Multiple sequence alignment - TraesCS2B01G459400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G459400 chr2B 100.000 3570 0 0 1 3570 653749565 653753134 0.000000e+00 6593.0
1 TraesCS2B01G459400 chr2B 99.127 458 4 0 3113 3570 382708211 382707754 0.000000e+00 824.0
2 TraesCS2B01G459400 chr2D 92.314 2498 138 28 630 3094 547272033 547274509 0.000000e+00 3500.0
3 TraesCS2B01G459400 chr2D 82.841 542 70 18 2594 3117 547572452 547572988 6.980000e-127 464.0
4 TraesCS2B01G459400 chr2A 94.237 2065 91 13 631 2680 690742541 690744592 0.000000e+00 3129.0
5 TraesCS2B01G459400 chr2A 91.627 633 46 4 1 628 690741941 690742571 0.000000e+00 869.0
6 TraesCS2B01G459400 chr2A 92.478 226 16 1 2895 3120 690745147 690745371 4.450000e-84 322.0
7 TraesCS2B01G459400 chr2A 98.333 120 2 0 2673 2792 690744741 690744860 1.000000e-50 211.0
8 TraesCS2B01G459400 chr6B 99.127 458 4 0 3113 3570 119166410 119166867 0.000000e+00 824.0
9 TraesCS2B01G459400 chr6B 99.125 457 4 0 3113 3569 51465359 51464903 0.000000e+00 822.0
10 TraesCS2B01G459400 chr1B 99.127 458 4 0 3113 3570 403571885 403572342 0.000000e+00 824.0
11 TraesCS2B01G459400 chr5B 99.339 454 3 0 3117 3570 135774099 135773646 0.000000e+00 822.0
12 TraesCS2B01G459400 chr5B 96.078 51 2 0 3 53 13706958 13707008 2.280000e-12 84.2
13 TraesCS2B01G459400 chr4B 98.908 458 5 0 3113 3570 405862991 405862534 0.000000e+00 819.0
14 TraesCS2B01G459400 chr4B 98.908 458 5 0 3113 3570 443068280 443068737 0.000000e+00 819.0
15 TraesCS2B01G459400 chr4B 98.491 464 7 0 3107 3570 503651735 503652198 0.000000e+00 819.0
16 TraesCS2B01G459400 chr4B 98.908 458 5 0 3113 3570 637433217 637433674 0.000000e+00 819.0
17 TraesCS2B01G459400 chr5A 93.333 60 4 0 1 60 219710286 219710345 4.910000e-14 89.8
18 TraesCS2B01G459400 chrUn 90.625 64 5 1 322 384 470796636 470796573 2.280000e-12 84.2
19 TraesCS2B01G459400 chr7D 91.489 47 4 0 2 48 99187099 99187145 8.270000e-07 65.8
20 TraesCS2B01G459400 chr7A 91.111 45 4 0 1 45 194059944 194059988 1.070000e-05 62.1
21 TraesCS2B01G459400 chr1A 94.444 36 2 0 1 36 495180331 495180296 4.980000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G459400 chr2B 653749565 653753134 3569 False 6593.00 6593 100.00000 1 3570 1 chr2B.!!$F1 3569
1 TraesCS2B01G459400 chr2D 547272033 547274509 2476 False 3500.00 3500 92.31400 630 3094 1 chr2D.!!$F1 2464
2 TraesCS2B01G459400 chr2D 547572452 547572988 536 False 464.00 464 82.84100 2594 3117 1 chr2D.!!$F2 523
3 TraesCS2B01G459400 chr2A 690741941 690745371 3430 False 1132.75 3129 94.16875 1 3120 4 chr2A.!!$F1 3119

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
622 628 0.107214 CCATTGGTCATAGGCACGGT 60.107 55.0 0.00 0.00 0.00 4.83 F
695 707 0.531974 TTGGAGTTGTCAGCGTCCAC 60.532 55.0 7.16 0.00 38.84 4.02 F
970 996 1.075425 CACTCGACTACTGCTGCTGC 61.075 60.0 8.89 8.89 40.20 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1906 1932 0.827368 AAGATGGAGACCTCGAAGGC 59.173 55.0 1.36 0.0 39.63 4.35 R
2070 2096 0.944386 TCACTGTGAAAAAGAGCGGC 59.056 50.0 8.27 0.0 0.00 6.53 R
2855 3088 1.186917 TGGCTTTTGGGGCATCACTG 61.187 55.0 0.00 0.0 36.85 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 92 1.317613 GTGCAAGGATCAACACCACA 58.682 50.000 0.00 0.00 0.00 4.17
99 100 2.393764 GATCAACACCACAAAAAGCCG 58.606 47.619 0.00 0.00 0.00 5.52
109 110 1.463444 ACAAAAAGCCGTAGTCATCGC 59.537 47.619 0.00 0.00 0.00 4.58
117 118 2.033151 GCCGTAGTCATCGCCATTAAAC 60.033 50.000 0.00 0.00 0.00 2.01
197 198 3.595190 AAAACCTAACTTCAGCACCCT 57.405 42.857 0.00 0.00 0.00 4.34
219 220 0.948678 GGAGCTAGCAGGACTCTACG 59.051 60.000 18.83 0.00 0.00 3.51
244 245 2.262637 AGGTCTGTTTAATCCGTCCCA 58.737 47.619 0.00 0.00 0.00 4.37
268 269 5.477607 TGAACGAACTTGAAGGAGGATTA 57.522 39.130 0.00 0.00 0.00 1.75
276 277 5.584913 ACTTGAAGGAGGATTAGAGTCTGA 58.415 41.667 1.86 0.00 0.00 3.27
317 320 2.243264 GCTGCCATCTGCTAGCGTC 61.243 63.158 10.77 0.00 42.00 5.19
322 325 0.312102 CCATCTGCTAGCGTCGATCA 59.688 55.000 10.77 0.00 0.00 2.92
380 383 2.370445 CGAGGCACCAGGATTCCCT 61.370 63.158 0.00 0.00 45.74 4.20
384 387 2.911143 CACCAGGATTCCCTCCCG 59.089 66.667 0.00 0.00 46.27 5.14
389 392 1.689582 AGGATTCCCTCCCGGACAC 60.690 63.158 0.73 0.00 46.27 3.67
395 398 4.087892 CCTCCCGGACACTGGCTG 62.088 72.222 0.73 0.00 0.00 4.85
409 412 2.429739 GCTGTCAAAGCGGCAAGC 60.430 61.111 1.45 0.00 43.45 4.01
428 431 1.363744 CAGAAGGGATGCGAGTTCAC 58.636 55.000 0.00 0.00 0.00 3.18
429 432 0.108615 AGAAGGGATGCGAGTTCACG 60.109 55.000 0.00 0.00 0.00 4.35
438 441 2.342648 GAGTTCACGGGCTCGGTT 59.657 61.111 12.42 0.00 41.39 4.44
441 444 4.243008 TTCACGGGCTCGGTTGCA 62.243 61.111 12.42 0.00 41.39 4.08
442 445 4.680237 TCACGGGCTCGGTTGCAG 62.680 66.667 12.42 0.00 41.39 4.41
447 450 2.811317 GGCTCGGTTGCAGAGACG 60.811 66.667 5.67 0.83 37.93 4.18
464 467 3.002371 GGAGGGGAGGAAGGCTTG 58.998 66.667 3.46 0.00 0.00 4.01
482 485 1.533625 TGCCATAGTCACTTTGTGCC 58.466 50.000 6.36 0.00 32.98 5.01
496 499 1.507140 TGTGCCAGGGGAAGGTATAG 58.493 55.000 0.00 0.00 0.00 1.31
499 502 1.294068 TGCCAGGGGAAGGTATAGTCT 59.706 52.381 0.00 0.00 0.00 3.24
501 504 2.960104 GCCAGGGGAAGGTATAGTCTGT 60.960 54.545 0.00 0.00 0.00 3.41
511 514 8.652290 GGGAAGGTATAGTCTGTAAATGAAGAT 58.348 37.037 0.00 0.00 0.00 2.40
542 545 3.904800 TCATTTCGAGCTGTGGGATAA 57.095 42.857 0.00 0.00 0.00 1.75
550 553 2.171448 GAGCTGTGGGATAAGACCATGT 59.829 50.000 0.00 0.00 40.70 3.21
574 577 1.359459 GACACGCCGATGGTCTTTCC 61.359 60.000 0.00 0.00 0.00 3.13
591 597 7.012327 TGGTCTTTCCATAATATCTTGCTTTCG 59.988 37.037 0.00 0.00 41.93 3.46
595 601 7.482654 TTCCATAATATCTTGCTTTCGAGTG 57.517 36.000 0.00 0.00 0.00 3.51
596 602 6.816136 TCCATAATATCTTGCTTTCGAGTGA 58.184 36.000 0.00 0.00 0.00 3.41
597 603 7.445121 TCCATAATATCTTGCTTTCGAGTGAT 58.555 34.615 0.00 0.00 0.00 3.06
598 604 7.933577 TCCATAATATCTTGCTTTCGAGTGATT 59.066 33.333 0.00 0.00 0.00 2.57
599 605 8.226448 CCATAATATCTTGCTTTCGAGTGATTC 58.774 37.037 0.00 0.00 0.00 2.52
600 606 8.986847 CATAATATCTTGCTTTCGAGTGATTCT 58.013 33.333 0.00 0.00 0.00 2.40
601 607 7.475771 AATATCTTGCTTTCGAGTGATTCTC 57.524 36.000 0.00 0.00 39.62 2.87
602 608 4.527509 TCTTGCTTTCGAGTGATTCTCT 57.472 40.909 0.00 0.00 40.75 3.10
603 609 4.489810 TCTTGCTTTCGAGTGATTCTCTC 58.510 43.478 5.80 5.80 40.75 3.20
604 610 3.238108 TGCTTTCGAGTGATTCTCTCC 57.762 47.619 9.53 0.00 40.75 3.71
605 611 2.562738 TGCTTTCGAGTGATTCTCTCCA 59.437 45.455 9.53 0.00 40.75 3.86
606 612 3.196469 TGCTTTCGAGTGATTCTCTCCAT 59.804 43.478 9.53 0.00 40.75 3.41
607 613 4.187694 GCTTTCGAGTGATTCTCTCCATT 58.812 43.478 9.53 0.00 40.75 3.16
608 614 4.033817 GCTTTCGAGTGATTCTCTCCATTG 59.966 45.833 9.53 0.00 40.75 2.82
609 615 3.808466 TCGAGTGATTCTCTCCATTGG 57.192 47.619 9.53 0.00 40.75 3.16
610 616 3.099905 TCGAGTGATTCTCTCCATTGGT 58.900 45.455 1.86 0.00 40.75 3.67
611 617 3.131223 TCGAGTGATTCTCTCCATTGGTC 59.869 47.826 1.86 0.00 40.75 4.02
612 618 3.118992 CGAGTGATTCTCTCCATTGGTCA 60.119 47.826 1.86 0.00 40.75 4.02
613 619 4.442612 CGAGTGATTCTCTCCATTGGTCAT 60.443 45.833 1.86 0.00 40.75 3.06
614 620 5.221322 CGAGTGATTCTCTCCATTGGTCATA 60.221 44.000 1.86 0.00 40.75 2.15
615 621 6.172136 AGTGATTCTCTCCATTGGTCATAG 57.828 41.667 1.86 0.00 0.00 2.23
616 622 5.071519 AGTGATTCTCTCCATTGGTCATAGG 59.928 44.000 1.86 0.00 0.00 2.57
617 623 3.845781 TTCTCTCCATTGGTCATAGGC 57.154 47.619 1.86 0.00 0.00 3.93
618 624 2.763039 TCTCTCCATTGGTCATAGGCA 58.237 47.619 1.86 0.00 0.00 4.75
619 625 2.435805 TCTCTCCATTGGTCATAGGCAC 59.564 50.000 1.86 0.00 0.00 5.01
620 626 1.138859 TCTCCATTGGTCATAGGCACG 59.861 52.381 1.86 0.00 0.00 5.34
621 627 0.180171 TCCATTGGTCATAGGCACGG 59.820 55.000 1.86 0.00 0.00 4.94
622 628 0.107214 CCATTGGTCATAGGCACGGT 60.107 55.000 0.00 0.00 0.00 4.83
623 629 1.681780 CCATTGGTCATAGGCACGGTT 60.682 52.381 0.00 0.00 0.00 4.44
624 630 1.401552 CATTGGTCATAGGCACGGTTG 59.598 52.381 0.00 0.00 0.00 3.77
695 707 0.531974 TTGGAGTTGTCAGCGTCCAC 60.532 55.000 7.16 0.00 38.84 4.02
826 841 4.262894 AGAATCTTCTTCGGTTAGCAACCA 60.263 41.667 15.40 3.66 42.64 3.67
883 898 3.324846 ACACTGCAAATCACTCCTCAGTA 59.675 43.478 0.00 0.00 33.93 2.74
886 901 4.040952 ACTGCAAATCACTCCTCAGTACTT 59.959 41.667 0.00 0.00 33.56 2.24
893 911 8.304596 CAAATCACTCCTCAGTACTTGTAACTA 58.695 37.037 0.00 0.00 0.00 2.24
970 996 1.075425 CACTCGACTACTGCTGCTGC 61.075 60.000 8.89 8.89 40.20 5.25
1327 1353 3.067480 GCCGGGACCAACGTATCGA 62.067 63.158 2.18 0.00 0.00 3.59
1552 1578 2.989253 TCGTCAAGCCGCTCCTCA 60.989 61.111 0.00 0.00 0.00 3.86
1645 1671 2.430244 TCGACTTCGCGCTGTTCC 60.430 61.111 5.56 0.00 39.60 3.62
2055 2081 3.247648 CGGAGGTATTTAATTCGTGCCAG 59.752 47.826 0.00 0.00 0.00 4.85
2070 2096 1.421410 GCCAGCATCGGTTCTACACG 61.421 60.000 0.00 0.00 0.00 4.49
2328 2354 2.675423 TGCTACGAGCCGGACACT 60.675 61.111 5.05 0.00 41.51 3.55
2443 2469 2.158667 ACCACTGTTGACCCAAGTAAGG 60.159 50.000 0.00 0.00 0.00 2.69
2453 2479 3.518303 GACCCAAGTAAGGCTTCTTCCTA 59.482 47.826 1.30 0.00 34.82 2.94
2457 2483 4.383226 CCAAGTAAGGCTTCTTCCTACTCC 60.383 50.000 1.30 0.00 34.82 3.85
2459 2510 5.469210 AGTAAGGCTTCTTCCTACTCCTA 57.531 43.478 1.30 0.00 34.82 2.94
2461 2512 5.836358 AGTAAGGCTTCTTCCTACTCCTATG 59.164 44.000 1.30 0.00 34.82 2.23
2467 2518 5.163353 GCTTCTTCCTACTCCTATGCTTCTT 60.163 44.000 0.00 0.00 0.00 2.52
2469 2520 5.772004 TCTTCCTACTCCTATGCTTCTTCT 58.228 41.667 0.00 0.00 0.00 2.85
2470 2521 6.912426 TCTTCCTACTCCTATGCTTCTTCTA 58.088 40.000 0.00 0.00 0.00 2.10
2472 2523 5.064558 TCCTACTCCTATGCTTCTTCTACG 58.935 45.833 0.00 0.00 0.00 3.51
2473 2524 4.822896 CCTACTCCTATGCTTCTTCTACGT 59.177 45.833 0.00 0.00 0.00 3.57
2475 2526 4.270834 ACTCCTATGCTTCTTCTACGTGA 58.729 43.478 0.00 0.00 0.00 4.35
2476 2527 4.705507 ACTCCTATGCTTCTTCTACGTGAA 59.294 41.667 0.00 0.00 0.00 3.18
2519 2573 4.119442 TCTTGTCTCTAATTACACGGCC 57.881 45.455 0.00 0.00 0.00 6.13
2534 2588 3.244284 ACACGGCCACATACTCTGTTTTA 60.244 43.478 2.24 0.00 35.29 1.52
2582 2636 5.985911 ACTTTACATAATGAGGGCGTACTT 58.014 37.500 0.00 0.00 0.00 2.24
2644 2700 4.855388 GTGCTCAACATGTTTCTTATGCAG 59.145 41.667 8.77 0.00 0.00 4.41
2645 2701 4.520111 TGCTCAACATGTTTCTTATGCAGT 59.480 37.500 8.77 0.00 0.00 4.40
2659 2715 7.518731 TCTTATGCAGTTTTGTTTGTCAAAC 57.481 32.000 19.57 19.57 44.39 2.93
2792 3000 6.170506 TGCGAGTTTGACCTATTTGAGTTAT 58.829 36.000 0.00 0.00 0.00 1.89
2801 3010 4.106341 ACCTATTTGAGTTATGGGATGGGG 59.894 45.833 0.00 0.00 0.00 4.96
2802 3011 3.618120 ATTTGAGTTATGGGATGGGGG 57.382 47.619 0.00 0.00 0.00 5.40
2806 3015 0.028642 AGTTATGGGATGGGGGAGCT 60.029 55.000 0.00 0.00 0.00 4.09
2855 3088 3.914426 TGAGAAGATGTCTTTAGGGCC 57.086 47.619 0.00 0.00 36.41 5.80
2858 3091 3.185455 AGAAGATGTCTTTAGGGCCAGT 58.815 45.455 6.18 0.00 36.11 4.00
2872 3105 1.593265 CCAGTGATGCCCCAAAAGC 59.407 57.895 0.00 0.00 0.00 3.51
2891 3124 8.923270 CCAAAAGCCATATTTAGGGAGAAAATA 58.077 33.333 0.00 0.00 34.30 1.40
2939 3330 5.069781 AGCTAACATATCCCTCAGACACTTC 59.930 44.000 0.00 0.00 0.00 3.01
2946 3337 0.969894 CCTCAGACACTTCGTCCCTT 59.030 55.000 0.00 0.00 46.69 3.95
3120 3513 2.039405 CCCTCCCATAGCCCCACT 60.039 66.667 0.00 0.00 0.00 4.00
3121 3514 2.455565 CCCTCCCATAGCCCCACTG 61.456 68.421 0.00 0.00 0.00 3.66
3122 3515 1.694169 CCTCCCATAGCCCCACTGT 60.694 63.158 0.00 0.00 0.00 3.55
3123 3516 1.700042 CCTCCCATAGCCCCACTGTC 61.700 65.000 0.00 0.00 0.00 3.51
3124 3517 2.032860 CTCCCATAGCCCCACTGTCG 62.033 65.000 0.00 0.00 0.00 4.35
3125 3518 2.505982 CCATAGCCCCACTGTCGG 59.494 66.667 0.00 0.00 0.00 4.79
3126 3519 2.367202 CCATAGCCCCACTGTCGGT 61.367 63.158 0.00 0.00 0.00 4.69
3127 3520 1.153369 CATAGCCCCACTGTCGGTG 60.153 63.158 4.68 4.68 44.96 4.94
3128 3521 1.612442 ATAGCCCCACTGTCGGTGT 60.612 57.895 10.90 0.00 43.94 4.16
3129 3522 1.614241 ATAGCCCCACTGTCGGTGTC 61.614 60.000 10.90 0.21 43.94 3.67
3130 3523 3.936203 GCCCCACTGTCGGTGTCA 61.936 66.667 10.90 0.00 43.94 3.58
3131 3524 2.825982 CCCCACTGTCGGTGTCAA 59.174 61.111 10.90 0.00 43.94 3.18
3132 3525 1.147376 CCCCACTGTCGGTGTCAAA 59.853 57.895 10.90 0.00 43.94 2.69
3133 3526 0.464735 CCCCACTGTCGGTGTCAAAA 60.465 55.000 10.90 0.00 43.94 2.44
3134 3527 1.604604 CCCACTGTCGGTGTCAAAAT 58.395 50.000 10.90 0.00 43.94 1.82
3135 3528 1.535462 CCCACTGTCGGTGTCAAAATC 59.465 52.381 10.90 0.00 43.94 2.17
3136 3529 1.194547 CCACTGTCGGTGTCAAAATCG 59.805 52.381 10.90 0.00 43.94 3.34
3137 3530 1.194547 CACTGTCGGTGTCAAAATCGG 59.805 52.381 3.41 0.00 40.79 4.18
3138 3531 0.165944 CTGTCGGTGTCAAAATCGGC 59.834 55.000 0.00 0.00 0.00 5.54
3139 3532 1.131826 GTCGGTGTCAAAATCGGCG 59.868 57.895 0.00 0.00 0.00 6.46
3140 3533 2.030401 TCGGTGTCAAAATCGGCGG 61.030 57.895 7.21 0.00 0.00 6.13
3141 3534 2.030401 CGGTGTCAAAATCGGCGGA 61.030 57.895 7.21 0.00 0.00 5.54
3142 3535 1.366111 CGGTGTCAAAATCGGCGGAT 61.366 55.000 7.21 0.04 0.00 4.18
3143 3536 0.377203 GGTGTCAAAATCGGCGGATC 59.623 55.000 7.21 0.00 30.81 3.36
3144 3537 1.369625 GTGTCAAAATCGGCGGATCT 58.630 50.000 7.21 0.00 30.81 2.75
3145 3538 1.327764 GTGTCAAAATCGGCGGATCTC 59.672 52.381 7.21 0.00 30.81 2.75
3146 3539 0.577269 GTCAAAATCGGCGGATCTCG 59.423 55.000 7.21 0.00 42.76 4.04
3147 3540 0.529773 TCAAAATCGGCGGATCTCGG 60.530 55.000 7.21 0.00 39.69 4.63
3148 3541 1.227556 AAAATCGGCGGATCTCGGG 60.228 57.895 7.21 0.00 39.69 5.14
3149 3542 1.968050 AAAATCGGCGGATCTCGGGT 61.968 55.000 7.21 0.00 39.69 5.28
3150 3543 1.111116 AAATCGGCGGATCTCGGGTA 61.111 55.000 7.21 0.00 39.69 3.69
3151 3544 1.524863 AATCGGCGGATCTCGGGTAG 61.525 60.000 7.21 0.00 39.69 3.18
3152 3545 3.671411 CGGCGGATCTCGGGTAGG 61.671 72.222 0.00 0.00 39.69 3.18
3153 3546 3.303928 GGCGGATCTCGGGTAGGG 61.304 72.222 5.87 0.00 39.69 3.53
3154 3547 3.303928 GCGGATCTCGGGTAGGGG 61.304 72.222 5.87 0.00 39.69 4.79
3155 3548 2.600769 CGGATCTCGGGTAGGGGG 60.601 72.222 0.00 0.00 34.75 5.40
3156 3549 2.613421 GGATCTCGGGTAGGGGGT 59.387 66.667 0.00 0.00 0.00 4.95
3157 3550 1.533513 GGATCTCGGGTAGGGGGTC 60.534 68.421 0.00 0.00 0.00 4.46
3158 3551 1.533513 GATCTCGGGTAGGGGGTCC 60.534 68.421 0.00 0.00 0.00 4.46
3159 3552 3.097429 ATCTCGGGTAGGGGGTCCC 62.097 68.421 0.00 0.00 45.90 4.46
3168 3561 4.717313 GGGGGTCCCGAACTGTGC 62.717 72.222 0.48 0.00 36.85 4.57
3170 3563 4.309950 GGGTCCCGAACTGTGCGT 62.310 66.667 7.51 0.00 0.00 5.24
3171 3564 2.737376 GGTCCCGAACTGTGCGTC 60.737 66.667 7.51 0.00 0.00 5.19
3172 3565 2.338984 GTCCCGAACTGTGCGTCT 59.661 61.111 7.51 0.00 0.00 4.18
3173 3566 1.582968 GTCCCGAACTGTGCGTCTA 59.417 57.895 7.51 0.00 0.00 2.59
3174 3567 0.456312 GTCCCGAACTGTGCGTCTAG 60.456 60.000 7.51 0.00 0.00 2.43
3175 3568 1.153823 CCCGAACTGTGCGTCTAGG 60.154 63.158 7.51 0.00 0.00 3.02
3176 3569 1.805945 CCGAACTGTGCGTCTAGGC 60.806 63.158 7.51 0.00 0.00 3.93
3177 3570 2.152699 CGAACTGTGCGTCTAGGCG 61.153 63.158 13.55 13.55 35.06 5.52
3178 3571 1.805945 GAACTGTGCGTCTAGGCGG 60.806 63.158 19.86 3.85 35.06 6.13
3179 3572 2.209064 GAACTGTGCGTCTAGGCGGA 62.209 60.000 19.86 14.02 35.06 5.54
3180 3573 1.605058 AACTGTGCGTCTAGGCGGAT 61.605 55.000 19.86 0.00 34.24 4.18
3181 3574 1.589993 CTGTGCGTCTAGGCGGATG 60.590 63.158 19.86 9.25 34.24 3.51
3182 3575 2.279517 GTGCGTCTAGGCGGATGG 60.280 66.667 19.86 0.00 34.24 3.51
3183 3576 2.758327 TGCGTCTAGGCGGATGGT 60.758 61.111 19.86 0.00 35.06 3.55
3184 3577 1.454295 TGCGTCTAGGCGGATGGTA 60.454 57.895 19.86 0.00 35.06 3.25
3185 3578 1.038681 TGCGTCTAGGCGGATGGTAA 61.039 55.000 19.86 0.00 35.06 2.85
3186 3579 0.596859 GCGTCTAGGCGGATGGTAAC 60.597 60.000 19.86 0.00 0.00 2.50
3199 3592 2.409064 TGGTAACAGGAGACAAGGGA 57.591 50.000 0.00 0.00 46.17 4.20
3200 3593 1.975680 TGGTAACAGGAGACAAGGGAC 59.024 52.381 0.00 0.00 46.17 4.46
3201 3594 1.975680 GGTAACAGGAGACAAGGGACA 59.024 52.381 0.00 0.00 0.00 4.02
3202 3595 2.289506 GGTAACAGGAGACAAGGGACAC 60.290 54.545 0.00 0.00 0.00 3.67
3203 3596 0.393077 AACAGGAGACAAGGGACACG 59.607 55.000 0.00 0.00 0.00 4.49
3204 3597 0.469331 ACAGGAGACAAGGGACACGA 60.469 55.000 0.00 0.00 0.00 4.35
3205 3598 0.898320 CAGGAGACAAGGGACACGAT 59.102 55.000 0.00 0.00 0.00 3.73
3206 3599 0.898320 AGGAGACAAGGGACACGATG 59.102 55.000 0.00 0.00 0.00 3.84
3207 3600 0.608640 GGAGACAAGGGACACGATGT 59.391 55.000 0.00 0.00 0.00 3.06
3208 3601 1.002087 GGAGACAAGGGACACGATGTT 59.998 52.381 0.00 0.00 0.00 2.71
3209 3602 2.550208 GGAGACAAGGGACACGATGTTT 60.550 50.000 0.00 0.00 0.00 2.83
3210 3603 3.139077 GAGACAAGGGACACGATGTTTT 58.861 45.455 0.00 0.00 0.00 2.43
3211 3604 4.312443 GAGACAAGGGACACGATGTTTTA 58.688 43.478 0.00 0.00 0.00 1.52
3212 3605 4.062991 AGACAAGGGACACGATGTTTTAC 58.937 43.478 0.00 0.00 0.00 2.01
3213 3606 3.143728 ACAAGGGACACGATGTTTTACC 58.856 45.455 0.00 0.00 0.00 2.85
3214 3607 2.484742 AGGGACACGATGTTTTACCC 57.515 50.000 0.00 0.00 32.49 3.69
3215 3608 1.700739 AGGGACACGATGTTTTACCCA 59.299 47.619 0.00 0.00 34.20 4.51
3216 3609 2.081462 GGGACACGATGTTTTACCCAG 58.919 52.381 0.00 0.00 32.58 4.45
3217 3610 2.081462 GGACACGATGTTTTACCCAGG 58.919 52.381 0.00 0.00 0.00 4.45
3218 3611 2.551504 GGACACGATGTTTTACCCAGGT 60.552 50.000 0.00 0.00 0.00 4.00
3219 3612 3.143728 GACACGATGTTTTACCCAGGTT 58.856 45.455 0.00 0.00 0.00 3.50
3220 3613 3.558033 ACACGATGTTTTACCCAGGTTT 58.442 40.909 0.00 0.00 0.00 3.27
3221 3614 3.316868 ACACGATGTTTTACCCAGGTTTG 59.683 43.478 0.00 0.00 0.00 2.93
3222 3615 2.888414 ACGATGTTTTACCCAGGTTTGG 59.112 45.455 0.00 0.00 44.60 3.28
3230 3623 2.854076 CCAGGTTTGGGCCCTCTT 59.146 61.111 25.70 7.18 41.05 2.85
3231 3624 1.607467 CCAGGTTTGGGCCCTCTTG 60.607 63.158 25.70 18.43 41.05 3.02
3232 3625 1.460255 CAGGTTTGGGCCCTCTTGA 59.540 57.895 25.70 0.00 0.00 3.02
3233 3626 0.040204 CAGGTTTGGGCCCTCTTGAT 59.960 55.000 25.70 1.19 0.00 2.57
3234 3627 0.040204 AGGTTTGGGCCCTCTTGATG 59.960 55.000 25.70 0.00 0.00 3.07
3235 3628 0.972471 GGTTTGGGCCCTCTTGATGG 60.972 60.000 25.70 0.00 0.00 3.51
3236 3629 0.039618 GTTTGGGCCCTCTTGATGGA 59.960 55.000 25.70 0.00 0.00 3.41
3237 3630 0.332632 TTTGGGCCCTCTTGATGGAG 59.667 55.000 25.70 0.00 0.00 3.86
3246 3639 3.621558 CCTCTTGATGGAGGTAAAACCC 58.378 50.000 2.65 0.00 45.65 4.11
3247 3640 3.267031 CCTCTTGATGGAGGTAAAACCCT 59.733 47.826 2.65 0.00 45.65 4.34
3248 3641 4.473559 CCTCTTGATGGAGGTAAAACCCTA 59.526 45.833 2.65 0.00 45.65 3.53
3249 3642 5.429130 CTCTTGATGGAGGTAAAACCCTAC 58.571 45.833 0.00 0.00 39.75 3.18
3250 3643 3.899052 TGATGGAGGTAAAACCCTACG 57.101 47.619 0.00 0.00 38.41 3.51
3251 3644 3.175594 TGATGGAGGTAAAACCCTACGT 58.824 45.455 0.00 0.00 38.41 3.57
3252 3645 3.790091 GATGGAGGTAAAACCCTACGTC 58.210 50.000 0.00 0.00 42.79 4.34
3253 3646 2.680312 GGAGGTAAAACCCTACGTCC 57.320 55.000 0.00 6.71 44.94 4.79
3254 3647 2.182827 GGAGGTAAAACCCTACGTCCT 58.817 52.381 12.88 0.00 46.43 3.85
3255 3648 2.093816 GGAGGTAAAACCCTACGTCCTG 60.094 54.545 12.88 0.00 46.43 3.86
3256 3649 1.277273 AGGTAAAACCCTACGTCCTGC 59.723 52.381 0.00 0.00 39.75 4.85
3257 3650 1.277273 GGTAAAACCCTACGTCCTGCT 59.723 52.381 0.00 0.00 30.04 4.24
3258 3651 2.289882 GGTAAAACCCTACGTCCTGCTT 60.290 50.000 0.00 0.00 30.04 3.91
3259 3652 1.892209 AAAACCCTACGTCCTGCTTG 58.108 50.000 0.00 0.00 0.00 4.01
3260 3653 1.053424 AAACCCTACGTCCTGCTTGA 58.947 50.000 0.00 0.00 0.00 3.02
3261 3654 1.276622 AACCCTACGTCCTGCTTGAT 58.723 50.000 0.00 0.00 0.00 2.57
3262 3655 1.276622 ACCCTACGTCCTGCTTGATT 58.723 50.000 0.00 0.00 0.00 2.57
3263 3656 1.066143 ACCCTACGTCCTGCTTGATTG 60.066 52.381 0.00 0.00 0.00 2.67
3264 3657 1.207089 CCCTACGTCCTGCTTGATTGA 59.793 52.381 0.00 0.00 0.00 2.57
3265 3658 2.158900 CCCTACGTCCTGCTTGATTGAT 60.159 50.000 0.00 0.00 0.00 2.57
3266 3659 3.069586 CCCTACGTCCTGCTTGATTGATA 59.930 47.826 0.00 0.00 0.00 2.15
3267 3660 4.262635 CCCTACGTCCTGCTTGATTGATAT 60.263 45.833 0.00 0.00 0.00 1.63
3268 3661 5.300752 CCTACGTCCTGCTTGATTGATATT 58.699 41.667 0.00 0.00 0.00 1.28
3269 3662 5.178252 CCTACGTCCTGCTTGATTGATATTG 59.822 44.000 0.00 0.00 0.00 1.90
3270 3663 4.769688 ACGTCCTGCTTGATTGATATTGA 58.230 39.130 0.00 0.00 0.00 2.57
3271 3664 5.371526 ACGTCCTGCTTGATTGATATTGAT 58.628 37.500 0.00 0.00 0.00 2.57
3272 3665 6.524734 ACGTCCTGCTTGATTGATATTGATA 58.475 36.000 0.00 0.00 0.00 2.15
3273 3666 7.164122 ACGTCCTGCTTGATTGATATTGATAT 58.836 34.615 0.00 0.00 0.00 1.63
3274 3667 7.663081 ACGTCCTGCTTGATTGATATTGATATT 59.337 33.333 0.00 0.00 0.00 1.28
3275 3668 7.961283 CGTCCTGCTTGATTGATATTGATATTG 59.039 37.037 0.00 0.00 0.00 1.90
3276 3669 8.790718 GTCCTGCTTGATTGATATTGATATTGT 58.209 33.333 0.00 0.00 0.00 2.71
3277 3670 8.789762 TCCTGCTTGATTGATATTGATATTGTG 58.210 33.333 0.00 0.00 0.00 3.33
3278 3671 8.027189 CCTGCTTGATTGATATTGATATTGTGG 58.973 37.037 0.00 0.00 0.00 4.17
3279 3672 8.694581 TGCTTGATTGATATTGATATTGTGGA 57.305 30.769 0.00 0.00 0.00 4.02
3280 3673 9.304335 TGCTTGATTGATATTGATATTGTGGAT 57.696 29.630 0.00 0.00 0.00 3.41
3281 3674 9.569167 GCTTGATTGATATTGATATTGTGGATG 57.431 33.333 0.00 0.00 0.00 3.51
3292 3685 8.862325 TTGATATTGTGGATGTTTACAAGAGT 57.138 30.769 0.00 0.00 39.83 3.24
3293 3686 8.267620 TGATATTGTGGATGTTTACAAGAGTG 57.732 34.615 0.00 0.00 39.83 3.51
3294 3687 5.964958 ATTGTGGATGTTTACAAGAGTGG 57.035 39.130 0.00 0.00 39.83 4.00
3295 3688 4.698201 TGTGGATGTTTACAAGAGTGGA 57.302 40.909 0.00 0.00 0.00 4.02
3296 3689 5.241403 TGTGGATGTTTACAAGAGTGGAT 57.759 39.130 0.00 0.00 0.00 3.41
3297 3690 5.245531 TGTGGATGTTTACAAGAGTGGATC 58.754 41.667 0.00 0.00 0.00 3.36
3298 3691 5.013079 TGTGGATGTTTACAAGAGTGGATCT 59.987 40.000 0.00 0.00 41.27 2.75
3299 3692 6.212589 TGTGGATGTTTACAAGAGTGGATCTA 59.787 38.462 0.00 0.00 37.23 1.98
3300 3693 6.535508 GTGGATGTTTACAAGAGTGGATCTAC 59.464 42.308 0.00 0.00 37.23 2.59
3301 3694 6.049790 GGATGTTTACAAGAGTGGATCTACC 58.950 44.000 5.47 0.00 37.23 3.18
3316 3709 2.656002 TCTACCACGAGATCAAGGAGG 58.344 52.381 0.00 0.00 0.00 4.30
3317 3710 1.067821 CTACCACGAGATCAAGGAGGC 59.932 57.143 0.00 0.00 0.00 4.70
3318 3711 0.616111 ACCACGAGATCAAGGAGGCT 60.616 55.000 0.00 0.00 0.00 4.58
3319 3712 1.342076 ACCACGAGATCAAGGAGGCTA 60.342 52.381 0.00 0.00 0.00 3.93
3320 3713 1.757118 CCACGAGATCAAGGAGGCTAA 59.243 52.381 0.00 0.00 0.00 3.09
3321 3714 2.168521 CCACGAGATCAAGGAGGCTAAA 59.831 50.000 0.00 0.00 0.00 1.85
3322 3715 3.190874 CACGAGATCAAGGAGGCTAAAC 58.809 50.000 0.00 0.00 0.00 2.01
3323 3716 2.168728 ACGAGATCAAGGAGGCTAAACC 59.831 50.000 0.00 0.00 39.61 3.27
3324 3717 2.483889 CGAGATCAAGGAGGCTAAACCC 60.484 54.545 0.00 0.00 40.58 4.11
3325 3718 2.774809 GAGATCAAGGAGGCTAAACCCT 59.225 50.000 0.00 0.00 40.58 4.34
3326 3719 3.967987 GAGATCAAGGAGGCTAAACCCTA 59.032 47.826 0.00 0.00 40.58 3.53
3327 3720 3.970640 AGATCAAGGAGGCTAAACCCTAG 59.029 47.826 0.00 0.00 40.58 3.02
3328 3721 3.484953 TCAAGGAGGCTAAACCCTAGA 57.515 47.619 0.00 0.00 40.58 2.43
3329 3722 3.798515 TCAAGGAGGCTAAACCCTAGAA 58.201 45.455 0.00 0.00 40.58 2.10
3330 3723 3.775316 TCAAGGAGGCTAAACCCTAGAAG 59.225 47.826 0.00 0.00 40.58 2.85
3331 3724 2.120312 AGGAGGCTAAACCCTAGAAGC 58.880 52.381 0.00 0.00 40.58 3.86
3332 3725 2.120312 GGAGGCTAAACCCTAGAAGCT 58.880 52.381 0.00 0.00 40.58 3.74
3333 3726 3.052033 AGGAGGCTAAACCCTAGAAGCTA 60.052 47.826 0.00 0.00 40.58 3.32
3334 3727 3.322541 GGAGGCTAAACCCTAGAAGCTAG 59.677 52.174 0.00 0.00 40.58 3.42
3335 3728 2.701423 AGGCTAAACCCTAGAAGCTAGC 59.299 50.000 6.62 6.62 40.58 3.42
3336 3729 2.224329 GGCTAAACCCTAGAAGCTAGCC 60.224 54.545 12.13 13.65 43.27 3.93
3337 3730 2.701423 GCTAAACCCTAGAAGCTAGCCT 59.299 50.000 12.13 4.79 32.18 4.58
3338 3731 3.896272 GCTAAACCCTAGAAGCTAGCCTA 59.104 47.826 12.13 5.82 32.18 3.93
3339 3732 4.528987 GCTAAACCCTAGAAGCTAGCCTAT 59.471 45.833 12.13 0.00 32.18 2.57
3340 3733 4.965200 AAACCCTAGAAGCTAGCCTATG 57.035 45.455 12.13 3.90 0.00 2.23
3341 3734 2.896039 ACCCTAGAAGCTAGCCTATGG 58.104 52.381 12.13 14.55 0.00 2.74
3342 3735 2.180308 ACCCTAGAAGCTAGCCTATGGT 59.820 50.000 12.13 15.16 31.76 3.55
3343 3736 3.401683 ACCCTAGAAGCTAGCCTATGGTA 59.598 47.826 19.36 2.73 33.87 3.25
3344 3737 4.046103 ACCCTAGAAGCTAGCCTATGGTAT 59.954 45.833 19.36 4.05 33.87 2.73
3345 3738 4.404073 CCCTAGAAGCTAGCCTATGGTATG 59.596 50.000 12.13 0.00 0.00 2.39
3346 3739 5.265191 CCTAGAAGCTAGCCTATGGTATGA 58.735 45.833 12.13 0.00 0.00 2.15
3347 3740 5.896678 CCTAGAAGCTAGCCTATGGTATGAT 59.103 44.000 12.13 0.00 0.00 2.45
3348 3741 6.382570 CCTAGAAGCTAGCCTATGGTATGATT 59.617 42.308 12.13 0.00 0.00 2.57
3349 3742 6.047511 AGAAGCTAGCCTATGGTATGATTG 57.952 41.667 12.13 0.00 0.00 2.67
3350 3743 5.545723 AGAAGCTAGCCTATGGTATGATTGT 59.454 40.000 12.13 0.00 0.00 2.71
3351 3744 6.726299 AGAAGCTAGCCTATGGTATGATTGTA 59.274 38.462 12.13 0.00 0.00 2.41
3352 3745 6.935240 AGCTAGCCTATGGTATGATTGTAA 57.065 37.500 12.13 0.00 0.00 2.41
3353 3746 7.502060 AGCTAGCCTATGGTATGATTGTAAT 57.498 36.000 12.13 0.00 0.00 1.89
3354 3747 7.334090 AGCTAGCCTATGGTATGATTGTAATG 58.666 38.462 12.13 0.00 0.00 1.90
3355 3748 6.540189 GCTAGCCTATGGTATGATTGTAATGG 59.460 42.308 2.29 0.00 0.00 3.16
3356 3749 6.454223 AGCCTATGGTATGATTGTAATGGT 57.546 37.500 0.00 0.00 0.00 3.55
3357 3750 6.852404 AGCCTATGGTATGATTGTAATGGTT 58.148 36.000 0.00 0.00 0.00 3.67
3358 3751 6.716628 AGCCTATGGTATGATTGTAATGGTTG 59.283 38.462 0.00 0.00 0.00 3.77
3359 3752 6.490040 GCCTATGGTATGATTGTAATGGTTGT 59.510 38.462 0.00 0.00 0.00 3.32
3360 3753 7.014230 GCCTATGGTATGATTGTAATGGTTGTT 59.986 37.037 0.00 0.00 0.00 2.83
3361 3754 8.352201 CCTATGGTATGATTGTAATGGTTGTTG 58.648 37.037 0.00 0.00 0.00 3.33
3362 3755 7.716799 ATGGTATGATTGTAATGGTTGTTGT 57.283 32.000 0.00 0.00 0.00 3.32
3363 3756 7.531857 TGGTATGATTGTAATGGTTGTTGTT 57.468 32.000 0.00 0.00 0.00 2.83
3364 3757 7.374272 TGGTATGATTGTAATGGTTGTTGTTG 58.626 34.615 0.00 0.00 0.00 3.33
3365 3758 7.014711 TGGTATGATTGTAATGGTTGTTGTTGT 59.985 33.333 0.00 0.00 0.00 3.32
3366 3759 7.328249 GGTATGATTGTAATGGTTGTTGTTGTG 59.672 37.037 0.00 0.00 0.00 3.33
3367 3760 6.214191 TGATTGTAATGGTTGTTGTTGTGT 57.786 33.333 0.00 0.00 0.00 3.72
3368 3761 6.269315 TGATTGTAATGGTTGTTGTTGTGTC 58.731 36.000 0.00 0.00 0.00 3.67
3369 3762 4.640789 TGTAATGGTTGTTGTTGTGTCC 57.359 40.909 0.00 0.00 0.00 4.02
3370 3763 4.274147 TGTAATGGTTGTTGTTGTGTCCT 58.726 39.130 0.00 0.00 0.00 3.85
3371 3764 5.437946 TGTAATGGTTGTTGTTGTGTCCTA 58.562 37.500 0.00 0.00 0.00 2.94
3372 3765 4.911514 AATGGTTGTTGTTGTGTCCTAC 57.088 40.909 0.00 0.00 0.00 3.18
3373 3766 2.281517 TGGTTGTTGTTGTGTCCTACG 58.718 47.619 0.00 0.00 0.00 3.51
3374 3767 1.600485 GGTTGTTGTTGTGTCCTACGG 59.400 52.381 0.00 0.00 0.00 4.02
3375 3768 2.553086 GTTGTTGTTGTGTCCTACGGA 58.447 47.619 0.00 0.00 0.00 4.69
3386 3779 2.273538 TCCTACGGACTAGAGCCATC 57.726 55.000 0.00 0.00 0.00 3.51
3387 3780 1.202903 TCCTACGGACTAGAGCCATCC 60.203 57.143 0.00 0.00 0.00 3.51
3390 3783 4.279326 GGACTAGAGCCATCCGGT 57.721 61.111 0.00 0.00 33.28 5.28
3391 3784 2.517609 GGACTAGAGCCATCCGGTT 58.482 57.895 0.00 0.00 33.28 4.44
3392 3785 0.831307 GGACTAGAGCCATCCGGTTT 59.169 55.000 0.00 0.00 33.28 3.27
3393 3786 2.037144 GGACTAGAGCCATCCGGTTTA 58.963 52.381 0.00 0.00 33.28 2.01
3394 3787 2.633481 GGACTAGAGCCATCCGGTTTAT 59.367 50.000 0.00 0.00 33.28 1.40
3395 3788 3.830755 GGACTAGAGCCATCCGGTTTATA 59.169 47.826 0.00 0.00 33.28 0.98
3396 3789 4.466726 GGACTAGAGCCATCCGGTTTATAT 59.533 45.833 0.00 0.00 33.28 0.86
3397 3790 5.655532 GGACTAGAGCCATCCGGTTTATATA 59.344 44.000 0.00 0.00 33.28 0.86
3398 3791 6.183360 GGACTAGAGCCATCCGGTTTATATAG 60.183 46.154 0.00 0.17 33.28 1.31
3399 3792 6.491383 ACTAGAGCCATCCGGTTTATATAGA 58.509 40.000 0.00 0.00 33.28 1.98
3400 3793 5.662674 AGAGCCATCCGGTTTATATAGAC 57.337 43.478 0.00 0.00 33.28 2.59
3401 3794 5.084519 AGAGCCATCCGGTTTATATAGACA 58.915 41.667 0.00 0.00 33.28 3.41
3402 3795 5.047235 AGAGCCATCCGGTTTATATAGACAC 60.047 44.000 0.00 0.00 33.28 3.67
3403 3796 4.020485 AGCCATCCGGTTTATATAGACACC 60.020 45.833 0.00 2.59 33.28 4.16
3409 3802 5.044428 CGGTTTATATAGACACCGGAGAG 57.956 47.826 15.65 0.00 46.92 3.20
3410 3803 4.082895 CGGTTTATATAGACACCGGAGAGG 60.083 50.000 15.65 0.00 46.92 3.69
3411 3804 4.220163 GGTTTATATAGACACCGGAGAGGG 59.780 50.000 9.46 0.00 46.96 4.30
3412 3805 1.926108 ATATAGACACCGGAGAGGGC 58.074 55.000 9.46 0.00 46.96 5.19
3413 3806 0.851469 TATAGACACCGGAGAGGGCT 59.149 55.000 9.46 4.41 46.96 5.19
3414 3807 0.851469 ATAGACACCGGAGAGGGCTA 59.149 55.000 9.46 6.85 46.96 3.93
3415 3808 0.183014 TAGACACCGGAGAGGGCTAG 59.817 60.000 9.46 0.00 46.96 3.42
3416 3809 2.042843 ACACCGGAGAGGGCTAGG 60.043 66.667 9.46 0.00 46.96 3.02
3417 3810 2.840102 CACCGGAGAGGGCTAGGG 60.840 72.222 9.46 0.00 46.96 3.53
3418 3811 3.357082 ACCGGAGAGGGCTAGGGT 61.357 66.667 9.46 0.00 46.96 4.34
3419 3812 2.041819 CCGGAGAGGGCTAGGGTT 60.042 66.667 0.00 0.00 35.97 4.11
3420 3813 1.232216 CCGGAGAGGGCTAGGGTTA 59.768 63.158 0.00 0.00 35.97 2.85
3421 3814 1.114119 CCGGAGAGGGCTAGGGTTAC 61.114 65.000 0.00 0.00 35.97 2.50
3422 3815 0.396695 CGGAGAGGGCTAGGGTTACA 60.397 60.000 0.00 0.00 0.00 2.41
3423 3816 1.758123 CGGAGAGGGCTAGGGTTACAT 60.758 57.143 0.00 0.00 0.00 2.29
3424 3817 2.490351 CGGAGAGGGCTAGGGTTACATA 60.490 54.545 0.00 0.00 0.00 2.29
3425 3818 3.166679 GGAGAGGGCTAGGGTTACATAG 58.833 54.545 0.00 0.00 0.00 2.23
3426 3819 3.181420 GGAGAGGGCTAGGGTTACATAGA 60.181 52.174 0.00 0.00 0.00 1.98
3427 3820 4.083565 GAGAGGGCTAGGGTTACATAGAG 58.916 52.174 0.00 0.00 0.00 2.43
3428 3821 3.467863 AGAGGGCTAGGGTTACATAGAGT 59.532 47.826 0.00 0.00 0.00 3.24
3429 3822 3.827876 GAGGGCTAGGGTTACATAGAGTC 59.172 52.174 0.00 0.00 0.00 3.36
3430 3823 2.557490 GGGCTAGGGTTACATAGAGTCG 59.443 54.545 0.00 0.00 0.00 4.18
3431 3824 2.557490 GGCTAGGGTTACATAGAGTCGG 59.443 54.545 0.00 0.00 0.00 4.79
3432 3825 3.220940 GCTAGGGTTACATAGAGTCGGT 58.779 50.000 0.00 0.00 0.00 4.69
3433 3826 3.635836 GCTAGGGTTACATAGAGTCGGTT 59.364 47.826 0.00 0.00 0.00 4.44
3434 3827 4.823989 GCTAGGGTTACATAGAGTCGGTTA 59.176 45.833 0.00 0.00 0.00 2.85
3435 3828 5.278218 GCTAGGGTTACATAGAGTCGGTTAC 60.278 48.000 0.00 0.00 0.00 2.50
3436 3829 4.603131 AGGGTTACATAGAGTCGGTTACA 58.397 43.478 4.88 0.00 0.00 2.41
3437 3830 5.018809 AGGGTTACATAGAGTCGGTTACAA 58.981 41.667 4.88 0.00 0.00 2.41
3438 3831 5.659971 AGGGTTACATAGAGTCGGTTACAAT 59.340 40.000 4.88 0.00 0.00 2.71
3439 3832 5.751990 GGGTTACATAGAGTCGGTTACAATG 59.248 44.000 4.88 0.00 0.00 2.82
3440 3833 5.751990 GGTTACATAGAGTCGGTTACAATGG 59.248 44.000 4.88 0.00 0.00 3.16
3441 3834 6.335777 GTTACATAGAGTCGGTTACAATGGT 58.664 40.000 0.00 0.00 0.00 3.55
3442 3835 7.416664 GGTTACATAGAGTCGGTTACAATGGTA 60.417 40.741 4.88 0.00 0.00 3.25
3443 3836 6.145338 ACATAGAGTCGGTTACAATGGTAG 57.855 41.667 0.00 0.00 0.00 3.18
3444 3837 5.068723 ACATAGAGTCGGTTACAATGGTAGG 59.931 44.000 0.00 0.00 0.00 3.18
3445 3838 3.705051 AGAGTCGGTTACAATGGTAGGA 58.295 45.455 0.00 0.00 0.00 2.94
3446 3839 3.700038 AGAGTCGGTTACAATGGTAGGAG 59.300 47.826 0.00 0.00 0.00 3.69
3447 3840 3.698040 GAGTCGGTTACAATGGTAGGAGA 59.302 47.826 0.00 0.00 0.00 3.71
3448 3841 4.287552 AGTCGGTTACAATGGTAGGAGAT 58.712 43.478 0.00 0.00 0.00 2.75
3449 3842 4.341520 AGTCGGTTACAATGGTAGGAGATC 59.658 45.833 0.00 0.00 0.00 2.75
3450 3843 4.341520 GTCGGTTACAATGGTAGGAGATCT 59.658 45.833 0.00 0.00 0.00 2.75
3451 3844 5.533903 GTCGGTTACAATGGTAGGAGATCTA 59.466 44.000 0.00 0.00 0.00 1.98
3452 3845 5.533903 TCGGTTACAATGGTAGGAGATCTAC 59.466 44.000 0.00 0.00 45.78 2.59
3470 3863 2.431539 CGTATCCGTATCGCCAAGC 58.568 57.895 0.00 0.00 0.00 4.01
3471 3864 0.039437 CGTATCCGTATCGCCAAGCT 60.039 55.000 0.00 0.00 0.00 3.74
3472 3865 1.602165 CGTATCCGTATCGCCAAGCTT 60.602 52.381 0.00 0.00 0.00 3.74
3473 3866 1.792949 GTATCCGTATCGCCAAGCTTG 59.207 52.381 19.93 19.93 0.00 4.01
3474 3867 1.160329 ATCCGTATCGCCAAGCTTGC 61.160 55.000 21.43 14.85 0.00 4.01
3475 3868 2.709475 CGTATCGCCAAGCTTGCC 59.291 61.111 21.43 9.45 0.00 4.52
3476 3869 1.815421 CGTATCGCCAAGCTTGCCT 60.815 57.895 21.43 7.17 0.00 4.75
3477 3870 1.369091 CGTATCGCCAAGCTTGCCTT 61.369 55.000 21.43 7.68 0.00 4.35
3478 3871 0.378610 GTATCGCCAAGCTTGCCTTC 59.621 55.000 21.43 8.32 0.00 3.46
3479 3872 0.748005 TATCGCCAAGCTTGCCTTCC 60.748 55.000 21.43 5.26 0.00 3.46
3480 3873 2.769652 ATCGCCAAGCTTGCCTTCCA 62.770 55.000 21.43 1.33 0.00 3.53
3481 3874 2.653115 GCCAAGCTTGCCTTCCAC 59.347 61.111 21.43 0.12 0.00 4.02
3482 3875 2.956987 CCAAGCTTGCCTTCCACG 59.043 61.111 21.43 0.62 0.00 4.94
3483 3876 2.256461 CAAGCTTGCCTTCCACGC 59.744 61.111 14.65 0.00 38.87 5.34
3484 3877 2.985847 AAGCTTGCCTTCCACGCC 60.986 61.111 0.00 0.00 39.36 5.68
3485 3878 3.790416 AAGCTTGCCTTCCACGCCA 62.790 57.895 0.00 0.00 39.36 5.69
3486 3879 3.294493 GCTTGCCTTCCACGCCAA 61.294 61.111 0.00 0.00 32.93 4.52
3487 3880 2.956987 CTTGCCTTCCACGCCAAG 59.043 61.111 0.00 0.00 0.00 3.61
3488 3881 2.597217 TTGCCTTCCACGCCAAGG 60.597 61.111 3.73 3.73 43.13 3.61
3489 3882 3.126703 TTGCCTTCCACGCCAAGGA 62.127 57.895 10.97 0.00 42.94 3.36
3490 3883 2.282180 GCCTTCCACGCCAAGGAA 60.282 61.111 10.97 5.63 42.94 3.36
3491 3884 1.901464 GCCTTCCACGCCAAGGAAA 60.901 57.895 10.97 0.00 44.07 3.13
3492 3885 1.866853 GCCTTCCACGCCAAGGAAAG 61.867 60.000 10.97 2.24 44.07 2.62
3493 3886 0.537371 CCTTCCACGCCAAGGAAAGT 60.537 55.000 2.12 0.00 44.07 2.66
3494 3887 0.875059 CTTCCACGCCAAGGAAAGTC 59.125 55.000 0.00 0.00 44.07 3.01
3495 3888 0.536460 TTCCACGCCAAGGAAAGTCC 60.536 55.000 0.00 0.00 41.94 3.85
3496 3889 1.971695 CCACGCCAAGGAAAGTCCC 60.972 63.158 0.00 0.00 37.19 4.46
3497 3890 1.228124 CACGCCAAGGAAAGTCCCA 60.228 57.895 0.00 0.00 37.19 4.37
3498 3891 0.609131 CACGCCAAGGAAAGTCCCAT 60.609 55.000 0.00 0.00 37.19 4.00
3499 3892 0.322546 ACGCCAAGGAAAGTCCCATC 60.323 55.000 0.00 0.00 37.19 3.51
3500 3893 1.032114 CGCCAAGGAAAGTCCCATCC 61.032 60.000 0.00 0.00 37.19 3.51
3501 3894 1.032114 GCCAAGGAAAGTCCCATCCG 61.032 60.000 0.00 0.00 40.78 4.18
3502 3895 0.394352 CCAAGGAAAGTCCCATCCGG 60.394 60.000 0.00 0.00 40.78 5.14
3503 3896 0.618458 CAAGGAAAGTCCCATCCGGA 59.382 55.000 6.61 6.61 40.78 5.14
3534 3927 7.820044 ACGAAGTCTTCAATCTTGTATCTTC 57.180 36.000 12.99 0.00 29.74 2.87
3535 3928 7.378966 ACGAAGTCTTCAATCTTGTATCTTCA 58.621 34.615 12.99 0.00 29.74 3.02
3536 3929 8.037758 ACGAAGTCTTCAATCTTGTATCTTCAT 58.962 33.333 12.99 0.00 29.74 2.57
3537 3930 9.521503 CGAAGTCTTCAATCTTGTATCTTCATA 57.478 33.333 12.99 0.00 32.10 2.15
3544 3937 9.605275 TTCAATCTTGTATCTTCATAGTCTTGG 57.395 33.333 0.00 0.00 0.00 3.61
3545 3938 8.981659 TCAATCTTGTATCTTCATAGTCTTGGA 58.018 33.333 0.00 0.00 0.00 3.53
3546 3939 9.258826 CAATCTTGTATCTTCATAGTCTTGGAG 57.741 37.037 0.00 0.00 0.00 3.86
3547 3940 7.962995 TCTTGTATCTTCATAGTCTTGGAGT 57.037 36.000 0.00 0.00 0.00 3.85
3548 3941 8.001881 TCTTGTATCTTCATAGTCTTGGAGTC 57.998 38.462 0.00 0.00 0.00 3.36
3549 3942 6.716934 TGTATCTTCATAGTCTTGGAGTCC 57.283 41.667 0.73 0.73 0.00 3.85
3550 3943 4.927978 ATCTTCATAGTCTTGGAGTCCG 57.072 45.455 4.30 0.00 0.00 4.79
3551 3944 3.024547 TCTTCATAGTCTTGGAGTCCGG 58.975 50.000 4.30 0.00 0.00 5.14
3552 3945 2.526888 TCATAGTCTTGGAGTCCGGT 57.473 50.000 4.30 0.00 0.00 5.28
3553 3946 2.376109 TCATAGTCTTGGAGTCCGGTC 58.624 52.381 4.30 0.00 0.00 4.79
3554 3947 1.065701 CATAGTCTTGGAGTCCGGTCG 59.934 57.143 4.30 0.00 0.00 4.79
3555 3948 0.325933 TAGTCTTGGAGTCCGGTCGA 59.674 55.000 4.30 0.00 0.00 4.20
3556 3949 0.323542 AGTCTTGGAGTCCGGTCGAT 60.324 55.000 4.30 0.00 0.00 3.59
3557 3950 0.179134 GTCTTGGAGTCCGGTCGATG 60.179 60.000 4.30 0.00 0.00 3.84
3558 3951 0.323087 TCTTGGAGTCCGGTCGATGA 60.323 55.000 4.30 0.00 0.00 2.92
3559 3952 0.747255 CTTGGAGTCCGGTCGATGAT 59.253 55.000 4.30 0.00 0.00 2.45
3560 3953 0.459899 TTGGAGTCCGGTCGATGATG 59.540 55.000 4.30 0.00 0.00 3.07
3561 3954 0.395173 TGGAGTCCGGTCGATGATGA 60.395 55.000 4.30 0.00 0.00 2.92
3562 3955 0.962489 GGAGTCCGGTCGATGATGAT 59.038 55.000 0.00 0.00 0.00 2.45
3563 3956 2.160205 GGAGTCCGGTCGATGATGATA 58.840 52.381 0.00 0.00 0.00 2.15
3564 3957 2.162608 GGAGTCCGGTCGATGATGATAG 59.837 54.545 0.00 0.00 0.00 2.08
3565 3958 2.814919 GAGTCCGGTCGATGATGATAGT 59.185 50.000 0.00 0.00 0.00 2.12
3566 3959 2.814919 AGTCCGGTCGATGATGATAGTC 59.185 50.000 0.00 0.00 0.00 2.59
3567 3960 2.095161 GTCCGGTCGATGATGATAGTCC 60.095 54.545 0.00 0.00 0.00 3.85
3568 3961 1.135660 CCGGTCGATGATGATAGTCCG 60.136 57.143 4.35 4.35 36.27 4.79
3569 3962 1.135660 CGGTCGATGATGATAGTCCGG 60.136 57.143 0.00 0.00 34.09 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 84 2.356695 GACTACGGCTTTTTGTGGTGTT 59.643 45.455 0.00 0.00 29.32 3.32
99 100 3.805207 AGGGTTTAATGGCGATGACTAC 58.195 45.455 0.00 0.00 0.00 2.73
153 154 0.179148 TGTGCATACGCGAAGACGAT 60.179 50.000 15.93 0.00 42.97 3.73
197 198 0.628522 AGAGTCCTGCTAGCTCCTCA 59.371 55.000 17.23 0.00 0.00 3.86
204 205 0.814410 TCGGCGTAGAGTCCTGCTAG 60.814 60.000 6.85 0.00 0.00 3.42
219 220 1.664151 CGGATTAAACAGACCTTCGGC 59.336 52.381 0.00 0.00 0.00 5.54
231 232 3.940319 TCGTTCATTGGGACGGATTAAA 58.060 40.909 11.61 0.00 0.00 1.52
239 240 3.058224 CCTTCAAGTTCGTTCATTGGGAC 60.058 47.826 0.00 0.00 0.00 4.46
241 242 3.146066 TCCTTCAAGTTCGTTCATTGGG 58.854 45.455 0.00 0.00 0.00 4.12
244 245 4.351874 TCCTCCTTCAAGTTCGTTCATT 57.648 40.909 0.00 0.00 0.00 2.57
317 320 2.540101 GGTTTTAGTCCTCGCATGATCG 59.460 50.000 0.00 0.00 0.00 3.69
322 325 4.163458 TGATTAGGGTTTTAGTCCTCGCAT 59.837 41.667 0.00 0.00 34.75 4.73
394 397 1.100463 TTCTGCTTGCCGCTTTGACA 61.100 50.000 0.00 0.00 40.11 3.58
395 398 0.386478 CTTCTGCTTGCCGCTTTGAC 60.386 55.000 0.00 0.00 40.11 3.18
399 402 2.490270 ATCCCTTCTGCTTGCCGCTT 62.490 55.000 0.00 0.00 40.11 4.68
409 412 1.363744 GTGAACTCGCATCCCTTCTG 58.636 55.000 0.00 0.00 0.00 3.02
423 426 3.723348 GCAACCGAGCCCGTGAAC 61.723 66.667 0.00 0.00 0.00 3.18
428 431 4.069232 TCTCTGCAACCGAGCCCG 62.069 66.667 0.00 0.00 0.00 6.13
429 432 2.435059 GTCTCTGCAACCGAGCCC 60.435 66.667 0.00 0.00 0.00 5.19
438 441 2.363018 CTCCCCTCCGTCTCTGCA 60.363 66.667 0.00 0.00 0.00 4.41
441 444 1.308326 CTTCCTCCCCTCCGTCTCT 59.692 63.158 0.00 0.00 0.00 3.10
442 445 1.758906 CCTTCCTCCCCTCCGTCTC 60.759 68.421 0.00 0.00 0.00 3.36
447 450 3.002371 CAAGCCTTCCTCCCCTCC 58.998 66.667 0.00 0.00 0.00 4.30
464 467 1.470098 CTGGCACAAAGTGACTATGGC 59.530 52.381 4.45 9.95 42.96 4.40
482 485 6.326583 TCATTTACAGACTATACCTTCCCCTG 59.673 42.308 0.00 0.00 0.00 4.45
511 514 7.077605 CACAGCTCGAAATGAAGTTGAATTTA 58.922 34.615 3.69 0.00 0.00 1.40
542 545 1.337823 GGCGTGTCAGTTACATGGTCT 60.338 52.381 0.00 0.00 44.08 3.85
550 553 0.108992 GACCATCGGCGTGTCAGTTA 60.109 55.000 6.85 0.00 0.00 2.24
574 577 8.986847 AGAATCACTCGAAAGCAAGATATTATG 58.013 33.333 0.00 0.00 0.00 1.90
591 597 4.478206 TGACCAATGGAGAGAATCACTC 57.522 45.455 6.16 0.00 45.22 3.51
595 601 4.202398 TGCCTATGACCAATGGAGAGAATC 60.202 45.833 6.16 0.00 0.00 2.52
596 602 3.718434 TGCCTATGACCAATGGAGAGAAT 59.282 43.478 6.16 0.00 0.00 2.40
597 603 3.114606 TGCCTATGACCAATGGAGAGAA 58.885 45.455 6.16 0.00 0.00 2.87
598 604 2.435805 GTGCCTATGACCAATGGAGAGA 59.564 50.000 6.16 0.00 0.00 3.10
599 605 2.804572 CGTGCCTATGACCAATGGAGAG 60.805 54.545 6.16 0.00 0.00 3.20
600 606 1.138859 CGTGCCTATGACCAATGGAGA 59.861 52.381 6.16 0.00 0.00 3.71
601 607 1.586422 CGTGCCTATGACCAATGGAG 58.414 55.000 6.16 0.00 0.00 3.86
602 608 0.180171 CCGTGCCTATGACCAATGGA 59.820 55.000 6.16 0.00 0.00 3.41
603 609 0.107214 ACCGTGCCTATGACCAATGG 60.107 55.000 0.00 0.00 0.00 3.16
604 610 1.401552 CAACCGTGCCTATGACCAATG 59.598 52.381 0.00 0.00 0.00 2.82
605 611 1.750193 CAACCGTGCCTATGACCAAT 58.250 50.000 0.00 0.00 0.00 3.16
606 612 0.958382 GCAACCGTGCCTATGACCAA 60.958 55.000 0.00 0.00 45.68 3.67
607 613 1.376683 GCAACCGTGCCTATGACCA 60.377 57.895 0.00 0.00 45.68 4.02
608 614 3.497879 GCAACCGTGCCTATGACC 58.502 61.111 0.00 0.00 45.68 4.02
617 623 1.016130 AGAGAATCGCAGCAACCGTG 61.016 55.000 0.00 0.00 42.67 4.94
618 624 0.737715 GAGAGAATCGCAGCAACCGT 60.738 55.000 0.00 0.00 42.67 4.83
619 625 1.424493 GGAGAGAATCGCAGCAACCG 61.424 60.000 0.00 0.00 42.67 4.44
620 626 0.391661 TGGAGAGAATCGCAGCAACC 60.392 55.000 0.00 0.00 42.67 3.77
621 627 1.661341 ATGGAGAGAATCGCAGCAAC 58.339 50.000 0.00 0.00 42.67 4.17
622 628 2.011947 CAATGGAGAGAATCGCAGCAA 58.988 47.619 0.00 0.00 42.67 3.91
623 629 1.065926 ACAATGGAGAGAATCGCAGCA 60.066 47.619 0.00 0.00 42.67 4.41
624 630 1.596727 GACAATGGAGAGAATCGCAGC 59.403 52.381 0.00 0.00 42.67 5.25
625 631 2.897436 TGACAATGGAGAGAATCGCAG 58.103 47.619 0.00 0.00 42.67 5.18
626 632 3.548745 ATGACAATGGAGAGAATCGCA 57.451 42.857 0.00 0.00 42.67 5.10
627 633 3.993081 CCTATGACAATGGAGAGAATCGC 59.007 47.826 0.00 0.00 42.67 4.58
628 634 3.993081 GCCTATGACAATGGAGAGAATCG 59.007 47.826 1.76 0.00 42.67 3.34
695 707 1.667236 TTCTTGACACACACTGCTGG 58.333 50.000 0.00 0.00 0.00 4.85
826 841 8.986991 ACTTATTTCTGGAGTATGACTTGAGAT 58.013 33.333 0.00 0.00 0.00 2.75
883 898 3.067742 ACGAGCAGTGTGTAGTTACAAGT 59.932 43.478 0.00 0.00 38.04 3.16
886 901 2.882761 AGACGAGCAGTGTGTAGTTACA 59.117 45.455 0.00 0.00 0.00 2.41
893 911 2.604046 AAGAAAGACGAGCAGTGTGT 57.396 45.000 0.00 0.00 0.00 3.72
970 996 0.179121 TACCGTATGCCGCTTCAGTG 60.179 55.000 0.00 0.00 34.38 3.66
992 1018 3.181967 GCGCGTGCATCGTCTTCT 61.182 61.111 17.66 0.00 42.15 2.85
1350 1376 2.892425 CGGTTGGCCTGCGAGATC 60.892 66.667 3.32 0.00 0.00 2.75
1906 1932 0.827368 AAGATGGAGACCTCGAAGGC 59.173 55.000 1.36 0.00 39.63 4.35
2041 2067 1.400142 CCGATGCTGGCACGAATTAAA 59.600 47.619 15.07 0.00 0.00 1.52
2044 2070 0.960364 AACCGATGCTGGCACGAATT 60.960 50.000 15.07 8.83 0.00 2.17
2055 2081 3.395669 GGCGTGTAGAACCGATGC 58.604 61.111 0.00 0.00 0.00 3.91
2070 2096 0.944386 TCACTGTGAAAAAGAGCGGC 59.056 50.000 8.27 0.00 0.00 6.53
2443 2469 4.343814 AGAAGCATAGGAGTAGGAAGAAGC 59.656 45.833 0.00 0.00 0.00 3.86
2453 2479 4.270834 TCACGTAGAAGAAGCATAGGAGT 58.729 43.478 0.00 0.00 0.00 3.85
2467 2518 6.535150 CCAGCTGAAATATTTCTTCACGTAGA 59.465 38.462 24.77 4.72 38.02 2.59
2469 2520 6.403049 TCCAGCTGAAATATTTCTTCACGTA 58.597 36.000 24.77 5.98 38.02 3.57
2470 2521 5.245531 TCCAGCTGAAATATTTCTTCACGT 58.754 37.500 24.77 5.35 38.02 4.49
2472 2523 6.258727 TCGATCCAGCTGAAATATTTCTTCAC 59.741 38.462 24.77 13.46 38.02 3.18
2473 2524 6.348498 TCGATCCAGCTGAAATATTTCTTCA 58.652 36.000 24.77 8.61 38.02 3.02
2475 2526 7.222872 AGATCGATCCAGCTGAAATATTTCTT 58.777 34.615 24.77 10.92 38.02 2.52
2476 2527 6.767456 AGATCGATCCAGCTGAAATATTTCT 58.233 36.000 24.77 6.22 38.02 2.52
2477 2528 7.041508 ACAAGATCGATCCAGCTGAAATATTTC 60.042 37.037 21.66 19.37 37.69 2.17
2478 2529 6.769822 ACAAGATCGATCCAGCTGAAATATTT 59.230 34.615 21.66 0.00 0.00 1.40
2479 2530 6.294473 ACAAGATCGATCCAGCTGAAATATT 58.706 36.000 21.66 2.21 0.00 1.28
2480 2531 5.862845 ACAAGATCGATCCAGCTGAAATAT 58.137 37.500 21.66 2.74 0.00 1.28
2519 2573 4.699735 TGCCATGGTAAAACAGAGTATGTG 59.300 41.667 14.67 0.00 43.00 3.21
2534 2588 1.341080 CTTCCAAAACCTGCCATGGT 58.659 50.000 14.67 0.00 43.11 3.55
2570 2624 1.338389 GCCAAGTAAAGTACGCCCTCA 60.338 52.381 0.00 0.00 0.00 3.86
2582 2636 2.949177 TCCTGCTTCTTGCCAAGTAA 57.051 45.000 4.04 0.00 42.00 2.24
2599 2653 4.097892 ACCAAACACAATGACAAGTCTTCC 59.902 41.667 1.53 0.00 0.00 3.46
2691 2899 6.656632 TGTAACCATGCAACAATTTAAGGA 57.343 33.333 0.00 0.00 0.00 3.36
2792 3000 2.625460 CCAAAGCTCCCCCATCCCA 61.625 63.158 0.00 0.00 0.00 4.37
2819 3028 2.671619 CAAATGCCCGTGGTCCGT 60.672 61.111 0.00 0.00 33.66 4.69
2825 3034 2.086869 ACATCTTCTCAAATGCCCGTG 58.913 47.619 0.00 0.00 0.00 4.94
2826 3035 2.026822 AGACATCTTCTCAAATGCCCGT 60.027 45.455 0.00 0.00 0.00 5.28
2827 3036 2.636830 AGACATCTTCTCAAATGCCCG 58.363 47.619 0.00 0.00 0.00 6.13
2828 3037 5.067023 CCTAAAGACATCTTCTCAAATGCCC 59.933 44.000 0.00 0.00 34.61 5.36
2829 3038 5.067023 CCCTAAAGACATCTTCTCAAATGCC 59.933 44.000 0.00 0.00 34.61 4.40
2830 3039 5.449725 GCCCTAAAGACATCTTCTCAAATGC 60.450 44.000 0.00 0.00 34.61 3.56
2831 3040 5.067023 GGCCCTAAAGACATCTTCTCAAATG 59.933 44.000 0.00 0.00 34.61 2.32
2832 3041 5.196695 GGCCCTAAAGACATCTTCTCAAAT 58.803 41.667 0.00 0.00 34.61 2.32
2833 3042 4.042809 TGGCCCTAAAGACATCTTCTCAAA 59.957 41.667 0.00 0.00 34.61 2.69
2855 3088 1.186917 TGGCTTTTGGGGCATCACTG 61.187 55.000 0.00 0.00 36.85 3.66
2872 3105 9.813826 AACCAGATATTTTCTCCCTAAATATGG 57.186 33.333 0.00 0.00 37.95 2.74
2891 3124 3.398318 GGTTAATCCCCCAAACCAGAT 57.602 47.619 0.00 0.00 41.89 2.90
2920 3311 3.366396 ACGAAGTGTCTGAGGGATATGT 58.634 45.455 0.00 0.00 42.51 2.29
3014 3407 3.426787 TCGGTCTCCCAATTTTTGCTA 57.573 42.857 0.00 0.00 0.00 3.49
3120 3513 1.561717 CGCCGATTTTGACACCGACA 61.562 55.000 0.00 0.00 0.00 4.35
3121 3514 1.131826 CGCCGATTTTGACACCGAC 59.868 57.895 0.00 0.00 0.00 4.79
3122 3515 2.030401 CCGCCGATTTTGACACCGA 61.030 57.895 0.00 0.00 0.00 4.69
3123 3516 1.366111 ATCCGCCGATTTTGACACCG 61.366 55.000 0.00 0.00 0.00 4.94
3124 3517 0.377203 GATCCGCCGATTTTGACACC 59.623 55.000 0.00 0.00 0.00 4.16
3125 3518 1.327764 GAGATCCGCCGATTTTGACAC 59.672 52.381 0.00 0.00 0.00 3.67
3126 3519 1.651987 GAGATCCGCCGATTTTGACA 58.348 50.000 0.00 0.00 0.00 3.58
3127 3520 0.577269 CGAGATCCGCCGATTTTGAC 59.423 55.000 0.00 0.00 0.00 3.18
3128 3521 0.529773 CCGAGATCCGCCGATTTTGA 60.530 55.000 0.00 0.00 36.84 2.69
3129 3522 1.498865 CCCGAGATCCGCCGATTTTG 61.499 60.000 0.00 0.00 36.84 2.44
3130 3523 1.227556 CCCGAGATCCGCCGATTTT 60.228 57.895 0.00 0.00 36.84 1.82
3131 3524 1.111116 TACCCGAGATCCGCCGATTT 61.111 55.000 0.00 0.00 36.84 2.17
3132 3525 1.524863 CTACCCGAGATCCGCCGATT 61.525 60.000 0.00 0.00 36.84 3.34
3133 3526 1.972223 CTACCCGAGATCCGCCGAT 60.972 63.158 0.00 0.00 36.84 4.18
3134 3527 2.593725 CTACCCGAGATCCGCCGA 60.594 66.667 0.00 0.00 36.84 5.54
3135 3528 3.671411 CCTACCCGAGATCCGCCG 61.671 72.222 0.00 0.00 36.84 6.46
3136 3529 3.303928 CCCTACCCGAGATCCGCC 61.304 72.222 0.00 0.00 36.84 6.13
3137 3530 3.303928 CCCCTACCCGAGATCCGC 61.304 72.222 0.00 0.00 36.84 5.54
3138 3531 2.600769 CCCCCTACCCGAGATCCG 60.601 72.222 0.00 0.00 38.18 4.18
3139 3532 1.533513 GACCCCCTACCCGAGATCC 60.534 68.421 0.00 0.00 0.00 3.36
3140 3533 1.533513 GGACCCCCTACCCGAGATC 60.534 68.421 0.00 0.00 0.00 2.75
3141 3534 2.613421 GGACCCCCTACCCGAGAT 59.387 66.667 0.00 0.00 0.00 2.75
3142 3535 3.759101 GGGACCCCCTACCCGAGA 61.759 72.222 0.00 0.00 41.34 4.04
3146 3539 3.085947 GTTCGGGACCCCCTACCC 61.086 72.222 4.46 0.00 42.67 3.69
3147 3540 2.040114 AGTTCGGGACCCCCTACC 59.960 66.667 4.46 0.00 42.67 3.18
3148 3541 1.611556 ACAGTTCGGGACCCCCTAC 60.612 63.158 4.46 0.29 42.67 3.18
3149 3542 1.611261 CACAGTTCGGGACCCCCTA 60.611 63.158 4.46 0.00 42.67 3.53
3150 3543 2.928396 CACAGTTCGGGACCCCCT 60.928 66.667 4.46 0.00 42.67 4.79
3151 3544 4.717313 GCACAGTTCGGGACCCCC 62.717 72.222 4.46 0.00 41.09 5.40
3153 3546 4.309950 ACGCACAGTTCGGGACCC 62.310 66.667 0.00 0.00 0.00 4.46
3154 3547 1.870055 TAGACGCACAGTTCGGGACC 61.870 60.000 0.00 0.00 0.00 4.46
3155 3548 0.456312 CTAGACGCACAGTTCGGGAC 60.456 60.000 0.00 0.00 0.00 4.46
3156 3549 1.592400 CCTAGACGCACAGTTCGGGA 61.592 60.000 0.00 0.00 0.00 5.14
3157 3550 1.153823 CCTAGACGCACAGTTCGGG 60.154 63.158 0.00 0.00 0.00 5.14
3158 3551 1.805945 GCCTAGACGCACAGTTCGG 60.806 63.158 0.00 0.00 0.00 4.30
3159 3552 2.152699 CGCCTAGACGCACAGTTCG 61.153 63.158 0.00 0.00 0.00 3.95
3160 3553 1.805945 CCGCCTAGACGCACAGTTC 60.806 63.158 0.00 0.00 0.00 3.01
3161 3554 1.605058 ATCCGCCTAGACGCACAGTT 61.605 55.000 0.00 0.00 0.00 3.16
3162 3555 2.052690 ATCCGCCTAGACGCACAGT 61.053 57.895 0.00 0.00 0.00 3.55
3163 3556 1.589993 CATCCGCCTAGACGCACAG 60.590 63.158 0.00 0.00 0.00 3.66
3164 3557 2.494445 CATCCGCCTAGACGCACA 59.506 61.111 0.00 0.00 0.00 4.57
3165 3558 1.731433 TACCATCCGCCTAGACGCAC 61.731 60.000 0.00 0.00 0.00 5.34
3166 3559 1.038681 TTACCATCCGCCTAGACGCA 61.039 55.000 0.00 0.00 0.00 5.24
3167 3560 0.596859 GTTACCATCCGCCTAGACGC 60.597 60.000 0.00 0.00 0.00 5.19
3168 3561 0.742505 TGTTACCATCCGCCTAGACG 59.257 55.000 0.00 0.00 0.00 4.18
3169 3562 1.068741 CCTGTTACCATCCGCCTAGAC 59.931 57.143 0.00 0.00 0.00 2.59
3170 3563 1.063492 TCCTGTTACCATCCGCCTAGA 60.063 52.381 0.00 0.00 0.00 2.43
3171 3564 1.341531 CTCCTGTTACCATCCGCCTAG 59.658 57.143 0.00 0.00 0.00 3.02
3172 3565 1.063492 TCTCCTGTTACCATCCGCCTA 60.063 52.381 0.00 0.00 0.00 3.93
3173 3566 0.325296 TCTCCTGTTACCATCCGCCT 60.325 55.000 0.00 0.00 0.00 5.52
3174 3567 0.179081 GTCTCCTGTTACCATCCGCC 60.179 60.000 0.00 0.00 0.00 6.13
3175 3568 0.535335 TGTCTCCTGTTACCATCCGC 59.465 55.000 0.00 0.00 0.00 5.54
3176 3569 2.418746 CCTTGTCTCCTGTTACCATCCG 60.419 54.545 0.00 0.00 0.00 4.18
3177 3570 2.092914 CCCTTGTCTCCTGTTACCATCC 60.093 54.545 0.00 0.00 0.00 3.51
3178 3571 2.838202 TCCCTTGTCTCCTGTTACCATC 59.162 50.000 0.00 0.00 0.00 3.51
3179 3572 2.572104 GTCCCTTGTCTCCTGTTACCAT 59.428 50.000 0.00 0.00 0.00 3.55
3180 3573 1.975680 GTCCCTTGTCTCCTGTTACCA 59.024 52.381 0.00 0.00 0.00 3.25
3181 3574 1.975680 TGTCCCTTGTCTCCTGTTACC 59.024 52.381 0.00 0.00 0.00 2.85
3182 3575 2.609737 CGTGTCCCTTGTCTCCTGTTAC 60.610 54.545 0.00 0.00 0.00 2.50
3183 3576 1.616865 CGTGTCCCTTGTCTCCTGTTA 59.383 52.381 0.00 0.00 0.00 2.41
3184 3577 0.393077 CGTGTCCCTTGTCTCCTGTT 59.607 55.000 0.00 0.00 0.00 3.16
3185 3578 0.469331 TCGTGTCCCTTGTCTCCTGT 60.469 55.000 0.00 0.00 0.00 4.00
3186 3579 0.898320 ATCGTGTCCCTTGTCTCCTG 59.102 55.000 0.00 0.00 0.00 3.86
3187 3580 0.898320 CATCGTGTCCCTTGTCTCCT 59.102 55.000 0.00 0.00 0.00 3.69
3188 3581 0.608640 ACATCGTGTCCCTTGTCTCC 59.391 55.000 0.00 0.00 0.00 3.71
3189 3582 2.457366 AACATCGTGTCCCTTGTCTC 57.543 50.000 0.00 0.00 0.00 3.36
3190 3583 2.930826 AAACATCGTGTCCCTTGTCT 57.069 45.000 0.00 0.00 0.00 3.41
3191 3584 3.187842 GGTAAAACATCGTGTCCCTTGTC 59.812 47.826 0.00 0.00 0.00 3.18
3192 3585 3.143728 GGTAAAACATCGTGTCCCTTGT 58.856 45.455 0.00 0.00 0.00 3.16
3193 3586 2.486592 GGGTAAAACATCGTGTCCCTTG 59.513 50.000 0.00 0.00 0.00 3.61
3194 3587 2.106857 TGGGTAAAACATCGTGTCCCTT 59.893 45.455 11.28 2.23 35.00 3.95
3195 3588 1.700739 TGGGTAAAACATCGTGTCCCT 59.299 47.619 11.28 0.00 35.00 4.20
3196 3589 2.081462 CTGGGTAAAACATCGTGTCCC 58.919 52.381 0.00 0.00 0.00 4.46
3197 3590 2.081462 CCTGGGTAAAACATCGTGTCC 58.919 52.381 0.00 0.00 0.00 4.02
3198 3591 2.774687 ACCTGGGTAAAACATCGTGTC 58.225 47.619 0.00 0.00 0.00 3.67
3199 3592 2.943036 ACCTGGGTAAAACATCGTGT 57.057 45.000 0.00 0.00 0.00 4.49
3200 3593 3.305064 CCAAACCTGGGTAAAACATCGTG 60.305 47.826 0.00 0.00 39.30 4.35
3201 3594 2.888414 CCAAACCTGGGTAAAACATCGT 59.112 45.455 0.00 0.00 39.30 3.73
3202 3595 3.569250 CCAAACCTGGGTAAAACATCG 57.431 47.619 0.00 0.00 39.30 3.84
3213 3606 1.607467 CAAGAGGGCCCAAACCTGG 60.607 63.158 27.56 9.05 43.10 4.45
3214 3607 0.040204 ATCAAGAGGGCCCAAACCTG 59.960 55.000 27.56 14.62 38.79 4.00
3215 3608 0.040204 CATCAAGAGGGCCCAAACCT 59.960 55.000 27.56 12.49 42.18 3.50
3216 3609 0.972471 CCATCAAGAGGGCCCAAACC 60.972 60.000 27.56 10.11 0.00 3.27
3217 3610 0.039618 TCCATCAAGAGGGCCCAAAC 59.960 55.000 27.56 15.15 31.15 2.93
3218 3611 0.332632 CTCCATCAAGAGGGCCCAAA 59.667 55.000 27.56 4.04 31.15 3.28
3219 3612 2.001803 CTCCATCAAGAGGGCCCAA 58.998 57.895 27.56 3.63 31.15 4.12
3220 3613 3.745546 CTCCATCAAGAGGGCCCA 58.254 61.111 27.56 1.75 31.15 5.36
3226 3619 4.576330 AGGGTTTTACCTCCATCAAGAG 57.424 45.455 0.00 0.00 38.64 2.85
3227 3620 4.081309 CGTAGGGTTTTACCTCCATCAAGA 60.081 45.833 0.00 0.00 42.09 3.02
3228 3621 4.189231 CGTAGGGTTTTACCTCCATCAAG 58.811 47.826 0.00 0.00 42.09 3.02
3229 3622 3.583966 ACGTAGGGTTTTACCTCCATCAA 59.416 43.478 0.00 0.00 42.09 2.57
3230 3623 3.175594 ACGTAGGGTTTTACCTCCATCA 58.824 45.455 0.00 0.00 42.09 3.07
3231 3624 3.431346 GGACGTAGGGTTTTACCTCCATC 60.431 52.174 0.00 0.00 42.09 3.51
3232 3625 2.502947 GGACGTAGGGTTTTACCTCCAT 59.497 50.000 0.00 0.00 42.09 3.41
3233 3626 1.901833 GGACGTAGGGTTTTACCTCCA 59.098 52.381 0.00 0.00 42.09 3.86
3234 3627 2.093816 CAGGACGTAGGGTTTTACCTCC 60.094 54.545 0.00 0.00 42.09 4.30
3235 3628 2.676176 GCAGGACGTAGGGTTTTACCTC 60.676 54.545 0.00 0.00 42.09 3.85
3236 3629 1.277273 GCAGGACGTAGGGTTTTACCT 59.723 52.381 0.00 0.00 44.75 3.08
3237 3630 1.277273 AGCAGGACGTAGGGTTTTACC 59.723 52.381 0.00 0.00 37.60 2.85
3238 3631 2.740447 CAAGCAGGACGTAGGGTTTTAC 59.260 50.000 0.00 0.00 0.00 2.01
3239 3632 2.633967 TCAAGCAGGACGTAGGGTTTTA 59.366 45.455 0.00 0.00 0.00 1.52
3240 3633 1.418637 TCAAGCAGGACGTAGGGTTTT 59.581 47.619 0.00 0.00 0.00 2.43
3241 3634 1.053424 TCAAGCAGGACGTAGGGTTT 58.947 50.000 0.00 0.00 0.00 3.27
3242 3635 1.276622 ATCAAGCAGGACGTAGGGTT 58.723 50.000 0.00 0.00 0.00 4.11
3243 3636 1.066143 CAATCAAGCAGGACGTAGGGT 60.066 52.381 0.00 0.00 0.00 4.34
3244 3637 1.207089 TCAATCAAGCAGGACGTAGGG 59.793 52.381 0.00 0.00 0.00 3.53
3245 3638 2.672961 TCAATCAAGCAGGACGTAGG 57.327 50.000 0.00 0.00 0.00 3.18
3246 3639 5.985530 TCAATATCAATCAAGCAGGACGTAG 59.014 40.000 0.00 0.00 0.00 3.51
3247 3640 5.912892 TCAATATCAATCAAGCAGGACGTA 58.087 37.500 0.00 0.00 0.00 3.57
3248 3641 4.769688 TCAATATCAATCAAGCAGGACGT 58.230 39.130 0.00 0.00 0.00 4.34
3249 3642 5.936686 ATCAATATCAATCAAGCAGGACG 57.063 39.130 0.00 0.00 0.00 4.79
3250 3643 8.790718 ACAATATCAATATCAATCAAGCAGGAC 58.209 33.333 0.00 0.00 0.00 3.85
3251 3644 8.789762 CACAATATCAATATCAATCAAGCAGGA 58.210 33.333 0.00 0.00 0.00 3.86
3252 3645 8.027189 CCACAATATCAATATCAATCAAGCAGG 58.973 37.037 0.00 0.00 0.00 4.85
3253 3646 8.789762 TCCACAATATCAATATCAATCAAGCAG 58.210 33.333 0.00 0.00 0.00 4.24
3254 3647 8.694581 TCCACAATATCAATATCAATCAAGCA 57.305 30.769 0.00 0.00 0.00 3.91
3255 3648 9.569167 CATCCACAATATCAATATCAATCAAGC 57.431 33.333 0.00 0.00 0.00 4.01
3266 3659 9.466497 ACTCTTGTAAACATCCACAATATCAAT 57.534 29.630 0.00 0.00 34.34 2.57
3267 3660 8.729756 CACTCTTGTAAACATCCACAATATCAA 58.270 33.333 0.00 0.00 34.34 2.57
3268 3661 7.336679 CCACTCTTGTAAACATCCACAATATCA 59.663 37.037 0.00 0.00 34.34 2.15
3269 3662 7.552687 TCCACTCTTGTAAACATCCACAATATC 59.447 37.037 0.00 0.00 34.34 1.63
3270 3663 7.402054 TCCACTCTTGTAAACATCCACAATAT 58.598 34.615 0.00 0.00 34.34 1.28
3271 3664 6.774673 TCCACTCTTGTAAACATCCACAATA 58.225 36.000 0.00 0.00 34.34 1.90
3272 3665 5.630121 TCCACTCTTGTAAACATCCACAAT 58.370 37.500 0.00 0.00 34.34 2.71
3273 3666 5.042463 TCCACTCTTGTAAACATCCACAA 57.958 39.130 0.00 0.00 33.76 3.33
3274 3667 4.698201 TCCACTCTTGTAAACATCCACA 57.302 40.909 0.00 0.00 0.00 4.17
3275 3668 5.491982 AGATCCACTCTTGTAAACATCCAC 58.508 41.667 0.00 0.00 0.00 4.02
3276 3669 5.762179 AGATCCACTCTTGTAAACATCCA 57.238 39.130 0.00 0.00 0.00 3.41
3277 3670 6.049790 GGTAGATCCACTCTTGTAAACATCC 58.950 44.000 0.00 0.00 35.28 3.51
3278 3671 6.640518 TGGTAGATCCACTCTTGTAAACATC 58.359 40.000 0.00 0.00 41.93 3.06
3279 3672 6.620877 TGGTAGATCCACTCTTGTAAACAT 57.379 37.500 0.00 0.00 41.93 2.71
3295 3688 3.226777 CCTCCTTGATCTCGTGGTAGAT 58.773 50.000 0.00 0.00 38.95 1.98
3296 3689 2.656002 CCTCCTTGATCTCGTGGTAGA 58.344 52.381 0.00 0.00 0.00 2.59
3297 3690 1.067821 GCCTCCTTGATCTCGTGGTAG 59.932 57.143 0.00 0.00 0.00 3.18
3298 3691 1.112113 GCCTCCTTGATCTCGTGGTA 58.888 55.000 0.00 0.00 0.00 3.25
3299 3692 0.616111 AGCCTCCTTGATCTCGTGGT 60.616 55.000 0.00 0.00 0.00 4.16
3300 3693 1.403814 TAGCCTCCTTGATCTCGTGG 58.596 55.000 0.00 0.00 0.00 4.94
3301 3694 3.190874 GTTTAGCCTCCTTGATCTCGTG 58.809 50.000 0.00 0.00 0.00 4.35
3302 3695 2.168728 GGTTTAGCCTCCTTGATCTCGT 59.831 50.000 0.00 0.00 0.00 4.18
3303 3696 2.483889 GGGTTTAGCCTCCTTGATCTCG 60.484 54.545 0.00 0.00 37.43 4.04
3304 3697 2.774809 AGGGTTTAGCCTCCTTGATCTC 59.225 50.000 0.00 0.00 37.43 2.75
3305 3698 2.852130 AGGGTTTAGCCTCCTTGATCT 58.148 47.619 0.00 0.00 37.43 2.75
3306 3699 3.967987 TCTAGGGTTTAGCCTCCTTGATC 59.032 47.826 3.32 0.00 37.43 2.92
3307 3700 4.008916 TCTAGGGTTTAGCCTCCTTGAT 57.991 45.455 3.32 0.00 37.43 2.57
3308 3701 3.484953 TCTAGGGTTTAGCCTCCTTGA 57.515 47.619 3.32 0.00 37.43 3.02
3309 3702 3.682999 GCTTCTAGGGTTTAGCCTCCTTG 60.683 52.174 3.32 0.00 37.43 3.61
3310 3703 2.506231 GCTTCTAGGGTTTAGCCTCCTT 59.494 50.000 3.32 0.00 37.43 3.36
3311 3704 2.120312 GCTTCTAGGGTTTAGCCTCCT 58.880 52.381 3.32 0.00 37.43 3.69
3312 3705 2.120312 AGCTTCTAGGGTTTAGCCTCC 58.880 52.381 3.32 0.00 37.43 4.30
3313 3706 3.243941 GCTAGCTTCTAGGGTTTAGCCTC 60.244 52.174 7.70 0.00 37.43 4.70
3314 3707 2.701423 GCTAGCTTCTAGGGTTTAGCCT 59.299 50.000 7.70 5.72 37.43 4.58
3315 3708 2.224329 GGCTAGCTTCTAGGGTTTAGCC 60.224 54.545 15.72 15.56 44.26 3.93
3316 3709 2.701423 AGGCTAGCTTCTAGGGTTTAGC 59.299 50.000 15.72 0.00 34.32 3.09
3317 3710 5.046950 CCATAGGCTAGCTTCTAGGGTTTAG 60.047 48.000 18.28 0.00 34.00 1.85
3318 3711 4.838986 CCATAGGCTAGCTTCTAGGGTTTA 59.161 45.833 18.28 0.00 34.00 2.01
3319 3712 3.648545 CCATAGGCTAGCTTCTAGGGTTT 59.351 47.826 18.28 0.00 34.00 3.27
3320 3713 3.243724 CCATAGGCTAGCTTCTAGGGTT 58.756 50.000 18.28 0.00 34.00 4.11
3321 3714 2.180308 ACCATAGGCTAGCTTCTAGGGT 59.820 50.000 23.48 23.48 43.27 4.34
3322 3715 2.896039 ACCATAGGCTAGCTTCTAGGG 58.104 52.381 22.47 22.47 41.57 3.53
3323 3716 5.265191 TCATACCATAGGCTAGCTTCTAGG 58.735 45.833 15.72 12.08 0.00 3.02
3324 3717 7.093552 ACAATCATACCATAGGCTAGCTTCTAG 60.094 40.741 15.72 3.93 0.00 2.43
3325 3718 6.726299 ACAATCATACCATAGGCTAGCTTCTA 59.274 38.462 15.72 8.91 0.00 2.10
3326 3719 5.545723 ACAATCATACCATAGGCTAGCTTCT 59.454 40.000 15.72 6.71 0.00 2.85
3327 3720 5.799213 ACAATCATACCATAGGCTAGCTTC 58.201 41.667 15.72 0.00 0.00 3.86
3328 3721 5.832539 ACAATCATACCATAGGCTAGCTT 57.167 39.130 15.72 10.11 0.00 3.74
3329 3722 6.935240 TTACAATCATACCATAGGCTAGCT 57.065 37.500 15.72 3.22 0.00 3.32
3330 3723 6.540189 CCATTACAATCATACCATAGGCTAGC 59.460 42.308 6.04 6.04 0.00 3.42
3331 3724 7.624549 ACCATTACAATCATACCATAGGCTAG 58.375 38.462 0.00 0.00 0.00 3.42
3332 3725 7.568128 ACCATTACAATCATACCATAGGCTA 57.432 36.000 0.00 0.00 0.00 3.93
3333 3726 6.454223 ACCATTACAATCATACCATAGGCT 57.546 37.500 0.00 0.00 0.00 4.58
3334 3727 6.490040 ACAACCATTACAATCATACCATAGGC 59.510 38.462 0.00 0.00 0.00 3.93
3335 3728 8.352201 CAACAACCATTACAATCATACCATAGG 58.648 37.037 0.00 0.00 0.00 2.57
3336 3729 8.902806 ACAACAACCATTACAATCATACCATAG 58.097 33.333 0.00 0.00 0.00 2.23
3337 3730 8.815565 ACAACAACCATTACAATCATACCATA 57.184 30.769 0.00 0.00 0.00 2.74
3338 3731 7.716799 ACAACAACCATTACAATCATACCAT 57.283 32.000 0.00 0.00 0.00 3.55
3339 3732 7.014711 ACAACAACAACCATTACAATCATACCA 59.985 33.333 0.00 0.00 0.00 3.25
3340 3733 7.328249 CACAACAACAACCATTACAATCATACC 59.672 37.037 0.00 0.00 0.00 2.73
3341 3734 7.865385 ACACAACAACAACCATTACAATCATAC 59.135 33.333 0.00 0.00 0.00 2.39
3342 3735 7.946207 ACACAACAACAACCATTACAATCATA 58.054 30.769 0.00 0.00 0.00 2.15
3343 3736 6.815089 ACACAACAACAACCATTACAATCAT 58.185 32.000 0.00 0.00 0.00 2.45
3344 3737 6.214191 ACACAACAACAACCATTACAATCA 57.786 33.333 0.00 0.00 0.00 2.57
3345 3738 5.689961 GGACACAACAACAACCATTACAATC 59.310 40.000 0.00 0.00 0.00 2.67
3346 3739 5.362430 AGGACACAACAACAACCATTACAAT 59.638 36.000 0.00 0.00 0.00 2.71
3347 3740 4.707448 AGGACACAACAACAACCATTACAA 59.293 37.500 0.00 0.00 0.00 2.41
3348 3741 4.274147 AGGACACAACAACAACCATTACA 58.726 39.130 0.00 0.00 0.00 2.41
3349 3742 4.911514 AGGACACAACAACAACCATTAC 57.088 40.909 0.00 0.00 0.00 1.89
3350 3743 4.512198 CGTAGGACACAACAACAACCATTA 59.488 41.667 0.00 0.00 0.00 1.90
3351 3744 3.314080 CGTAGGACACAACAACAACCATT 59.686 43.478 0.00 0.00 0.00 3.16
3352 3745 2.875933 CGTAGGACACAACAACAACCAT 59.124 45.455 0.00 0.00 0.00 3.55
3353 3746 2.281517 CGTAGGACACAACAACAACCA 58.718 47.619 0.00 0.00 0.00 3.67
3373 3766 0.831307 AAACCGGATGGCTCTAGTCC 59.169 55.000 9.46 0.00 39.70 3.85
3374 3767 5.662674 ATATAAACCGGATGGCTCTAGTC 57.337 43.478 9.46 0.00 39.70 2.59
3375 3768 6.377712 GTCTATATAAACCGGATGGCTCTAGT 59.622 42.308 9.46 0.00 39.70 2.57
3376 3769 6.377429 TGTCTATATAAACCGGATGGCTCTAG 59.623 42.308 9.46 0.81 39.70 2.43
3377 3770 6.152323 GTGTCTATATAAACCGGATGGCTCTA 59.848 42.308 9.46 0.00 39.70 2.43
3378 3771 5.047235 GTGTCTATATAAACCGGATGGCTCT 60.047 44.000 9.46 0.00 39.70 4.09
3379 3772 5.169295 GTGTCTATATAAACCGGATGGCTC 58.831 45.833 9.46 0.00 39.70 4.70
3380 3773 4.020485 GGTGTCTATATAAACCGGATGGCT 60.020 45.833 9.46 0.00 39.70 4.75
3381 3774 4.251268 GGTGTCTATATAAACCGGATGGC 58.749 47.826 9.46 0.00 39.70 4.40
3388 3781 4.220163 CCCTCTCCGGTGTCTATATAAACC 59.780 50.000 0.00 0.68 0.00 3.27
3389 3782 4.321824 GCCCTCTCCGGTGTCTATATAAAC 60.322 50.000 0.00 0.00 0.00 2.01
3390 3783 3.830755 GCCCTCTCCGGTGTCTATATAAA 59.169 47.826 0.00 0.00 0.00 1.40
3391 3784 3.075582 AGCCCTCTCCGGTGTCTATATAA 59.924 47.826 0.00 0.00 0.00 0.98
3392 3785 2.648304 AGCCCTCTCCGGTGTCTATATA 59.352 50.000 0.00 0.00 0.00 0.86
3393 3786 1.429687 AGCCCTCTCCGGTGTCTATAT 59.570 52.381 0.00 0.00 0.00 0.86
3394 3787 0.851469 AGCCCTCTCCGGTGTCTATA 59.149 55.000 0.00 0.00 0.00 1.31
3395 3788 0.851469 TAGCCCTCTCCGGTGTCTAT 59.149 55.000 0.00 0.00 0.00 1.98
3396 3789 0.183014 CTAGCCCTCTCCGGTGTCTA 59.817 60.000 0.00 0.05 0.00 2.59
3397 3790 1.076632 CTAGCCCTCTCCGGTGTCT 60.077 63.158 0.00 0.00 0.00 3.41
3398 3791 2.128507 CCTAGCCCTCTCCGGTGTC 61.129 68.421 0.00 0.00 0.00 3.67
3399 3792 2.042843 CCTAGCCCTCTCCGGTGT 60.043 66.667 0.00 0.00 0.00 4.16
3400 3793 2.840102 CCCTAGCCCTCTCCGGTG 60.840 72.222 0.00 0.00 0.00 4.94
3401 3794 1.587522 TAACCCTAGCCCTCTCCGGT 61.588 60.000 0.00 0.00 0.00 5.28
3402 3795 1.114119 GTAACCCTAGCCCTCTCCGG 61.114 65.000 0.00 0.00 0.00 5.14
3403 3796 0.396695 TGTAACCCTAGCCCTCTCCG 60.397 60.000 0.00 0.00 0.00 4.63
3404 3797 2.104669 ATGTAACCCTAGCCCTCTCC 57.895 55.000 0.00 0.00 0.00 3.71
3405 3798 4.083565 CTCTATGTAACCCTAGCCCTCTC 58.916 52.174 0.00 0.00 0.00 3.20
3406 3799 3.467863 ACTCTATGTAACCCTAGCCCTCT 59.532 47.826 0.00 0.00 0.00 3.69
3407 3800 3.827876 GACTCTATGTAACCCTAGCCCTC 59.172 52.174 0.00 0.00 0.00 4.30
3408 3801 3.751245 CGACTCTATGTAACCCTAGCCCT 60.751 52.174 0.00 0.00 0.00 5.19
3409 3802 2.557490 CGACTCTATGTAACCCTAGCCC 59.443 54.545 0.00 0.00 0.00 5.19
3410 3803 2.557490 CCGACTCTATGTAACCCTAGCC 59.443 54.545 0.00 0.00 0.00 3.93
3411 3804 3.220940 ACCGACTCTATGTAACCCTAGC 58.779 50.000 0.00 0.00 0.00 3.42
3412 3805 5.824624 TGTAACCGACTCTATGTAACCCTAG 59.175 44.000 0.00 0.00 0.00 3.02
3413 3806 5.754782 TGTAACCGACTCTATGTAACCCTA 58.245 41.667 0.00 0.00 0.00 3.53
3414 3807 4.603131 TGTAACCGACTCTATGTAACCCT 58.397 43.478 0.00 0.00 0.00 4.34
3415 3808 4.989279 TGTAACCGACTCTATGTAACCC 57.011 45.455 0.00 0.00 0.00 4.11
3416 3809 5.751990 CCATTGTAACCGACTCTATGTAACC 59.248 44.000 0.00 0.00 0.00 2.85
3417 3810 6.335777 ACCATTGTAACCGACTCTATGTAAC 58.664 40.000 0.00 0.00 0.00 2.50
3418 3811 6.534475 ACCATTGTAACCGACTCTATGTAA 57.466 37.500 0.00 0.00 0.00 2.41
3419 3812 6.263842 CCTACCATTGTAACCGACTCTATGTA 59.736 42.308 0.00 0.00 0.00 2.29
3420 3813 5.068723 CCTACCATTGTAACCGACTCTATGT 59.931 44.000 0.00 0.00 0.00 2.29
3421 3814 5.301045 TCCTACCATTGTAACCGACTCTATG 59.699 44.000 0.00 0.00 0.00 2.23
3422 3815 5.452255 TCCTACCATTGTAACCGACTCTAT 58.548 41.667 0.00 0.00 0.00 1.98
3423 3816 4.858850 TCCTACCATTGTAACCGACTCTA 58.141 43.478 0.00 0.00 0.00 2.43
3424 3817 3.700038 CTCCTACCATTGTAACCGACTCT 59.300 47.826 0.00 0.00 0.00 3.24
3425 3818 3.698040 TCTCCTACCATTGTAACCGACTC 59.302 47.826 0.00 0.00 0.00 3.36
3426 3819 3.705051 TCTCCTACCATTGTAACCGACT 58.295 45.455 0.00 0.00 0.00 4.18
3427 3820 4.341520 AGATCTCCTACCATTGTAACCGAC 59.658 45.833 0.00 0.00 0.00 4.79
3428 3821 4.543689 AGATCTCCTACCATTGTAACCGA 58.456 43.478 0.00 0.00 0.00 4.69
3429 3822 4.939052 AGATCTCCTACCATTGTAACCG 57.061 45.455 0.00 0.00 0.00 4.44
3430 3823 5.301298 ACGTAGATCTCCTACCATTGTAACC 59.699 44.000 0.00 0.00 43.78 2.85
3431 3824 6.388435 ACGTAGATCTCCTACCATTGTAAC 57.612 41.667 0.00 0.00 43.78 2.50
3432 3825 7.392673 GGATACGTAGATCTCCTACCATTGTAA 59.607 40.741 0.00 0.00 43.78 2.41
3433 3826 6.883217 GGATACGTAGATCTCCTACCATTGTA 59.117 42.308 0.00 0.00 43.78 2.41
3434 3827 5.711036 GGATACGTAGATCTCCTACCATTGT 59.289 44.000 0.00 0.00 43.78 2.71
3435 3828 6.197364 GGATACGTAGATCTCCTACCATTG 57.803 45.833 0.00 0.00 43.78 2.82
3453 3846 1.792949 CAAGCTTGGCGATACGGATAC 59.207 52.381 19.14 0.00 0.00 2.24
3454 3847 1.872237 GCAAGCTTGGCGATACGGATA 60.872 52.381 27.10 0.00 0.00 2.59
3455 3848 1.160329 GCAAGCTTGGCGATACGGAT 61.160 55.000 27.10 0.00 0.00 4.18
3456 3849 1.813753 GCAAGCTTGGCGATACGGA 60.814 57.895 27.10 0.00 0.00 4.69
3457 3850 2.709475 GCAAGCTTGGCGATACGG 59.291 61.111 27.10 0.00 0.00 4.02
3458 3851 2.709475 GGCAAGCTTGGCGATACG 59.291 61.111 33.68 4.49 43.97 3.06
3465 3858 2.956987 CGTGGAAGGCAAGCTTGG 59.043 61.111 27.10 9.80 0.00 3.61
3474 3867 0.537371 ACTTTCCTTGGCGTGGAAGG 60.537 55.000 15.33 15.33 43.48 3.46
3475 3868 0.875059 GACTTTCCTTGGCGTGGAAG 59.125 55.000 10.20 8.04 43.48 3.46
3476 3869 0.536460 GGACTTTCCTTGGCGTGGAA 60.536 55.000 6.88 6.88 41.33 3.53
3477 3870 1.072505 GGACTTTCCTTGGCGTGGA 59.927 57.895 0.00 0.00 32.53 4.02
3478 3871 1.971695 GGGACTTTCCTTGGCGTGG 60.972 63.158 0.00 0.00 36.57 4.94
3479 3872 0.609131 ATGGGACTTTCCTTGGCGTG 60.609 55.000 0.00 0.00 36.57 5.34
3480 3873 0.322546 GATGGGACTTTCCTTGGCGT 60.323 55.000 0.00 0.00 36.57 5.68
3481 3874 1.032114 GGATGGGACTTTCCTTGGCG 61.032 60.000 0.00 0.00 36.57 5.69
3482 3875 1.032114 CGGATGGGACTTTCCTTGGC 61.032 60.000 0.00 0.00 36.57 4.52
3483 3876 0.394352 CCGGATGGGACTTTCCTTGG 60.394 60.000 0.00 0.00 38.47 3.61
3484 3877 0.618458 TCCGGATGGGACTTTCCTTG 59.382 55.000 0.00 0.00 40.94 3.61
3485 3878 3.098445 TCCGGATGGGACTTTCCTT 57.902 52.632 0.00 0.00 40.94 3.36
3486 3879 4.910613 TCCGGATGGGACTTTCCT 57.089 55.556 0.00 0.00 40.94 3.36
3500 3893 2.126580 GACTTCGTCCCGTGTCCG 60.127 66.667 0.00 0.00 0.00 4.79
3501 3894 0.388263 GAAGACTTCGTCCCGTGTCC 60.388 60.000 0.00 0.00 34.39 4.02
3502 3895 0.313043 TGAAGACTTCGTCCCGTGTC 59.687 55.000 10.56 0.00 32.18 3.67
3503 3896 0.748450 TTGAAGACTTCGTCCCGTGT 59.252 50.000 10.56 0.00 32.18 4.49
3504 3897 1.993370 GATTGAAGACTTCGTCCCGTG 59.007 52.381 10.56 0.00 32.18 4.94
3505 3898 1.893801 AGATTGAAGACTTCGTCCCGT 59.106 47.619 10.56 0.00 32.18 5.28
3506 3899 2.656560 AGATTGAAGACTTCGTCCCG 57.343 50.000 10.56 0.00 32.18 5.14
3507 3900 3.665190 ACAAGATTGAAGACTTCGTCCC 58.335 45.455 10.56 0.53 32.18 4.46
3508 3901 6.334202 AGATACAAGATTGAAGACTTCGTCC 58.666 40.000 10.56 2.18 32.18 4.79
3509 3902 7.542477 TGAAGATACAAGATTGAAGACTTCGTC 59.458 37.037 10.56 10.67 34.37 4.20
3510 3903 7.378966 TGAAGATACAAGATTGAAGACTTCGT 58.621 34.615 10.56 1.87 34.37 3.85
3511 3904 7.818493 TGAAGATACAAGATTGAAGACTTCG 57.182 36.000 10.56 0.00 34.37 3.79
3518 3911 9.605275 CCAAGACTATGAAGATACAAGATTGAA 57.395 33.333 0.00 0.00 0.00 2.69
3519 3912 8.981659 TCCAAGACTATGAAGATACAAGATTGA 58.018 33.333 0.00 0.00 0.00 2.57
3520 3913 9.258826 CTCCAAGACTATGAAGATACAAGATTG 57.741 37.037 0.00 0.00 0.00 2.67
3521 3914 8.986991 ACTCCAAGACTATGAAGATACAAGATT 58.013 33.333 0.00 0.00 0.00 2.40
3522 3915 8.546083 ACTCCAAGACTATGAAGATACAAGAT 57.454 34.615 0.00 0.00 0.00 2.40
3523 3916 7.068839 GGACTCCAAGACTATGAAGATACAAGA 59.931 40.741 0.00 0.00 0.00 3.02
3524 3917 7.206687 GGACTCCAAGACTATGAAGATACAAG 58.793 42.308 0.00 0.00 0.00 3.16
3525 3918 6.183360 CGGACTCCAAGACTATGAAGATACAA 60.183 42.308 0.00 0.00 0.00 2.41
3526 3919 5.299531 CGGACTCCAAGACTATGAAGATACA 59.700 44.000 0.00 0.00 0.00 2.29
3527 3920 5.278561 CCGGACTCCAAGACTATGAAGATAC 60.279 48.000 0.00 0.00 0.00 2.24
3528 3921 4.827835 CCGGACTCCAAGACTATGAAGATA 59.172 45.833 0.00 0.00 0.00 1.98
3529 3922 3.639094 CCGGACTCCAAGACTATGAAGAT 59.361 47.826 0.00 0.00 0.00 2.40
3530 3923 3.024547 CCGGACTCCAAGACTATGAAGA 58.975 50.000 0.00 0.00 0.00 2.87
3531 3924 2.761208 ACCGGACTCCAAGACTATGAAG 59.239 50.000 9.46 0.00 0.00 3.02
3532 3925 2.758979 GACCGGACTCCAAGACTATGAA 59.241 50.000 9.46 0.00 0.00 2.57
3533 3926 2.376109 GACCGGACTCCAAGACTATGA 58.624 52.381 9.46 0.00 0.00 2.15
3534 3927 1.065701 CGACCGGACTCCAAGACTATG 59.934 57.143 9.46 0.00 0.00 2.23
3535 3928 1.064906 TCGACCGGACTCCAAGACTAT 60.065 52.381 9.46 0.00 0.00 2.12
3536 3929 0.325933 TCGACCGGACTCCAAGACTA 59.674 55.000 9.46 0.00 0.00 2.59
3537 3930 0.323542 ATCGACCGGACTCCAAGACT 60.324 55.000 9.46 0.00 0.00 3.24
3538 3931 0.179134 CATCGACCGGACTCCAAGAC 60.179 60.000 9.46 0.00 0.00 3.01
3539 3932 0.323087 TCATCGACCGGACTCCAAGA 60.323 55.000 9.46 0.00 0.00 3.02
3540 3933 0.747255 ATCATCGACCGGACTCCAAG 59.253 55.000 9.46 0.00 0.00 3.61
3541 3934 0.459899 CATCATCGACCGGACTCCAA 59.540 55.000 9.46 0.00 0.00 3.53
3542 3935 0.395173 TCATCATCGACCGGACTCCA 60.395 55.000 9.46 0.00 0.00 3.86
3543 3936 0.962489 ATCATCATCGACCGGACTCC 59.038 55.000 9.46 0.00 0.00 3.85
3544 3937 2.814919 ACTATCATCATCGACCGGACTC 59.185 50.000 9.46 0.00 0.00 3.36
3545 3938 2.814919 GACTATCATCATCGACCGGACT 59.185 50.000 9.46 0.00 0.00 3.85
3546 3939 2.095161 GGACTATCATCATCGACCGGAC 60.095 54.545 9.46 0.00 0.00 4.79
3547 3940 2.160205 GGACTATCATCATCGACCGGA 58.840 52.381 9.46 0.00 0.00 5.14
3548 3941 1.135660 CGGACTATCATCATCGACCGG 60.136 57.143 0.00 0.00 36.27 5.28
3549 3942 1.135660 CCGGACTATCATCATCGACCG 60.136 57.143 0.00 0.00 39.02 4.79
3550 3943 2.638556 CCGGACTATCATCATCGACC 57.361 55.000 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.