Multiple sequence alignment - TraesCS2B01G459000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G459000 chr2B 100.000 2990 0 0 1 2990 653609681 653612670 0.000000e+00 5522.0
1 TraesCS2B01G459000 chr2B 89.758 1279 82 35 837 2087 653619114 653620371 0.000000e+00 1591.0
2 TraesCS2B01G459000 chr2D 92.364 1506 70 16 613 2087 546871763 546873254 0.000000e+00 2102.0
3 TraesCS2B01G459000 chr2D 91.659 1091 72 14 981 2056 546931937 546933023 0.000000e+00 1493.0
4 TraesCS2B01G459000 chr2D 89.610 770 80 0 1162 1931 555133412 555134181 0.000000e+00 979.0
5 TraesCS2B01G459000 chr2D 87.821 624 33 22 1 614 546870833 546871423 0.000000e+00 691.0
6 TraesCS2B01G459000 chr2D 87.841 477 58 0 1455 1931 547251527 547252003 7.240000e-156 560.0
7 TraesCS2B01G459000 chr2D 83.959 293 35 6 2524 2816 546873403 546873683 1.370000e-68 270.0
8 TraesCS2B01G459000 chr2D 92.638 163 12 0 2198 2360 106145648 106145486 4.980000e-58 235.0
9 TraesCS2B01G459000 chr2D 90.476 63 6 0 2086 2148 546873286 546873348 1.910000e-12 84.2
10 TraesCS2B01G459000 chr2A 93.010 1445 60 19 661 2081 689710893 689709466 0.000000e+00 2071.0
11 TraesCS2B01G459000 chr2A 94.237 1180 53 10 916 2081 690409571 690410749 0.000000e+00 1788.0
12 TraesCS2B01G459000 chr2A 92.204 1039 72 7 997 2029 689631503 689630468 0.000000e+00 1461.0
13 TraesCS2B01G459000 chr2A 92.642 299 11 5 1 297 689711610 689711321 1.280000e-113 420.0
14 TraesCS2B01G459000 chr2A 89.591 269 19 6 659 925 690409000 690409261 1.720000e-87 333.0
15 TraesCS2B01G459000 chr2A 83.333 300 37 8 2524 2820 690410905 690411194 6.360000e-67 265.0
16 TraesCS2B01G459000 chr2A 86.000 250 30 5 997 1242 690534370 690534618 2.290000e-66 263.0
17 TraesCS2B01G459000 chr2A 83.000 300 37 9 2524 2820 689709307 689709019 2.960000e-65 259.0
18 TraesCS2B01G459000 chr2A 87.556 225 19 5 2141 2360 686176302 686176522 4.950000e-63 252.0
19 TraesCS2B01G459000 chr2A 85.047 214 24 6 2149 2360 17976095 17975888 8.400000e-51 211.0
20 TraesCS2B01G459000 chr2A 93.617 94 5 1 2818 2911 78805762 78805670 4.020000e-29 139.0
21 TraesCS2B01G459000 chr2A 77.255 255 28 19 348 593 689711160 689710927 4.050000e-24 122.0
22 TraesCS2B01G459000 chr2A 83.471 121 19 1 2402 2522 413337980 413337861 8.760000e-21 111.0
23 TraesCS2B01G459000 chr2A 82.540 126 21 1 2397 2522 186725561 186725437 3.150000e-20 110.0
24 TraesCS2B01G459000 chr2A 97.959 49 1 0 299 347 689711296 689711248 5.310000e-13 86.1
25 TraesCS2B01G459000 chr2A 86.420 81 6 4 129 208 689632104 689632028 1.910000e-12 84.2
26 TraesCS2B01G459000 chr2A 90.625 64 5 1 2088 2151 689709425 689709363 1.910000e-12 84.2
27 TraesCS2B01G459000 chr2A 90.625 64 5 1 2088 2151 690410790 690410852 1.910000e-12 84.2
28 TraesCS2B01G459000 chr2A 100.000 31 0 0 559 589 690408929 690408959 1.160000e-04 58.4
29 TraesCS2B01G459000 chr4A 90.461 1258 85 15 839 2087 33079204 33080435 0.000000e+00 1626.0
30 TraesCS2B01G459000 chr4A 94.643 56 3 0 292 347 33065709 33065764 1.480000e-13 87.9
31 TraesCS2B01G459000 chr6D 92.814 167 12 0 2198 2364 263436414 263436580 2.980000e-60 243.0
32 TraesCS2B01G459000 chr6D 92.638 163 12 0 2198 2360 69292806 69292644 4.980000e-58 235.0
33 TraesCS2B01G459000 chr6D 81.343 134 23 2 2389 2521 97770666 97770534 1.130000e-19 108.0
34 TraesCS2B01G459000 chr3D 93.252 163 11 0 2198 2360 186615357 186615195 1.070000e-59 241.0
35 TraesCS2B01G459000 chr5D 91.765 170 14 0 2198 2367 300162058 300161889 1.390000e-58 237.0
36 TraesCS2B01G459000 chr5D 92.638 163 12 0 2198 2360 485887270 485887432 4.980000e-58 235.0
37 TraesCS2B01G459000 chr5D 94.505 91 5 0 2813 2903 10524832 10524922 1.120000e-29 141.0
38 TraesCS2B01G459000 chr5D 94.231 52 1 1 2149 2200 396696990 396697039 8.890000e-11 78.7
39 TraesCS2B01G459000 chr7A 92.216 167 12 1 2198 2363 419932397 419932563 4.980000e-58 235.0
40 TraesCS2B01G459000 chr7A 94.231 52 1 1 2149 2200 223684287 223684336 8.890000e-11 78.7
41 TraesCS2B01G459000 chr1A 95.506 89 4 0 2818 2906 478354478 478354566 3.110000e-30 143.0
42 TraesCS2B01G459000 chr6B 93.617 94 6 0 2819 2912 639915408 639915315 1.120000e-29 141.0
43 TraesCS2B01G459000 chr6B 82.443 131 20 3 2391 2520 36470614 36470742 8.760000e-21 111.0
44 TraesCS2B01G459000 chr3A 95.455 88 4 0 2819 2906 21406073 21405986 1.120000e-29 141.0
45 TraesCS2B01G459000 chr3A 95.455 88 4 0 2817 2904 660055874 660055961 1.120000e-29 141.0
46 TraesCS2B01G459000 chr3A 98.077 52 0 1 2149 2200 600310132 600310082 4.110000e-14 89.8
47 TraesCS2B01G459000 chr3A 96.154 52 1 1 2148 2199 54437603 54437553 1.910000e-12 84.2
48 TraesCS2B01G459000 chr3A 91.379 58 3 1 2143 2200 104414003 104414058 8.890000e-11 78.7
49 TraesCS2B01G459000 chrUn 89.524 105 7 3 2804 2906 286308690 286308792 2.420000e-26 130.0
50 TraesCS2B01G459000 chrUn 89.524 105 7 3 2804 2906 286314973 286315075 2.420000e-26 130.0
51 TraesCS2B01G459000 chrUn 88.889 108 8 3 2804 2909 295781582 295781477 2.420000e-26 130.0
52 TraesCS2B01G459000 chr5B 85.714 112 14 2 2415 2526 132756564 132756673 1.880000e-22 117.0
53 TraesCS2B01G459000 chr1B 83.200 125 19 2 2399 2522 648253881 648254004 2.440000e-21 113.0
54 TraesCS2B01G459000 chr7D 82.812 128 19 3 2394 2521 614435377 614435501 8.760000e-21 111.0
55 TraesCS2B01G459000 chr6A 83.065 124 20 1 2399 2522 330471201 330471323 8.760000e-21 111.0
56 TraesCS2B01G459000 chr3B 81.955 133 21 3 2403 2534 43573875 43573745 3.150000e-20 110.0
57 TraesCS2B01G459000 chr7B 92.982 57 1 2 2144 2200 717027586 717027639 2.470000e-11 80.5
58 TraesCS2B01G459000 chr1D 94.231 52 1 1 2149 2200 348987135 348987086 8.890000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G459000 chr2B 653609681 653612670 2989 False 5522.00 5522 100.000000 1 2990 1 chr2B.!!$F1 2989
1 TraesCS2B01G459000 chr2B 653619114 653620371 1257 False 1591.00 1591 89.758000 837 2087 1 chr2B.!!$F2 1250
2 TraesCS2B01G459000 chr2D 546931937 546933023 1086 False 1493.00 1493 91.659000 981 2056 1 chr2D.!!$F1 1075
3 TraesCS2B01G459000 chr2D 555133412 555134181 769 False 979.00 979 89.610000 1162 1931 1 chr2D.!!$F3 769
4 TraesCS2B01G459000 chr2D 546870833 546873683 2850 False 786.80 2102 88.655000 1 2816 4 chr2D.!!$F4 2815
5 TraesCS2B01G459000 chr2A 689630468 689632104 1636 True 772.60 1461 89.312000 129 2029 2 chr2A.!!$R5 1900
6 TraesCS2B01G459000 chr2A 689709019 689711610 2591 True 507.05 2071 89.081833 1 2820 6 chr2A.!!$R6 2819
7 TraesCS2B01G459000 chr2A 690408929 690411194 2265 False 505.72 1788 91.557200 559 2820 5 chr2A.!!$F3 2261
8 TraesCS2B01G459000 chr4A 33079204 33080435 1231 False 1626.00 1626 90.461000 839 2087 1 chr4A.!!$F2 1248

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
882 1409 0.03601 ACCTTCCTTGCCATCAGTCG 60.036 55.0 0.0 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2221 3155 0.037232 CAGTGGGAGGAGACGTTTCC 60.037 60.0 17.16 17.16 37.52 3.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.833495 TCCCCATCATCCCGGCCA 62.833 66.667 2.24 0.00 0.00 5.36
98 100 4.868734 CGAAGACCAGTAGTATTTCCCAAC 59.131 45.833 0.00 0.00 27.50 3.77
117 119 4.662961 CAGGTGGCACGAGCACGA 62.663 66.667 11.40 0.00 44.61 4.35
155 157 2.974698 ACGCCACAAGCAGCACTC 60.975 61.111 0.00 0.00 44.04 3.51
389 543 0.727398 GATTAGACAACGGCTGTGCC 59.273 55.000 0.00 0.00 46.75 5.01
469 624 8.265055 ACTACTGCATATAATTTGTGTGGTAGT 58.735 33.333 0.00 0.00 33.32 2.73
470 625 9.758651 CTACTGCATATAATTTGTGTGGTAGTA 57.241 33.333 0.00 0.00 0.00 1.82
471 626 8.662781 ACTGCATATAATTTGTGTGGTAGTAG 57.337 34.615 0.00 0.00 0.00 2.57
472 627 8.265055 ACTGCATATAATTTGTGTGGTAGTAGT 58.735 33.333 0.00 0.00 0.00 2.73
473 628 9.758651 CTGCATATAATTTGTGTGGTAGTAGTA 57.241 33.333 0.00 0.00 0.00 1.82
474 629 9.537192 TGCATATAATTTGTGTGGTAGTAGTAC 57.463 33.333 0.00 0.00 0.00 2.73
507 662 4.833478 ACTGTCTCAGGTCAAATATGCT 57.167 40.909 1.90 0.00 35.51 3.79
526 681 5.376854 TGCTCACCTTTCTAAATTTCAGC 57.623 39.130 0.00 0.00 0.00 4.26
642 1146 6.806739 GCAACATAAAGTAAGGATGAAACCAC 59.193 38.462 0.00 0.00 0.00 4.16
657 1161 9.797556 GGATGAAACCACAAAATAATACTAACC 57.202 33.333 0.00 0.00 0.00 2.85
708 1216 2.910199 TCATCCATGACAGTTAGCTGC 58.090 47.619 6.48 0.00 46.30 5.25
758 1271 3.533907 TCTTCTTCTCTATCCAGGGGAGT 59.466 47.826 0.00 0.00 34.05 3.85
760 1273 1.691434 CTTCTCTATCCAGGGGAGTGC 59.309 57.143 0.00 0.00 34.05 4.40
763 1276 2.364973 TATCCAGGGGAGTGCGCA 60.365 61.111 5.66 5.66 34.05 6.09
865 1391 2.206576 AAACCATCTCCAGCAAGACC 57.793 50.000 0.00 0.00 0.00 3.85
868 1395 1.280421 ACCATCTCCAGCAAGACCTTC 59.720 52.381 0.00 0.00 0.00 3.46
882 1409 0.036010 ACCTTCCTTGCCATCAGTCG 60.036 55.000 0.00 0.00 0.00 4.18
886 1413 0.036388 TCCTTGCCATCAGTCGGTTC 60.036 55.000 0.00 0.00 0.00 3.62
889 1416 0.107643 TTGCCATCAGTCGGTTCACA 59.892 50.000 0.00 0.00 0.00 3.58
971 1833 4.222810 ACCACAAAAACCTCAAGCTTTTCT 59.777 37.500 0.00 0.00 0.00 2.52
977 1839 4.706842 AACCTCAAGCTTTTCTACCAGA 57.293 40.909 0.00 0.00 0.00 3.86
986 1850 8.784043 TCAAGCTTTTCTACCAGATTTTTAGTC 58.216 33.333 0.00 0.00 0.00 2.59
1449 2325 4.408821 TTCTTCCAGCGCCGGCAT 62.409 61.111 28.98 11.96 43.41 4.40
1482 2358 4.767255 CTGCTGGAGACGGTGGCC 62.767 72.222 0.00 0.00 39.64 5.36
1710 2586 1.457643 CGGCTACCTCATCTCCCCA 60.458 63.158 0.00 0.00 0.00 4.96
2009 2891 5.039920 TGATCAGTTCAATGGACCATAGG 57.960 43.478 7.59 3.49 0.00 2.57
2039 2937 1.810606 CTCAGTCCACCGCTGTCACT 61.811 60.000 0.00 0.00 35.60 3.41
2056 2954 1.544691 CACTTACTACCACTGTCGCCT 59.455 52.381 0.00 0.00 0.00 5.52
2073 2971 2.142319 GCCTACGTTTGTCCCGTTAAA 58.858 47.619 0.00 0.00 39.60 1.52
2121 3055 5.652994 TTGTACCCAAAGATATGTTTGCC 57.347 39.130 17.63 7.42 36.29 4.52
2129 3063 3.560636 AGATATGTTTGCCTAAGCCGT 57.439 42.857 0.00 0.00 38.69 5.68
2136 3070 3.191791 TGTTTGCCTAAGCCGTTAATTCC 59.808 43.478 0.00 0.00 38.69 3.01
2151 3085 9.744468 GCCGTTAATTCCTGTAAATATGATTTT 57.256 29.630 0.00 0.00 0.00 1.82
2173 3107 6.606234 TTTTTAACATCAGTACAGACGCAA 57.394 33.333 0.00 0.00 0.00 4.85
2175 3109 1.714794 ACATCAGTACAGACGCAAGC 58.285 50.000 0.00 0.00 45.62 4.01
2176 3110 0.642291 CATCAGTACAGACGCAAGCG 59.358 55.000 13.50 13.50 46.03 4.68
2177 3111 1.078759 ATCAGTACAGACGCAAGCGC 61.079 55.000 15.09 0.00 44.19 5.92
2178 3112 1.734477 CAGTACAGACGCAAGCGCT 60.734 57.895 15.09 2.64 44.19 5.92
2179 3113 1.444553 AGTACAGACGCAAGCGCTC 60.445 57.895 12.06 11.06 44.19 5.03
2180 3114 1.733041 GTACAGACGCAAGCGCTCA 60.733 57.895 12.06 0.83 44.19 4.26
2181 3115 1.078759 GTACAGACGCAAGCGCTCAT 61.079 55.000 12.06 0.00 44.19 2.90
2182 3116 0.454196 TACAGACGCAAGCGCTCATA 59.546 50.000 12.06 5.16 44.19 2.15
2183 3117 0.179100 ACAGACGCAAGCGCTCATAT 60.179 50.000 12.06 0.00 44.19 1.78
2184 3118 1.067060 ACAGACGCAAGCGCTCATATA 59.933 47.619 12.06 0.00 44.19 0.86
2185 3119 2.288457 ACAGACGCAAGCGCTCATATAT 60.288 45.455 12.06 0.00 44.19 0.86
2186 3120 3.057526 ACAGACGCAAGCGCTCATATATA 60.058 43.478 12.06 0.00 44.19 0.86
2187 3121 4.108336 CAGACGCAAGCGCTCATATATAT 58.892 43.478 12.06 0.00 44.19 0.86
2188 3122 5.163652 ACAGACGCAAGCGCTCATATATATA 60.164 40.000 12.06 0.00 44.19 0.86
2189 3123 5.172232 CAGACGCAAGCGCTCATATATATAC 59.828 44.000 12.06 0.00 44.19 1.47
2190 3124 4.993905 ACGCAAGCGCTCATATATATACA 58.006 39.130 12.06 0.00 44.19 2.29
2191 3125 4.798907 ACGCAAGCGCTCATATATATACAC 59.201 41.667 12.06 0.00 44.19 2.90
2192 3126 4.086075 CGCAAGCGCTCATATATATACACG 60.086 45.833 12.06 1.08 35.30 4.49
2193 3127 4.317418 GCAAGCGCTCATATATATACACGC 60.317 45.833 12.06 19.70 45.01 5.34
2194 3128 4.632538 AGCGCTCATATATATACACGCA 57.367 40.909 24.95 0.00 46.91 5.24
2195 3129 5.188327 AGCGCTCATATATATACACGCAT 57.812 39.130 24.95 14.29 46.91 4.73
2196 3130 6.313744 AGCGCTCATATATATACACGCATA 57.686 37.500 24.95 0.00 46.91 3.14
2197 3131 6.143496 AGCGCTCATATATATACACGCATAC 58.857 40.000 24.95 7.45 46.91 2.39
2198 3132 5.912955 GCGCTCATATATATACACGCATACA 59.087 40.000 21.23 0.00 44.15 2.29
2199 3133 6.129431 GCGCTCATATATATACACGCATACAC 60.129 42.308 21.23 1.67 44.15 2.90
2200 3134 6.359883 CGCTCATATATATACACGCATACACC 59.640 42.308 0.00 0.00 0.00 4.16
2201 3135 6.359883 GCTCATATATATACACGCATACACCG 59.640 42.308 0.00 0.00 0.00 4.94
2202 3136 7.324354 TCATATATATACACGCATACACCGT 57.676 36.000 0.00 0.00 39.91 4.83
2203 3137 8.436046 TCATATATATACACGCATACACCGTA 57.564 34.615 0.00 0.00 37.12 4.02
2204 3138 8.553696 TCATATATATACACGCATACACCGTAG 58.446 37.037 0.00 0.00 37.12 3.51
2216 3150 3.900892 CCGTAGGCGCCTCGTCAT 61.901 66.667 36.73 11.27 46.14 3.06
2217 3151 2.353607 CGTAGGCGCCTCGTCATC 60.354 66.667 36.73 15.88 32.13 2.92
2218 3152 2.353607 GTAGGCGCCTCGTCATCG 60.354 66.667 36.73 0.00 32.13 3.84
2219 3153 2.515290 TAGGCGCCTCGTCATCGA 60.515 61.111 36.73 10.36 44.12 3.59
2220 3154 2.831366 TAGGCGCCTCGTCATCGAC 61.831 63.158 36.73 0.00 41.35 4.20
2239 3173 2.363297 GGAAACGTCTCCTCCCACT 58.637 57.895 0.00 0.00 32.21 4.00
2240 3174 0.037232 GGAAACGTCTCCTCCCACTG 60.037 60.000 0.00 0.00 32.21 3.66
2241 3175 0.966920 GAAACGTCTCCTCCCACTGA 59.033 55.000 0.00 0.00 0.00 3.41
2242 3176 1.343465 GAAACGTCTCCTCCCACTGAA 59.657 52.381 0.00 0.00 0.00 3.02
2243 3177 1.420430 AACGTCTCCTCCCACTGAAA 58.580 50.000 0.00 0.00 0.00 2.69
2244 3178 1.420430 ACGTCTCCTCCCACTGAAAA 58.580 50.000 0.00 0.00 0.00 2.29
2245 3179 1.070289 ACGTCTCCTCCCACTGAAAAC 59.930 52.381 0.00 0.00 0.00 2.43
2246 3180 1.797025 GTCTCCTCCCACTGAAAACG 58.203 55.000 0.00 0.00 0.00 3.60
2247 3181 1.070289 GTCTCCTCCCACTGAAAACGT 59.930 52.381 0.00 0.00 0.00 3.99
2248 3182 2.298163 GTCTCCTCCCACTGAAAACGTA 59.702 50.000 0.00 0.00 0.00 3.57
2249 3183 3.056035 GTCTCCTCCCACTGAAAACGTAT 60.056 47.826 0.00 0.00 0.00 3.06
2250 3184 3.194968 TCTCCTCCCACTGAAAACGTATC 59.805 47.826 0.00 0.00 0.00 2.24
2251 3185 2.901192 TCCTCCCACTGAAAACGTATCA 59.099 45.455 4.17 4.17 0.00 2.15
2252 3186 3.000727 CCTCCCACTGAAAACGTATCAC 58.999 50.000 0.00 0.00 0.00 3.06
2253 3187 3.000727 CTCCCACTGAAAACGTATCACC 58.999 50.000 0.00 0.00 0.00 4.02
2254 3188 1.730064 CCCACTGAAAACGTATCACCG 59.270 52.381 0.00 0.00 0.00 4.94
2255 3189 1.730064 CCACTGAAAACGTATCACCGG 59.270 52.381 0.00 0.00 0.00 5.28
2256 3190 2.610976 CCACTGAAAACGTATCACCGGA 60.611 50.000 9.46 0.00 0.00 5.14
2257 3191 3.061322 CACTGAAAACGTATCACCGGAA 58.939 45.455 9.46 0.00 0.00 4.30
2258 3192 3.495377 CACTGAAAACGTATCACCGGAAA 59.505 43.478 9.46 0.00 0.00 3.13
2259 3193 4.153475 CACTGAAAACGTATCACCGGAAAT 59.847 41.667 9.46 3.09 0.00 2.17
2260 3194 4.758165 ACTGAAAACGTATCACCGGAAATT 59.242 37.500 9.46 0.00 0.00 1.82
2261 3195 5.106830 ACTGAAAACGTATCACCGGAAATTC 60.107 40.000 9.46 0.00 0.00 2.17
2262 3196 4.998672 TGAAAACGTATCACCGGAAATTCT 59.001 37.500 9.46 0.00 0.00 2.40
2263 3197 4.939509 AAACGTATCACCGGAAATTCTG 57.060 40.909 9.46 0.00 0.00 3.02
2264 3198 3.880047 ACGTATCACCGGAAATTCTGA 57.120 42.857 9.46 0.00 0.00 3.27
2265 3199 4.196626 ACGTATCACCGGAAATTCTGAA 57.803 40.909 9.46 0.00 0.00 3.02
2266 3200 4.571919 ACGTATCACCGGAAATTCTGAAA 58.428 39.130 9.46 0.00 0.00 2.69
2267 3201 5.183228 ACGTATCACCGGAAATTCTGAAAT 58.817 37.500 9.46 0.00 0.00 2.17
2268 3202 6.342906 ACGTATCACCGGAAATTCTGAAATA 58.657 36.000 9.46 0.00 0.00 1.40
2269 3203 6.819649 ACGTATCACCGGAAATTCTGAAATAA 59.180 34.615 9.46 0.00 0.00 1.40
2270 3204 7.334921 ACGTATCACCGGAAATTCTGAAATAAA 59.665 33.333 9.46 0.00 0.00 1.40
2271 3205 8.342634 CGTATCACCGGAAATTCTGAAATAAAT 58.657 33.333 9.46 0.00 0.00 1.40
2272 3206 9.665264 GTATCACCGGAAATTCTGAAATAAATC 57.335 33.333 9.46 0.00 0.00 2.17
2273 3207 7.095695 TCACCGGAAATTCTGAAATAAATCC 57.904 36.000 9.46 0.00 0.00 3.01
2274 3208 6.661377 TCACCGGAAATTCTGAAATAAATCCA 59.339 34.615 9.46 0.00 0.00 3.41
2275 3209 6.974622 CACCGGAAATTCTGAAATAAATCCAG 59.025 38.462 9.46 0.00 0.00 3.86
2276 3210 6.096846 ACCGGAAATTCTGAAATAAATCCAGG 59.903 38.462 9.46 6.83 31.53 4.45
2277 3211 6.321181 CCGGAAATTCTGAAATAAATCCAGGA 59.679 38.462 2.89 0.00 0.00 3.86
2278 3212 7.147915 CCGGAAATTCTGAAATAAATCCAGGAA 60.148 37.037 2.89 0.00 0.00 3.36
2279 3213 8.416329 CGGAAATTCTGAAATAAATCCAGGAAT 58.584 33.333 0.00 0.00 0.00 3.01
2285 3219 7.874940 TCTGAAATAAATCCAGGAATAATGCG 58.125 34.615 0.00 0.00 0.00 4.73
2286 3220 7.719193 TCTGAAATAAATCCAGGAATAATGCGA 59.281 33.333 0.00 0.00 0.00 5.10
2287 3221 7.874940 TGAAATAAATCCAGGAATAATGCGAG 58.125 34.615 0.00 0.00 0.00 5.03
2288 3222 5.886960 ATAAATCCAGGAATAATGCGAGC 57.113 39.130 0.00 0.00 0.00 5.03
2289 3223 2.936919 ATCCAGGAATAATGCGAGCA 57.063 45.000 0.00 0.00 0.00 4.26
2290 3224 1.953559 TCCAGGAATAATGCGAGCAC 58.046 50.000 0.00 0.00 0.00 4.40
2291 3225 0.947244 CCAGGAATAATGCGAGCACC 59.053 55.000 0.00 0.00 0.00 5.01
2292 3226 1.667236 CAGGAATAATGCGAGCACCA 58.333 50.000 0.00 0.00 0.00 4.17
2293 3227 1.600957 CAGGAATAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
2294 3228 0.947244 GGAATAATGCGAGCACCAGG 59.053 55.000 0.00 0.00 0.00 4.45
2295 3229 1.475034 GGAATAATGCGAGCACCAGGA 60.475 52.381 0.00 0.00 0.00 3.86
2296 3230 1.599542 GAATAATGCGAGCACCAGGAC 59.400 52.381 0.00 0.00 0.00 3.85
2297 3231 0.833287 ATAATGCGAGCACCAGGACT 59.167 50.000 0.00 0.00 0.00 3.85
2298 3232 0.613260 TAATGCGAGCACCAGGACTT 59.387 50.000 0.00 0.00 0.00 3.01
2299 3233 0.674895 AATGCGAGCACCAGGACTTC 60.675 55.000 0.00 0.00 0.00 3.01
2300 3234 1.830587 ATGCGAGCACCAGGACTTCA 61.831 55.000 0.00 0.00 0.00 3.02
2301 3235 1.301716 GCGAGCACCAGGACTTCAA 60.302 57.895 0.00 0.00 0.00 2.69
2302 3236 1.569479 GCGAGCACCAGGACTTCAAC 61.569 60.000 0.00 0.00 0.00 3.18
2303 3237 0.951040 CGAGCACCAGGACTTCAACC 60.951 60.000 0.00 0.00 0.00 3.77
2304 3238 0.606673 GAGCACCAGGACTTCAACCC 60.607 60.000 0.00 0.00 0.00 4.11
2305 3239 1.062488 AGCACCAGGACTTCAACCCT 61.062 55.000 0.00 0.00 0.00 4.34
2309 3243 3.329300 CAGGACTTCAACCCTGGTG 57.671 57.895 0.00 0.00 44.68 4.17
2310 3244 0.250901 CAGGACTTCAACCCTGGTGG 60.251 60.000 0.00 0.00 44.68 4.61
2311 3245 0.401395 AGGACTTCAACCCTGGTGGA 60.401 55.000 0.00 0.00 38.00 4.02
2312 3246 0.250770 GGACTTCAACCCTGGTGGAC 60.251 60.000 0.00 0.00 38.00 4.02
2313 3247 0.765510 GACTTCAACCCTGGTGGACT 59.234 55.000 0.00 0.00 38.00 3.85
2314 3248 0.474184 ACTTCAACCCTGGTGGACTG 59.526 55.000 0.00 0.00 38.00 3.51
2315 3249 0.250901 CTTCAACCCTGGTGGACTGG 60.251 60.000 0.00 0.00 38.00 4.00
2320 3254 4.829388 CCTGGTGGACTGGGGATA 57.171 61.111 0.00 0.00 34.73 2.59
2321 3255 2.221918 CCTGGTGGACTGGGGATAC 58.778 63.158 0.00 0.00 34.73 2.24
2337 3271 2.699321 GGATACCACTGTCCCTCTAACC 59.301 54.545 0.00 0.00 0.00 2.85
2338 3272 3.371965 GATACCACTGTCCCTCTAACCA 58.628 50.000 0.00 0.00 0.00 3.67
2339 3273 2.344093 ACCACTGTCCCTCTAACCAT 57.656 50.000 0.00 0.00 0.00 3.55
2340 3274 2.188817 ACCACTGTCCCTCTAACCATC 58.811 52.381 0.00 0.00 0.00 3.51
2341 3275 1.486726 CCACTGTCCCTCTAACCATCC 59.513 57.143 0.00 0.00 0.00 3.51
2342 3276 2.187958 CACTGTCCCTCTAACCATCCA 58.812 52.381 0.00 0.00 0.00 3.41
2343 3277 2.571653 CACTGTCCCTCTAACCATCCAA 59.428 50.000 0.00 0.00 0.00 3.53
2344 3278 2.572104 ACTGTCCCTCTAACCATCCAAC 59.428 50.000 0.00 0.00 0.00 3.77
2345 3279 2.571653 CTGTCCCTCTAACCATCCAACA 59.428 50.000 0.00 0.00 0.00 3.33
2346 3280 2.983192 TGTCCCTCTAACCATCCAACAA 59.017 45.455 0.00 0.00 0.00 2.83
2347 3281 3.244770 TGTCCCTCTAACCATCCAACAAC 60.245 47.826 0.00 0.00 0.00 3.32
2348 3282 2.983192 TCCCTCTAACCATCCAACAACA 59.017 45.455 0.00 0.00 0.00 3.33
2349 3283 3.591527 TCCCTCTAACCATCCAACAACAT 59.408 43.478 0.00 0.00 0.00 2.71
2350 3284 3.696051 CCCTCTAACCATCCAACAACATG 59.304 47.826 0.00 0.00 0.00 3.21
2351 3285 4.335416 CCTCTAACCATCCAACAACATGT 58.665 43.478 0.00 0.00 0.00 3.21
2352 3286 4.766891 CCTCTAACCATCCAACAACATGTT 59.233 41.667 4.92 4.92 42.08 2.71
2360 3294 3.957383 AACAACATGTTGGTTCGCC 57.043 47.368 35.20 0.00 44.45 5.54
2361 3295 1.398692 AACAACATGTTGGTTCGCCT 58.601 45.000 35.20 15.22 44.45 5.52
2362 3296 0.667993 ACAACATGTTGGTTCGCCTG 59.332 50.000 35.20 14.08 44.45 4.85
2363 3297 0.667993 CAACATGTTGGTTCGCCTGT 59.332 50.000 27.60 0.00 36.95 4.00
2364 3298 1.876799 CAACATGTTGGTTCGCCTGTA 59.123 47.619 27.60 0.00 36.95 2.74
2365 3299 2.264005 ACATGTTGGTTCGCCTGTAA 57.736 45.000 0.00 0.00 38.36 2.41
2366 3300 2.577700 ACATGTTGGTTCGCCTGTAAA 58.422 42.857 0.00 0.00 38.36 2.01
2367 3301 3.153919 ACATGTTGGTTCGCCTGTAAAT 58.846 40.909 0.00 0.00 38.36 1.40
2368 3302 4.328536 ACATGTTGGTTCGCCTGTAAATA 58.671 39.130 0.00 0.00 38.36 1.40
2369 3303 4.155280 ACATGTTGGTTCGCCTGTAAATAC 59.845 41.667 0.00 0.00 38.36 1.89
2370 3304 2.737783 TGTTGGTTCGCCTGTAAATACG 59.262 45.455 0.00 0.00 38.36 3.06
2371 3305 2.995258 GTTGGTTCGCCTGTAAATACGA 59.005 45.455 0.00 0.00 38.36 3.43
2372 3306 3.530265 TGGTTCGCCTGTAAATACGAT 57.470 42.857 0.00 0.00 38.36 3.73
2373 3307 3.864243 TGGTTCGCCTGTAAATACGATT 58.136 40.909 0.00 0.00 38.36 3.34
2374 3308 4.255301 TGGTTCGCCTGTAAATACGATTT 58.745 39.130 0.00 0.00 38.36 2.17
2375 3309 4.093703 TGGTTCGCCTGTAAATACGATTTG 59.906 41.667 0.00 0.00 38.36 2.32
2376 3310 4.330620 GGTTCGCCTGTAAATACGATTTGA 59.669 41.667 0.00 0.00 34.07 2.69
2379 3313 7.254522 GGTTCGCCTGTAAATACGATTTGATTA 60.255 37.037 0.00 0.00 34.07 1.75
2383 3317 7.792508 CGCCTGTAAATACGATTTGATTACTTC 59.207 37.037 0.00 0.00 0.00 3.01
2518 3456 5.351458 CAAAACTTTTTGGGACAGAGGAAG 58.649 41.667 6.55 0.00 42.81 3.46
2519 3457 3.953542 ACTTTTTGGGACAGAGGAAGT 57.046 42.857 0.00 0.00 42.39 3.01
2520 3458 5.382664 AACTTTTTGGGACAGAGGAAGTA 57.617 39.130 0.00 0.00 42.39 2.24
2522 3460 5.316987 ACTTTTTGGGACAGAGGAAGTATG 58.683 41.667 0.00 0.00 42.39 2.39
2578 3516 5.673337 GCAATATGCATACTTTCCTCGAA 57.327 39.130 8.99 0.00 44.26 3.71
2613 3551 6.442952 CCACCAAAACATCTCATCGTTAAAA 58.557 36.000 0.00 0.00 0.00 1.52
2663 3601 5.048504 ACTTGCATATTGACAGGTTGTTGAG 60.049 40.000 0.00 0.00 0.00 3.02
2664 3602 4.650734 TGCATATTGACAGGTTGTTGAGA 58.349 39.130 0.00 0.00 0.00 3.27
2674 3613 8.062065 TGACAGGTTGTTGAGAAAAATAACTT 57.938 30.769 0.00 0.00 33.22 2.66
2676 3615 7.193595 ACAGGTTGTTGAGAAAAATAACTTCG 58.806 34.615 0.00 0.00 33.22 3.79
2698 3637 7.716768 TCGTATATGCTCTCCGATCTATTAG 57.283 40.000 0.00 0.00 0.00 1.73
2705 3644 7.526142 TGCTCTCCGATCTATTAGTATTTGT 57.474 36.000 0.00 0.00 0.00 2.83
2706 3645 7.371159 TGCTCTCCGATCTATTAGTATTTGTG 58.629 38.462 0.00 0.00 0.00 3.33
2707 3646 7.230712 TGCTCTCCGATCTATTAGTATTTGTGA 59.769 37.037 0.00 0.00 0.00 3.58
2744 3683 7.965718 AGATGAATGATCTTAAAGAGAGAGGG 58.034 38.462 0.00 0.00 38.35 4.30
2745 3684 7.788867 AGATGAATGATCTTAAAGAGAGAGGGA 59.211 37.037 0.00 0.00 38.35 4.20
2746 3685 7.358770 TGAATGATCTTAAAGAGAGAGGGAG 57.641 40.000 0.00 0.00 37.93 4.30
2747 3686 7.128751 TGAATGATCTTAAAGAGAGAGGGAGA 58.871 38.462 0.00 0.00 37.93 3.71
2748 3687 7.287466 TGAATGATCTTAAAGAGAGAGGGAGAG 59.713 40.741 0.00 0.00 37.93 3.20
2749 3688 6.334378 TGATCTTAAAGAGAGAGGGAGAGA 57.666 41.667 0.00 0.00 37.93 3.10
2750 3689 6.364701 TGATCTTAAAGAGAGAGGGAGAGAG 58.635 44.000 0.00 0.00 37.93 3.20
2751 3690 6.159575 TGATCTTAAAGAGAGAGGGAGAGAGA 59.840 42.308 0.00 0.00 37.93 3.10
2757 3696 2.951642 GAGAGAGGGAGAGAGATGTGTG 59.048 54.545 0.00 0.00 0.00 3.82
2760 3699 1.480137 GAGGGAGAGAGATGTGTGTGG 59.520 57.143 0.00 0.00 0.00 4.17
2782 3721 4.888823 GGTAGTTGGGTTTAACCTTGACAA 59.111 41.667 14.27 6.76 38.64 3.18
2801 3740 9.952188 CTTGACAATAATCTATCTCTACGACAA 57.048 33.333 0.00 0.00 0.00 3.18
2816 3755 9.326413 TCTCTACGACAAAAAGAGAAAAATCTT 57.674 29.630 0.00 0.00 42.04 2.40
2817 3756 9.587461 CTCTACGACAAAAAGAGAAAAATCTTC 57.413 33.333 0.00 0.00 38.59 2.87
2821 3760 9.110502 ACGACAAAAAGAGAAAAATCTTCTACT 57.889 29.630 0.00 0.00 38.59 2.57
2822 3761 9.587461 CGACAAAAAGAGAAAAATCTTCTACTC 57.413 33.333 0.00 0.00 38.59 2.59
2823 3762 9.885934 GACAAAAAGAGAAAAATCTTCTACTCC 57.114 33.333 0.00 0.00 38.59 3.85
2824 3763 8.851145 ACAAAAAGAGAAAAATCTTCTACTCCC 58.149 33.333 0.00 0.00 38.59 4.30
2825 3764 9.072375 CAAAAAGAGAAAAATCTTCTACTCCCT 57.928 33.333 0.00 0.00 38.59 4.20
2826 3765 8.856153 AAAAGAGAAAAATCTTCTACTCCCTC 57.144 34.615 0.00 0.00 38.59 4.30
2827 3766 7.806680 AAGAGAAAAATCTTCTACTCCCTCT 57.193 36.000 0.00 0.00 34.37 3.69
2828 3767 7.181569 AGAGAAAAATCTTCTACTCCCTCTG 57.818 40.000 0.00 0.00 0.00 3.35
2829 3768 6.728632 AGAGAAAAATCTTCTACTCCCTCTGT 59.271 38.462 0.00 0.00 0.00 3.41
2830 3769 7.896496 AGAGAAAAATCTTCTACTCCCTCTGTA 59.104 37.037 0.00 0.00 0.00 2.74
2831 3770 8.437274 AGAAAAATCTTCTACTCCCTCTGTAA 57.563 34.615 0.00 0.00 0.00 2.41
2832 3771 8.881262 AGAAAAATCTTCTACTCCCTCTGTAAA 58.119 33.333 0.00 0.00 0.00 2.01
2833 3772 9.674068 GAAAAATCTTCTACTCCCTCTGTAAAT 57.326 33.333 0.00 0.00 0.00 1.40
2878 3817 9.733219 ATCACTAAAGTAGTAATCTAAACGCTC 57.267 33.333 0.00 0.00 37.23 5.03
2879 3818 8.954350 TCACTAAAGTAGTAATCTAAACGCTCT 58.046 33.333 0.00 0.00 37.23 4.09
2880 3819 9.570488 CACTAAAGTAGTAATCTAAACGCTCTT 57.430 33.333 0.00 0.00 37.23 2.85
2893 3832 8.385789 TCTAAACGCTCTTATGTTAGTTTACG 57.614 34.615 0.00 0.00 34.29 3.18
2894 3833 6.399204 AAACGCTCTTATGTTAGTTTACGG 57.601 37.500 0.00 0.00 31.14 4.02
2895 3834 5.314923 ACGCTCTTATGTTAGTTTACGGA 57.685 39.130 0.00 0.00 0.00 4.69
2896 3835 5.338365 ACGCTCTTATGTTAGTTTACGGAG 58.662 41.667 0.00 0.00 0.00 4.63
2897 3836 4.738740 CGCTCTTATGTTAGTTTACGGAGG 59.261 45.833 0.00 0.00 0.00 4.30
2898 3837 5.048507 GCTCTTATGTTAGTTTACGGAGGG 58.951 45.833 0.00 0.00 0.00 4.30
2899 3838 5.163478 GCTCTTATGTTAGTTTACGGAGGGA 60.163 44.000 0.00 0.00 0.00 4.20
2900 3839 6.461110 TCTTATGTTAGTTTACGGAGGGAG 57.539 41.667 0.00 0.00 0.00 4.30
2901 3840 5.954150 TCTTATGTTAGTTTACGGAGGGAGT 59.046 40.000 0.00 0.00 0.00 3.85
2902 3841 7.118723 TCTTATGTTAGTTTACGGAGGGAGTA 58.881 38.462 0.00 0.00 0.00 2.59
2903 3842 7.781693 TCTTATGTTAGTTTACGGAGGGAGTAT 59.218 37.037 0.00 0.00 0.00 2.12
2904 3843 6.803366 ATGTTAGTTTACGGAGGGAGTATT 57.197 37.500 0.00 0.00 0.00 1.89
2905 3844 7.902920 ATGTTAGTTTACGGAGGGAGTATTA 57.097 36.000 0.00 0.00 0.00 0.98
2906 3845 7.100458 TGTTAGTTTACGGAGGGAGTATTAC 57.900 40.000 0.00 0.00 0.00 1.89
2907 3846 4.907879 AGTTTACGGAGGGAGTATTACG 57.092 45.455 0.00 0.00 0.00 3.18
2908 3847 4.273318 AGTTTACGGAGGGAGTATTACGT 58.727 43.478 0.00 0.00 38.23 3.57
2909 3848 5.437060 AGTTTACGGAGGGAGTATTACGTA 58.563 41.667 0.00 0.00 35.97 3.57
2910 3849 5.885912 AGTTTACGGAGGGAGTATTACGTAA 59.114 40.000 11.02 11.02 42.64 3.18
2911 3850 6.547510 AGTTTACGGAGGGAGTATTACGTAAT 59.452 38.462 23.36 23.36 43.41 1.89
2912 3851 6.959639 TTACGGAGGGAGTATTACGTAATT 57.040 37.500 24.81 9.11 40.47 1.40
2913 3852 5.192327 ACGGAGGGAGTATTACGTAATTG 57.808 43.478 24.81 7.58 32.30 2.32
2914 3853 3.985925 CGGAGGGAGTATTACGTAATTGC 59.014 47.826 24.81 17.47 0.00 3.56
2915 3854 4.313282 GGAGGGAGTATTACGTAATTGCC 58.687 47.826 24.81 20.99 0.00 4.52
2916 3855 4.202284 GGAGGGAGTATTACGTAATTGCCA 60.202 45.833 24.81 5.29 0.00 4.92
2917 3856 5.512576 GGAGGGAGTATTACGTAATTGCCAT 60.513 44.000 24.81 19.57 0.00 4.40
2918 3857 5.937111 AGGGAGTATTACGTAATTGCCATT 58.063 37.500 24.81 12.75 0.00 3.16
2919 3858 7.069877 AGGGAGTATTACGTAATTGCCATTA 57.930 36.000 24.81 3.44 0.00 1.90
2920 3859 7.511268 AGGGAGTATTACGTAATTGCCATTAA 58.489 34.615 24.81 2.70 0.00 1.40
2921 3860 7.660208 AGGGAGTATTACGTAATTGCCATTAAG 59.340 37.037 24.81 2.58 32.32 1.85
2922 3861 7.094933 GGGAGTATTACGTAATTGCCATTAAGG 60.095 40.741 24.81 0.01 41.84 2.69
2923 3862 7.094933 GGAGTATTACGTAATTGCCATTAAGGG 60.095 40.741 24.81 0.60 38.09 3.95
2924 3863 7.284820 AGTATTACGTAATTGCCATTAAGGGT 58.715 34.615 24.81 0.05 38.09 4.34
2925 3864 8.431222 AGTATTACGTAATTGCCATTAAGGGTA 58.569 33.333 24.81 0.00 38.09 3.69
2926 3865 9.054922 GTATTACGTAATTGCCATTAAGGGTAA 57.945 33.333 24.81 12.10 36.94 2.85
2927 3866 7.934855 TTACGTAATTGCCATTAAGGGTAAA 57.065 32.000 13.65 6.35 36.10 2.01
2928 3867 6.837471 ACGTAATTGCCATTAAGGGTAAAA 57.163 33.333 13.65 2.87 36.10 1.52
2929 3868 7.229581 ACGTAATTGCCATTAAGGGTAAAAA 57.770 32.000 13.65 2.52 36.10 1.94
2930 3869 7.092079 ACGTAATTGCCATTAAGGGTAAAAAC 58.908 34.615 13.65 12.74 36.10 2.43
2931 3870 7.039574 ACGTAATTGCCATTAAGGGTAAAAACT 60.040 33.333 13.65 2.40 36.10 2.66
2932 3871 7.486870 CGTAATTGCCATTAAGGGTAAAAACTC 59.513 37.037 13.65 3.23 36.10 3.01
2933 3872 7.553504 AATTGCCATTAAGGGTAAAAACTCT 57.446 32.000 13.65 0.00 36.10 3.24
2934 3873 6.584185 TTGCCATTAAGGGTAAAAACTCTC 57.416 37.500 7.24 0.00 38.09 3.20
2935 3874 5.887754 TGCCATTAAGGGTAAAAACTCTCT 58.112 37.500 8.16 0.00 38.09 3.10
2936 3875 5.944007 TGCCATTAAGGGTAAAAACTCTCTC 59.056 40.000 8.16 0.00 38.09 3.20
2937 3876 5.357314 GCCATTAAGGGTAAAAACTCTCTCC 59.643 44.000 8.16 0.00 38.09 3.71
2938 3877 5.585047 CCATTAAGGGTAAAAACTCTCTCCG 59.415 44.000 0.00 0.00 0.00 4.63
2939 3878 5.813513 TTAAGGGTAAAAACTCTCTCCGT 57.186 39.130 0.00 0.00 0.00 4.69
2940 3879 3.957591 AGGGTAAAAACTCTCTCCGTC 57.042 47.619 0.00 0.00 0.00 4.79
2941 3880 2.566279 AGGGTAAAAACTCTCTCCGTCC 59.434 50.000 0.00 0.00 0.00 4.79
2942 3881 2.354503 GGGTAAAAACTCTCTCCGTCCC 60.355 54.545 0.00 0.00 0.00 4.46
2943 3882 2.301009 GGTAAAAACTCTCTCCGTCCCA 59.699 50.000 0.00 0.00 0.00 4.37
2944 3883 2.545537 AAAAACTCTCTCCGTCCCAC 57.454 50.000 0.00 0.00 0.00 4.61
2945 3884 1.420430 AAAACTCTCTCCGTCCCACA 58.580 50.000 0.00 0.00 0.00 4.17
2946 3885 1.420430 AAACTCTCTCCGTCCCACAA 58.580 50.000 0.00 0.00 0.00 3.33
2947 3886 1.645710 AACTCTCTCCGTCCCACAAT 58.354 50.000 0.00 0.00 0.00 2.71
2948 3887 2.526888 ACTCTCTCCGTCCCACAATA 57.473 50.000 0.00 0.00 0.00 1.90
2949 3888 3.033659 ACTCTCTCCGTCCCACAATAT 57.966 47.619 0.00 0.00 0.00 1.28
2950 3889 4.180377 ACTCTCTCCGTCCCACAATATA 57.820 45.455 0.00 0.00 0.00 0.86
2951 3890 4.543689 ACTCTCTCCGTCCCACAATATAA 58.456 43.478 0.00 0.00 0.00 0.98
2952 3891 4.585162 ACTCTCTCCGTCCCACAATATAAG 59.415 45.833 0.00 0.00 0.00 1.73
2953 3892 3.895656 TCTCTCCGTCCCACAATATAAGG 59.104 47.826 0.00 0.00 0.00 2.69
2954 3893 3.641906 CTCTCCGTCCCACAATATAAGGT 59.358 47.826 0.00 0.00 0.00 3.50
2955 3894 3.640029 TCTCCGTCCCACAATATAAGGTC 59.360 47.826 0.00 0.00 0.00 3.85
2956 3895 2.363038 TCCGTCCCACAATATAAGGTCG 59.637 50.000 0.00 0.00 0.00 4.79
2957 3896 2.132762 CGTCCCACAATATAAGGTCGC 58.867 52.381 0.00 0.00 0.00 5.19
2958 3897 2.223971 CGTCCCACAATATAAGGTCGCT 60.224 50.000 0.00 0.00 0.00 4.93
2959 3898 3.740141 CGTCCCACAATATAAGGTCGCTT 60.740 47.826 0.00 0.00 0.00 4.68
2960 3899 3.560068 GTCCCACAATATAAGGTCGCTTG 59.440 47.826 0.00 0.00 0.00 4.01
2961 3900 3.452990 TCCCACAATATAAGGTCGCTTGA 59.547 43.478 0.00 0.00 0.00 3.02
2962 3901 4.080807 TCCCACAATATAAGGTCGCTTGAA 60.081 41.667 0.00 0.00 0.00 2.69
2963 3902 4.638421 CCCACAATATAAGGTCGCTTGAAA 59.362 41.667 0.00 0.00 0.00 2.69
2964 3903 5.124776 CCCACAATATAAGGTCGCTTGAAAA 59.875 40.000 0.00 0.00 0.00 2.29
2965 3904 6.349777 CCCACAATATAAGGTCGCTTGAAAAA 60.350 38.462 0.00 0.00 0.00 1.94
2966 3905 6.526674 CCACAATATAAGGTCGCTTGAAAAAC 59.473 38.462 0.00 0.00 0.00 2.43
2967 3906 7.305474 CACAATATAAGGTCGCTTGAAAAACT 58.695 34.615 0.00 0.00 0.00 2.66
2968 3907 7.807907 CACAATATAAGGTCGCTTGAAAAACTT 59.192 33.333 0.00 0.00 0.00 2.66
2969 3908 9.005777 ACAATATAAGGTCGCTTGAAAAACTTA 57.994 29.630 0.00 0.00 0.00 2.24
2973 3912 8.788325 ATAAGGTCGCTTGAAAAACTTATAGT 57.212 30.769 0.00 0.00 30.43 2.12
2974 3913 6.481954 AGGTCGCTTGAAAAACTTATAGTG 57.518 37.500 0.00 0.00 0.00 2.74
2975 3914 5.411669 AGGTCGCTTGAAAAACTTATAGTGG 59.588 40.000 0.00 0.00 0.00 4.00
2976 3915 5.410439 GGTCGCTTGAAAAACTTATAGTGGA 59.590 40.000 0.00 0.00 0.00 4.02
2977 3916 6.304882 GTCGCTTGAAAAACTTATAGTGGAC 58.695 40.000 0.00 0.00 0.00 4.02
2978 3917 5.119588 TCGCTTGAAAAACTTATAGTGGACG 59.880 40.000 0.00 0.00 0.00 4.79
2979 3918 5.628134 GCTTGAAAAACTTATAGTGGACGG 58.372 41.667 0.00 0.00 0.00 4.79
2980 3919 5.410439 GCTTGAAAAACTTATAGTGGACGGA 59.590 40.000 0.00 0.00 0.00 4.69
2981 3920 6.402226 GCTTGAAAAACTTATAGTGGACGGAG 60.402 42.308 0.00 0.00 0.00 4.63
2982 3921 5.484715 TGAAAAACTTATAGTGGACGGAGG 58.515 41.667 0.00 0.00 0.00 4.30
2983 3922 4.482952 AAAACTTATAGTGGACGGAGGG 57.517 45.455 0.00 0.00 0.00 4.30
2984 3923 3.393426 AACTTATAGTGGACGGAGGGA 57.607 47.619 0.00 0.00 0.00 4.20
2985 3924 2.946785 ACTTATAGTGGACGGAGGGAG 58.053 52.381 0.00 0.00 0.00 4.30
2986 3925 2.244252 ACTTATAGTGGACGGAGGGAGT 59.756 50.000 0.00 0.00 0.00 3.85
2987 3926 3.461085 ACTTATAGTGGACGGAGGGAGTA 59.539 47.826 0.00 0.00 0.00 2.59
2988 3927 2.660670 ATAGTGGACGGAGGGAGTAG 57.339 55.000 0.00 0.00 0.00 2.57
2989 3928 1.293062 TAGTGGACGGAGGGAGTAGT 58.707 55.000 0.00 0.00 0.00 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 0.034896 ACTTGACCATTCTTCGCCGT 59.965 50.000 0.00 0.00 0.00 5.68
155 157 1.672356 CCCTGCGAACTTGACCTGG 60.672 63.158 0.00 0.00 0.00 4.45
234 269 4.719369 ACGTCGTCGCCAGCTTCC 62.719 66.667 0.99 0.00 41.18 3.46
235 270 2.717809 GAACGTCGTCGCCAGCTTC 61.718 63.158 0.00 0.00 41.18 3.86
236 271 2.733593 GAACGTCGTCGCCAGCTT 60.734 61.111 0.00 0.00 41.18 3.74
237 272 4.719369 GGAACGTCGTCGCCAGCT 62.719 66.667 11.20 0.00 41.18 4.24
293 328 4.076394 AGTCTCTGTCTGGTTGACTAGTC 58.924 47.826 16.32 16.32 45.54 2.59
389 543 1.523258 CAGAGCGGCATCTTCCTGG 60.523 63.158 1.45 0.00 0.00 4.45
390 544 2.178890 GCAGAGCGGCATCTTCCTG 61.179 63.158 1.45 0.88 0.00 3.86
391 545 2.188994 GCAGAGCGGCATCTTCCT 59.811 61.111 1.45 0.00 0.00 3.36
393 547 2.899339 GGGCAGAGCGGCATCTTC 60.899 66.667 1.45 0.00 43.60 2.87
394 548 3.694058 CTGGGCAGAGCGGCATCTT 62.694 63.158 1.45 0.00 43.60 2.40
395 549 4.172512 CTGGGCAGAGCGGCATCT 62.173 66.667 1.45 0.00 43.60 2.90
469 624 8.138928 TGAGACAGTTGTACCTACTAGTACTA 57.861 38.462 1.89 1.89 42.58 1.82
470 625 7.013823 TGAGACAGTTGTACCTACTAGTACT 57.986 40.000 0.00 0.00 42.58 2.73
471 626 6.315891 CCTGAGACAGTTGTACCTACTAGTAC 59.684 46.154 0.00 0.00 42.47 2.73
472 627 6.013032 ACCTGAGACAGTTGTACCTACTAGTA 60.013 42.308 1.89 1.89 0.00 1.82
473 628 5.222089 ACCTGAGACAGTTGTACCTACTAGT 60.222 44.000 0.00 0.00 0.00 2.57
474 629 5.254901 ACCTGAGACAGTTGTACCTACTAG 58.745 45.833 0.00 0.00 0.00 2.57
507 662 6.205464 CAGACTGCTGAAATTTAGAAAGGTGA 59.795 38.462 0.00 0.00 45.17 4.02
526 681 0.593128 CCCCGCAAAAAGACAGACTG 59.407 55.000 0.00 0.00 0.00 3.51
617 1121 6.806739 GTGGTTTCATCCTTACTTTATGTTGC 59.193 38.462 0.00 0.00 0.00 4.17
652 1156 7.012894 TGTGTGGTTCAGTTCAAAATAGGTTAG 59.987 37.037 0.00 0.00 0.00 2.34
653 1157 6.829298 TGTGTGGTTCAGTTCAAAATAGGTTA 59.171 34.615 0.00 0.00 0.00 2.85
654 1158 5.654650 TGTGTGGTTCAGTTCAAAATAGGTT 59.345 36.000 0.00 0.00 0.00 3.50
657 1161 7.026631 TCTTGTGTGGTTCAGTTCAAAATAG 57.973 36.000 0.00 0.00 0.00 1.73
687 1191 3.054875 AGCAGCTAACTGTCATGGATGAA 60.055 43.478 0.00 0.00 46.30 2.57
733 1242 4.717280 TCCCCTGGATAGAGAAGAAGAAAC 59.283 45.833 0.00 0.00 0.00 2.78
865 1391 0.036010 ACCGACTGATGGCAAGGAAG 60.036 55.000 0.00 0.00 0.00 3.46
868 1395 0.321564 TGAACCGACTGATGGCAAGG 60.322 55.000 0.00 0.00 0.00 3.61
882 1409 3.380004 TGTTGGTGTTGATCTTGTGAACC 59.620 43.478 0.00 0.00 0.00 3.62
886 1413 4.898829 TTCTGTTGGTGTTGATCTTGTG 57.101 40.909 0.00 0.00 0.00 3.33
889 1416 5.829924 AGTGATTTCTGTTGGTGTTGATCTT 59.170 36.000 0.00 0.00 0.00 2.40
971 1833 6.203338 GGTGTTGAACGACTAAAAATCTGGTA 59.797 38.462 0.00 0.00 0.00 3.25
977 1839 4.641094 TGGTGGTGTTGAACGACTAAAAAT 59.359 37.500 0.00 0.00 37.62 1.82
986 1850 0.238289 GCTCATGGTGGTGTTGAACG 59.762 55.000 0.00 0.00 0.00 3.95
1422 2298 0.036858 GCTGGAAGAAGAGGTCGCTT 60.037 55.000 0.00 0.00 34.07 4.68
1462 2338 2.031012 CACCGTCTCCAGCAGCAA 59.969 61.111 0.00 0.00 0.00 3.91
2009 2891 1.520342 GGACTGAGCAGGCATCGAC 60.520 63.158 5.59 0.00 38.52 4.20
2039 2937 1.739466 CGTAGGCGACAGTGGTAGTAA 59.261 52.381 0.00 0.00 41.33 2.24
2056 2954 5.757320 TCTCAAATTTAACGGGACAAACGTA 59.243 36.000 0.00 0.00 44.83 3.57
2119 3053 2.640184 ACAGGAATTAACGGCTTAGGC 58.360 47.619 0.00 0.00 37.82 3.93
2120 3054 6.937436 ATTTACAGGAATTAACGGCTTAGG 57.063 37.500 0.00 0.00 0.00 2.69
2121 3055 9.268268 TCATATTTACAGGAATTAACGGCTTAG 57.732 33.333 0.00 0.00 0.00 2.18
2151 3085 5.333798 GCTTGCGTCTGTACTGATGTTAAAA 60.334 40.000 19.48 10.58 0.00 1.52
2152 3086 4.151689 GCTTGCGTCTGTACTGATGTTAAA 59.848 41.667 19.48 12.39 0.00 1.52
2156 3090 1.714794 GCTTGCGTCTGTACTGATGT 58.285 50.000 19.48 0.00 0.00 3.06
2157 3091 0.642291 CGCTTGCGTCTGTACTGATG 59.358 55.000 15.57 15.57 0.00 3.07
2158 3092 1.078759 GCGCTTGCGTCTGTACTGAT 61.079 55.000 16.38 0.00 0.00 2.90
2159 3093 1.733041 GCGCTTGCGTCTGTACTGA 60.733 57.895 16.38 0.00 0.00 3.41
2160 3094 1.678269 GAGCGCTTGCGTCTGTACTG 61.678 60.000 13.26 0.00 45.69 2.74
2161 3095 1.444553 GAGCGCTTGCGTCTGTACT 60.445 57.895 13.26 3.73 45.69 2.73
2162 3096 1.078759 ATGAGCGCTTGCGTCTGTAC 61.079 55.000 13.26 0.00 45.69 2.90
2163 3097 0.454196 TATGAGCGCTTGCGTCTGTA 59.546 50.000 13.26 6.26 45.69 2.74
2164 3098 0.179100 ATATGAGCGCTTGCGTCTGT 60.179 50.000 13.26 7.66 45.69 3.41
2165 3099 1.770957 TATATGAGCGCTTGCGTCTG 58.229 50.000 13.26 0.00 45.69 3.51
2166 3100 2.732412 ATATATGAGCGCTTGCGTCT 57.268 45.000 13.26 13.17 45.69 4.18
2167 3101 5.034797 TGTATATATATGAGCGCTTGCGTC 58.965 41.667 13.26 12.36 45.69 5.19
2168 3102 4.798907 GTGTATATATATGAGCGCTTGCGT 59.201 41.667 13.26 3.24 45.69 5.24
2169 3103 4.086075 CGTGTATATATATGAGCGCTTGCG 60.086 45.833 13.26 10.90 45.69 4.85
2170 3104 4.317418 GCGTGTATATATATGAGCGCTTGC 60.317 45.833 13.26 0.00 40.37 4.01
2171 3105 4.798387 TGCGTGTATATATATGAGCGCTTG 59.202 41.667 25.22 8.31 43.34 4.01
2172 3106 4.993905 TGCGTGTATATATATGAGCGCTT 58.006 39.130 25.22 0.00 43.34 4.68
2173 3107 4.632538 TGCGTGTATATATATGAGCGCT 57.367 40.909 25.22 11.27 43.34 5.92
2174 3108 5.912955 TGTATGCGTGTATATATATGAGCGC 59.087 40.000 21.68 21.68 43.26 5.92
2175 3109 6.359883 GGTGTATGCGTGTATATATATGAGCG 59.640 42.308 5.44 7.64 0.00 5.03
2176 3110 6.359883 CGGTGTATGCGTGTATATATATGAGC 59.640 42.308 5.44 6.15 0.00 4.26
2177 3111 7.415229 ACGGTGTATGCGTGTATATATATGAG 58.585 38.462 5.44 0.00 0.00 2.90
2178 3112 7.324354 ACGGTGTATGCGTGTATATATATGA 57.676 36.000 5.44 0.00 0.00 2.15
2179 3113 7.801783 CCTACGGTGTATGCGTGTATATATATG 59.198 40.741 5.44 0.00 0.00 1.78
2180 3114 7.521099 GCCTACGGTGTATGCGTGTATATATAT 60.521 40.741 0.00 0.00 0.00 0.86
2181 3115 6.238456 GCCTACGGTGTATGCGTGTATATATA 60.238 42.308 0.00 0.00 0.00 0.86
2182 3116 5.449588 GCCTACGGTGTATGCGTGTATATAT 60.450 44.000 0.00 0.00 0.00 0.86
2183 3117 4.142622 GCCTACGGTGTATGCGTGTATATA 60.143 45.833 0.00 0.00 0.00 0.86
2184 3118 3.366679 GCCTACGGTGTATGCGTGTATAT 60.367 47.826 0.00 0.00 0.00 0.86
2185 3119 2.030893 GCCTACGGTGTATGCGTGTATA 60.031 50.000 0.00 0.00 0.00 1.47
2186 3120 1.269413 GCCTACGGTGTATGCGTGTAT 60.269 52.381 0.00 0.00 0.00 2.29
2187 3121 0.101040 GCCTACGGTGTATGCGTGTA 59.899 55.000 0.00 0.00 0.00 2.90
2188 3122 1.153706 GCCTACGGTGTATGCGTGT 60.154 57.895 0.00 0.00 0.00 4.49
2189 3123 2.228241 CGCCTACGGTGTATGCGTG 61.228 63.158 15.37 0.00 40.33 5.34
2190 3124 2.103538 CGCCTACGGTGTATGCGT 59.896 61.111 15.37 0.00 40.33 5.24
2192 3126 2.965462 GGCGCCTACGGTGTATGC 60.965 66.667 22.15 0.00 40.57 3.14
2193 3127 1.299926 GAGGCGCCTACGGTGTATG 60.300 63.158 32.97 0.00 40.57 2.39
2194 3128 2.842256 CGAGGCGCCTACGGTGTAT 61.842 63.158 32.97 3.02 40.57 2.29
2195 3129 3.511595 CGAGGCGCCTACGGTGTA 61.512 66.667 32.97 0.00 40.57 2.90
2197 3131 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
2199 3133 3.825833 GATGACGAGGCGCCTACGG 62.826 68.421 34.97 27.37 40.57 4.02
2200 3134 2.353607 GATGACGAGGCGCCTACG 60.354 66.667 32.97 32.67 44.07 3.51
2201 3135 2.353607 CGATGACGAGGCGCCTAC 60.354 66.667 32.97 23.37 42.66 3.18
2202 3136 2.515290 TCGATGACGAGGCGCCTA 60.515 61.111 32.97 15.35 43.81 3.93
2220 3154 1.080025 GTGGGAGGAGACGTTTCCG 60.080 63.158 18.59 0.00 42.29 4.30
2221 3155 0.037232 CAGTGGGAGGAGACGTTTCC 60.037 60.000 17.16 17.16 37.52 3.13
2222 3156 0.966920 TCAGTGGGAGGAGACGTTTC 59.033 55.000 0.00 0.00 0.00 2.78
2223 3157 1.420430 TTCAGTGGGAGGAGACGTTT 58.580 50.000 0.00 0.00 0.00 3.60
2224 3158 1.420430 TTTCAGTGGGAGGAGACGTT 58.580 50.000 0.00 0.00 0.00 3.99
2225 3159 1.070289 GTTTTCAGTGGGAGGAGACGT 59.930 52.381 0.00 0.00 0.00 4.34
2226 3160 1.797025 GTTTTCAGTGGGAGGAGACG 58.203 55.000 0.00 0.00 0.00 4.18
2227 3161 1.070289 ACGTTTTCAGTGGGAGGAGAC 59.930 52.381 0.00 0.00 0.00 3.36
2228 3162 1.420430 ACGTTTTCAGTGGGAGGAGA 58.580 50.000 0.00 0.00 0.00 3.71
2229 3163 3.056107 TGATACGTTTTCAGTGGGAGGAG 60.056 47.826 0.00 0.00 0.00 3.69
2230 3164 2.901192 TGATACGTTTTCAGTGGGAGGA 59.099 45.455 0.00 0.00 0.00 3.71
2231 3165 3.000727 GTGATACGTTTTCAGTGGGAGG 58.999 50.000 0.00 0.00 0.00 4.30
2232 3166 3.000727 GGTGATACGTTTTCAGTGGGAG 58.999 50.000 0.00 0.00 0.00 4.30
2233 3167 2.610976 CGGTGATACGTTTTCAGTGGGA 60.611 50.000 0.00 0.00 0.00 4.37
2234 3168 1.730064 CGGTGATACGTTTTCAGTGGG 59.270 52.381 0.00 0.00 0.00 4.61
2235 3169 1.730064 CCGGTGATACGTTTTCAGTGG 59.270 52.381 0.00 0.00 0.00 4.00
2236 3170 2.679450 TCCGGTGATACGTTTTCAGTG 58.321 47.619 0.00 0.00 0.00 3.66
2237 3171 3.389925 TTCCGGTGATACGTTTTCAGT 57.610 42.857 0.00 0.00 0.00 3.41
2238 3172 4.939509 ATTTCCGGTGATACGTTTTCAG 57.060 40.909 0.00 0.00 0.00 3.02
2239 3173 4.998672 AGAATTTCCGGTGATACGTTTTCA 59.001 37.500 0.00 0.00 0.00 2.69
2240 3174 5.121142 TCAGAATTTCCGGTGATACGTTTTC 59.879 40.000 0.00 0.00 0.00 2.29
2241 3175 4.998672 TCAGAATTTCCGGTGATACGTTTT 59.001 37.500 0.00 0.00 0.00 2.43
2242 3176 4.571919 TCAGAATTTCCGGTGATACGTTT 58.428 39.130 0.00 0.00 0.00 3.60
2243 3177 4.196626 TCAGAATTTCCGGTGATACGTT 57.803 40.909 0.00 0.00 0.00 3.99
2244 3178 3.880047 TCAGAATTTCCGGTGATACGT 57.120 42.857 0.00 0.00 0.00 3.57
2245 3179 5.734855 ATTTCAGAATTTCCGGTGATACG 57.265 39.130 0.00 0.00 0.00 3.06
2246 3180 9.665264 GATTTATTTCAGAATTTCCGGTGATAC 57.335 33.333 0.00 0.00 0.00 2.24
2247 3181 8.846211 GGATTTATTTCAGAATTTCCGGTGATA 58.154 33.333 0.00 0.00 0.00 2.15
2248 3182 7.341769 TGGATTTATTTCAGAATTTCCGGTGAT 59.658 33.333 0.00 0.00 0.00 3.06
2249 3183 6.661377 TGGATTTATTTCAGAATTTCCGGTGA 59.339 34.615 0.00 0.00 0.00 4.02
2250 3184 6.862209 TGGATTTATTTCAGAATTTCCGGTG 58.138 36.000 0.00 0.00 0.00 4.94
2251 3185 6.096846 CCTGGATTTATTTCAGAATTTCCGGT 59.903 38.462 0.00 0.00 30.08 5.28
2252 3186 6.321181 TCCTGGATTTATTTCAGAATTTCCGG 59.679 38.462 0.00 0.00 30.94 5.14
2253 3187 7.333528 TCCTGGATTTATTTCAGAATTTCCG 57.666 36.000 0.00 0.00 0.00 4.30
2259 3193 8.352201 CGCATTATTCCTGGATTTATTTCAGAA 58.648 33.333 0.00 0.00 0.00 3.02
2260 3194 7.719193 TCGCATTATTCCTGGATTTATTTCAGA 59.281 33.333 0.00 0.00 0.00 3.27
2261 3195 7.874940 TCGCATTATTCCTGGATTTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
2262 3196 7.522073 GCTCGCATTATTCCTGGATTTATTTCA 60.522 37.037 0.00 0.00 0.00 2.69
2263 3197 6.803807 GCTCGCATTATTCCTGGATTTATTTC 59.196 38.462 0.00 0.00 0.00 2.17
2264 3198 6.265196 TGCTCGCATTATTCCTGGATTTATTT 59.735 34.615 0.00 0.00 0.00 1.40
2265 3199 5.769662 TGCTCGCATTATTCCTGGATTTATT 59.230 36.000 0.00 0.00 0.00 1.40
2266 3200 5.182001 GTGCTCGCATTATTCCTGGATTTAT 59.818 40.000 0.00 0.00 0.00 1.40
2267 3201 4.515191 GTGCTCGCATTATTCCTGGATTTA 59.485 41.667 0.00 0.00 0.00 1.40
2268 3202 3.316308 GTGCTCGCATTATTCCTGGATTT 59.684 43.478 0.00 0.00 0.00 2.17
2269 3203 2.880890 GTGCTCGCATTATTCCTGGATT 59.119 45.455 0.00 0.00 0.00 3.01
2270 3204 2.498167 GTGCTCGCATTATTCCTGGAT 58.502 47.619 0.00 0.00 0.00 3.41
2271 3205 1.475034 GGTGCTCGCATTATTCCTGGA 60.475 52.381 0.00 0.00 0.00 3.86
2272 3206 0.947244 GGTGCTCGCATTATTCCTGG 59.053 55.000 0.00 0.00 0.00 4.45
2273 3207 1.600957 CTGGTGCTCGCATTATTCCTG 59.399 52.381 0.00 0.00 0.00 3.86
2274 3208 1.475751 CCTGGTGCTCGCATTATTCCT 60.476 52.381 0.00 0.00 0.00 3.36
2275 3209 0.947244 CCTGGTGCTCGCATTATTCC 59.053 55.000 0.00 0.00 0.00 3.01
2276 3210 1.599542 GTCCTGGTGCTCGCATTATTC 59.400 52.381 0.00 0.00 0.00 1.75
2277 3211 1.210478 AGTCCTGGTGCTCGCATTATT 59.790 47.619 0.00 0.00 0.00 1.40
2278 3212 0.833287 AGTCCTGGTGCTCGCATTAT 59.167 50.000 0.00 0.00 0.00 1.28
2279 3213 0.613260 AAGTCCTGGTGCTCGCATTA 59.387 50.000 0.00 0.00 0.00 1.90
2280 3214 0.674895 GAAGTCCTGGTGCTCGCATT 60.675 55.000 0.00 0.00 0.00 3.56
2281 3215 1.078848 GAAGTCCTGGTGCTCGCAT 60.079 57.895 0.00 0.00 0.00 4.73
2282 3216 2.038814 TTGAAGTCCTGGTGCTCGCA 62.039 55.000 0.00 0.00 0.00 5.10
2283 3217 1.301716 TTGAAGTCCTGGTGCTCGC 60.302 57.895 0.00 0.00 0.00 5.03
2284 3218 0.951040 GGTTGAAGTCCTGGTGCTCG 60.951 60.000 0.00 0.00 0.00 5.03
2285 3219 0.606673 GGGTTGAAGTCCTGGTGCTC 60.607 60.000 0.00 0.00 0.00 4.26
2286 3220 1.062488 AGGGTTGAAGTCCTGGTGCT 61.062 55.000 0.00 0.00 31.11 4.40
2287 3221 0.890996 CAGGGTTGAAGTCCTGGTGC 60.891 60.000 6.61 0.00 44.99 5.01
2288 3222 3.329300 CAGGGTTGAAGTCCTGGTG 57.671 57.895 6.61 0.00 44.99 4.17
2292 3226 0.401395 TCCACCAGGGTTGAAGTCCT 60.401 55.000 0.00 0.00 38.11 3.85
2293 3227 0.250770 GTCCACCAGGGTTGAAGTCC 60.251 60.000 0.00 0.00 38.11 3.85
2294 3228 0.765510 AGTCCACCAGGGTTGAAGTC 59.234 55.000 0.00 0.00 38.11 3.01
2295 3229 0.474184 CAGTCCACCAGGGTTGAAGT 59.526 55.000 0.00 0.00 38.11 3.01
2296 3230 0.250901 CCAGTCCACCAGGGTTGAAG 60.251 60.000 0.00 0.00 38.11 3.02
2297 3231 1.715019 CCCAGTCCACCAGGGTTGAA 61.715 60.000 0.00 0.00 37.81 2.69
2298 3232 2.153401 CCCAGTCCACCAGGGTTGA 61.153 63.158 0.00 0.00 37.81 3.18
2299 3233 2.436109 CCCAGTCCACCAGGGTTG 59.564 66.667 0.00 0.00 37.81 3.77
2300 3234 2.730196 ATCCCCAGTCCACCAGGGTT 62.730 60.000 0.00 0.00 41.16 4.11
2301 3235 1.833055 TATCCCCAGTCCACCAGGGT 61.833 60.000 0.00 0.00 41.16 4.34
2302 3236 1.004230 TATCCCCAGTCCACCAGGG 59.996 63.158 0.00 0.00 42.44 4.45
2303 3237 1.345715 GGTATCCCCAGTCCACCAGG 61.346 65.000 0.00 0.00 0.00 4.45
2304 3238 0.620410 TGGTATCCCCAGTCCACCAG 60.620 60.000 0.00 0.00 38.72 4.00
2305 3239 0.912487 GTGGTATCCCCAGTCCACCA 60.912 60.000 0.00 0.00 46.45 4.17
2306 3240 0.620700 AGTGGTATCCCCAGTCCACC 60.621 60.000 9.17 0.00 43.93 4.61
2307 3241 0.541863 CAGTGGTATCCCCAGTCCAC 59.458 60.000 5.21 5.21 43.93 4.02
2308 3242 0.118346 ACAGTGGTATCCCCAGTCCA 59.882 55.000 0.00 0.00 43.93 4.02
2309 3243 0.831307 GACAGTGGTATCCCCAGTCC 59.169 60.000 0.00 0.00 43.93 3.85
2310 3244 0.831307 GGACAGTGGTATCCCCAGTC 59.169 60.000 0.00 0.00 43.93 3.51
2316 3250 2.699321 GGTTAGAGGGACAGTGGTATCC 59.301 54.545 0.00 0.00 0.00 2.59
2317 3251 3.371965 TGGTTAGAGGGACAGTGGTATC 58.628 50.000 0.00 0.00 0.00 2.24
2318 3252 3.484953 TGGTTAGAGGGACAGTGGTAT 57.515 47.619 0.00 0.00 0.00 2.73
2319 3253 3.371965 GATGGTTAGAGGGACAGTGGTA 58.628 50.000 0.00 0.00 0.00 3.25
2320 3254 2.188817 GATGGTTAGAGGGACAGTGGT 58.811 52.381 0.00 0.00 0.00 4.16
2321 3255 1.486726 GGATGGTTAGAGGGACAGTGG 59.513 57.143 0.00 0.00 0.00 4.00
2322 3256 2.187958 TGGATGGTTAGAGGGACAGTG 58.812 52.381 0.00 0.00 0.00 3.66
2323 3257 2.572104 GTTGGATGGTTAGAGGGACAGT 59.428 50.000 0.00 0.00 0.00 3.55
2324 3258 2.571653 TGTTGGATGGTTAGAGGGACAG 59.428 50.000 0.00 0.00 0.00 3.51
2325 3259 2.626785 TGTTGGATGGTTAGAGGGACA 58.373 47.619 0.00 0.00 0.00 4.02
2326 3260 3.244770 TGTTGTTGGATGGTTAGAGGGAC 60.245 47.826 0.00 0.00 0.00 4.46
2327 3261 2.983192 TGTTGTTGGATGGTTAGAGGGA 59.017 45.455 0.00 0.00 0.00 4.20
2328 3262 3.433306 TGTTGTTGGATGGTTAGAGGG 57.567 47.619 0.00 0.00 0.00 4.30
2329 3263 4.335416 ACATGTTGTTGGATGGTTAGAGG 58.665 43.478 0.00 0.00 0.00 3.69
2330 3264 5.964958 AACATGTTGTTGGATGGTTAGAG 57.035 39.130 11.07 0.00 39.45 2.43
2342 3276 1.066908 CAGGCGAACCAACATGTTGTT 59.933 47.619 31.20 24.89 42.08 2.83
2343 3277 0.667993 CAGGCGAACCAACATGTTGT 59.332 50.000 31.20 17.91 38.85 3.32
2344 3278 0.667993 ACAGGCGAACCAACATGTTG 59.332 50.000 28.18 28.18 39.06 3.33
2345 3279 2.264005 TACAGGCGAACCAACATGTT 57.736 45.000 4.92 4.92 39.06 2.71
2346 3280 2.264005 TTACAGGCGAACCAACATGT 57.736 45.000 0.00 0.00 39.06 3.21
2347 3281 3.848272 ATTTACAGGCGAACCAACATG 57.152 42.857 0.00 0.00 39.06 3.21
2348 3282 3.372822 CGTATTTACAGGCGAACCAACAT 59.627 43.478 0.00 0.00 39.06 2.71
2349 3283 2.737783 CGTATTTACAGGCGAACCAACA 59.262 45.455 0.00 0.00 39.06 3.33
2350 3284 2.995258 TCGTATTTACAGGCGAACCAAC 59.005 45.455 0.00 0.00 39.06 3.77
2351 3285 3.316071 TCGTATTTACAGGCGAACCAA 57.684 42.857 0.00 0.00 39.06 3.67
2352 3286 3.530265 ATCGTATTTACAGGCGAACCA 57.470 42.857 0.00 0.00 39.06 3.67
2353 3287 4.330620 TCAAATCGTATTTACAGGCGAACC 59.669 41.667 0.00 0.00 36.92 3.62
2354 3288 5.459110 TCAAATCGTATTTACAGGCGAAC 57.541 39.130 0.00 0.00 36.92 3.95
2355 3289 6.671614 AATCAAATCGTATTTACAGGCGAA 57.328 33.333 0.00 0.00 36.92 4.70
2356 3290 6.982141 AGTAATCAAATCGTATTTACAGGCGA 59.018 34.615 0.00 0.00 37.76 5.54
2357 3291 7.173863 AGTAATCAAATCGTATTTACAGGCG 57.826 36.000 0.00 0.00 0.00 5.52
2358 3292 8.609176 TGAAGTAATCAAATCGTATTTACAGGC 58.391 33.333 0.00 0.00 34.30 4.85
2483 3421 9.952030 TCCCAAAAAGTTTTGTCTTAGATTTTT 57.048 25.926 13.85 0.00 44.52 1.94
2484 3422 9.378551 GTCCCAAAAAGTTTTGTCTTAGATTTT 57.621 29.630 13.85 0.00 44.52 1.82
2485 3423 8.536175 TGTCCCAAAAAGTTTTGTCTTAGATTT 58.464 29.630 13.85 0.00 44.52 2.17
2486 3424 8.073467 TGTCCCAAAAAGTTTTGTCTTAGATT 57.927 30.769 13.85 0.00 44.52 2.40
2487 3425 7.559897 TCTGTCCCAAAAAGTTTTGTCTTAGAT 59.440 33.333 13.85 0.00 44.52 1.98
2488 3426 6.887545 TCTGTCCCAAAAAGTTTTGTCTTAGA 59.112 34.615 13.85 9.77 44.52 2.10
2489 3427 7.095695 TCTGTCCCAAAAAGTTTTGTCTTAG 57.904 36.000 13.85 8.10 44.52 2.18
2490 3428 6.096282 CCTCTGTCCCAAAAAGTTTTGTCTTA 59.904 38.462 13.85 0.25 44.52 2.10
2491 3429 5.105351 CCTCTGTCCCAAAAAGTTTTGTCTT 60.105 40.000 13.85 0.00 44.52 3.01
2492 3430 4.402474 CCTCTGTCCCAAAAAGTTTTGTCT 59.598 41.667 13.85 0.00 44.52 3.41
2493 3431 4.401202 TCCTCTGTCCCAAAAAGTTTTGTC 59.599 41.667 13.85 6.32 44.52 3.18
2494 3432 4.349365 TCCTCTGTCCCAAAAAGTTTTGT 58.651 39.130 13.85 0.00 44.52 2.83
2495 3433 5.105351 ACTTCCTCTGTCCCAAAAAGTTTTG 60.105 40.000 0.61 9.15 45.34 2.44
2496 3434 5.023452 ACTTCCTCTGTCCCAAAAAGTTTT 58.977 37.500 0.00 0.00 0.00 2.43
2497 3435 4.610333 ACTTCCTCTGTCCCAAAAAGTTT 58.390 39.130 0.00 0.00 0.00 2.66
2498 3436 4.251103 ACTTCCTCTGTCCCAAAAAGTT 57.749 40.909 0.00 0.00 0.00 2.66
2501 3439 5.319043 ACATACTTCCTCTGTCCCAAAAA 57.681 39.130 0.00 0.00 0.00 1.94
2505 3443 4.684724 AGTAACATACTTCCTCTGTCCCA 58.315 43.478 0.00 0.00 34.86 4.37
2508 3446 6.688578 TGTCAAGTAACATACTTCCTCTGTC 58.311 40.000 0.00 0.00 45.38 3.51
2578 3516 5.368230 AGATGTTTTGGTGGGTGGTATTTTT 59.632 36.000 0.00 0.00 0.00 1.94
2631 3569 5.301045 CCTGTCAATATGCAAGTCCATTGAT 59.699 40.000 11.61 0.00 41.83 2.57
2640 3578 5.181811 TCTCAACAACCTGTCAATATGCAAG 59.818 40.000 0.00 0.00 0.00 4.01
2643 3581 5.627499 TTCTCAACAACCTGTCAATATGC 57.373 39.130 0.00 0.00 0.00 3.14
2663 3601 8.215132 CGGAGAGCATATACGAAGTTATTTTTC 58.785 37.037 0.00 0.00 37.78 2.29
2664 3602 7.924412 TCGGAGAGCATATACGAAGTTATTTTT 59.076 33.333 0.00 0.00 37.78 1.94
2732 3671 5.044476 ACACATCTCTCTCCCTCTCTCTTTA 60.044 44.000 0.00 0.00 0.00 1.85
2733 3672 4.264352 ACACATCTCTCTCCCTCTCTCTTT 60.264 45.833 0.00 0.00 0.00 2.52
2742 3681 1.270907 ACCACACACATCTCTCTCCC 58.729 55.000 0.00 0.00 0.00 4.30
2744 3683 4.489810 CAACTACCACACACATCTCTCTC 58.510 47.826 0.00 0.00 0.00 3.20
2745 3684 3.259374 CCAACTACCACACACATCTCTCT 59.741 47.826 0.00 0.00 0.00 3.10
2746 3685 3.589988 CCAACTACCACACACATCTCTC 58.410 50.000 0.00 0.00 0.00 3.20
2747 3686 2.303022 CCCAACTACCACACACATCTCT 59.697 50.000 0.00 0.00 0.00 3.10
2748 3687 2.038557 ACCCAACTACCACACACATCTC 59.961 50.000 0.00 0.00 0.00 2.75
2749 3688 2.054799 ACCCAACTACCACACACATCT 58.945 47.619 0.00 0.00 0.00 2.90
2750 3689 2.561478 ACCCAACTACCACACACATC 57.439 50.000 0.00 0.00 0.00 3.06
2751 3690 3.306472 AAACCCAACTACCACACACAT 57.694 42.857 0.00 0.00 0.00 3.21
2757 3696 4.276678 GTCAAGGTTAAACCCAACTACCAC 59.723 45.833 0.00 0.00 39.75 4.16
2760 3699 6.644248 ATTGTCAAGGTTAAACCCAACTAC 57.356 37.500 0.00 0.00 39.75 2.73
2795 3734 9.110502 AGTAGAAGATTTTTCTCTTTTTGTCGT 57.889 29.630 0.00 0.00 35.63 4.34
2796 3735 9.587461 GAGTAGAAGATTTTTCTCTTTTTGTCG 57.413 33.333 0.00 0.00 35.63 4.35
2801 3740 8.664992 AGAGGGAGTAGAAGATTTTTCTCTTTT 58.335 33.333 0.00 0.00 35.63 2.27
2852 3791 9.733219 GAGCGTTTAGATTACTACTTTAGTGAT 57.267 33.333 0.00 0.00 39.81 3.06
2853 3792 8.954350 AGAGCGTTTAGATTACTACTTTAGTGA 58.046 33.333 0.00 0.00 39.81 3.41
2854 3793 9.570488 AAGAGCGTTTAGATTACTACTTTAGTG 57.430 33.333 0.00 0.00 39.81 2.74
2867 3806 9.017669 CGTAAACTAACATAAGAGCGTTTAGAT 57.982 33.333 0.00 0.00 30.36 1.98
2868 3807 7.485913 CCGTAAACTAACATAAGAGCGTTTAGA 59.514 37.037 0.00 0.00 30.36 2.10
2869 3808 7.485913 TCCGTAAACTAACATAAGAGCGTTTAG 59.514 37.037 0.00 0.00 30.36 1.85
2870 3809 7.312154 TCCGTAAACTAACATAAGAGCGTTTA 58.688 34.615 0.00 0.00 0.00 2.01
2871 3810 6.158598 TCCGTAAACTAACATAAGAGCGTTT 58.841 36.000 0.00 0.00 0.00 3.60
2872 3811 5.713025 TCCGTAAACTAACATAAGAGCGTT 58.287 37.500 0.00 0.00 0.00 4.84
2873 3812 5.314923 TCCGTAAACTAACATAAGAGCGT 57.685 39.130 0.00 0.00 0.00 5.07
2874 3813 4.738740 CCTCCGTAAACTAACATAAGAGCG 59.261 45.833 0.00 0.00 0.00 5.03
2875 3814 5.048507 CCCTCCGTAAACTAACATAAGAGC 58.951 45.833 0.00 0.00 0.00 4.09
2876 3815 6.096564 ACTCCCTCCGTAAACTAACATAAGAG 59.903 42.308 0.00 0.00 0.00 2.85
2877 3816 5.954150 ACTCCCTCCGTAAACTAACATAAGA 59.046 40.000 0.00 0.00 0.00 2.10
2878 3817 6.218108 ACTCCCTCCGTAAACTAACATAAG 57.782 41.667 0.00 0.00 0.00 1.73
2879 3818 7.902920 ATACTCCCTCCGTAAACTAACATAA 57.097 36.000 0.00 0.00 0.00 1.90
2880 3819 7.902920 AATACTCCCTCCGTAAACTAACATA 57.097 36.000 0.00 0.00 0.00 2.29
2881 3820 6.803366 AATACTCCCTCCGTAAACTAACAT 57.197 37.500 0.00 0.00 0.00 2.71
2882 3821 6.183360 CGTAATACTCCCTCCGTAAACTAACA 60.183 42.308 0.00 0.00 0.00 2.41
2883 3822 6.183360 ACGTAATACTCCCTCCGTAAACTAAC 60.183 42.308 0.00 0.00 0.00 2.34
2884 3823 5.885912 ACGTAATACTCCCTCCGTAAACTAA 59.114 40.000 0.00 0.00 0.00 2.24
2885 3824 5.437060 ACGTAATACTCCCTCCGTAAACTA 58.563 41.667 0.00 0.00 0.00 2.24
2886 3825 4.273318 ACGTAATACTCCCTCCGTAAACT 58.727 43.478 0.00 0.00 0.00 2.66
2887 3826 4.639135 ACGTAATACTCCCTCCGTAAAC 57.361 45.455 0.00 0.00 0.00 2.01
2888 3827 6.959639 ATTACGTAATACTCCCTCCGTAAA 57.040 37.500 19.05 0.00 41.99 2.01
2889 3828 6.735694 GCAATTACGTAATACTCCCTCCGTAA 60.736 42.308 20.62 0.00 42.59 3.18
2890 3829 5.278463 GCAATTACGTAATACTCCCTCCGTA 60.278 44.000 20.62 0.00 0.00 4.02
2891 3830 4.500375 GCAATTACGTAATACTCCCTCCGT 60.500 45.833 20.62 0.00 0.00 4.69
2892 3831 3.985925 GCAATTACGTAATACTCCCTCCG 59.014 47.826 20.62 3.54 0.00 4.63
2893 3832 4.202284 TGGCAATTACGTAATACTCCCTCC 60.202 45.833 20.62 13.35 0.00 4.30
2894 3833 4.952460 TGGCAATTACGTAATACTCCCTC 58.048 43.478 20.62 7.69 0.00 4.30
2895 3834 5.562298 ATGGCAATTACGTAATACTCCCT 57.438 39.130 20.62 11.76 0.00 4.20
2896 3835 7.094933 CCTTAATGGCAATTACGTAATACTCCC 60.095 40.741 20.62 16.92 0.00 4.30
2897 3836 7.094933 CCCTTAATGGCAATTACGTAATACTCC 60.095 40.741 20.62 19.49 0.00 3.85
2898 3837 7.443272 ACCCTTAATGGCAATTACGTAATACTC 59.557 37.037 20.62 12.85 0.00 2.59
2899 3838 7.284820 ACCCTTAATGGCAATTACGTAATACT 58.715 34.615 20.62 3.96 0.00 2.12
2900 3839 7.500720 ACCCTTAATGGCAATTACGTAATAC 57.499 36.000 20.62 15.24 0.00 1.89
2901 3840 9.624373 TTTACCCTTAATGGCAATTACGTAATA 57.376 29.630 20.62 6.11 0.00 0.98
2902 3841 8.522542 TTTACCCTTAATGGCAATTACGTAAT 57.477 30.769 15.07 15.07 0.00 1.89
2903 3842 7.934855 TTTACCCTTAATGGCAATTACGTAA 57.065 32.000 11.02 11.02 0.00 3.18
2904 3843 7.934855 TTTTACCCTTAATGGCAATTACGTA 57.065 32.000 0.00 0.00 0.00 3.57
2905 3844 6.837471 TTTTACCCTTAATGGCAATTACGT 57.163 33.333 0.00 0.00 0.00 3.57
2906 3845 7.317390 AGTTTTTACCCTTAATGGCAATTACG 58.683 34.615 0.00 0.00 0.00 3.18
2907 3846 8.528643 AGAGTTTTTACCCTTAATGGCAATTAC 58.471 33.333 0.00 0.00 0.00 1.89
2908 3847 8.658840 AGAGTTTTTACCCTTAATGGCAATTA 57.341 30.769 0.00 0.00 0.00 1.40
2909 3848 7.454694 AGAGAGTTTTTACCCTTAATGGCAATT 59.545 33.333 0.00 0.00 0.00 2.32
2910 3849 6.954102 AGAGAGTTTTTACCCTTAATGGCAAT 59.046 34.615 0.00 0.00 0.00 3.56
2911 3850 6.311735 AGAGAGTTTTTACCCTTAATGGCAA 58.688 36.000 0.00 0.00 0.00 4.52
2912 3851 5.887754 AGAGAGTTTTTACCCTTAATGGCA 58.112 37.500 0.00 0.00 0.00 4.92
2913 3852 5.357314 GGAGAGAGTTTTTACCCTTAATGGC 59.643 44.000 0.00 0.00 0.00 4.40
2914 3853 5.585047 CGGAGAGAGTTTTTACCCTTAATGG 59.415 44.000 0.00 0.00 0.00 3.16
2915 3854 6.171213 ACGGAGAGAGTTTTTACCCTTAATG 58.829 40.000 0.00 0.00 0.00 1.90
2916 3855 6.370186 ACGGAGAGAGTTTTTACCCTTAAT 57.630 37.500 0.00 0.00 0.00 1.40
2917 3856 5.279657 GGACGGAGAGAGTTTTTACCCTTAA 60.280 44.000 0.00 0.00 0.00 1.85
2918 3857 4.221482 GGACGGAGAGAGTTTTTACCCTTA 59.779 45.833 0.00 0.00 0.00 2.69
2919 3858 3.007723 GGACGGAGAGAGTTTTTACCCTT 59.992 47.826 0.00 0.00 0.00 3.95
2920 3859 2.566279 GGACGGAGAGAGTTTTTACCCT 59.434 50.000 0.00 0.00 0.00 4.34
2921 3860 2.354503 GGGACGGAGAGAGTTTTTACCC 60.355 54.545 0.00 0.00 0.00 3.69
2922 3861 2.301009 TGGGACGGAGAGAGTTTTTACC 59.699 50.000 0.00 0.00 0.00 2.85
2923 3862 3.243975 TGTGGGACGGAGAGAGTTTTTAC 60.244 47.826 0.00 0.00 0.00 2.01
2924 3863 2.967201 TGTGGGACGGAGAGAGTTTTTA 59.033 45.455 0.00 0.00 0.00 1.52
2925 3864 1.766496 TGTGGGACGGAGAGAGTTTTT 59.234 47.619 0.00 0.00 0.00 1.94
2926 3865 1.420430 TGTGGGACGGAGAGAGTTTT 58.580 50.000 0.00 0.00 0.00 2.43
2927 3866 1.420430 TTGTGGGACGGAGAGAGTTT 58.580 50.000 0.00 0.00 0.00 2.66
2928 3867 1.645710 ATTGTGGGACGGAGAGAGTT 58.354 50.000 0.00 0.00 0.00 3.01
2929 3868 2.526888 TATTGTGGGACGGAGAGAGT 57.473 50.000 0.00 0.00 0.00 3.24
2930 3869 4.021894 CCTTATATTGTGGGACGGAGAGAG 60.022 50.000 0.00 0.00 0.00 3.20
2931 3870 3.895656 CCTTATATTGTGGGACGGAGAGA 59.104 47.826 0.00 0.00 0.00 3.10
2932 3871 3.641906 ACCTTATATTGTGGGACGGAGAG 59.358 47.826 0.00 0.00 0.00 3.20
2933 3872 3.640029 GACCTTATATTGTGGGACGGAGA 59.360 47.826 0.00 0.00 0.00 3.71
2934 3873 3.552273 CGACCTTATATTGTGGGACGGAG 60.552 52.174 0.00 0.00 34.54 4.63
2935 3874 2.363038 CGACCTTATATTGTGGGACGGA 59.637 50.000 0.00 0.00 34.54 4.69
2936 3875 2.750948 CGACCTTATATTGTGGGACGG 58.249 52.381 0.00 0.00 34.54 4.79
2937 3876 2.132762 GCGACCTTATATTGTGGGACG 58.867 52.381 0.00 0.00 39.24 4.79
2938 3877 3.470645 AGCGACCTTATATTGTGGGAC 57.529 47.619 0.00 0.00 0.00 4.46
2939 3878 3.452990 TCAAGCGACCTTATATTGTGGGA 59.547 43.478 0.00 0.00 0.00 4.37
2940 3879 3.804036 TCAAGCGACCTTATATTGTGGG 58.196 45.455 0.00 0.00 0.00 4.61
2941 3880 5.811399 TTTCAAGCGACCTTATATTGTGG 57.189 39.130 0.00 0.00 0.00 4.17
2942 3881 7.305474 AGTTTTTCAAGCGACCTTATATTGTG 58.695 34.615 0.00 0.00 0.00 3.33
2943 3882 7.448748 AGTTTTTCAAGCGACCTTATATTGT 57.551 32.000 0.00 0.00 0.00 2.71
2947 3886 9.880157 ACTATAAGTTTTTCAAGCGACCTTATA 57.120 29.630 0.00 0.00 0.00 0.98
2948 3887 8.665685 CACTATAAGTTTTTCAAGCGACCTTAT 58.334 33.333 0.00 0.00 0.00 1.73
2949 3888 7.118680 CCACTATAAGTTTTTCAAGCGACCTTA 59.881 37.037 0.00 0.00 0.00 2.69
2950 3889 6.072673 CCACTATAAGTTTTTCAAGCGACCTT 60.073 38.462 0.00 0.00 0.00 3.50
2951 3890 5.411669 CCACTATAAGTTTTTCAAGCGACCT 59.588 40.000 0.00 0.00 0.00 3.85
2952 3891 5.410439 TCCACTATAAGTTTTTCAAGCGACC 59.590 40.000 0.00 0.00 0.00 4.79
2953 3892 6.304882 GTCCACTATAAGTTTTTCAAGCGAC 58.695 40.000 0.00 0.00 0.00 5.19
2954 3893 5.119588 CGTCCACTATAAGTTTTTCAAGCGA 59.880 40.000 0.00 0.00 0.00 4.93
2955 3894 5.313623 CGTCCACTATAAGTTTTTCAAGCG 58.686 41.667 0.00 0.00 0.00 4.68
2956 3895 5.410439 TCCGTCCACTATAAGTTTTTCAAGC 59.590 40.000 0.00 0.00 0.00 4.01
2957 3896 6.092259 CCTCCGTCCACTATAAGTTTTTCAAG 59.908 42.308 0.00 0.00 0.00 3.02
2958 3897 5.935789 CCTCCGTCCACTATAAGTTTTTCAA 59.064 40.000 0.00 0.00 0.00 2.69
2959 3898 5.484715 CCTCCGTCCACTATAAGTTTTTCA 58.515 41.667 0.00 0.00 0.00 2.69
2960 3899 4.874396 CCCTCCGTCCACTATAAGTTTTTC 59.126 45.833 0.00 0.00 0.00 2.29
2961 3900 4.533311 TCCCTCCGTCCACTATAAGTTTTT 59.467 41.667 0.00 0.00 0.00 1.94
2962 3901 4.098894 TCCCTCCGTCCACTATAAGTTTT 58.901 43.478 0.00 0.00 0.00 2.43
2963 3902 3.705072 CTCCCTCCGTCCACTATAAGTTT 59.295 47.826 0.00 0.00 0.00 2.66
2964 3903 3.297736 CTCCCTCCGTCCACTATAAGTT 58.702 50.000 0.00 0.00 0.00 2.66
2965 3904 2.244252 ACTCCCTCCGTCCACTATAAGT 59.756 50.000 0.00 0.00 0.00 2.24
2966 3905 2.946785 ACTCCCTCCGTCCACTATAAG 58.053 52.381 0.00 0.00 0.00 1.73
2967 3906 3.461085 ACTACTCCCTCCGTCCACTATAA 59.539 47.826 0.00 0.00 0.00 0.98
2968 3907 3.051581 ACTACTCCCTCCGTCCACTATA 58.948 50.000 0.00 0.00 0.00 1.31
2969 3908 1.851653 ACTACTCCCTCCGTCCACTAT 59.148 52.381 0.00 0.00 0.00 2.12
2970 3909 1.293062 ACTACTCCCTCCGTCCACTA 58.707 55.000 0.00 0.00 0.00 2.74
2971 3910 2.085479 ACTACTCCCTCCGTCCACT 58.915 57.895 0.00 0.00 0.00 4.00
2972 3911 4.759893 ACTACTCCCTCCGTCCAC 57.240 61.111 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.