>input_sequence_48028
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-----------------------------------------------------------------ATGCACGCGCCGATG
TTGATCCTCCTGCTGTCGTCGATCGCCGCGGCGGAAGCGGCCGGCATCGGCGTCACCTACGGCAGGCGAGCGACGAGCCT
CCCGGCGCCGGCCGACGTCGCGCGGTTCCTCGCCCGCGGCACCGTCCTCGACCGCGTGAGGCTCCTGAACGCCGACCCGC
TCGCCCTGCGTGCCTTCGCCGGCATGGGCCTCTCCGTGGACGTCACCGTCCCGAACGCCCTCGTGCCGCGCATCGCCGAC
AGCGTCGCCTTCGCTCGGCAGTGGGTGCGCGACAGCGTCGCACCCCACGCGGCGGCCGGGACCAACGTATCGAGGATCCT
CGTGGGCCGCGACGTGATCTCGCAGGCCAACCGCACGCTGCTGCTCTGCCTCGTGCCGGCCATGCAGAACCTGCACACGG
CGCTGCTCGCCACGTCGCTGCACCGGCGGATCAAGGTCTCCGCCGCGCACTCCCTCGGCGTCCTGGCCGTGTCCACGCCG
CCGTCCGCCGCGCGGTTCCGCGAGGGGTACGACGCCGCCGTCGTCAAGCCGCTCCTCAGCTTCCTGCGCGCGACGGGCGC
GCCGTTCATGGTGAACGCGTACCCGTTCTACGGCCTCACCAGCGACGCCGAGCTCGACTTCGCGCTGTTCCGGGTGAGCG
CCGAGGGCGTCACGGACGCAGGCACCGGGCTGGTGTATACCAACGCGCTGGACGCGCAGCTCGACGCCGTGCACTCGGCG
ATGAAGCGGCTCGGCTTCGGCGACGTCGACGTCGTCGTGGCCGAGACCGGGTGGCCGTGGGCCGGGGAGGACTGGGAGGT
CGGCGCGGGCGCGGACCACGCCGGGGACTACAACAGGAACGCCATCCGCCACCTCGGGTCCGGCGTGGGCACCCCGCTCA
TGCCGAACCGCGCCTTCGAGGTCTCCATCTTCTCCCTCTTCGACGAGAACCTGAAGCCCGGCCCGATGTCCGAGCATCAC
TTCGGCCTGTTCCACGCCGACATGACGCCGATCTACGACGCCGGCATCCTCACCGCTCCGGAGGTATTTAATTCGTGCCA
GCATCGGTTCTACACGCCGCTCTTTTTCACAGTGATGTTAACTAGCCACATTGCGGGCGTGCAGTCCGTTGGGCCGGTGA
GCGCCAAGGTAACACCGGCGGCGCCGGCGCCGGCGCCAGACGCGGGAGCGGCGGACTCGGGCGGGCGGCAGTGGTGCGTG
CCGACGCCAGCAGCGGACGCGGCGGTGCTGCAGGAGAACATCGACTTCGTGTGCGGAGGGGGCATGGGCTGTGGTCCGAT
ACGGCCGGGCGGCCGCTGCTACGAGCCGGACACTGTGCAGGCCCACGCGGCGTACGCCATGAACCTCTATTTTCGGAGCA
ACGGGCAGCATGCGTTCGACTGCGATTTCGGTCGCACCGGCGTCGTTACCACTGTTGACCCAAGTAAGGCTTCTTCCTAC
TCC-------------------------TATGCTTCTTCTACGTGAAGAAATATTTCAGCTGGATCGATCTTGTCTCTAA
TTA---CACGGCCACATACTCTGTTTTACCATGGCAGGTTTTGGAAGTTGCAACTTTACATAA-----------------
--------------------------------------------------------------------------------
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------------------------------------------
>chr2B_1_TraesCS2B01G459400
AAAAGTTTACCGAAAGTACAAAGCATCTCAAACATTATAAAAATTACAACGAGGTGTTGAAGTCTCGTGCACGTGCAAGG
ATCAACACCACAAAAAGCCGTAGTCATCGCCATTAAACCCTTGAATTGATCTAAAAGAAATATGACACCAAATATCGTCT
TCGCGTATGCACAAGTAAAAACCTAACTTCAGCACCCTGAGGAGCTAGCAGGACTCTACGCCGAAGGTCTGTTTAATCCG
TCCCAATGAACGAACTTGAAGGAGGATTAGAGTCTGAAAGACTGACTCAAAGAAAAAATGCTGCCATCTG--CTAGCGTC
GATCATGCGAGGACTAAAACCCTAATCAATCTAATAGCCGAAGCCGAGGCACCAGGATTCCCTCCCGGACACTGGCTGTC
AAAGCGGCAAGCAGAAGGGATGCGAGTTCACGGGCTCGGTTGCAGAGACGGAGGGGAGGAAGGCTTGCCATAGTCACTTT
GTGCCAGGGGAAGGTATAGTCTGTAAATGAAGATAAATTCAACTTCATTTCGAGCTGTGGGATAAGACCATGTAACTGAC
ACGCCGATGGTCTTTCC---ATAATATCTTGCTTTCGAGTGATTCTCTCCATTGGTCATAGGCACGGTTGCTGCGATTCT
CTCCATTGTCATAGGCACGGTTGCTGTGTGGGG------ATCTTCCATTGGAGTTGTCAGCGTCCACCAGCAGTGTGTGT
CAAGAAAGGGACAAAGCTAGCATGCATCGCAAGGTAGAACAAACTATG--GCCAAGGAAAGAACATGTTCATGCGTATAG
CTCAGAGCCAAAGAAAAGAATCTTCTT-CGGTTAGCAACCATCTCAAGTCATACTCCAGAAATAAGTAAATAACCACACT
GCAAATCACTCCTCAGTACTT---GTAACTACACACTGCTCGTCTTTCTTTGTTGATAAAAGGAT----CTCTCCCCGAT
TTCAT---CACACATCACTCGACTACT-GCTGCTGCACTGAAGCGGCATACGGTAGTAGAAGACGATGCACGCGCCGATG
TTGATCCTCCTGCTGTCGTCGATCGCCGCGGCGGAAGCGGCCGGCATCGGCGTCACCTACGGCAGGCGAGCGACGAGCCT
CCCGGCGCCGGCCGACGTCGCGCGGTTCCTCGCCCGCGGCACCGTCCTCGACCGCGTGAGGCTCCTGAACGCCGACCCGC
TCGCCCTGCGTGCCTTCGCCGGCATGGGCCTCTCCGTGGACGTCACCGTCCCGAACGCCCTCGTGCCGCGCATCGCCGAC
AGCGTCGCCTTCGCTCGGCAGTGGGTGCGCGACAGCGTCGCACCCCACGCGGCGGCCGGGACCAACGTATCGAGGATCCT
CGTGGGCCGCGACGTGATCTCGCAGGCCAACCGCACGCTGCTGCTCTGCCTCGTGCCGGCCATGCAGAACCTGCACACGG
CGCTGCTCGCCACGTCGCTGCACCGGCGGATCAAGGTCTCCGCCGCGCACTCCCTCGGCGTCCTGGCCGTGTCCACGCCG
CCGTCCGCCGCGCGGTTCCGCGAGGGGTACGACGCCGCCGTCGTCAAGCCGCTCCTCAGCTTCCTGCGCGCGACGGGCGC
GCCGTTCATGGTGAACGCGTACCCGTTCTACGGCCTCACCAGCGACGCCGAGCTCGACTTCGCGCTGTTCCGGGTGAGCG
CCGAGGGCGTCACGGACGCAGGCACCGGGCTGGTGTATACCAACGCGCTGGACGCGCAGCTCGACGCCGTGCACTCGGCG
ATGAAGCGGCTCGGCTTCGGCGACGTCGACGTCGTCGTGGCCGAGACCGGGTGGCCGTGGGCCGGGGAGGACTGGGAGGT
CGGCGCGGGCGCGGACCACGCCGGGGACTACAACAGGAACGCCATCCGCCACCTCGGGTCCGGCGTGGGCACCCCGCTCA
TGCCGAACCGCGCCTTCGAGGTCTCCATCTTCTCCCTCTTCGACGAGAACCTGAAGCCCGGCCCGATGTCCGAGCATCAC
TTCGGCCTGTTCCACGCCGACATGACGCCGATCTACGACGCCGGCATCCTCACCGCTCCGGAGGTATTTAATTCGTGCCA
GCATCGGTTCTACACGCCGCTCTTTTTCACAGTGATGTTAACTAGCCACATTGCGGGCGTGCAGTCCGTTGGGCCGGTGA
GCGCCAAGGTAACACCGGCGGCGCCGGCGCCGGCGCCAGACGCGGGAGCGGCGGACTCGGGCGGGCGGCAGTGGTGCGTG
CCGACGCCAGCAGCGGACGCGGCGGTGCTGCAGGAGAACATCGACTTCGTGTGCGGAGGGGGCATGGGCTGTGGTCCGAT
ACGGCCGGGCGGCCGCTGCTACGAGCCGGACACTGTGCAGGCCCACGCGGCGTACGCCATGAACCTCTATTTTCGGAGCA
ACGGGCAGCATGCGTTCGACTGCGATTTCGGTCGCACCGGCGTCGTTACCACTGTTGACCCAAGTAAGGCTTCTTCCTAC
TCC-------------------------TATGCTTCTTCTACGTGAAGAAATATTTCAGCTGGATCGATCTTGTCTCTAA
TTA---CACGGCCACATACTCTGTTTTACCATGGCAGGTTTTGGAAGTTGCAACTTTACATAATGAGGGCGTACTTTACT
TGGCAAGAAGCAGGAAGAC-TTGT-CATTGTGTTTGGTGCTCAACATGTTTCTTATGCAGTTTTGTTTGTCAAACTTATT
AGAAGA--------------------------------------------------------------------------
------------------------------------------------------------------------------CG
AAACAAAATGTTTTTAGATCCTTAAATTGTTGCATGGTTACATTTGGTGTCCCAACTTATTTCTTATACATTTTTGTCCT
CATGTTTGTCAAATTTGCGAGTTTGACCTATTTGAGTTATGGGAT-GGGGGAGCTTTGGACGTGTCCACGGACCACGGGC
ATTTGAGA------------------------AGATGTCTTTAGGGCCAGTGATGCCCCAAAAGCCATATTTAGGGAGAA
AATATCTGGT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TTGGGGGATTAACCCTTAGCTAACATATCCCTCAGACACTTCGTCCCTTAAAATTATAG-TTTTTTATCCCA
AAAAGGCACCATGTAGCTTGT-TTTTGCTCTAAGAAGGGCAACTCTTAGCAAAAATTGGGAGACCGAATTGCCCCTCTCG
ACCTCCAGCCGCGCCGCCAAAGAGCCCTCGACGTCAGAATCAGTCCGCGCAGGCCCCCTCCCATAGCCCCACTGTCGGTG
TCAAAATCGGCGGATCTCGGGTAGGGGGTCCCGAACTGTGCGTCTAGGCGGATGGTAACAGGAGACAAGGGACACGATGT
TTTACCCAGGTTTGGGCCCTCTTGATGGAGGTAAAACCCTACGTCCTGCTTGATTGATATTGATATTGTGGATGTTTACA
AGAGTGGATCTACCACGAGATCAAGGAGGCTAAACCCTAGAAGCTAGCCTATGGTATGATTGTAATGGTTGTTGTTGTGT
CCTACGGACTAGAGCCATCCGGTTTATATAGACACCGGAGAGGGCTAGGGTTACATAGAGTCGGTTACAATGGTAGGAGA
TCTACGTATCCGTATCGCCAAGCTTGCCTTCCACGCCAAGGAAAGTCCCATCCGGACACGGGACGAAGTCTTCAATCTTG
TATCTTCATAGTCTTGGAGTCCGGTCGATGATGATAGTCCGG
>chr2A_1
AAAAGTTTACCGAAAGTACAAAGCATCTCAAACATTATAAAAATTACAACGAGGTGTTGAAGTCTCGTGCACGTGCAAGG
ATCGACACCAC-AAAAGCCATAGTCATCGACATTAAAACCTTGAATTGATCTAAAAGAAATATGACACCAAATCTCGTCT
TCGCGTATGCACAAGTAAAAACCTAACTTCAGCACCCCGAGGAGGTAGCAGGACTCTACACCGAAGGTCTGCTTAATCCA
TTCCGATGAACGAACTTGAAGGAGGATTGGAGTCTGTAAGACTGACTCGAAGAAAAAGTGCTGCCATCTGTCCTAGCGTA
GATCCTGCGAGGACTAAAACCCTAATCAATCTAATAGCCGAAGCCGAGGCATCAGGATTCCCACCCTGACATTGGCCATC
AGAGCGGCAAGTAGAAGGGATGCGAATTCATAGGCTCGGTCGCGAAGACCGAGGGGAGGAAGGCTTTCCATAGTCACTTT
GTGCGAGGGGAAGGTATATTCCGCAAATGAAGAGAAATTCAACTTCATTTCGAGCTGTGGGATAGGACCATGCAACTGAC
ACGCCGATGGTCTTTCAAAAATAGTATCTTGCTTTCTAGTC----------------------------------ATTCT
CTCCATTGTGATAGGCACGGTTGCTGTGTGGGAATCTTCATCTCCCATCGGAATTGTCAGCGTCAATTCGCAGTGTGCGT
CAAGAAAGGGACAAAGCTAGCATGCATCGCAAGGTAGAACAAAATAGAGAGCCAAGGAAAGAACATGTTCATGCGTATAG
CTCAGAGCCAAAGAAAAGAATCTTGTT-CGGTTAGCAACCCTCTCAAGCCATACTCCAGAAATAAGTAAATAACCACAGT
GCAAATCACTCCTCAGTGCTACTAGTAACTGCACACTGCTCGTCTTTCTTTGTTGATAAAAGGAT----CTCTCCCCGAT
TTCTT---CACACATCACTCGACTACT-GCTGCTGAACTGAAGCGGCATACGGTAGTCGACGACGATGCACGCGCCGATG
TTGATCCTCCTGCTGTCGTCGATCGCCGCGGCGGACGCGGCCGGCATCGGCGTCACCTACGGCAGGCGGGCGACGAGCCT
CCCGCCGCCGGCCGACGTCGCGCGGTTCCTCGCCCGCGGCACCGTCCTCGACCGCGTCAGGCTCCTGAACGCCGACCCGC
TCGCCCTGCGCGCCTTCGCCGGCATGGGCCTCGCCGTGGACGTCACCGTCCCGAACGCCCTCGTGCCGCGCGTCGCCGAC
AGCGTCGCCTTCGCTCGGCAGTGGGTGCGCGACAGCGTCGCGCCCCACGCGGCGGCCGGGACCAACGTGTCGCGGATCCT
CGTGGGCCGCGACGTCATCTCGCAGGCCAACCGCACGCTGCTGCTCTGCCTCGTGCCGGCCATGCAGAACCTGCACGCGG
CCCTGCTCGCCACGTCGCTGCACCGGCAGATCAAGGTCTCCGCCGCGCACTCCCTCGGCGTCCTCGCCGTGTCCACGCCG
CCGTCCGCCGCGCGGTTCCGTGAGGGGTACGACGCCGCCGTCGTCAAGCCGCTCCTCGCCTTCCTGCGCGCGACGGGCGC
GCCCTTCATGGTGAACGCGTACCCGTTCTACGGCCTCACCAGCGACGCGGGGCTCGACTTCGCGCTGTTCAGGGTGGGCG
CCGAGGGCGTCACGGACGCCGGCACCGGGCTGGTGTACACCAACGCGCTGGACGCGCAGCTCGACGCCGTGCACTCGGCG
ATGGAGCGGCTCGGCTTTGGTGACGTCGACGTCGTCGTGGCCGAGACCGGGTGGCCGTGGGCCGGGGAGGACTGGGAGGT
CGGCGCGGGCGCGGACCACGCCGGGGACTACAACAGGAACGCCATCCGCCACCTCGGGTCCGGCGTGGGCACGCCGCTCA
TGCCCAACCGCACCTTCGAGGTCTCCATCTTCTCCCTCTTCGACGAGAACCTGAAGCCCGGCCCGATGTCCGAGCATCAC
TTCGGCCTGTTCCACGCCGACATGACGCCGATCTACGACGCCGGGATCCTCACCGCTCCGGAGGTAATTCATTCGTGCCA
CCATCGGTTCTACACTCCGCTCTTTCTCACGGTGATGTTAACTAGCCACATTGCGTGCGTGCAGTCCGTTGGGCCGGTGA
GCTCCAAGGTAACACCGGCGGCGCCGGCGCCGGTGCCAGACGCAGGAGCGGCGGACTCGGGCGGTCGGCACTGGTGCGTG
CCGACGCCGGCAGCGGACGCGGCGGTGCTGCAGGAGAACATCGACTTCGTGTGCGGAGGGGGCATGGACTGTGGTCCGAT
ACGGCCGGGCGGGCGCTGCTACGAGCCGGACACGGTCCAGGCCCACGCGGCGTACGCCATGAACCTCTATTTTCGGAGCA
ACGGGCAGCACGCGTTCGACTGCGACTTCGGTCGCACCGGCGTCGTCACCACCGTTGACCCAAGTAAGACTTCTTCCTCC
TCT-------------------------TCTTCTTCTACGCCAAG------TATTTCAGCTGGATCGATCTTGTCTCTAA
TTATTACACGGCGACATACTCTGTTTTTCCATGGCAGGTTTTGGAAGTTGCAACTTTACATA--GAGGGCGTACTGTACT
TGGCAAGAAGCGACATGAC-TTGT-CATTGTGTTTGGTGTCCAGCATGTTTCTCATGCAACTTTGTCTGTCAAATTAGAA
GACGAAAGAAACGAAACTGCTCTATGACAAAACATGGACAATGTGTGGACGACAACAAATCCAACTGCCGTTGCACCGCT
GTGGGCATGCATGTGTGCGGCCAGATTATCACTGTCGTTCATGAGTTGTCTGATTTTGTCGTCCGTATAGCAATGTTGTG
AAACAAAATGTTTTTAGAACCTTAAATTGTTGCATGGTTACATCTGGTGTCCCAACTTATTTCTTATACATTTTTGTCCT
CATGTTTGTCAAATTTGCGAGTTTGACCTATTTGAGTTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT
GGTGGTGGTTTGGGGATTAACCCTTAGGTAGCATATCCCTCAGACACTTTGTCCCTCAAAATTATAG-CTTTTTGTCCCA
AAGAGGCACCATGTAGCTTGT-TTTTGCTCTAAGAAGGGCAATTCTCAGCAAAAAATGGGAGACCGAATTGCCCCTCTCG
ACCTCCAACCGTGCCGCCAAAGAGCCATCAACGTCAGAATCAGTCCGCGCAGGCCCCCTCCCACATCCCCAC--------
--------------------------------------------------------------------------------
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>chr2D_630
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--------------------------------------------------------------------------GATTCT
CTCCATTGTCATAGGCACGGTTGCTGTGTGGGG------ATCTTCCATTGGAGTTGTCAGCGTCCATCAGCAGTGTGTGC
CAAGAAAGGGACAAAGCTAGCATGCATCGCAAGGTAGAACAAACTATG--GCCAAGGAAAGAACATGTTCATGCGTATAG
CTCAGAGCCAAAGAAAAGAATCTTCTTACGGTTAGCAACCCTCTCAAGTCATACTCCAGAAATT--------ACCACACT
GCACTGGCATCACACCTCTAGTAC-TAACTGCACATCGCTCGTCATATTTTGTTGATAAATGGATCGATCTCTCCTCCAT
TCCATTGACACACACCACTCCACTGCTAGCTACTGAACTGAAGCAGCATCCGGTGGTCGACGACGATGCACGCGCCGATG
TTGATCCTCCTGCTGTCGTCGATCGCCGCGGCGGACGCGGCCGGCATCGGCGTCACCTACGGCAGGCGAGCGACGAGCCT
CCCGCCGCCGGCGGACGTCGCGCGGTTCCTCGCCCGCGGCACCGTCCTCGACCGCGTGAGGCTCCTGAACGCCGACCCGC
TCGCGCTGCGTGCCTTCGCCGGCATGGGCCTTGCCGTGGACGTCACCGTCCCGAACGCCCTCGTGCCGCGCGTCGCCGAC
AGCGTCGCCTTCGCAAGGCAGTGGGTGCGCGACAGCGTCGCGCCCCACGCAGCGGCCGGGACCAACGTGTCGCGGATCCT
CGTGGGCCGCGACGTCATCTCGCAGGCCAACCGGACGCTGCTGCTCTGCCTCGTGCCGGCCATGCAGAACCTGCACGCGG
CGCTGCTCGCCACGTCGCTGCACCGGCGGATCAAGGTCTCCGCCGCGCACTCCCTCGGCGTCCTGGCCGTGTCCACGCCG
CCGTCCGCCGCGCGGTTCCGCGAGGGGTACGACGCCGCCGTCGTCAAGCCGCTCCTCGGCTTCCTGCGCGCGACGGGCGC
GCCGTTCATGGTGAACGCGTACCCGTTCTACGGCCTCACCAGCGACGCCGAGCTCGACTTCGCGCTGTTCAGGGTGGGCG
CCGAAGGCGTCACGGACGCCGGCACCGGGCTGGTGTACACCAACGCGCTGGACGCGCAGCTCGACGCCGTGCACTCGGCG
ATGAAGCGGCTCGGCTTCGGCGACGTCGACGTTGTCGTGGCCGAGACAGGGTGGCCGTGGGCTGGGGAGGACTGGGAGAT
CGGCGCCGGCGTTGACCACGCCGGGGACTACAACAGGAACGCCATCCGCCACCTCGGGTCCGGCGTGGGCACGCCGCTCA
TGCCGAACCGCACCTTCGAGGTCTCCATCTTCTCCCTCTTCGACGAGAACCTCAAGCCCGGCCCGATGTCCGAGCATCAC
TTCGGCCTGTTCCACGCCGACATGACGCCGATCTACGACGCCGGCATCCTCACCGCTCCGGAGGTAATTCATTCGTGACA
CCATCGGTTCTACACTCCGCTCTTTTTCACAGTGATGTTAACTAGCCACATTGCGGGCGTGCAGTCCGTTGGGCCGGTGA
GCGCCAAGGTAACACCGGCGGCGCCGGCGCCGGCGCCAGACGCGGGAGCGGCGGACTCGGGCGGGCGGCAGTGGTGCGTG
CCGACGCCAGCGGCGGACGCGGCGGTGCTGCAGGAGAACATCGACTTCGTGTGCGGAGGGGGCATGGACTGTGGTCCGAT
ACGGCCGGGCGGGCGCTGCTACGAGCCGGACACGGTGCAGGCCCACGCGGCGTACGCCATGAACCTCTATTTTCGGAGCA
ATGGGCAGCATGCGTTCGACTGCGATTTCGGTCGCACCGGCGTCGTTACCACTGTTGACCCAAGTAAGATTTCTTCTTTC
TCTCTCAAAAAAAAGTAAGATTTCTTCTTCTTCTTCTAAGTGAAG------TGTTTCAGCTGGATCGACCTTGTCTCTAA
TTA---CACGGCGACACACTCTGTTTTTCCATGGCAGGTTTTGGAAGTTGCAACTTTACATAAGGAGGG-----TGTACT
TGGCAAGAAGCAAGAAGAC-TTTGCCATTGTGTTTGGTGCTCAACATGTTTCTTATGCAACTTTGTTTGTCAAATTTATT
AGAAGG--------------------------------------------------------------------------
------------------------------------------------------------------------------CG
AAACAAAATGTTTTTAGACCCTTAAGTTGTTGCATGGTTGCATTTGGTGTGCCAACTTATTTTCTATATATTTTTGTCCT
CTTGTTTGTTAAATTTGCGGGTTTTGACTGTTTGAACTACGGGAT-GGGT-AGCCTTGGACGTGTCCGCGGATAC-----
--TTGAGA------------------------AGTTGTCTTTAGGGCTAGAGATACCCCAAAAGTCATATTTAGGGAGAA
AATTTCTGAT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TTGGGGGATTAACACTTAGCTAGCATATCCCTCAAACACTTTGTCCCTCAAAATTACAGTTTTTTTATTCCA
AAAAGGCATCATGTGGCTTGTGTTTTGCTCTGAGAAGGGCAACTCTCACCAAAAGTTGGGAGACCAAACTGCCCCTCACG
ACCTCCAGCCGCGCCGCCACAGAGCCATCAACGTCAGAATCAGTCC----------------------------------
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>chr2D_2594
--------------------------------------------------------------------------------
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------GAAGCAAGAAGACTTTGT-CATTTTGTTTGGTGCTCAACATGTTTCTTATGCAACTTTGTTTACCAAATTTATT
AAAAGA--------------------------------------------------------------------------
------------------------------------------------------------------------------TG
AAACAAAATG-TTTTAGACCCTTAAGTTGTTCCATGGTTACACTTGGTGTCCCAACTTATTTCCTATACATTTTTGTCCT
TGTGTTCCTCAAATTTGCGAGTTTGAACTGTCTGAATTAGGGGATGGGGT-AGCCTTGGATGTGTTCGTGGACAT-----
--TTGAGACTATTCGTTTAAAGATAGCCTTGGAGATGTCCTTAGGTCT-GAGATGCCCCAAAAGTCATATTTAAGGGGGG
AAAT--TGGT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TTGGGGTATTAACCCTTAGCTAGCATATCCCTCAAACATTAA-TCCTTCAAAATTATAG-TTTTTTATCCCA
AAAAGGCACCATGTAGCTAGT-TTTTGCTCCAAGAAGGGCAACTCTCGGCAAAAATTGGGATATCGCGCTGCCCCTCTCG
GCATCTAGCCGCGCCGCCAAAGAGCCCTGGATGTCGGAATCAGTATGTGCAGCCCCCCTCTCACAGCCC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------
>SNPs
--------------------------------------------------------------------------------
---S-------S-------S---------S-------S-----------------------------------S------
-------------------------------------S------S--------------S-----------S-------S
-S--S-----------------------S-------S-----------S--------S---------------------S
----S----------------------------------------------S----------S---S----S----SS--
-S---------S-------------S----SS--------S--SS----S----------------S-------------
----S-------------S--S-S---------S------------------------------S-------S-------
----------------S------S------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
-----------------S--S---------S-------------------------------------------------
-----------------------------------S---------------------S--S-------------------
-----------------------------------S--------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------S--------------------------------------S--------
-----------------------------------------S--------------------------S---S-------
---------------S------------------------------------------------------------S---
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
----------------------------------------------------------------------S-----S---
-------------------S-----------------S------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
-----------S--------------------------------------------------------------------
------------------------------------------------------------------S--S----------
S--------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
------------S--------------------S----------------------------------------------
--------------------------------------------------------------------S---------S-
--S--------------------------S-S-----S-SS-SS-SSSSSS-----------------------------
------------S--------------S-----------------------------------S-----------S----
------------S----------------------------------------------SS-------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
---------------------------------------S---------SS---S------------S-----SSSSSSS
SS---------------------------------------------S--S-------------S---------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S------------------S------S-----------------------
----------------------------------------------S---------------------------------
---------------------------------------------------------------S--------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_628
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CCATTGGTCATAGGCACGGT------------
--------------------------------------------------------------------------------
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>reverse_1932
--------------------------------------------------------------------------------
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-----------GCCTTCGAGGTCTCCATCTT-------------------------------------------------
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>forward_707
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------TTGGAGTTGTCAGCGTCCAC-------------
--------------------------------------------------------------------------------
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------------------------------------------
>reverse_2096
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------GCCGCTCTTTTTCACAGTGA---------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>forward_996
--------------------------------------------------------------------------------
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----------------CACTCGACTACTGCTGCTGC--------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>reverse_3088
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------CAGTGATGCCCCAAAAGCCA-------------
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------------------------------------------
