>input_sequence_44345
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-------------------------------------------------------ATGGGGAAGGCTGGGAGGTGGCTGA
GGAGCATCTTGGCCGGGAAAAGGGATGGCGGCAGGAGAGGCGGCAAGCGGGGGCAGTCACAGTGTGACTCGGCGCCTTTG
GCCGAGCTGCCGGCGGCCGCGAGCCCGAGGGAGAAGAGGCGATGGAGCTTCCGGCGGCCTGCGGCGGCGGTCAAGCCCGC
CGCCGCACCGTCGCCGTTGGCCCAGGAAGCAGGCGGTCTGTCGGTGTCGGTGTCCGAGCGCGAGCTTGAGCAGAGCAAGC
ACGCCGTGGCGGTGACCATGGCGGCC---------GCCGATGCCGCGGTGATACACCTGACGGCCCCAGAGGCGGAGG--
----ACGACCTCAACCTGTATGCCACCCCTGTCCAGGAGGCCGCGGCCGCAAGGATCCAGGCCACCTTCAGAGGCTACCT
GGTGAGCTTGCCTTGTTGACGCGAACAAGTTTGATAATGTGTTAC----TCCATCCATCTTCATTTGATTAGCTCAGTTA
AAACACAATGTTAATACA-A------------CTGTACTCCTGATTTAGCAATGCACGTTAAATCAAATGTCGCTGCAAT
TGAACAAATTCTGCAGAAACAGAAGCATTTCTTTTCTGATTTGAGCTGAGCATGTGACGTGCTAGTGCAGGCAAGGAAGG
CTCTGTGCGCGCAGAGAGGTCTGGTGAAGCTGCAGGCGCTGATCAGGGGCCACCTGGTGAGGAAGCAGGCCAGAGCCACG
CTCCGCCGCATGCAGGCGCTCCTCATGGCGCAGACCCGCGTGCGCGCGCAGCGCATGCGCATGCTCGAGGAGGAAGACAA
CGCCGCCGCCGCCGGCCCTGTTGACCGCCGGTCGCCGCAGCACCCCAGGCGCCGCCGCTCCTACGTAAGCCCGCACGCGA
TCGCTAGTG------GTACCGTGAGTGAGATCGTGCAGGCCGACATGGTTGAATCAGGGAATGTGTGTGTGGCTGGTGCA
TGCAGGAGATGGACAGGTCCGGCGAGGAGCATGCCAAGATCGTCGAAATGGACATGGGGGAGCCGCCGCGGCGTGGGCGG
AGCAGCTGCTCGGTCGCGGCGAGCGAACCATGGTCGACAGAGCGCCGGCGAGCCGAGTACTACGGCCCC------GGCCA
GTGCTCGCCAGCGCCGTCGGCGGCGTTCACCGAGATCACGAGCCCGCGCGCCTACAGCGGCCACTTCGAGGACTTCGAGC
CGGCGACGGCGCGTGTCAGCGCGTACGTGCCGGCAGGTTACGCCGACGAGGGCGAGTCCGCGTCCGAGTTCTTCCCGAAC
TACATGGCCAACACCCAGTCCTCGCGCGCCAAGGCCCGGTCCCAGAGCGCGCCGAAGCAGAGGCCCGACTCGCCGTCGCC
GCTGGAGCGGCAGCCGAGCCGGCGCCGCAGCGGCCCGGCGCCCCTGCCGAGAAGCGTCAAGATGCAGCGGTCGTCGTCGC
ACGTCGGCGTGCCCATGCCATCGTCGGCGGCCGCCATGTACGCGCAGCACTACCCGTGGTCGGTGAAGCTGGACCGGTCC
AGCGCGTCGCTCCACGAGAGCGAGTGCGGGTCGACGAGCTCCGTCCTCACCGCCGCTACCACCGTCGGTTACAGCCGCTC
CATGGTCGGATTCGAGGTGCGCGACCATGATTGGATCACAACTTGACAACACAAA-CAC----------ATTTCTTGGTT
TCTTGTGTTTCTGCATTTGATCG----CTGACTGATGAGAACTTGTTGATCTTGCTTCTCGTGCTGTTTCAGGTGCACAG
GAGCCAGTATTGA-------------------------------------------------------------------
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>chr2B_1_TraesCS2B01G492900
CTGCGACAACGTCAGCGCCGTCTACATGTCCACCAACCCCGTTCAGCATCAGCGTACCAAACACATCGAAATCGATCTCC
ACTTCGTTCGCGATCGTGTTGCCATGGGTCAGGTCCGTGTGCTGCATGTTCCCTCGTCACGCCAGTTTGCCGACATCTTG
ACGAAGGGCCTCCCGTCGCCGTTGTTTCTGGATTTTCGGTCCAGTCTCAACGTCCGCTCTCCTCCCGTTGTGACTGCGGG
GGAGTGTTAGACTAATATGTCACGTATCGTGACATATCTCCTAATCCCCTAAATCGAGGAGTATCGATATTGTTGTGATC
TTCCATTTATGGTTAGGATTGTAAATCTGTCTATATATTGACATGTAATGGAAAAGCCCAAGTGTGGCAAATATTCTCCA
AATCTTTCAACCAGTTCAGAACCATTGCTTTGTCCAAGGAAAAAAAATATGCATCATCATTTGTAGTAGGTTTTGGATCA
TGACCCAGGAAGAAAGCATGGACCCTGGAGGCTGCCTGCAACTGCACATCAAAGCCCGAGCGACTGTTCCAGATTCACGT
CACGGGGAGCCAAGCAGCCCCAGCGCCTCGTCATCGTGATGCATGAGACAATGATCCATGATTGACATGGACCCCGGCAG
GCCAGCTCTG----------GCTGATCTGAGCTCAGCTCTCCGAGTACAGTGCACTCACTTGCTGCGTTTGTTTAAAGGC
GAAAGATTCTGACAGACAGCCAGCCTTTGTAGGGAAGCTCACCACGTTCCTCCCGTCCCGCCCGCACATGCGCTCGCCGA
CCGGGCGCCAATGCCATTGCTCGGCGGCTCCCGTCGGTTGACTGACACGTTGTGCCACTGTTCCAAGCTCGCGCGGCGCG
GCCGGGGTGGTTGGCTGGTTGGTGATGGCGCTTGCAATGCCTAGC-AGGCTTCTC----TGTCGCCGGGGGCTATAATAT
AGTTCGGTCCGTCGGCTCTGTTGTGGGTGAGGGCGGTTCATCGAAGGTGGTAGCAATGGGGAAGGCTGGGAGGTGGCTGA
GGAGCATCTTGGCCGGGAAAAGGGATGGCGGCAGGAGAGGCGGCAAGCGGGGGCAGTCACAGTGTGACTCGGCGCCTTTG
GCCGAGCTGCCGGCGGCCGCGAGCCCGAGGGAGAAGAGGCGATGGAGCTTCCGGCGGCCTGCGGCGGCGGTCAAGCCCGC
CGCCGCACCGTCGCCGTTGGCCCAGGAAGCAGGCGGTCTGTCGGTGTCGGTGTCCGAGCGCGAGCTTGAGCAGAGCAAGC
ACGCCGTGGCGGTGACCATGGCGGCC---------GCCGATGCCGCGGTGATACACCTGACGGCCCCAGAGGCGGAGG--
----ACGACCTCAACCTGTATGCCACCCCTGTCCAGGAGGCCGCGGCCGCAAGGATCCAGGCCACCTTCAGAGGCTACCT
GGTGAGCTTGCCTTGTTGACGCGAACAAGTTTGATAATGTGTTAC----TCCATCCATCTTCATTTGATTAGCTCAGTTA
AAACACAATGTTAATACA-A------------CTGTACTCCTGATTTAGCAATGCACGTTAAATCAAATGTCGCTGCAAT
TGAACAAATTCTGCAGAAACAGAAGCATTTCTTTTCTGATTTGAGCTGAGCATGTGACGTGCTAGTGCAGGCAAGGAAGG
CTCTGTGCGCGCAGAGAGGTCTGGTGAAGCTGCAGGCGCTGATCAGGGGCCACCTGGTGAGGAAGCAGGCCAGAGCCACG
CTCCGCCGCATGCAGGCGCTCCTCATGGCGCAGACCCGCGTGCGCGCGCAGCGCATGCGCATGCTCGAGGAGGAAGACAA
CGCCGCCGCCGCCGGCCCTGTTGACCGCCGGTCGCCGCAGCACCCCAGGCGCCGCCGCTCCTACGTAAGCCCGCACGCGA
TCGCTAGTG------GTACCGTGAGTGAGATCGTGCAGGCCGACATGGTTGAATCAGGGAATGTGTGTGTGGCTGGTGCA
TGCAGGAGATGGACAGGTCCGGCGAGGAGCATGCCAAGATCGTCGAAATGGACATGGGGGAGCCGCCGCGGCGTGGGCGG
AGCAGCTGCTCGGTCGCGGCGAGCGAACCATGGTCGACAGAGCGCCGGCGAGCCGAGTACTACGGCCCC------GGCCA
GTGCTCGCCAGCGCCGTCGGCGGCGTTCACCGAGATCACGAGCCCGCGCGCCTACAGCGGCCACTTCGAGGACTTCGAGC
CGGCGACGGCGCGTGTCAGCGCGTACGTGCCGGCAGGTTACGCCGACGAGGGCGAGTCCGCGTCCGAGTTCTTCCCGAAC
TACATGGCCAACACCCAGTCCTCGCGCGCCAAGGCCCGGTCCCAGAGCGCGCCGAAGCAGAGGCCCGACTCGCCGTCGCC
GCTGGAGCGGCAGCCGAGCCGGCGCCGCAGCGGCCCGGCGCCCCTGCCGAGAAGCGTCAAGATGCAGCGGTCGTCGTCGC
ACGTCGGCGTGCCCATGCCATCGTCGGCGGCCGCCATGTACGCGCAGCACTACCCGTGGTCGGTGAAGCTGGACCGGTCC
AGCGCGTCGCTCCACGAGAGCGAGTGCGGGTCGACGAGCTCCGTCCTCACCGCCGCTACCACCGTCGGTTACAGCCGCTC
CATGGTCGGATTCGAGGTGCGCGACCATGATTGGATCACAACTTGACAACACAAA-CAC----------ATTTCTTGGTT
TCTTGTGTTTCTGCATTTGATCG----CTGACTGATGAGAACTTGTTGATCTTGCTTCTCGTGCTGTTTCAGGTGCACAG
GAGCCAGTATTGA---GTAACTGGTAGCTGAAGCAAGATATAGCACTCCATGTCTTTGACTCAACTTCAGAACAACTCAA
AGATAATGCGCACTCCGTTTCGGAAAGAAAAGAAAAGATAATGTGCACTGTGTGCATGTCAAATGTGGGCGCTCCATGCC
TTGTGACTCCCT----TGCTGCGTTTT--TAGAAAAGCGATCTGCTCATAACTCCGGTGTCAAATGCCCAGAATAATTCG
TACGACACCGGAGTTGTATGCTTTCTACCAGACTATTAGCAAATATGCACATGCGTTGCATTAATAGACTAAAAAAGAAA
CCATTGCACTGCCCTAGGCCAAATAAGTATGGTCTAAAACACATTGTTTATTTTTAACCCAGCGTCAATTATTCTCAACA
TCAAACTTCACCTACGAGCCCGTGGATTCATCCCCTTTGCCTGCCGCTCCGGTTAATAGTTTATCATTACTAAGAAAAGG
CTTATACACAGAAACTTATCAGTACCGCTGGTTAAAACACGGCGCTAATGCTATCTAACAATAGCGCGGCCTGAAAAAGC
ACACTACTGCTACATAAATAGCAGTAGCGCGTCCTTCATAAAAAGCGCTACTACTATAACTGTTACACCATTGCCGCCAG
GCTTGGTATAGTAGTAGCGCCCTTTTAAGGACCGCGCTACTGCTAACAAAATAGTAGCAGCGTGTTTTAAGGCGACAGTG
CTGCAACT---------AAA------------------AA-------------------AAAAAGAGAAAAGGAAAATTA
AAAAAAGAAAAAAAGTTAGC------------------------------------------------------------
----------AGCGCTATAGCTAACTTATCT-------------------------------------------------
-------------ATAGCAGTAACGCGTTCCGTGAGAAAACGCTATAGCTAAGTAGCTATAGCGCTTGTCGGGAAAAAGC
GCTACTACTAAGTTTGACTTGCCCCTACACGGGTGTACCTCGTTCCCTCAATTCCCCATTCTTCTCGCGTCT-CCCCTAC
CTCTCCCTCGCCGCTCCTGCTCCCCTCGCCGCCCCTGCTC-CCTCGTCGTCCCTGCCTCCGCCGCCGTCACCGGAGCCGC
AC-------------------------
>chr2A_471
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----------------------------------------------------------------------TTTTGGATCA
TGACCCAAGAGGAATGCATGGACCCTGGAGGCTGCCTGCAACTACACTTCAAAGCCCGAGCGACTGTTTCAGATTCACAT
CACGGCGAGCCAAGTAGCCCCAGCGCCTCGTCATCGTGATGCATGAGACAACGATCCATGATTGACATGGACCCCGGCAG
GCCAGCTCTAGCTGATCTGAGCTGATCTGAGCTGAGCTCTCCGAGTACAGTGCACTCACTCGCTGTGTTTGTTTAAATGC
GAAAGATTCTGACTGACAGCCAGCCTTTGTAGGGAAGCTCTCCACGTTCCCCCCGTCCCGCCCGCACATGCGCTCGCCGA
CCGGGCGCCAATGCCATTGCTCGGCGGCTCCCGTCGGTTGACTGACACGTTGTGCCACTGTTCCAAGCTCGCGCGGCGCG
GCCGGGGTGGTTGGCTGGTTGGTGATGGCGCTTGCAATGCCTAGCTAGGCTTCTC----TGTCGCCGGGGGCTATAATAT
AGTTCAGTCCATCGGCTCTGTTGTGGCTGAGGGCGGTTCGTCGAAGGTGCCGGCGATGGGGAAGGCTGGGAGGTGGCTGA
GGAGCATCTTGGCCGGGAAAAGGGATGGCGGCAGGAGAGGGGGCAAGCGGGGGCAGGCGCAGTGTGACTCGACGCCTTTG
GCCGAGCTGCCGGCGGCTGCCATCCCGAGGGAGAAGAGGCGATGGAGCTTCCGAAGGCCTGCGGCGCCGGTCAAGACCGC
CGCCGCACCGTCGCCGTTGGCCCTGGAAGCAGGCGGTCTGTCGGAGTCGGTGTCGGAGCGCGAGCTTGAGCAGAGCAAGC
ACGCCGTGGCGGTGATCATGGCGGCC---------GCTGATCCCGCGGTGATACGGCTGACGGCACCCGAGGCGGAGGAT
GACCACGACCTCAACCTGTATGCCACCCCTGTCCAGGAGGCCGCGGCCGCAAGGATCCAGGCCACCTTCAGAGGCTACCT
GGTGAGCTTGACATC--------AACAAGTTTGATAATGTGTTCGTTGGTCCATCCATCTTCATGTGATTAGCTCAGTTA
AAACACAATGTTAATACGTA------------CTGTACTCCTGACTTAGCAATGCACGTTGAATCAAATGTCGATGCGAT
TGACCAAATTCTGCAGAAACAGAAGCATTTCTTTTCTGATTTGAGCTGAGCATGTGACGTGCTGGTGCAGGCAAGGAAGG
CTCTGTGCGCGCTGAGGGGTCTGGTGAAGCTGCAGGCGCTGATCAGGGGCCACCTGGTGAGGAAGCAGGCCAGAGCCACG
CTCCGCCGCATGCAGGCCCTCCTCATGGCGCAGACCCGCGTGCGCGCGCAGCGCATGCGCATGCTCGAGGAAGAAGACCA
------CGCCGCCGCCCCTGTCGACCGCCGGTCGCCGCAGCACCCCAGACGCCGCCGCTCCTACGTAAGCCCCCACGCGA
TCGCTAGTGCTAGTGGTACCGTGAGTGAGATCGTGCAGGCCGACATGGTTGAATCAGGGAATGTGCG-------------
TGCAGGAGATGGACAGGTCCGGCGAGGAGCATGCCAAGATCGTGGAGATGGACATGGGGGAGCCGCCGCGGCGGGGGCGG
AGCAGCTGCTCGGTCGCGGCGAGCGAGCCATGGTCGAGAGAGCGCCCTGGAGCAGAGTACCACGGCCCC------GGCCA
GTGCTCGCCAGCGCCGTCGGCGGCGTTCACCGAGATCACGAGCCCGCGCGCCTACAGCGGGCACTTCGAGGACTTCGAGC
CGGCGACGGCGCGTGTCAGCGCGTACGTGCCGGCAGGTTATGCCGACGAGGGCGAGTCCGCGTCCGAGTTCTTCCCCAAC
TACATGGCCAACACCCAGTCCTCGCGCGCCAAGGCCCGGTCCCAGAGCGCGCCGAAGCAGAGGCCCGACTCGCCGTCGCC
GCTGGAGCGGCAGCCGAGCCGGCGCCGCGGTGGCCCGGCGCCCCTGCCGAGAAGCGTCAAGATGCAGCGGTCGTCGTCGC
ACGTTGGCGTGCC------GTCGTCGGCGGCCGCCATGTACGCACAGTACTACCCGTGGTCGGTGAAGCTGGACCGGTCC
AGCGCGTCGCTCCATGAGAGCGAGTGCGGGTCGACGAGCTCCATCCTAACCGCAGCTACCACCGTCGGTTACAGCCGCTC
CATGGTCGGATTCGAGGTGCGCGACCATGATTGGATCACACACACGCGCGCGCGCGCAC----------ATTTGTTGGTT
TCTTGTATTTCTGCATTTGATCGCTGACTGACTGACGAGAACTTGTTGATCTTGCTTCTCGTGCTGTTTCAGGTGCACAG
GAACCAGTATTGA---GTTACTGGTAGCTGAAGCAACATATAGCACTCCATGCCTTTGACTCAACTTCAGAACAACTCAA
AGATAATGTGCACTCCGTTTCGACAAGAAAAGAAAAGATAATGTGCACTGTGTGCGTGTCAAATGTGGGCGCTCCATGCC
TTCTGAGTCGATCTCATGCTGCGTTTTACTAGCAAAGTGATCTGCTCATCACTCCGGTGTCAAATGCTCAAACTAATTCG
TATGACACCGGAGTTGTATGCTTTTTACAAGAC---TAGCAAATATGCGCATGTGTAACATTAATAAAATAAAAAA----
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>chr2D_471
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----------------------------------------------------------------------TTTTGGATCG
TGACCCAAGAGGAATGCTTGGACCCTGGAGGCTGCCTGCAACTGCACATCAAAGCCCGAGCGACTGTTCCAGATTCACAT
CACGGGGAGCTAAGCAGCCCCAGCGCCTCGTCATCGTGATGCATGAGACAATGATCCATGATTGACATGGACCCCGGCAG
GCCAGCTCTAGCTGATCTGAA-----CTCAGCTCAGCTCTCCGAGTACAGTGCACTCACTTGCTGTGTTTGTTTAAAGGC
GAAAGATTCTGACTGACAGCCAGCCTTTGTAGGGAAGCTCTCCACGTTCCTCCCGTCCCGCCCGCACATGCGCTCGCCGA
CCGGGCGCCAATGCCATTGCTCGGCGGCTCGCGTCGGTTGACTGACACGTTGTGCCACTGTTCCAAGCTCGCGCGGCGC-
GCCGGGGTGGTTGGCTGGTTGGTGATGGCGCTTCCAATGCCTAGC-AGGCTTCTTGATTTGTCGCCGGGGGCTATAATAT
AGTCCGGTCCGTCGGTTCTGTTGTGGCTGAGGGCGGTTCATCGAAGGTGCTCGCAATGGGGAAGGCTGCGAGGTGGCTGA
GGAGCATCTTGGCCGGGAAAAAGGATGGCGGCAGGAGAGGGGGCAAGCGGGGGCAGGCACAGTGTGACTCGACGCCTTTG
GCTGAGCTGCCGGCGGCTGCCAGCCCGAGGGAGAAGAGGCGATGGAGCTTCCGGAGGCCTGCGGCGGCGGTCAAGACCGC
TGCCGGGCCGTCGCCGTTGGCCCAGGAGGCAGGCGGTCTGTCGGTTACGGTGTCGGAGCGCGAGCTTGAGCAGAGCAAGC
GCGCCGTGGCGGTGGCCATGGCGACTGCAGCGGCTGCCGATGCCGCGGTGATACGGCTGACACCCCCCGAGGCGGAGG--
----ACGACCTCAACCTGTATGCCACCCCTGTCCAGGAGGCCGCAGCCGCGAGGATCCAGGCCACCTTCAGAGGCTACCT
GGTGAGCTTGACATC--------AACAAGTTTGATAATGTGTTAC----TCCATCCATCTTCATGTGATTAGCTCAGTTA
AAACACAATGTTAATACA-ATGTTGATACATACTGTACTCCTGATTTAGCAATGCACGTTAAATCAAATGTCGATGCAAT
TGAACAAATTCTGCAGAAACAGAAGCATTTCTTTTCTGATTTGCGCTGAGCATGTGACGTGCTGGTGCAGGCAAGGAAGG
CTCTGTGCGCACTGAGGGGTCTGGTGAAGCTGCAGGCGCTGATCAGGGGCCACCTGGTGAGGAAGCAGGCCAGAGCCACG
CTCCGCCGCATGCAGGCCCTCCTCATGGCACAGAACCGCGTGCGCGCGCAGCGCATGCGCATGCTCGAGGAGGAAGACCA
------CGCCGCCGCCCCTGTCGACCGCCGGTCGCCGCAGCACCCCAGACGCCGCCGCTCCTACGTAAGCCCGCACGCGA
GCGCTAGTACGTAGAACCT------TGAGATCGTGCAGGCCGGCATGGTTGAATCAGGGAATGTG----TGGCTGCTGCA
TGCAGGAAATGGACAGGTCCGGCGAGGAGCATGCCAAGATCGTCGAGATGGACATGGGGGAGCCGCCGCGGCGGGGGCGG
AGCAGCTGCTCGGTCGCGGCGAGCGAACCATGGTCGAGAGAGCGCCGGCGAGCCGAGTGCTACGGCCCCGGCCACGGCCA
GTGCTCGCCAGCGCCGTCGGCGGCGTTCACCGAGATCACGACCCCGCGCGCCTACAGCGGGCACTTCGAGGACTTCGAGC
CGGCGACGGCGCGCGTCAGCGCGTACGTGCCGGCAGGTTACGCCGACGAGGGCGAGTCCGCGTCCGAGTTCTGCCCGAAC
TACATGGCCAACACCCAGTCCTCGCGCGCCAAGGCCCGGTCCCAGAGCGCGCCGAAGCAGAGGCCCGACTCGCCGTCGCC
GCTGGAGCGGCAGCCGAGCCGGCGCCGCGGTGGCCCGGCGCCCCTGCCGAGAAGCGTCAAGATGCAGCGGTCGTCGTCGC
ACGTCGGCGTGCC------ATCGTCGGCGGCCGCCATGTACGCACAGTACTACCCGTGGGCGGTGAAGCTGGACCGGTCC
AGCGCGTCGCTCCATGAGAGCGAGTGCGGGTCGACGAGCTCCGTCCTCACCGCCGCTACCACCGTCGGTTACAGCCGCTC
CATGGTCGGATTCGAGGTGCGCGACCATGATTGGATCACAACTTCACAACAAACACACAAATAAACAGAATTTCTTGGTT
TCTTGTATTTCTTCATTTGATCGCTGACT----GATGAGAACTTCTTGATCTTTCTTCTCGTGTTGTTTCAGGTGCACAG
GAACCAGTACTGATGAGTCACTGCTAGCAGAAGCAAGATATAG-------------------------------------
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>chr3D_3178
TTACAC--------------------------------------------------------------------------
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-------------------------------------------------------------------TACTAGGGAAAAG
CTTATACACAGAGACTTATCAGTAGCGCTTGTTAAAACACGGCGCTACTGCTATCTAACAGTAGCGCGGTATGAAAAAAC
ATGCTATTGCTACATATATAGCAGTAGCGCGTCCTTCATAAAAAGCACTACAACTATAACTGTTACACCGTTGCCGCCAG
GCTTGGTATAGTAGTAGCGCCCTTCTAAGGACAGCGCTACCGCTAACAAAATAGTAGGAGCGTGTTTTAAGGCGACAGTG
CTTTAACTAAGAAAAGGAAA------------------AG-------------------AAAAAAAGAAAAGGAAAATTA
AAGAAAAATAAAAA-ATGCAACCAATAGCAGCAGCGCGTTTTCACGAAAGCGCTATAGCTACTTTAGCTATAGCGCA-TT
TTCACGAACAAGCGCTATAGCTAACTTATCT-------------------------------------------------
-------------ATAGCGGTAGCACGTTCCGTCAGAAAGCGCTATAGCTAAGTAGCAATAGCGCTTGTTGGGAAAAAGC
GCTACTACTAAGTTTGACTTGCCCCTGCATGGGCGTTCCTCCTTCCCTCAACTCCCCATTCTTCTCGCGTCG-CCCTACC
T------------------CT-CCCTCACCGCCCTTGCTC-CCTCGCTGTCCCTGCCTCCGTCGCCGCCACCGGAGCCGC
GCGCCATCGCCGCCACCGGAGCCGCAC
>chr6D_3179
TAG-----------------------------------------------------------------------------
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----------------------------------------------------------------CAATACTAGGGAAAAG
CTTATACATAGGGACTTATCAGTAGTGTTGGTCAAAACACGGCGCTACTGCTATCTAACAGTAGCATGGCTTGAAAAAGC
ACACTACTGCTACATAAATATCAGTAGCGTGTCCTTCATAAAAAGCGCTGCTACTATAACTGTTACACCGTTGCCGCCAG
GCTTGGTATAGTTGTAGCACCCTTTTAAGGACCGCGCTACTGCTAACAAAATAGTAGCAGCACATTTTAAGGTGACAGTG
CTGCAACTAAGAAAATGAAAAGAAAAGA-AAAAAGGAAAG-------------------AAAAAAAGAAAAGGTAAATTA
AAGAAAAATAAAAA-ATGTAAGCAATAGCAGCAGCGCGTTTTCATGGAAGAGCTATAGCTAC-TTAGCTATAGCATG-TT
TTAAAGAACAAGCGCTATAGCTAA--------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CTTGCCCCTGCGCGGGCATTCCTCCTGCCCCCAATTCCCCATTCATCTCGCATCT-CCCCTAC
CTCTCCCTCGCCGGCCCTACT-CCCTCGCAGCCCCTGCTC-CCTCGCCATCCCTGCCTCCATTGCCGTCACCGA------
--------GCC----------------
>chr3D_3185
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-------------------------------------------------------------------TACTAGGGAAATG
CTTATACACAGAGACTTATCAGTAGCGCTTGTTAAAACACGACAGTACTACTATCTAACAGTAGCGCGGTATGAAAAAGC
ATGCTACTGCTACATAAATAGCAGTAGTGCGTCCTTCATAAAAAGCGCTACTAGTATAACTGTTACACCATTGCTGCCAG
GCTTGGTATAGTAGTAGCGCCCTTCTAAGGACAGCGCTACTGCTAACAAAATAGTAGCAGCGTGATTTAAGGCGACAGTG
CTGCAACCAAGAAAAGGAAA------------------AGAAAAGACAAAAGGAAAAGAAAAAAAAGAAAAGGAAAATTA
AAGAAAAAGAAAAAAATGCAAGCAATAGCAGCAACGCGTTTTC-------------------------------------
---ACGAACAAGAGCTATAGCTAACTTATCT-------------------------------------------------
-------------ATAGAAGTAGCACGTTCCGTCAGAAAGCGCTATAGCTAAGTAGCTATAGCGCTTGTCAGGAAAAAGC
GCTACTACTAAGTTTGACTTTCCCCTGCATGGGTGTTCCTCCTTCCCTCAATTCCCCATTCTTCTCGCATCA-CCCTATC
T------------------CT-CCCTCACCGCCCCTGCTC-CCTCGCCTTCCCTGCCTCCATCGTC--------------
---------------------------
>chr4D_3185
--------------------------------------------------------------------------------
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-------------------------------------------------------------------TACTAGGGAAAAG
CTTATACACAGAGACTTATCAGTAGCGCTGCTTAAAACACGGCGCTACTGCTACCTAATAGTAGCGCGGCCTGAGAAAGC
ACGCTACTGCTACATAAATAGCAGTAGCACGTCGTTCAT-AAAAGTACTACTACTATAACTGTTACACCGTTGCCGCCAG
GCTTGGTATAGTAGTAGCGCCCTTCTAAGGACCGCGCTACTGCTAACAAAATAGTAGCAGCACGTTTTAAGGCGACAGTG
TTGTAACTAAGAAAAGGAAAAGAAAAGATAAAAAGGAAAG-------------------A-TAAAAGAAAAGGAAAATGA
AAGAAAAAGAAAAA--TGTAAGAAATACCAGCAGCACATTTTCACGGAAGCGCTATAGCTACTTTAGCTATAGCGTG-TT
TTCACGAACAAGCGCTATAGCTAACTTATCC-------------------------------------------------
-------------ATAGCAGTAGCGCGTTCTGTCAGAAAGCGCTATAGCTAAGTAACTCTAGCGCTTGTCTGGAACAAGC
GCTACTACTAAGTTTGACTTGCCCCTGCGCGGGGGTTCCTCCTTACCCCAATTCCCCATTCTTCTCGCGTCTCCCCTACC
T------------------CT-CCCTCGCCGCCCCTGCTC-CGTCGCCGTCCCTGCCTCCGTCGCCGTC-----------
---------------------------
>chr6B_3187
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---------------------------------------------------------------------CTATAGAAAAG
CTTATATACAGAGACTTATAAGTAGCGCTGGTTAAAACACGACACTACTGCTATCTAACAGTAGCGCGGCCTGAAAAAGC
ACGCTACTGCTACATAAATAGCAGTAGCGTGTCCTTCATAAAAAGCGCTACTACTATAATGGTTACACCGTTGCCTCCAG
GCTTGGTATAGTAGTAGCGCCCTTCTCAGGACCGCGCTACTACTAACAAAATAGTAGCAGCGCAATTTAAGGCGACAGTG
CTGCAACTAAGAAAAGGAAAAGAAAAGA-AAAAAGGAAAG-------------------G-AAAAAGGAAAGGAAAATTA
AAGAAGAG--AAAAAACGTAAGCAATAGCACCAAAATGCTTTCACGGAAGCGCTATAGCTACTTTAGCTATAGCGCATTT
TTCACGAACAAGTGCTATAGCTAACTTAACTATAGCGCTTCCGTGCAAACACGATGCTGCTATTGCTTAACAAGCGCTAT
GGCTAACTTATATATAGCAGTAGCACGTTCCGTCAGAAAGCGCTATAGCTA-GTAGCTATAGCGCTTGTCGGGAAAAAGC
GCTACTACTAGGTTTGACTTGCCCCAGCCTGAGCGTTCCTCCTTCCCACAATTCCTCATTATTCTCACGTCTCCCCTACC
T------------------CT-CCCTCATCGCCCCTACTCCCCTCGCCGTCCCTGCCTCCGTTGCCGTCACCGA------
--------GCCTCCACCG---------
>SNPs
S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
-------S--S---S---------------------------------------------------------------S-
--------------------------------------------------------------------------------
---------S-------------------------------------------------------S--------------
-------------S--------------------------S---------------------------------------
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--------------------------S----------------------S-S----------------------------
----------------------------------------S---------------S--------------S--------
-----------------S--S---------------------------------S--------------------S----
------------------------------------------------------S-------------------------
------------------------------------------------------SS-----------S------------
--------------------------------------------------------------------------------
----------S-S-SSSSSSSSS-----------------------------------------S---------------
-------------------------------------------------------------------------S------
---------------------------------------------------------------S----------------
------------S---S---------------------------------------------------------------
-----------------S------------------------------------------------------------S-
SSSSSS--------S------S--------------------------S-------------------------------
-----------------------------------------------------------------S-SS------S----
----------------------------------------------S--------------------------S------
-------------------------------------S------------------------------------------
------------------------------------------------------------S-------------------
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----------------------------S-S-------------------------------------------------
-------------SSSSSS------------------------S---S--------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------S------S-S--------------------------
------S-------------------------------------------------------------------------
--S---------------S---------------------------------S---------------------------
--------S-------------SS-------------------------------S------------------------
--S---S--SS---------------------S----S-----------S-----------------S--S-S-------
--S---------------------S---S----SSS------------S----S--SS--------S-S-------SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-----S-S---S-
------------S-----------S----------------------S------------S-------------------
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---------------------------------------S------------------------S---------------
--S---S-S-----SS-SSS------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S----------S-----S----------------------------------------
--------------------------S---------S----S--------------------------------------
-------------SS---S--S------------------------S--------------S------------------
S--------------------------
>forward_36
----------------GCCGTCTACATGTCCACCAA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_1996
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GTGCA
TGCAGGAGATGGACA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>forward_1455
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TACCT
GGTGAGCTTGCCTTG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_3203
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--AAACTTCACCTACGAGCCCG----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
