATC 57.787 37.500 9.44 4.98 0.00 2.17
404 405 5.954150 AGTGTGGCAAATATTCTCCAAATCT 59.046 36.000 9.44 6.59 0.00 2.40
405 406 6.438425 AGTGTGGCAAATATTCTCCAAATCTT 59.562 34.615 9.44 0.00 0.00 2.40
406 407 7.038799 AGTGTGGCAAATATTCTCCAAATCTTT 60.039 33.333 9.44 0.00 0.00 2.52
407 408 7.276438 GTGTGGCAAATATTCTCCAAATCTTTC 59.724 37.037 9.44 0.00 0.00 2.62
408 409 7.039152 TGTGGCAAATATTCTCCAAATCTTTCA 60.039 33.333 9.44 1.53 0.00 2.69
409 410 7.818930 GTGGCAAATATTCTCCAAATCTTTCAA 59.181 33.333 9.44 0.00 0.00 2.69
410 411 7.818930 TGGCAAATATTCTCCAAATCTTTCAAC 59.181 33.333 6.25 0.00 0.00 3.18
411 412 7.278646 GGCAAATATTCTCCAAATCTTTCAACC 59.721 37.037 0.00 0.00 0.00 3.77
412 413 7.818930 GCAAATATTCTCCAAATCTTTCAACCA 59.181 33.333 0.00 0.00 0.00 3.67
413 414 9.362539 CAAATATTCTCCAAATCTTTCAACCAG 57.637 33.333 0.00 0.00 0.00 4.00
414 415 8.655935 AATATTCTCCAAATCTTTCAACCAGT 57.344 30.769 0.00 0.00 0.00 4.00
415 416 6.983906 ATTCTCCAAATCTTTCAACCAGTT 57.016 33.333 0.00 0.00 0.00 3.16
416 417 6.391227 TTCTCCAAATCTTTCAACCAGTTC 57.609 37.500 0.00 0.00 0.00 3.01
417 418 5.445069 TCTCCAAATCTTTCAACCAGTTCA 58.555 37.500 0.00 0.00 0.00 3.18
418 419 5.532406 TCTCCAAATCTTTCAACCAGTTCAG 59.468 40.000 0.00 0.00 0.00 3.02
419 420 5.445069 TCCAAATCTTTCAACCAGTTCAGA 58.555 37.500 0.00 0.00 0.00 3.27
420 421 5.890985 TCCAAATCTTTCAACCAGTTCAGAA 59.109 36.000 0.00 0.00 0.00 3.02
421 422 5.979517 CCAAATCTTTCAACCAGTTCAGAAC 59.020 40.000 5.00 5.00 0.00 3.01
422 423 5.774498 AATCTTTCAACCAGTTCAGAACC 57.226 39.130 9.85 0.00 0.00 3.62
423 424 4.229304 TCTTTCAACCAGTTCAGAACCA 57.771 40.909 9.85 0.00 0.00 3.67
424 425 4.792068 TCTTTCAACCAGTTCAGAACCAT 58.208 39.130 9.85 0.00 0.00 3.55
425 426 5.200483 TCTTTCAACCAGTTCAGAACCATT 58.800 37.500 9.85 0.00 0.00 3.16
426 427 4.916983 TTCAACCAGTTCAGAACCATTG 57.083 40.909 9.85 11.49 0.00 2.82
427 428 2.622942 TCAACCAGTTCAGAACCATTGC 59.377 45.455 9.85 0.00 0.00 3.56
428 429 2.624838 CAACCAGTTCAGAACCATTGCT 59.375 45.455 9.85 0.00 0.00 3.91
429 430 2.949447 ACCAGTTCAGAACCATTGCTT 58.051 42.857 9.85 0.00 0.00 3.91
430 431 3.299503 ACCAGTTCAGAACCATTGCTTT 58.700 40.909 9.85 0.00 0.00 3.51
431 432 3.068590 ACCAGTTCAGAACCATTGCTTTG 59.931 43.478 9.85 0.00 0.00 2.77
432 433 3.068590 CCAGTTCAGAACCATTGCTTTGT 59.931 43.478 9.85 0.00 0.00 2.83
433 434 4.293415 CAGTTCAGAACCATTGCTTTGTC 58.707 43.478 9.85 0.00 0.00 3.18
434 435 3.319122 AGTTCAGAACCATTGCTTTGTCC 59.681 43.478 9.85 0.00 0.00 4.02
435 436 2.942804 TCAGAACCATTGCTTTGTCCA 58.057 42.857 0.00 0.00 0.00 4.02
436 437 3.295093 TCAGAACCATTGCTTTGTCCAA 58.705 40.909 0.00 0.00 0.00 3.53
437 438 3.318839 TCAGAACCATTGCTTTGTCCAAG 59.681 43.478 0.00 0.00 35.29 3.61
438 439 2.629617 AGAACCATTGCTTTGTCCAAGG 59.370 45.455 0.00 0.00 32.37 3.61
439 440 2.380064 ACCATTGCTTTGTCCAAGGA 57.620 45.000 0.00 0.00 32.37 3.36
440 441 2.676748 ACCATTGCTTTGTCCAAGGAA 58.323 42.857 0.00 0.00 45.94 3.36
441 442 3.037549 ACCATTGCTTTGTCCAAGGAAA 58.962 40.909 0.00 0.00 45.12 3.13
442 443 3.454082 ACCATTGCTTTGTCCAAGGAAAA 59.546 39.130 0.00 0.00 45.12 2.29
443 444 4.080638 ACCATTGCTTTGTCCAAGGAAAAA 60.081 37.500 4.47 4.47 45.12 1.94
487 488 3.091633 AGGTTTTGGATCATGACCCAG 57.908 47.619 9.31 0.00 33.43 4.45
490 491 3.430453 GTTTTGGATCATGACCCAGGAA 58.570 45.455 9.31 5.91 33.43 3.36
494 495 2.918934 TGGATCATGACCCAGGAAGAAA 59.081 45.455 4.01 0.00 0.00 2.52
558 559 0.716108 GCGACTGTTCCAGATTCACG 59.284 55.000 0.00 0.00 35.18 4.35
723 734 5.529430 TGTTTAAAGGCGAAAGATTCTGACA 59.471 36.000 0.00 0.00 0.00 3.58
750 761 1.003580 CAGCCTTTGTAGGGAAGCTCA 59.996 52.381 0.00 0.00 42.25 4.26
971 987 2.738521 CGTCGGCTCTGTTGTGGG 60.739 66.667 0.00 0.00 0.00 4.61
994 1010 2.106683 GGCGGTTCATCGAAGGTGG 61.107 63.158 0.00 0.00 0.00 4.61
996 1012 0.108520 GCGGTTCATCGAAGGTGGTA 60.109 55.000 0.00 0.00 0.00 3.25
1065 1081 4.925861 GATGGCGGCAGGAGAGGC 62.926 72.222 19.29 0.00 0.00 4.70
1239 1255 2.049433 CTGTCGGTGTCGGTGTCC 60.049 66.667 0.00 0.00 36.95 4.02
1310 1335 2.279186 CGATGCCGCGGTGATACA 60.279 61.111 28.70 16.34 0.00 2.29
1311 1336 2.585869 CGATGCCGCGGTGATACAC 61.586 63.158 28.70 8.52 0.00 2.90
1323 1348 2.285069 ATACACCTGACGGCCCCA 60.285 61.111 0.00 0.00 0.00 4.96
1420 1451 1.746991 GGCTACCTGGTGAGCTTGC 60.747 63.158 20.18 11.04 38.79 4.01
1422 1453 1.986413 CTACCTGGTGAGCTTGCCT 59.014 57.895 10.23 0.00 0.00 4.75
1424 1455 0.036732 TACCTGGTGAGCTTGCCTTG 59.963 55.000 10.23 3.24 0.00 3.61
1425 1456 1.228367 CCTGGTGAGCTTGCCTTGT 60.228 57.895 8.64 0.00 0.00 3.16
1426 1457 0.825010 CCTGGTGAGCTTGCCTTGTT 60.825 55.000 8.64 0.00 0.00 2.83
1427 1458 0.313043 CTGGTGAGCTTGCCTTGTTG 59.687 55.000 8.64 0.00 0.00 3.33
1428 1459 0.106769 TGGTGAGCTTGCCTTGTTGA 60.107 50.000 8.64 0.00 0.00 3.18
1429 1460 0.312102 GGTGAGCTTGCCTTGTTGAC 59.688 55.000 0.00 0.00 0.00 3.18
1430 1461 0.040958 GTGAGCTTGCCTTGTTGACG 60.041 55.000 0.00 0.00 0.00 4.35
1431 1462 1.081840 GAGCTTGCCTTGTTGACGC 60.082 57.895 0.00 0.00 0.00 5.19
1432 1463 2.427410 GCTTGCCTTGTTGACGCG 60.427 61.111 3.53 3.53 0.00 6.01
1470 1505 6.065976 TGTGTTACTCCATCCATCTTCATT 57.934 37.500 0.00 0.00 0.00 2.57
1546 1594 3.230355 TGCACGTTAAATCAAATGTCGC 58.770 40.909 0.00 0.00 0.00 5.19
1791 1839 0.820226 CATGCTCGAGGAGGAAGACA 59.180 55.000 13.76 0.00 32.99 3.41
1793 1841 0.603569 TGCTCGAGGAGGAAGACAAC 59.396 55.000 15.58 0.00 0.00 3.32
1794 1842 0.456995 GCTCGAGGAGGAAGACAACG 60.457 60.000 15.58 0.00 0.00 4.10
1795 1843 0.456995 CTCGAGGAGGAAGACAACGC 60.457 60.000 3.91 0.00 0.00 4.84
1796 1844 1.446272 CGAGGAGGAAGACAACGCC 60.446 63.158 0.00 0.00 0.00 5.68
1797 1845 1.446272 GAGGAGGAAGACAACGCCG 60.446 63.158 0.00 0.00 0.00 6.46
1798 1846 3.119096 GGAGGAAGACAACGCCGC 61.119 66.667 0.00 0.00 0.00 6.53
1932 1986 3.524095 TGGTTGAATCAGGGAATGTGT 57.476 42.857 0.00 0.00 0.00 3.72
1934 1988 3.157087 GGTTGAATCAGGGAATGTGTGT 58.843 45.455 0.00 0.00 0.00 3.72
1935 1989 3.057315 GGTTGAATCAGGGAATGTGTGTG 60.057 47.826 0.00 0.00 0.00 3.82
1942 1996 1.526575 GGGAATGTGTGTGTGGCTGG 61.527 60.000 0.00 0.00 0.00 4.85
1993 2047 0.108186 AGCATGCCAAGATCGTCGAA 60.108 50.000 15.66 0.00 0.00 3.71
2064 2118 3.782042 GAGCGAACCATGGTCGAC 58.218 61.111 29.10 21.96 0.00 4.20
2625 2685 4.437794 CGACCATGATTGGATCACAACTTG 60.438 45.833 0.00 0.00 46.92 3.16
2632 2692 4.630894 TTGGATCACAACTTGACAACAC 57.369 40.909 0.00 0.00 36.92 3.32
2634 2694 4.013050 TGGATCACAACTTGACAACACAA 58.987 39.130 0.00 0.00 36.92 3.33
2656 2727 6.368516 ACAAACACATTTCTTGGTTTCTTGTG 59.631 34.615 0.00 0.00 39.03 3.33
2728 2803 1.233019 CTGTTTCAGGTGCACAGGAG 58.767 55.000 20.43 4.95 35.28 3.69
2741 2819 2.168521 GCACAGGAGCCAGTATTGAGTA 59.831 50.000 0.00 0.00 0.00 2.59
2775 2853 4.970860 AGCAAGATATAGCACTCCATGT 57.029 40.909 0.00 0.00 0.00 3.21
2811 2889 7.588512 ACTTCAGAACAACTCAAAGATAATGC 58.411 34.615 0.00 0.00 0.00 3.56
2889 2967 3.044059 GCGCTCCATGCCTTGTGAC 62.044 63.158 0.00 0.00 38.78 3.67
2892 2970 1.028868 GCTCCATGCCTTGTGACTCC 61.029 60.000 0.00 0.00 35.15 3.85
2893 2971 0.393537 CTCCATGCCTTGTGACTCCC 60.394 60.000 0.00 0.00 0.00 4.30
2909 2993 2.151202 CTCCCTTGCTGCGTTTTTAGA 58.849 47.619 0.00 0.00 0.00 2.10
2914 2998 3.182372 CCTTGCTGCGTTTTTAGAAAAGC 59.818 43.478 9.26 9.26 46.22 3.51
2944 3028 1.816074 TAACTCCGGTGTCAAATGCC 58.184 50.000 10.05 0.00 0.00 4.40
2947 3031 1.303236 TCCGGTGTCAAATGCCCAG 60.303 57.895 0.00 0.00 0.00 4.45
2949 3033 0.893270 CCGGTGTCAAATGCCCAGAA 60.893 55.000 0.00 0.00 0.00 3.02
2959 3043 6.183360 TGTCAAATGCCCAGAATAATTCGTAC 60.183 38.462 0.00 0.00 34.02 3.67
2981 3065 2.415512 GACACCGGAGTTGTATGCTTTC 59.584 50.000 9.46 0.00 0.00 2.62
2985 3069 3.195661 CCGGAGTTGTATGCTTTCTACC 58.804 50.000 0.00 0.00 0.00 3.18
2990 3074 5.337652 GGAGTTGTATGCTTTCTACCAGACT 60.338 44.000 0.00 0.00 0.00 3.24
2991 3075 6.127423 GGAGTTGTATGCTTTCTACCAGACTA 60.127 42.308 0.00 0.00 0.00 2.59
2992 3076 7.418025 GGAGTTGTATGCTTTCTACCAGACTAT 60.418 40.741 0.00 0.00 0.00 2.12
3049 3133 2.531522 AAAGAAACCATTGCACTGCC 57.468 45.000 0.00 0.00 0.00 4.85
3050 3134 0.681175 AAGAAACCATTGCACTGCCC 59.319 50.000 0.00 0.00 0.00 5.36
3051 3135 0.178953 AGAAACCATTGCACTGCCCT 60.179 50.000 0.00 0.00 0.00 5.19
3052 3136 1.075374 AGAAACCATTGCACTGCCCTA 59.925 47.619 0.00 0.00 0.00 3.53
3053 3137 1.474077 GAAACCATTGCACTGCCCTAG 59.526 52.381 0.00 0.00 0.00 3.02
3054 3138 0.323725 AACCATTGCACTGCCCTAGG 60.324 55.000 0.06 0.06 0.00 3.02
3068 3152 3.421844 GCCCTAGGCCAAATAAGTATGG 58.578 50.000 5.01 0.00 44.06 2.74
3069 3153 3.181433 GCCCTAGGCCAAATAAGTATGGT 60.181 47.826 5.01 0.00 44.06 3.55
3070 3154 4.652822 CCCTAGGCCAAATAAGTATGGTC 58.347 47.826 5.01 0.00 41.72 4.02
3077 3161 7.399245 GGCCAAATAAGTATGGTCTAAAACA 57.601 36.000 0.00 0.00 38.31 2.83
3078 3162 7.255569 GGCCAAATAAGTATGGTCTAAAACAC 58.744 38.462 0.00 0.00 38.31 3.32
3079 3163 7.094118 GGCCAAATAAGTATGGTCTAAAACACA 60.094 37.037 0.00 0.00 38.31 3.72
3080 3164 8.466798 GCCAAATAAGTATGGTCTAAAACACAT 58.533 33.333 0.00 0.00 39.00 3.21
3099 3183 7.722795 ACACATTGTTTATTTTTAACCCAGC 57.277 32.000 0.00 0.00 0.00 4.85
3100 3184 6.422400 ACACATTGTTTATTTTTAACCCAGCG 59.578 34.615 0.00 0.00 0.00 5.18
3101 3185 6.422400 CACATTGTTTATTTTTAACCCAGCGT 59.578 34.615 0.00 0.00 0.00 5.07
3102 3186 6.643360 ACATTGTTTATTTTTAACCCAGCGTC 59.357 34.615 0.00 0.00 0.00 5.19
3103 3187 5.769484 TGTTTATTTTTAACCCAGCGTCA 57.231 34.783 0.00 0.00 0.00 4.35
3104 3188 6.145338 TGTTTATTTTTAACCCAGCGTCAA 57.855 33.333 0.00 0.00 0.00 3.18
3105 3189 6.750148 TGTTTATTTTTAACCCAGCGTCAAT 58.250 32.000 0.00 0.00 0.00 2.57
3106 3190 7.210873 TGTTTATTTTTAACCCAGCGTCAATT 58.789 30.769 0.00 0.00 0.00 2.32
3107 3191 8.358148 TGTTTATTTTTAACCCAGCGTCAATTA 58.642 29.630 0.00 0.00 0.00 1.40
3108 3192 9.361315 GTTTATTTTTAACCCAGCGTCAATTAT 57.639 29.630 0.00 0.00 0.00 1.28
3109 3193 9.930693 TTTATTTTTAACCCAGCGTCAATTATT 57.069 25.926 0.00 0.00 0.00 1.40
3110 3194 9.575783 TTATTTTTAACCCAGCGTCAATTATTC 57.424 29.630 0.00 0.00 0.00 1.75
3111 3195 6.827586 TTTTAACCCAGCGTCAATTATTCT 57.172 33.333 0.00 0.00 0.00 2.40
3112 3196 6.431198 TTTAACCCAGCGTCAATTATTCTC 57.569 37.500 0.00 0.00 0.00 2.87
3113 3197 3.627395 ACCCAGCGTCAATTATTCTCA 57.373 42.857 0.00 0.00 0.00 3.27
3114 3198 3.950397 ACCCAGCGTCAATTATTCTCAA 58.050 40.909 0.00 0.00 0.00 3.02
3115 3199 3.689649 ACCCAGCGTCAATTATTCTCAAC 59.310 43.478 0.00 0.00 0.00 3.18
3116 3200 3.689161 CCCAGCGTCAATTATTCTCAACA 59.311 43.478 0.00 0.00 0.00 3.33
3117 3201 4.336433 CCCAGCGTCAATTATTCTCAACAT 59.664 41.667 0.00 0.00 0.00 2.71
3118 3202 5.504665 CCCAGCGTCAATTATTCTCAACATC 60.505 44.000 0.00 0.00 0.00 3.06
3119 3203 5.065090 CCAGCGTCAATTATTCTCAACATCA 59.935 40.000 0.00 0.00 0.00 3.07
3120 3204 6.403527 CCAGCGTCAATTATTCTCAACATCAA 60.404 38.462 0.00 0.00 0.00 2.57
3121 3205 7.022979 CAGCGTCAATTATTCTCAACATCAAA 58.977 34.615 0.00 0.00 0.00 2.69
3122 3206 7.007725 CAGCGTCAATTATTCTCAACATCAAAC 59.992 37.037 0.00 0.00 0.00 2.93
3123 3207 7.023575 GCGTCAATTATTCTCAACATCAAACT 58.976 34.615 0.00 0.00 0.00 2.66
3124 3208 7.538678 GCGTCAATTATTCTCAACATCAAACTT 59.461 33.333 0.00 0.00 0.00 2.66
3125 3209 9.055248 CGTCAATTATTCTCAACATCAAACTTC 57.945 33.333 0.00 0.00 0.00 3.01
3126 3210 9.897744 GTCAATTATTCTCAACATCAAACTTCA 57.102 29.630 0.00 0.00 0.00 3.02
3127 3211 9.897744 TCAATTATTCTCAACATCAAACTTCAC 57.102 29.630 0.00 0.00 0.00 3.18
3128 3212 9.132521 CAATTATTCTCAACATCAAACTTCACC 57.867 33.333 0.00 0.00 0.00 4.02
3129 3213 8.641498 ATTATTCTCAACATCAAACTTCACCT 57.359 30.769 0.00 0.00 0.00 4.00
3130 3214 9.739276 ATTATTCTCAACATCAAACTTCACCTA 57.261 29.630 0.00 0.00 0.00 3.08
3131 3215 6.861065 TTCTCAACATCAAACTTCACCTAC 57.139 37.500 0.00 0.00 0.00 3.18
3132 3216 4.988540 TCTCAACATCAAACTTCACCTACG 59.011 41.667 0.00 0.00 0.00 3.51
3133 3217 4.951254 TCAACATCAAACTTCACCTACGA 58.049 39.130 0.00 0.00 0.00 3.43
3134 3218 4.988540 TCAACATCAAACTTCACCTACGAG 59.011 41.667 0.00 0.00 0.00 4.18
3135 3219 3.326747 ACATCAAACTTCACCTACGAGC 58.673 45.455 0.00 0.00 0.00 5.03
3136 3220 2.450609 TCAAACTTCACCTACGAGCC 57.549 50.000 0.00 0.00 0.00 4.70
3137 3221 1.001633 TCAAACTTCACCTACGAGCCC 59.998 52.381 0.00 0.00 0.00 5.19
3138 3222 0.037605 AAACTTCACCTACGAGCCCG 60.038 55.000 0.00 0.00 42.50 6.13
3148 3232 4.033894 CGAGCCCGTGGATTCATC 57.966 61.111 0.00 0.00 0.00 2.92
3150 3234 1.227973 GAGCCCGTGGATTCATCCC 60.228 63.158 3.26 0.00 46.59 3.85
3151 3235 2.203351 GCCCGTGGATTCATCCCC 60.203 66.667 3.26 0.00 46.59 4.81
3152 3236 2.757124 GCCCGTGGATTCATCCCCT 61.757 63.158 3.26 0.00 46.59 4.79
3153 3237 1.922821 CCCGTGGATTCATCCCCTT 59.077 57.895 3.26 0.00 46.59 3.95
3154 3238 0.258774 CCCGTGGATTCATCCCCTTT 59.741 55.000 3.26 0.00 46.59 3.11
3155 3239 1.392589 CCGTGGATTCATCCCCTTTG 58.607 55.000 3.26 0.00 46.59 2.77
3156 3240 0.740737 CGTGGATTCATCCCCTTTGC 59.259 55.000 3.26 0.00 46.59 3.68
3157 3241 1.114627 GTGGATTCATCCCCTTTGCC 58.885 55.000 3.26 0.00 46.59 4.52
3158 3242 1.009997 TGGATTCATCCCCTTTGCCT 58.990 50.000 3.26 0.00 46.59 4.75
3159 3243 1.342275 TGGATTCATCCCCTTTGCCTG 60.342 52.381 3.26 0.00 46.59 4.85
3160 3244 0.749049 GATTCATCCCCTTTGCCTGC 59.251 55.000 0.00 0.00 0.00 4.85
3161 3245 0.688749 ATTCATCCCCTTTGCCTGCC 60.689 55.000 0.00 0.00 0.00 4.85
3162 3246 3.142838 CATCCCCTTTGCCTGCCG 61.143 66.667 0.00 0.00 0.00 5.69
3183 3267 5.235516 CCGCTCCGGTTAATAGTTTATCAT 58.764 41.667 0.00 0.00 42.73 2.45
3221 3305 9.032420 GGCTTATACACAGAAACTTATCAGTAC 57.968 37.037 0.00 0.00 30.68 2.73
3244 3328 1.532007 CTGGTTAAAACACGGCGCTAA 59.468 47.619 6.90 0.00 0.00 3.09
3257 3341 3.057019 CGGCGCTAATGCTATCTAACAA 58.943 45.455 7.64 0.00 36.97 2.83
3449 3560 2.540769 GCGACAGTGCTGCAACTAAAAA 60.541 45.455 2.77 0.00 0.00 1.94
3605 3867 4.842380 ACTACTAAGTTTGACTTGCCCCTA 59.158 41.667 3.70 0.00 39.11 3.53
3620 3882 1.805254 CCTACACGGGTGTACCTCG 59.195 63.158 0.00 5.80 44.42 4.63
3671 3934 3.597728 CTACCTCTCCCTCGCCGC 61.598 72.222 0.00 0.00 0.00 6.53
3672 3935 4.124943 TACCTCTCCCTCGCCGCT 62.125 66.667 0.00 0.00 0.00 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.415501 GCGCTGACGTTGTCGCAG 62.416 66.667 19.29 9.90 45.99 5.18
9 10 2.102357 ATGTAGACGGCGCTGACG 59.898 61.111 25.98 13.69 41.40 4.35
10 11 1.140407 GACATGTAGACGGCGCTGAC 61.140 60.000 25.98 18.09 0.00 3.51
11 12 1.138883 GACATGTAGACGGCGCTGA 59.861 57.895 25.98 0.00 0.00 4.26
12 13 1.878522 GGACATGTAGACGGCGCTG 60.879 63.158 16.39 16.39 0.00 5.18
13 14 2.348104 TGGACATGTAGACGGCGCT 61.348 57.895 6.90 8.04 0.00 5.92
14 15 2.165301 GTGGACATGTAGACGGCGC 61.165 63.158 6.90 0.00 0.00 6.53
15 16 1.518572 GGTGGACATGTAGACGGCG 60.519 63.158 4.80 4.80 0.00 6.46
16 17 0.036765 TTGGTGGACATGTAGACGGC 60.037 55.000 0.00 0.00 0.00 5.68
17 18 1.674817 GGTTGGTGGACATGTAGACGG 60.675 57.143 0.00 0.00 0.00 4.79
18 19 1.674817 GGGTTGGTGGACATGTAGACG 60.675 57.143 0.00 0.00 0.00 4.18
19 20 1.339727 GGGGTTGGTGGACATGTAGAC 60.340 57.143 0.00 0.00 0.00 2.59
20 21 0.988832 GGGGTTGGTGGACATGTAGA 59.011 55.000 0.00 0.00 0.00 2.59
21 22 0.392461 CGGGGTTGGTGGACATGTAG 60.392 60.000 0.00 0.00 0.00 2.74
22 23 1.128809 ACGGGGTTGGTGGACATGTA 61.129 55.000 0.00 0.00 0.00 2.29
23 24 2.002018 AACGGGGTTGGTGGACATGT 62.002 55.000 0.00 0.00 0.00 3.21
24 25 1.228429 AACGGGGTTGGTGGACATG 60.228 57.895 0.00 0.00 0.00 3.21
25 26 1.074248 GAACGGGGTTGGTGGACAT 59.926 57.895 0.00 0.00 0.00 3.06
26 27 2.332312 CTGAACGGGGTTGGTGGACA 62.332 60.000 0.00 0.00 0.00 4.02
27 28 1.599797 CTGAACGGGGTTGGTGGAC 60.600 63.158 0.00 0.00 0.00 4.02
28 29 2.833227 CTGAACGGGGTTGGTGGA 59.167 61.111 0.00 0.00 0.00 4.02
29 30 2.983592 GCTGAACGGGGTTGGTGG 60.984 66.667 0.00 0.00 0.00 4.61
30 31 1.586154 GATGCTGAACGGGGTTGGTG 61.586 60.000 0.00 0.00 0.00 4.17
31 32 1.303317 GATGCTGAACGGGGTTGGT 60.303 57.895 0.00 0.00 0.00 3.67
32 33 1.303236 TGATGCTGAACGGGGTTGG 60.303 57.895 0.00 0.00 0.00 3.77
33 34 1.926511 GCTGATGCTGAACGGGGTTG 61.927 60.000 0.00 0.00 36.03 3.77
34 35 1.675641 GCTGATGCTGAACGGGGTT 60.676 57.895 0.00 0.00 36.03 4.11
35 36 2.045926 GCTGATGCTGAACGGGGT 60.046 61.111 0.00 0.00 36.03 4.95
36 37 2.572095 TACGCTGATGCTGAACGGGG 62.572 60.000 0.00 0.00 36.97 5.73
37 38 1.153647 TACGCTGATGCTGAACGGG 60.154 57.895 0.00 0.00 36.97 5.28
38 39 1.421410 GGTACGCTGATGCTGAACGG 61.421 60.000 0.00 0.00 36.97 4.44
39 40 0.735978 TGGTACGCTGATGCTGAACG 60.736 55.000 0.00 0.00 36.97 3.95
40 41 1.438651 TTGGTACGCTGATGCTGAAC 58.561 50.000 0.00 0.00 36.97 3.18
41 42 1.804151 GTTTGGTACGCTGATGCTGAA 59.196 47.619 0.00 0.00 36.97 3.02
42 43 1.270571 TGTTTGGTACGCTGATGCTGA 60.271 47.619 0.00 0.00 36.97 4.26
43 44 1.135972 GTGTTTGGTACGCTGATGCTG 60.136 52.381 0.00 0.00 36.97 4.41
44 45 1.156736 GTGTTTGGTACGCTGATGCT 58.843 50.000 0.00 0.00 36.97 3.79
45 46 0.871722 TGTGTTTGGTACGCTGATGC 59.128 50.000 0.00 0.00 38.12 3.91
46 47 2.222796 CGATGTGTTTGGTACGCTGATG 60.223 50.000 0.00 0.00 38.12 3.07
47 48 1.999735 CGATGTGTTTGGTACGCTGAT 59.000 47.619 0.00 0.00 38.12 2.90
48 49 1.000052 TCGATGTGTTTGGTACGCTGA 60.000 47.619 0.00 0.00 38.12 4.26
49 50 1.424403 TCGATGTGTTTGGTACGCTG 58.576 50.000 0.00 0.00 38.12 5.18
50 51 2.157834 TTCGATGTGTTTGGTACGCT 57.842 45.000 0.00 0.00 38.12 5.07
51 52 2.953640 TTTCGATGTGTTTGGTACGC 57.046 45.000 0.00 0.00 37.77 4.42
52 53 3.365520 TCGATTTCGATGTGTTTGGTACG 59.634 43.478 0.00 0.00 44.22 3.67
53 54 4.914312 TCGATTTCGATGTGTTTGGTAC 57.086 40.909 0.00 0.00 44.22 3.34
66 67 2.798680 ACGAAGTGGAGATCGATTTCG 58.201 47.619 20.34 20.34 44.60 3.46
67 68 3.240861 CGAACGAAGTGGAGATCGATTTC 59.759 47.826 7.40 7.40 45.00 2.17
68 69 3.179830 CGAACGAAGTGGAGATCGATTT 58.820 45.455 0.00 0.00 45.00 2.17
69 70 2.798680 CGAACGAAGTGGAGATCGATT 58.201 47.619 0.00 0.00 45.00 3.34
70 71 1.534175 GCGAACGAAGTGGAGATCGAT 60.534 52.381 0.00 0.00 45.00 3.59
71 72 0.179171 GCGAACGAAGTGGAGATCGA 60.179 55.000 1.84 0.00 45.00 3.59
72 73 1.464429 CGCGAACGAAGTGGAGATCG 61.464 60.000 0.00 0.00 45.00 3.69
73 74 2.279469 CGCGAACGAAGTGGAGATC 58.721 57.895 0.00 0.00 45.00 2.75
74 75 4.478195 CGCGAACGAAGTGGAGAT 57.522 55.556 0.00 0.00 45.00 2.75
84 85 2.275202 GCAACACGATCGCGAACG 60.275 61.111 32.81 32.81 41.64 3.95
85 86 2.095843 GGCAACACGATCGCGAAC 59.904 61.111 15.24 10.31 41.64 3.95
86 87 2.356433 TGGCAACACGATCGCGAA 60.356 55.556 15.24 0.00 46.17 4.70
97 98 1.678970 GGACCTGACCCATGGCAAC 60.679 63.158 6.09 0.00 0.00 4.17
98 99 2.763215 GGACCTGACCCATGGCAA 59.237 61.111 6.09 0.00 0.00 4.52
99 100 3.716195 CGGACCTGACCCATGGCA 61.716 66.667 6.09 0.00 0.00 4.92
100 101 3.717294 ACGGACCTGACCCATGGC 61.717 66.667 6.09 0.00 0.00 4.40
101 102 2.268920 CACGGACCTGACCCATGG 59.731 66.667 4.14 4.14 0.00 3.66
102 103 1.375908 CACACGGACCTGACCCATG 60.376 63.158 0.00 0.00 0.00 3.66
103 104 3.068881 CACACGGACCTGACCCAT 58.931 61.111 0.00 0.00 0.00 4.00
104 105 3.936203 GCACACGGACCTGACCCA 61.936 66.667 0.00 0.00 0.00 4.51
105 106 3.626924 AGCACACGGACCTGACCC 61.627 66.667 0.00 0.00 0.00 4.46
106 107 2.357517 CAGCACACGGACCTGACC 60.358 66.667 0.00 0.00 0.00 4.02
107 108 3.044305 GCAGCACACGGACCTGAC 61.044 66.667 0.00 0.00 0.00 3.51
108 109 2.882677 ATGCAGCACACGGACCTGA 61.883 57.895 0.00 0.00 0.00 3.86
109 110 2.359107 ATGCAGCACACGGACCTG 60.359 61.111 0.00 0.00 0.00 4.00
110 111 2.359107 CATGCAGCACACGGACCT 60.359 61.111 0.00 0.00 0.00 3.85
111 112 2.187599 GAACATGCAGCACACGGACC 62.188 60.000 0.00 0.00 0.00 4.46
112 113 1.207593 GAACATGCAGCACACGGAC 59.792 57.895 0.00 0.00 0.00 4.79
113 114 1.965930 GGAACATGCAGCACACGGA 60.966 57.895 0.00 0.00 0.00 4.69
114 115 2.562912 GGAACATGCAGCACACGG 59.437 61.111 0.00 0.00 0.00 4.94
115 116 1.915614 GAGGGAACATGCAGCACACG 61.916 60.000 0.00 0.00 0.00 4.49
116 117 1.878775 GAGGGAACATGCAGCACAC 59.121 57.895 0.00 0.00 0.00 3.82
117 118 1.672030 CGAGGGAACATGCAGCACA 60.672 57.895 0.00 0.00 0.00 4.57
118 119 1.639298 GACGAGGGAACATGCAGCAC 61.639 60.000 0.00 0.00 0.00 4.40
119 120 1.375908 GACGAGGGAACATGCAGCA 60.376 57.895 0.00 0.00 0.00 4.41
120 121 1.375908 TGACGAGGGAACATGCAGC 60.376 57.895 0.00 0.00 0.00 5.25
121 122 1.354337 CGTGACGAGGGAACATGCAG 61.354 60.000 0.00 0.00 0.00 4.41
122 123 1.374125 CGTGACGAGGGAACATGCA 60.374 57.895 0.00 0.00 0.00 3.96
123 124 2.740714 GCGTGACGAGGGAACATGC 61.741 63.158 10.10 0.00 38.90 4.06
124 125 2.100631 GGCGTGACGAGGGAACATG 61.101 63.158 10.10 0.00 0.00 3.21
125 126 2.264794 GGCGTGACGAGGGAACAT 59.735 61.111 10.10 0.00 0.00 2.71
126 127 3.220999 CTGGCGTGACGAGGGAACA 62.221 63.158 10.10 0.00 0.00 3.18
127 128 2.432628 CTGGCGTGACGAGGGAAC 60.433 66.667 10.10 0.00 0.00 3.62
128 129 2.035237 AAACTGGCGTGACGAGGGAA 62.035 55.000 10.10 0.00 0.00 3.97
129 130 2.504274 AAACTGGCGTGACGAGGGA 61.504 57.895 10.10 0.00 0.00 4.20
130 131 2.030562 AAACTGGCGTGACGAGGG 59.969 61.111 10.10 0.00 0.00 4.30
131 132 2.954753 GCAAACTGGCGTGACGAGG 61.955 63.158 10.10 0.00 0.00 4.63
132 133 2.551270 GCAAACTGGCGTGACGAG 59.449 61.111 10.10 0.00 0.00 4.18
133 134 2.970324 GGCAAACTGGCGTGACGA 60.970 61.111 10.10 0.00 31.79 4.20
140 141 0.109597 CAAGATGTCGGCAAACTGGC 60.110 55.000 0.00 0.00 39.85 4.85
141 142 1.197721 GTCAAGATGTCGGCAAACTGG 59.802 52.381 0.00 0.00 0.00 4.00
142 143 1.136252 CGTCAAGATGTCGGCAAACTG 60.136 52.381 0.00 0.00 0.00 3.16
143 144 1.148310 CGTCAAGATGTCGGCAAACT 58.852 50.000 0.00 0.00 0.00 2.66
144 145 1.144969 TCGTCAAGATGTCGGCAAAC 58.855 50.000 0.00 0.00 30.30 2.93
145 146 1.798223 CTTCGTCAAGATGTCGGCAAA 59.202 47.619 0.00 0.00 30.30 3.68
146 147 1.428448 CTTCGTCAAGATGTCGGCAA 58.572 50.000 0.00 0.00 30.30 4.52
147 148 0.389817 CCTTCGTCAAGATGTCGGCA 60.390 55.000 0.00 0.00 30.30 5.69
148 149 1.084370 CCCTTCGTCAAGATGTCGGC 61.084 60.000 0.00 0.00 30.30 5.54
149 150 1.084370 GCCCTTCGTCAAGATGTCGG 61.084 60.000 0.00 0.00 30.30 4.79
150 151 1.084370 GGCCCTTCGTCAAGATGTCG 61.084 60.000 0.00 0.00 0.00 4.35
151 152 0.250513 AGGCCCTTCGTCAAGATGTC 59.749 55.000 0.00 0.00 0.00 3.06
152 153 0.250513 GAGGCCCTTCGTCAAGATGT 59.749 55.000 0.00 0.00 0.00 3.06
153 154 0.462759 GGAGGCCCTTCGTCAAGATG 60.463 60.000 0.00 0.00 0.00 2.90
154 155 1.627297 GGGAGGCCCTTCGTCAAGAT 61.627 60.000 0.00 0.00 41.34 2.40
155 156 2.291043 GGGAGGCCCTTCGTCAAGA 61.291 63.158 0.00 0.00 41.34 3.02
156 157 2.269241 GGGAGGCCCTTCGTCAAG 59.731 66.667 0.00 0.00 41.34 3.02
157 158 3.702048 CGGGAGGCCCTTCGTCAA 61.702 66.667 0.00 0.00 42.67 3.18
159 160 4.144703 GACGGGAGGCCCTTCGTC 62.145 72.222 20.95 20.95 42.67 4.20
174 175 0.872388 AATCCAGAAACAACGGCGAC 59.128 50.000 16.62 0.00 0.00 5.19
175 176 1.600023 AAATCCAGAAACAACGGCGA 58.400 45.000 16.62 0.00 0.00 5.54
176 177 2.315901 GAAAATCCAGAAACAACGGCG 58.684 47.619 4.80 4.80 0.00 6.46
177 178 2.315901 CGAAAATCCAGAAACAACGGC 58.684 47.619 0.00 0.00 0.00 5.68
178 179 2.292292 ACCGAAAATCCAGAAACAACGG 59.708 45.455 0.00 0.00 42.78 4.44
179 180 3.551551 GACCGAAAATCCAGAAACAACG 58.448 45.455 0.00 0.00 0.00 4.10
180 181 3.316868 TGGACCGAAAATCCAGAAACAAC 59.683 43.478 0.00 0.00 41.47 3.32
181 182 3.556999 TGGACCGAAAATCCAGAAACAA 58.443 40.909 0.00 0.00 41.47 2.83
182 183 3.216187 TGGACCGAAAATCCAGAAACA 57.784 42.857 0.00 0.00 41.47 2.83
188 189 1.974957 TGAGACTGGACCGAAAATCCA 59.025 47.619 0.00 0.00 44.20 3.41
189 190 2.742589 GTTGAGACTGGACCGAAAATCC 59.257 50.000 0.00 0.00 36.70 3.01
190 191 2.412089 CGTTGAGACTGGACCGAAAATC 59.588 50.000 0.00 0.00 0.00 2.17
191 192 2.224209 ACGTTGAGACTGGACCGAAAAT 60.224 45.455 0.00 0.00 0.00 1.82
192 193 1.137479 ACGTTGAGACTGGACCGAAAA 59.863 47.619 0.00 0.00 0.00 2.29
193 194 0.748450 ACGTTGAGACTGGACCGAAA 59.252 50.000 0.00 0.00 0.00 3.46
194 195 0.313043 GACGTTGAGACTGGACCGAA 59.687 55.000 0.00 0.00 0.00 4.30
195 196 1.521450 GGACGTTGAGACTGGACCGA 61.521 60.000 0.00 0.00 0.00 4.69
196 197 1.080705 GGACGTTGAGACTGGACCG 60.081 63.158 0.00 0.00 0.00 4.79
197 198 1.080705 CGGACGTTGAGACTGGACC 60.081 63.158 0.00 0.00 0.00 4.46
198 199 1.733399 GCGGACGTTGAGACTGGAC 60.733 63.158 0.00 0.00 0.00 4.02
199 200 1.863662 GAGCGGACGTTGAGACTGGA 61.864 60.000 0.00 0.00 0.00 3.86
200 201 1.444553 GAGCGGACGTTGAGACTGG 60.445 63.158 0.00 0.00 0.00 4.00
201 202 0.455295 GAGAGCGGACGTTGAGACTG 60.455 60.000 0.00 0.00 0.00 3.51
202 203 1.587933 GGAGAGCGGACGTTGAGACT 61.588 60.000 0.00 0.00 0.00 3.24
203 204 1.153997 GGAGAGCGGACGTTGAGAC 60.154 63.158 0.00 0.00 0.00 3.36
204 205 1.303398 AGGAGAGCGGACGTTGAGA 60.303 57.895 0.00 0.00 0.00 3.27
205 206 1.137825 GAGGAGAGCGGACGTTGAG 59.862 63.158 0.00 0.00 0.00 3.02
206 207 2.341101 GGAGGAGAGCGGACGTTGA 61.341 63.158 0.00 0.00 0.00 3.18
207 208 2.182030 GGAGGAGAGCGGACGTTG 59.818 66.667 0.00 0.00 0.00 4.10
208 209 3.069318 GGGAGGAGAGCGGACGTT 61.069 66.667 0.00 0.00 0.00 3.99
211 212 3.069318 AACGGGAGGAGAGCGGAC 61.069 66.667 0.00 0.00 0.00 4.79
212 213 3.068691 CAACGGGAGGAGAGCGGA 61.069 66.667 0.00 0.00 0.00 5.54
213 214 3.382832 ACAACGGGAGGAGAGCGG 61.383 66.667 0.00 0.00 0.00 5.52
214 215 2.125912 CACAACGGGAGGAGAGCG 60.126 66.667 0.00 0.00 0.00 5.03
215 216 1.079750 GTCACAACGGGAGGAGAGC 60.080 63.158 0.00 0.00 0.00 4.09
216 217 0.244994 CAGTCACAACGGGAGGAGAG 59.755 60.000 0.00 0.00 0.00 3.20
217 218 1.816863 GCAGTCACAACGGGAGGAGA 61.817 60.000 0.00 0.00 0.00 3.71
218 219 1.374758 GCAGTCACAACGGGAGGAG 60.375 63.158 0.00 0.00 0.00 3.69
219 220 2.741092 GCAGTCACAACGGGAGGA 59.259 61.111 0.00 0.00 0.00 3.71
220 221 2.738521 CGCAGTCACAACGGGAGG 60.739 66.667 0.00 0.00 0.00 4.30
221 222 2.738521 CCGCAGTCACAACGGGAG 60.739 66.667 0.60 0.00 43.23 4.30
225 226 4.308458 TCCCCCGCAGTCACAACG 62.308 66.667 0.00 0.00 0.00 4.10
226 227 2.358737 CTCCCCCGCAGTCACAAC 60.359 66.667 0.00 0.00 0.00 3.32
227 228 2.847234 ACTCCCCCGCAGTCACAA 60.847 61.111 0.00 0.00 0.00 3.33
228 229 3.625897 CACTCCCCCGCAGTCACA 61.626 66.667 0.00 0.00 0.00 3.58
229 230 1.823169 TAACACTCCCCCGCAGTCAC 61.823 60.000 0.00 0.00 0.00 3.67
230 231 1.534476 TAACACTCCCCCGCAGTCA 60.534 57.895 0.00 0.00 0.00 3.41
231 232 1.218316 CTAACACTCCCCCGCAGTC 59.782 63.158 0.00 0.00 0.00 3.51
232 233 1.229082 TCTAACACTCCCCCGCAGT 60.229 57.895 0.00 0.00 0.00 4.40
233 234 1.218316 GTCTAACACTCCCCCGCAG 59.782 63.158 0.00 0.00 0.00 5.18
234 235 0.040058 TAGTCTAACACTCCCCCGCA 59.960 55.000 0.00 0.00 36.43 5.69
235 236 1.188863 TTAGTCTAACACTCCCCCGC 58.811 55.000 0.00 0.00 36.43 6.13
236 237 4.587684 ACATATTAGTCTAACACTCCCCCG 59.412 45.833 0.00 0.00 36.43 5.73
237 238 5.601313 TGACATATTAGTCTAACACTCCCCC 59.399 44.000 0.00 0.00 39.27 5.40
238 239 6.514063 GTGACATATTAGTCTAACACTCCCC 58.486 44.000 0.00 0.00 39.27 4.81
239 240 6.183360 ACGTGACATATTAGTCTAACACTCCC 60.183 42.308 0.00 0.00 39.27 4.30
240 241 6.793349 ACGTGACATATTAGTCTAACACTCC 58.207 40.000 0.00 0.00 39.27 3.85
241 242 9.596677 GATACGTGACATATTAGTCTAACACTC 57.403 37.037 0.00 0.00 39.27 3.51
242 243 8.281194 CGATACGTGACATATTAGTCTAACACT 58.719 37.037 0.00 0.00 39.27 3.55
243 244 8.066595 ACGATACGTGACATATTAGTCTAACAC 58.933 37.037 0.00 0.00 39.18 3.32
244 245 8.146479 ACGATACGTGACATATTAGTCTAACA 57.854 34.615 0.00 0.00 39.18 2.41
261 262 6.093771 GGATTAGGAGATATGTCACGATACGT 59.906 42.308 1.87 0.00 42.36 3.57
262 263 6.458478 GGGATTAGGAGATATGTCACGATACG 60.458 46.154 1.87 0.00 0.00 3.06
263 264 6.183360 GGGGATTAGGAGATATGTCACGATAC 60.183 46.154 1.87 0.00 0.00 2.24
264 265 5.892119 GGGGATTAGGAGATATGTCACGATA 59.108 44.000 1.87 0.00 0.00 2.92
265 266 4.712337 GGGGATTAGGAGATATGTCACGAT 59.288 45.833 1.87 0.00 0.00 3.73
266 267 4.087182 GGGGATTAGGAGATATGTCACGA 58.913 47.826 1.87 0.00 0.00 4.35
267 268 4.090090 AGGGGATTAGGAGATATGTCACG 58.910 47.826 1.87 0.00 0.00 4.35
268 269 7.554959 TTTAGGGGATTAGGAGATATGTCAC 57.445 40.000 1.87 0.00 0.00 3.67
269 270 7.124298 CGATTTAGGGGATTAGGAGATATGTCA 59.876 40.741 1.87 0.00 0.00 3.58
270 271 7.342284 TCGATTTAGGGGATTAGGAGATATGTC 59.658 40.741 0.00 0.00 0.00 3.06
271 272 7.189794 TCGATTTAGGGGATTAGGAGATATGT 58.810 38.462 0.00 0.00 0.00 2.29
272 273 7.201956 CCTCGATTTAGGGGATTAGGAGATATG 60.202 44.444 0.00 0.00 32.01 1.78
273 274 6.841755 CCTCGATTTAGGGGATTAGGAGATAT 59.158 42.308 0.00 0.00 32.01 1.63
274 275 6.011007 TCCTCGATTTAGGGGATTAGGAGATA 60.011 42.308 0.00 0.00 35.46 1.98
275 276 5.026790 CCTCGATTTAGGGGATTAGGAGAT 58.973 45.833 0.00 0.00 32.01 2.75
276 277 4.107473 TCCTCGATTTAGGGGATTAGGAGA 59.893 45.833 0.00 0.00 35.46 3.71
277 278 4.417437 TCCTCGATTTAGGGGATTAGGAG 58.583 47.826 0.00 0.00 35.46 3.69
278 279 4.140758 ACTCCTCGATTTAGGGGATTAGGA 60.141 45.833 0.00 0.00 39.81 2.94
279 280 4.161102 ACTCCTCGATTTAGGGGATTAGG 58.839 47.826 0.00 0.00 39.81 2.69
280 281 6.183360 CGATACTCCTCGATTTAGGGGATTAG 60.183 46.154 0.00 0.00 39.81 1.73
281 282 5.651139 CGATACTCCTCGATTTAGGGGATTA 59.349 44.000 0.00 0.00 39.81 1.75
282 283 4.463186 CGATACTCCTCGATTTAGGGGATT 59.537 45.833 0.00 0.00 39.81 3.01
283 284 4.017808 CGATACTCCTCGATTTAGGGGAT 58.982 47.826 0.00 0.00 39.81 3.85
284 285 3.073503 TCGATACTCCTCGATTTAGGGGA 59.926 47.826 0.00 0.00 39.81 4.81
285 286 3.418995 TCGATACTCCTCGATTTAGGGG 58.581 50.000 0.00 0.00 42.38 4.79
294 295 5.758924 TCACAACAATATCGATACTCCTCG 58.241 41.667 7.41 0.00 39.99 4.63
295 296 7.598278 AGATCACAACAATATCGATACTCCTC 58.402 38.462 7.41 0.00 0.00 3.71
296 297 7.531857 AGATCACAACAATATCGATACTCCT 57.468 36.000 7.41 0.00 0.00 3.69
297 298 7.329717 GGAAGATCACAACAATATCGATACTCC 59.670 40.741 7.41 0.00 0.00 3.85
298 299 7.867909 TGGAAGATCACAACAATATCGATACTC 59.132 37.037 7.41 0.00 0.00 2.59
299 300 7.726216 TGGAAGATCACAACAATATCGATACT 58.274 34.615 7.41 0.00 0.00 2.12
300 301 7.946655 TGGAAGATCACAACAATATCGATAC 57.053 36.000 7.41 0.00 0.00 2.24
301 302 9.559732 AAATGGAAGATCACAACAATATCGATA 57.440 29.630 7.75 7.75 0.00 2.92
302 303 8.455903 AAATGGAAGATCACAACAATATCGAT 57.544 30.769 2.16 2.16 0.00 3.59
303 304 7.864108 AAATGGAAGATCACAACAATATCGA 57.136 32.000 0.00 0.00 0.00 3.59
304 305 9.603298 CATAAATGGAAGATCACAACAATATCG 57.397 33.333 0.00 0.00 0.00 2.92
352 353 8.806146 GGGCTTTTCCATTACATGTCAATATAT 58.194 33.333 0.00 0.00 36.21 0.86
353 354 7.782168 TGGGCTTTTCCATTACATGTCAATATA 59.218 33.333 0.00 0.00 36.21 0.86
354 355 6.610830 TGGGCTTTTCCATTACATGTCAATAT 59.389 34.615 0.00 0.00 36.21 1.28
355 356 5.954752 TGGGCTTTTCCATTACATGTCAATA 59.045 36.000 0.00 0.00 36.21 1.90
356 357 4.776837 TGGGCTTTTCCATTACATGTCAAT 59.223 37.500 0.00 0.00 36.21 2.57
357 358 4.155709 TGGGCTTTTCCATTACATGTCAA 58.844 39.130 0.00 0.00 36.21 3.18
358 359 3.772387 TGGGCTTTTCCATTACATGTCA 58.228 40.909 0.00 0.00 36.21 3.58
359 360 4.220602 ACTTGGGCTTTTCCATTACATGTC 59.779 41.667 0.00 0.00 36.58 3.06
360 361 4.021192 CACTTGGGCTTTTCCATTACATGT 60.021 41.667 2.69 2.69 36.58 3.21
361 362 4.021192 ACACTTGGGCTTTTCCATTACATG 60.021 41.667 0.00 0.00 36.58 3.21
362 363 4.021192 CACACTTGGGCTTTTCCATTACAT 60.021 41.667 0.00 0.00 36.58 2.29
363 364 3.320541 CACACTTGGGCTTTTCCATTACA 59.679 43.478 0.00 0.00 36.58 2.41
364 365 3.306019 CCACACTTGGGCTTTTCCATTAC 60.306 47.826 0.00 0.00 39.57 1.89
365 366 2.896685 CCACACTTGGGCTTTTCCATTA 59.103 45.455 0.00 0.00 39.57 1.90
366 367 1.693606 CCACACTTGGGCTTTTCCATT 59.306 47.619 0.00 0.00 39.57 3.16
367 368 1.341080 CCACACTTGGGCTTTTCCAT 58.659 50.000 0.00 0.00 39.57 3.41
368 369 2.819477 CCACACTTGGGCTTTTCCA 58.181 52.632 0.00 0.00 39.57 3.53
376 377 3.131046 GGAGAATATTTGCCACACTTGGG 59.869 47.826 0.00 0.00 44.15 4.12
378 379 5.389859 TTGGAGAATATTTGCCACACTTG 57.610 39.130 9.10 0.00 0.00 3.16
379 380 6.438425 AGATTTGGAGAATATTTGCCACACTT 59.562 34.615 9.10 0.00 0.00 3.16
380 381 5.954150 AGATTTGGAGAATATTTGCCACACT 59.046 36.000 9.10 6.94 0.00 3.55
381 382 6.212888 AGATTTGGAGAATATTTGCCACAC 57.787 37.500 9.10 5.32 0.00 3.82
382 383 6.855763 AAGATTTGGAGAATATTTGCCACA 57.144 33.333 9.10 4.78 0.00 4.17
383 384 7.322664 TGAAAGATTTGGAGAATATTTGCCAC 58.677 34.615 9.10 0.99 0.00 5.01
384 385 7.479352 TGAAAGATTTGGAGAATATTTGCCA 57.521 32.000 6.22 6.22 0.00 4.92
385 386 7.278646 GGTTGAAAGATTTGGAGAATATTTGCC 59.721 37.037 0.00 0.00 0.00 4.52
386 387 7.818930 TGGTTGAAAGATTTGGAGAATATTTGC 59.181 33.333 0.00 0.00 0.00 3.68
387 388 9.362539 CTGGTTGAAAGATTTGGAGAATATTTG 57.637 33.333 0.00 0.00 0.00 2.32
388 389 9.093458 ACTGGTTGAAAGATTTGGAGAATATTT 57.907 29.630 0.00 0.00 0.00 1.40
389 390 8.655935 ACTGGTTGAAAGATTTGGAGAATATT 57.344 30.769 0.00 0.00 0.00 1.28
390 391 8.655935 AACTGGTTGAAAGATTTGGAGAATAT 57.344 30.769 0.00 0.00 0.00 1.28
391 392 7.723616 TGAACTGGTTGAAAGATTTGGAGAATA 59.276 33.333 0.00 0.00 0.00 1.75
392 393 6.550854 TGAACTGGTTGAAAGATTTGGAGAAT 59.449 34.615 0.00 0.00 0.00 2.40
393 394 5.890985 TGAACTGGTTGAAAGATTTGGAGAA 59.109 36.000 0.00 0.00 0.00 2.87
394 395 5.445069 TGAACTGGTTGAAAGATTTGGAGA 58.555 37.500 0.00 0.00 0.00 3.71
395 396 5.532406 TCTGAACTGGTTGAAAGATTTGGAG 59.468 40.000 0.00 0.00 0.00 3.86
396 397 5.445069 TCTGAACTGGTTGAAAGATTTGGA 58.555 37.500 0.00 0.00 0.00 3.53
397 398 5.772825 TCTGAACTGGTTGAAAGATTTGG 57.227 39.130 0.00 0.00 0.00 3.28
398 399 5.979517 GGTTCTGAACTGGTTGAAAGATTTG 59.020 40.000 19.05 0.00 0.00 2.32
399 400 5.656416 TGGTTCTGAACTGGTTGAAAGATTT 59.344 36.000 19.05 0.00 0.00 2.17
400 401 5.200483 TGGTTCTGAACTGGTTGAAAGATT 58.800 37.500 19.05 0.00 0.00 2.40
401 402 4.792068 TGGTTCTGAACTGGTTGAAAGAT 58.208 39.130 19.05 0.00 0.00 2.40
402 403 4.229304 TGGTTCTGAACTGGTTGAAAGA 57.771 40.909 19.05 0.00 0.00 2.52
403 404 5.284079 CAATGGTTCTGAACTGGTTGAAAG 58.716 41.667 19.05 0.00 0.00 2.62
404 405 4.441356 GCAATGGTTCTGAACTGGTTGAAA 60.441 41.667 23.63 5.40 0.00 2.69
405 406 3.068024 GCAATGGTTCTGAACTGGTTGAA 59.932 43.478 23.63 6.38 0.00 2.69
406 407 2.622942 GCAATGGTTCTGAACTGGTTGA 59.377 45.455 23.63 6.42 0.00 3.18
407 408 2.624838 AGCAATGGTTCTGAACTGGTTG 59.375 45.455 19.05 19.09 0.00 3.77
408 409 2.949447 AGCAATGGTTCTGAACTGGTT 58.051 42.857 19.05 9.42 0.00 3.67
409 410 2.664402 AGCAATGGTTCTGAACTGGT 57.336 45.000 19.05 12.61 0.00 4.00
410 411 3.068590 ACAAAGCAATGGTTCTGAACTGG 59.931 43.478 19.05 8.28 0.00 4.00
411 412 4.293415 GACAAAGCAATGGTTCTGAACTG 58.707 43.478 19.05 11.34 0.00 3.16
412 413 3.319122 GGACAAAGCAATGGTTCTGAACT 59.681 43.478 19.05 0.00 0.00 3.01
413 414 3.068024 TGGACAAAGCAATGGTTCTGAAC 59.932 43.478 12.05 12.05 0.00 3.18
414 415 3.295093 TGGACAAAGCAATGGTTCTGAA 58.705 40.909 0.00 0.00 0.00 3.02
415 416 2.942804 TGGACAAAGCAATGGTTCTGA 58.057 42.857 0.00 0.00 0.00 3.27
416 417 3.553508 CCTTGGACAAAGCAATGGTTCTG 60.554 47.826 0.00 2.40 34.24 3.02
417 418 2.629617 CCTTGGACAAAGCAATGGTTCT 59.370 45.455 0.00 0.00 34.24 3.01
418 419 2.627699 TCCTTGGACAAAGCAATGGTTC 59.372 45.455 0.00 0.00 34.24 3.62
419 420 2.676748 TCCTTGGACAAAGCAATGGTT 58.323 42.857 0.00 0.00 34.24 3.67
420 421 2.380064 TCCTTGGACAAAGCAATGGT 57.620 45.000 0.00 0.00 34.24 3.55
421 422 3.749665 TTTCCTTGGACAAAGCAATGG 57.250 42.857 0.00 0.00 34.24 3.16
444 445 9.578576 ACCTACTACAAATGATGATGCATATTT 57.421 29.630 0.00 0.00 0.00 1.40
445 446 9.578576 AACCTACTACAAATGATGATGCATATT 57.421 29.630 0.00 0.00 0.00 1.28
446 447 9.578576 AAACCTACTACAAATGATGATGCATAT 57.421 29.630 0.00 0.00 0.00 1.78
447 448 8.978874 AAACCTACTACAAATGATGATGCATA 57.021 30.769 0.00 0.00 0.00 3.14
448 449 7.886629 AAACCTACTACAAATGATGATGCAT 57.113 32.000 0.00 0.00 0.00 3.96
449 450 7.362834 CCAAAACCTACTACAAATGATGATGCA 60.363 37.037 0.00 0.00 0.00 3.96
450 451 6.974622 CCAAAACCTACTACAAATGATGATGC 59.025 38.462 0.00 0.00 0.00 3.91
451 452 8.279970 TCCAAAACCTACTACAAATGATGATG 57.720 34.615 0.00 0.00 0.00 3.07
452 453 9.125026 GATCCAAAACCTACTACAAATGATGAT 57.875 33.333 0.00 0.00 0.00 2.45
453 454 8.106462 TGATCCAAAACCTACTACAAATGATGA 58.894 33.333 0.00 0.00 0.00 2.92
454 455 8.279970 TGATCCAAAACCTACTACAAATGATG 57.720 34.615 0.00 0.00 0.00 3.07
455 456 8.906867 CATGATCCAAAACCTACTACAAATGAT 58.093 33.333 0.00 0.00 0.00 2.45
456 457 8.106462 TCATGATCCAAAACCTACTACAAATGA 58.894 33.333 0.00 0.00 0.00 2.57
457 458 8.184192 GTCATGATCCAAAACCTACTACAAATG 58.816 37.037 0.00 0.00 0.00 2.32
458 459 7.339466 GGTCATGATCCAAAACCTACTACAAAT 59.661 37.037 0.00 0.00 0.00 2.32
459 460 6.657541 GGTCATGATCCAAAACCTACTACAAA 59.342 38.462 0.00 0.00 0.00 2.83
460 461 6.177610 GGTCATGATCCAAAACCTACTACAA 58.822 40.000 0.00 0.00 0.00 2.41
461 462 5.338871 GGGTCATGATCCAAAACCTACTACA 60.339 44.000 20.69 0.00 0.00 2.74
462 463 5.123936 GGGTCATGATCCAAAACCTACTAC 58.876 45.833 20.69 0.00 0.00 2.73
463 464 4.785914 TGGGTCATGATCCAAAACCTACTA 59.214 41.667 25.82 0.00 38.97 1.82
464 465 3.591527 TGGGTCATGATCCAAAACCTACT 59.408 43.478 25.82 0.00 38.97 2.57
465 466 3.947834 CTGGGTCATGATCCAAAACCTAC 59.052 47.826 27.50 0.00 41.88 3.18
466 467 3.053693 CCTGGGTCATGATCCAAAACCTA 60.054 47.826 27.50 6.28 41.88 3.08
467 468 2.291800 CCTGGGTCATGATCCAAAACCT 60.292 50.000 27.50 0.00 41.88 3.50
468 469 2.102578 CCTGGGTCATGATCCAAAACC 58.897 52.381 27.50 8.98 41.88 3.27
469 470 3.085952 TCCTGGGTCATGATCCAAAAC 57.914 47.619 27.50 0.50 41.88 2.43
487 488 1.467920 CAGGGTCCATGCTTTCTTCC 58.532 55.000 0.00 0.00 0.00 3.46
490 491 0.622665 CTCCAGGGTCCATGCTTTCT 59.377 55.000 0.00 0.00 0.00 2.52
494 495 3.415087 GCCTCCAGGGTCCATGCT 61.415 66.667 0.00 0.00 37.43 3.79
558 559 4.329545 TGCTTGGCTCCCCGTGAC 62.330 66.667 0.00 0.00 0.00 3.67
695 706 5.912955 AGAATCTTTCGCCTTTAAACAAACG 59.087 36.000 0.00 0.00 34.02 3.60
723 734 0.326264 CCTACAAAGGCTGGCTGTCT 59.674 55.000 3.84 0.00 35.64 3.41
750 761 3.308705 GGACGGGAGGAACGTGGT 61.309 66.667 0.00 0.00 45.68 4.16
971 987 1.079405 TTCGATGAACCGCCCTCAC 60.079 57.895 0.00 0.00 0.00 3.51
994 1010 0.753111 CCAGCCTTCCCCATTGCTAC 60.753 60.000 0.00 0.00 31.69 3.58
996 1012 2.361771 CCAGCCTTCCCCATTGCT 59.638 61.111 0.00 0.00 33.52 3.91
1081 1097 2.335011 CGCCGAGTCACACTGTGA 59.665 61.111 15.86 7.84 40.50 3.58
1125 1141 2.131067 CCTCTTCTCCCTCGGGCTC 61.131 68.421 0.00 0.00 34.68 4.70
1323 1348 4.049817 AGGTCGTCCTCCGCCTCT 62.050 66.667 0.00 0.00 40.58 3.69
1422 1453 2.159824 TCAAACTTGTTCGCGTCAACAA 59.840 40.909 20.63 20.63 42.68 2.83
1424 1455 2.445453 TCAAACTTGTTCGCGTCAAC 57.555 45.000 5.77 4.65 0.00 3.18
1425 1456 4.797693 TTATCAAACTTGTTCGCGTCAA 57.202 36.364 5.77 12.24 0.00 3.18
1426 1457 4.212425 ACATTATCAAACTTGTTCGCGTCA 59.788 37.500 5.77 4.13 0.00 4.35
1427 1458 4.549599 CACATTATCAAACTTGTTCGCGTC 59.450 41.667 5.77 1.06 0.00 5.19
1428 1459 4.024387 ACACATTATCAAACTTGTTCGCGT 60.024 37.500 5.77 0.00 0.00 6.01
1429 1460 4.463209 ACACATTATCAAACTTGTTCGCG 58.537 39.130 0.00 0.00 0.00 5.87
1430 1461 7.075741 AGTAACACATTATCAAACTTGTTCGC 58.924 34.615 0.00 0.00 29.82 4.70
1431 1462 7.744715 GGAGTAACACATTATCAAACTTGTTCG 59.255 37.037 0.00 0.00 29.82 3.95
1432 1463 8.564574 TGGAGTAACACATTATCAAACTTGTTC 58.435 33.333 0.00 0.00 29.82 3.18
1470 1505 8.629158 ACATTGTGTTTTAACTGAGCTAATCAA 58.371 29.630 0.00 0.00 37.52 2.57
1546 1594 5.264060 CTGCAGAATTTGTTCAATTGCAG 57.736 39.130 8.42 17.81 44.56 4.41
1616 1664 2.282745 GCCTTCCTTGCCTGCACT 60.283 61.111 0.00 0.00 0.00 4.40
1645 1693 1.265236 CAGCTTCACCAGACCTCTCT 58.735 55.000 0.00 0.00 0.00 3.10
1649 1697 1.374190 CTGCAGCTTCACCAGACCT 59.626 57.895 0.00 0.00 0.00 3.85
1932 1986 3.296836 GCATGCACCAGCCACACA 61.297 61.111 14.21 0.00 41.13 3.72
1934 1988 2.986979 CTGCATGCACCAGCCACA 60.987 61.111 18.46 0.00 41.13 4.17
1935 1989 3.755628 CCTGCATGCACCAGCCAC 61.756 66.667 18.46 0.00 41.13 5.01
1942 1996 0.393402 TGTCCATCTCCTGCATGCAC 60.393 55.000 18.46 4.08 0.00 4.57
1993 2047 3.018901 GGCTCCCCCATGTCCATT 58.981 61.111 0.00 0.00 0.00 3.16
2515 2575 4.838486 GACCCGCACTCGCTCTCG 62.838 72.222 0.00 0.00 35.30 4.04
2625 2685 5.167845 ACCAAGAAATGTGTTTGTGTTGTC 58.832 37.500 0.00 0.00 0.00 3.18
2632 2692 6.368516 ACACAAGAAACCAAGAAATGTGTTTG 59.631 34.615 3.04 0.00 45.29 2.93
2634 2694 6.036577 ACACAAGAAACCAAGAAATGTGTT 57.963 33.333 3.04 0.00 45.29 3.32
2656 2727 3.120060 AGTCAGCGATCAAATGCAGAAAC 60.120 43.478 0.00 0.00 0.00 2.78
2741 2819 3.710209 ATCTTGCTTCAGCTACCAGTT 57.290 42.857 0.00 0.00 42.66 3.16
2775 2853 6.173339 AGTTGTTCTGAAGTTGAGTCAAAGA 58.827 36.000 7.25 3.97 0.00 2.52
2825 2903 9.468532 AGTGCACATTATCTTTTCTTTTCTTTC 57.531 29.630 21.04 0.00 0.00 2.62
2826 2904 9.252962 CAGTGCACATTATCTTTTCTTTTCTTT 57.747 29.630 21.04 0.00 0.00 2.52
2858 2936 1.315257 GGAGCGCCCACATTTGACAT 61.315 55.000 2.29 0.00 34.14 3.06
2885 2963 1.166531 AAACGCAGCAAGGGAGTCAC 61.167 55.000 0.00 0.00 0.00 3.67
2889 2967 2.151202 TCTAAAAACGCAGCAAGGGAG 58.849 47.619 0.00 0.00 0.00 4.30
2892 2970 3.182372 GCTTTTCTAAAAACGCAGCAAGG 59.818 43.478 0.00 0.00 38.95 3.61
2893 2971 3.121696 CGCTTTTCTAAAAACGCAGCAAG 60.122 43.478 0.00 0.00 39.03 4.01
2914 2998 1.338337 ACCGGAGTTATGAGCAGATCG 59.662 52.381 9.46 0.00 0.00 3.69
2926 3010 0.893727 GGGCATTTGACACCGGAGTT 60.894 55.000 9.46 0.00 0.00 3.01
2944 3028 3.484649 CGGTGTCGTACGAATTATTCTGG 59.515 47.826 21.39 0.00 0.00 3.86
2947 3031 3.694734 TCCGGTGTCGTACGAATTATTC 58.305 45.455 21.39 6.96 33.95 1.75
2949 3033 2.684881 ACTCCGGTGTCGTACGAATTAT 59.315 45.455 21.39 0.00 33.95 1.28
2959 3043 0.108804 AGCATACAACTCCGGTGTCG 60.109 55.000 10.05 0.41 0.00 4.35
2990 3074 9.745011 TGCAACGCATGTGCATATTTGCTAATA 62.745 37.037 23.32 3.06 40.93 0.98
2992 3076 7.837163 TGCAACGCATGTGCATATTTGCTAA 62.837 40.000 23.32 9.02 40.93 3.09
3033 3117 1.474077 CTAGGGCAGTGCAATGGTTTC 59.526 52.381 18.61 0.00 0.00 2.78
3034 3118 1.549203 CTAGGGCAGTGCAATGGTTT 58.451 50.000 18.61 0.00 0.00 3.27
3035 3119 0.323725 CCTAGGGCAGTGCAATGGTT 60.324 55.000 18.61 0.00 0.00 3.67
3036 3120 1.304282 CCTAGGGCAGTGCAATGGT 59.696 57.895 18.61 0.00 0.00 3.55
3037 3121 4.247781 CCTAGGGCAGTGCAATGG 57.752 61.111 18.61 9.22 0.00 3.16
3048 3132 4.351111 AGACCATACTTATTTGGCCTAGGG 59.649 45.833 11.72 0.00 36.41 3.53
3049 3133 5.568620 AGACCATACTTATTTGGCCTAGG 57.431 43.478 3.67 3.67 36.41 3.02
3050 3134 8.837389 GTTTTAGACCATACTTATTTGGCCTAG 58.163 37.037 3.32 0.00 36.41 3.02
3051 3135 8.330247 TGTTTTAGACCATACTTATTTGGCCTA 58.670 33.333 3.32 0.00 36.41 3.93
3052 3136 7.122204 GTGTTTTAGACCATACTTATTTGGCCT 59.878 37.037 3.32 0.00 36.41 5.19
3053 3137 7.094118 TGTGTTTTAGACCATACTTATTTGGCC 60.094 37.037 0.00 0.00 36.41 5.36
3054 3138 7.822658 TGTGTTTTAGACCATACTTATTTGGC 58.177 34.615 0.00 0.00 36.41 4.52
3074 3158 7.042389 CGCTGGGTTAAAAATAAACAATGTGTT 60.042 33.333 0.00 0.00 43.41 3.32
3075 3159 6.422400 CGCTGGGTTAAAAATAAACAATGTGT 59.578 34.615 0.00 0.00 0.00 3.72
3076 3160 6.422400 ACGCTGGGTTAAAAATAAACAATGTG 59.578 34.615 0.00 0.00 0.00 3.21
3077 3161 6.517605 ACGCTGGGTTAAAAATAAACAATGT 58.482 32.000 0.00 0.00 0.00 2.71
3078 3162 6.642950 TGACGCTGGGTTAAAAATAAACAATG 59.357 34.615 0.00 0.00 0.00 2.82
3079 3163 6.750148 TGACGCTGGGTTAAAAATAAACAAT 58.250 32.000 0.00 0.00 0.00 2.71
3080 3164 6.145338 TGACGCTGGGTTAAAAATAAACAA 57.855 33.333 0.00 0.00 0.00 2.83
3081 3165 5.769484 TGACGCTGGGTTAAAAATAAACA 57.231 34.783 0.00 0.00 0.00 2.83
3082 3166 7.646446 AATTGACGCTGGGTTAAAAATAAAC 57.354 32.000 6.18 0.00 0.00 2.01
3083 3167 9.930693 AATAATTGACGCTGGGTTAAAAATAAA 57.069 25.926 6.18 0.00 0.00 1.40
3084 3168 9.575783 GAATAATTGACGCTGGGTTAAAAATAA 57.424 29.630 6.18 0.00 0.00 1.40
3085 3169 8.962679 AGAATAATTGACGCTGGGTTAAAAATA 58.037 29.630 6.18 1.99 0.00 1.40
3086 3170 7.836842 AGAATAATTGACGCTGGGTTAAAAAT 58.163 30.769 6.18 1.24 0.00 1.82
3087 3171 7.040340 TGAGAATAATTGACGCTGGGTTAAAAA 60.040 33.333 6.18 0.00 0.00 1.94
3088 3172 6.431543 TGAGAATAATTGACGCTGGGTTAAAA 59.568 34.615 6.18 0.00 0.00 1.52
3089 3173 5.941058 TGAGAATAATTGACGCTGGGTTAAA 59.059 36.000 6.18 1.89 0.00 1.52
3090 3174 5.492895 TGAGAATAATTGACGCTGGGTTAA 58.507 37.500 4.61 4.61 0.00 2.01
3091 3175 5.092554 TGAGAATAATTGACGCTGGGTTA 57.907 39.130 0.00 0.00 0.00 2.85
3092 3176 3.950397 TGAGAATAATTGACGCTGGGTT 58.050 40.909 0.00 0.00 0.00 4.11
3093 3177 3.627395 TGAGAATAATTGACGCTGGGT 57.373 42.857 0.00 0.00 0.00 4.51
3094 3178 3.689161 TGTTGAGAATAATTGACGCTGGG 59.311 43.478 0.00 0.00 0.00 4.45
3095 3179 4.944962 TGTTGAGAATAATTGACGCTGG 57.055 40.909 0.00 0.00 0.00 4.85
3096 3180 6.110543 TGATGTTGAGAATAATTGACGCTG 57.889 37.500 0.00 0.00 0.00 5.18
3097 3181 6.741992 TTGATGTTGAGAATAATTGACGCT 57.258 33.333 0.00 0.00 0.00 5.07
3098 3182 7.023575 AGTTTGATGTTGAGAATAATTGACGC 58.976 34.615 0.00 0.00 0.00 5.19
3099 3183 8.955061 AAGTTTGATGTTGAGAATAATTGACG 57.045 30.769 0.00 0.00 0.00 4.35
3100 3184 9.897744 TGAAGTTTGATGTTGAGAATAATTGAC 57.102 29.630 0.00 0.00 0.00 3.18
3101 3185 9.897744 GTGAAGTTTGATGTTGAGAATAATTGA 57.102 29.630 0.00 0.00 0.00 2.57
3102 3186 9.132521 GGTGAAGTTTGATGTTGAGAATAATTG 57.867 33.333 0.00 0.00 0.00 2.32
3103 3187 9.082313 AGGTGAAGTTTGATGTTGAGAATAATT 57.918 29.630 0.00 0.00 0.00 1.40
3104 3188 8.641498 AGGTGAAGTTTGATGTTGAGAATAAT 57.359 30.769 0.00 0.00 0.00 1.28
3105 3189 8.999431 GTAGGTGAAGTTTGATGTTGAGAATAA 58.001 33.333 0.00 0.00 0.00 1.40
3106 3190 7.330946 CGTAGGTGAAGTTTGATGTTGAGAATA 59.669 37.037 0.00 0.00 0.00 1.75
3107 3191 6.147821 CGTAGGTGAAGTTTGATGTTGAGAAT 59.852 38.462 0.00 0.00 0.00 2.40
3108 3192 5.465390 CGTAGGTGAAGTTTGATGTTGAGAA 59.535 40.000 0.00 0.00 0.00 2.87
3109 3193 4.988540 CGTAGGTGAAGTTTGATGTTGAGA 59.011 41.667 0.00 0.00 0.00 3.27
3110 3194 4.988540 TCGTAGGTGAAGTTTGATGTTGAG 59.011 41.667 0.00 0.00 0.00 3.02
3111 3195 4.951254 TCGTAGGTGAAGTTTGATGTTGA 58.049 39.130 0.00 0.00 0.00 3.18
3112 3196 4.377431 GCTCGTAGGTGAAGTTTGATGTTG 60.377 45.833 0.00 0.00 0.00 3.33
3113 3197 3.746492 GCTCGTAGGTGAAGTTTGATGTT 59.254 43.478 0.00 0.00 0.00 2.71
3114 3198 3.326747 GCTCGTAGGTGAAGTTTGATGT 58.673 45.455 0.00 0.00 0.00 3.06
3115 3199 2.673368 GGCTCGTAGGTGAAGTTTGATG 59.327 50.000 0.00 0.00 0.00 3.07
3116 3200 2.354805 GGGCTCGTAGGTGAAGTTTGAT 60.355 50.000 0.00 0.00 0.00 2.57
3117 3201 1.001633 GGGCTCGTAGGTGAAGTTTGA 59.998 52.381 0.00 0.00 0.00 2.69
3118 3202 1.439679 GGGCTCGTAGGTGAAGTTTG 58.560 55.000 0.00 0.00 0.00 2.93
3119 3203 0.037605 CGGGCTCGTAGGTGAAGTTT 60.038 55.000 0.00 0.00 0.00 2.66
3120 3204 1.590147 CGGGCTCGTAGGTGAAGTT 59.410 57.895 0.00 0.00 0.00 2.66
3121 3205 3.285371 CGGGCTCGTAGGTGAAGT 58.715 61.111 0.00 0.00 0.00 3.01
3131 3215 1.595382 GGATGAATCCACGGGCTCG 60.595 63.158 3.27 3.27 46.38 5.03
3132 3216 4.464262 GGATGAATCCACGGGCTC 57.536 61.111 4.38 0.00 46.38 4.70
3140 3224 1.406903 CAGGCAAAGGGGATGAATCC 58.593 55.000 0.26 0.26 46.41 3.01
3141 3225 0.749049 GCAGGCAAAGGGGATGAATC 59.251 55.000 0.00 0.00 0.00 2.52
3142 3226 0.688749 GGCAGGCAAAGGGGATGAAT 60.689 55.000 0.00 0.00 0.00 2.57
3143 3227 1.305213 GGCAGGCAAAGGGGATGAA 60.305 57.895 0.00 0.00 0.00 2.57
3144 3228 2.360191 GGCAGGCAAAGGGGATGA 59.640 61.111 0.00 0.00 0.00 2.92
3145 3229 3.142838 CGGCAGGCAAAGGGGATG 61.143 66.667 0.00 0.00 0.00 3.51
3161 3245 6.780706 AATGATAAACTATTAACCGGAGCG 57.219 37.500 9.46 0.00 0.00 5.03
3162 3246 8.828688 AGTAATGATAAACTATTAACCGGAGC 57.171 34.615 9.46 0.00 0.00 4.70
3189 3273 9.740710 ATAAGTTTCTGTGTATAAGCCTTTTCT 57.259 29.630 0.00 0.00 0.00 2.52
3191 3275 9.515226 TGATAAGTTTCTGTGTATAAGCCTTTT 57.485 29.630 0.00 0.00 0.00 2.27
3195 3279 9.032420 GTACTGATAAGTTTCTGTGTATAAGCC 57.968 37.037 0.00 0.00 0.00 4.35
3221 3305 1.081708 GCCGTGTTTTAACCAGCGG 60.082 57.895 12.68 12.68 39.20 5.52
3257 3341 1.993369 GCTTTTTCAGGCCGCGCTAT 61.993 55.000 5.56 0.00 0.00 2.97
3486 3616 4.585955 AAGTTAGCTATAGCGCTGCTAA 57.414 40.909 27.41 27.41 44.62 3.09
3489 3619 7.801315 CTATAGATAAGTTAGCTATAGCGCTGC 59.199 40.741 29.00 15.81 45.28 5.25
3605 3867 1.662044 GAACGAGGTACACCCGTGT 59.338 57.895 13.31 5.69 46.87 4.49
3615 3877 0.618981 GGGAATTGAGGGAACGAGGT 59.381 55.000 0.00 0.00 0.00 3.85
3620 3882 3.388552 AGAATGGGGAATTGAGGGAAC 57.611 47.619 0.00 0.00 0.00 3.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.