>input_sequence_63680
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-------------------------------ATG-AGCTCTCGGATGGCCGGAGCCACGCTGCTGCGCCACCTGGGCCCC
CGCCTCTTCGCCGCCGCCGAGCCGGCGTCCGGGCTCGCCGCGAGCGCGAGGGGCATCATGCCCGCCGCCGCGAGGATCTT
CCCCGCGCGGATGGCCAGCACAGAGGCTGCCGGCCCGCGTGCCAAACAAGAAGAAGCCACTGAAAAGCCCCAGGGCGCAA
CAACGCCGG---AGCAGAACAAGAAGGCCGTGGTGAGCTACTGGGGCATCGAGCCGCGGAAGCTCGTCAAGGACGACGGC
ACGGAGTGGCCGTGGTTCTCCTTCAGGCCGTGGGACACGTACCGGCCGGACACGTCCATCGACGTGGCCAAGCACCACGA
GCCCAGGGCGGTGGCGGACAAGGTGGCGTACCTCATCGTGCGGACGCTGCGCAAGGGAAGCGACCTCTTCTTCCAGCGCC
GGCATGCGAGCCACGCCTTGCTGCTGGAGACGGTGGCCGCGGTGCCGCCCATGGTGGGCGGCGTGCTGCTGCACCTGCGC
TCGCTCCGCCGCTTCGAGCACAGCGGCGGCTGGATCCGCGCGCTCATGGAGGAGGCCGAGAACGAGCGCATGCACCTCAT
GACCTTCATGGAGGTGACGCAGCCGCTGTGGTGGGAGCGCGCGCTCGTGCTCGCCACTCAGGGCGTCTTCTTCAACGCCT
ACTTCGTCGGCTACCTCATCTCCCCAAAGTTCGCGCACCGCTTCGTCGGCTACCTCGAGGAGGAGGCCGTCCACTCCTAC
ACCGAGTACCTCAAGGACCTCGAGGCCGGCTTGATCGAGAACACGCCCGCGCCGGCCATCGCCATCGACTACTGGCGCCT
CCCCGCCGACGCCAGGCTCAAAGACGTCGTCATCGCCGTGCGCGCCGACGAGGCGCATCACCGCGACGCCAACCACTACG
CATCGGACATCCATTACCAGGGAATGACGCTGAATCAGACGCCTGCGCCGCTCGGGTACCACTGA---------------
--------------------------------------------------------------------------------
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--------
>chr2B_1_TraesCS2B01G459000
ATGGAATCTGTCGTCCCCATCATCCCGGCCACGGCGAAGAATGGTC-AAGTCGCCTCCCCGGCTGACCCCCAAAGGCGAA
GACCAGTAGTATTTCCCAACCCAGGTGGCACGAGCACGACCGTCCCGTGCGTGGCATCCACGCCACAAGCAGCACTCCAG
GTCAAGTTCGCAGGGCGTT-----CGTGTCCGGATCGCACAGCGCAACCGATGGATGG----------------------
------CTCGCGAACTCCCCCGGAAGCCGGAAGCTGGCGACGACGTTCCCCGTCACGAGCTCCTCGGCCAGTCCGTTAGG
AACTTTTGA---------CTAGT-----------------------CAACCAGACAGAGACTTGCACGGCAAGCAGTTGA
TCCCGTTTAGATT-------------------------------------------------------------------
--------------------TTTTTTAGCAAAGATTCCGTTTAGATTAGACAACGGCTGTGCCCAGGAAGA-TGCCGCTC
TGCCCAGGAAGCAGCGCGCGCCGCCCGAGCCCGCCGCACTACTGCATATAATTTGTGTGGTAGTAGTACTAGTAGGTACA
ACTGTCTCAGGTCAAATATGCTCACCTTTCTAAATTTCAGCAGTCTGTCTTTTTGCGGGGC--------AAATTAAGTAG
TACTCTGTTAGCAGCCCCTCATGCAAAAAATACTAGTACTGTACTATTGTACAT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ATATA
GCAACATAAAGTAAGGATGAAACCACAAAATAATACTAACCTATTTTGAACTGAACCACACAAGAATTGGTTCATCCATG
ACAGT----TAGCTGCTGGGCGAGTGCGCACATGTTTTTT-GTTT----CTTCTTCTCTATCCAGGGGAGTGCGCAC---
-----ATGCTGTC--TAGTGACA-TTCCGGGAAGCACCGTGCCGTGCCGGCCGAGGCGTTCCCGACACGCGAGACGCGAC
C-CCCCTATAAAACCATCTCCAGCAAG-ACCTT-CCTTGCCATCAGTCGGTTCACAAGATCAACACCAACAGAAATCACT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CCCAGCCACCAA-GACTTCCCATTCGATCCGATCACCACA-AAAA-------CCTCAAGCTTTTCTACCAGAT
--TTTTAGTCGT----TCAA----CACCACCATG-AGCTCTCGGATGGCCGGAGCCACGCTGCTGCGCCACCTGGGCCCC
CGCCTCTTCGCCGCCGCCGAGCCGGCGTCCGGGCTCGCCGCGAGCGCGAGGGGCATCATGCCCGCCGCCGCGAGGATCTT
CCCCGCGCGGATGGCCAGCACAGAGGCTGCCGGCCCGCGTGCCAAACAAGAAGAAGCCACTGAAAAGCCCCAGGGCGCAA
CAACGCCGG---AGCAGAACAAGAAGGCCGTGGTGAGCTACTGGGGCATCGAGCCGCGGAAGCTCGTCAAGGACGACGGC
ACGGAGTGGCCGTGGTTCTCCTTCAGGCCGTGGGACACGTACCGGCCGGACACGTCCATCGACGTGGCCAAGCACCACGA
GCCCAGGGCGGTGGCGGACAAGGTGGCGTACCTCATCGTGCGGACGCTGCGCAAGGGAAGCGACCTCTTCTTCCAGCGCC
GGCATGCGAGCCACGCCTTGCTGCTGGAGACGGTGGCCGCGGTGCCGCCCATGGTGGGCGGCGTGCTGCTGCACCTGCGC
TCGCTCCGCCGCTTCGAGCACAGCGGCGGCTGGATCCGCGCGCTCATGGAGGAGGCCGAGAACGAGCGCATGCACCTCAT
GACCTTCATGGAGGTGACGCAGCCGCTGTGGTGGGAGCGCGCGCTCGTGCTCGCCACTCAGGGCGTCTTCTTCAACGCCT
ACTTCGTCGGCTACCTCATCTCCCCAAAGTTCGCGCACCGCTTCGTCGGCTACCTCGAGGAGGAGGCCGTCCACTCCTAC
ACCGAGTACCTCAAGGACCTCGAGGCCGGCTTGATCGAGAACACGCCCGCGCCGGCCATCGCCATCGACTACTGGCGCCT
CCCCGCCGACGCCAGGCTCAAAGACGTCGTCATCGCCGTGCGCGCCGACGAGGCGCATCACCGCGACGCCAACCACTACG
CATCGGACATCCATTACCAGGGAATGACGCTGAATCAGACGCCTGCGCCGCTCGGGTACCACTGATCAGTTCAATG---G
---ACCATAGGTCGATGCCTGCTCAGTCC-------------ACCGCTGTCAC---TTACTACCACTGTCGCCTACGTTT
GTCCCGTTAAATTTGAGATGGATT------------------------------------TTTTGTGTCACTTTGTACCC
AAAGATATGTTTGCCTAAGCCGTTAATTCCTGTAAATATGATTTTTTTAACATCAGTACAGACGCAAGCGCTCATATATA
TACACGCATACACCGTAGGCGCCTCGTCATCGACGGAAACGTCTCCTCCCACTGAAAACGTATCACCGGAAATTCTGAAA
TAAATCCAGGAATAATGCGAGCACCAGGACTTCAACCCTGGTGGACTGGGGATACCACTGTCCCTCTAACCATCCAACAA
CATGTTGGTTCGCCTGTAAATACGATTTGATTACTTCAGA----AAAATATATTACCTTCATCCTAAAAAACTTGTTTTA
GATTTATCTAGATACATATGAATCTAATATTAAAATATTTCTAGATACATCCGTATTTAGAAAAATCTAAGACAAAACTT
TTTGGGACAGAGGAAGTATGTTACTTGACAATAATGATATTTTTAACATACGTGCAATATGCATACTTTCCTCGAAAAAA
TACCACCCACCAAAACATCTCATCGTTAAAACTCTTAAATCATAAAATATCAATGGACTTGCATATTGACAGGTTGTTGA
GAAAAA-TAACTTCGTATATGCTCTCCGATCTATTAGTATTTGTGATGACCATCTTTAGATGAATGATCTTAAAGAGAGA
GGGAGAGAGATGTGTGTGGTAGTTGGGTTTAACCTTGACAATAATCTATCTCTACGACAAAAAGAGAAAAATCTTCTACT
CCCTCTGTAAATTAATATAAGAGCATTTATATCACTAAAGTAGTAATCTAAACGCTCTTATGTTAGTTTACGGAGGGAGT
ATTACGTAATTGCCATTAAGGGTAAAAACTCTCTCCGTCCCACAATATAAGGTCGCTTGAAAAACTTATAGTGGACGGAG
GGAGTAGT
>chr2D_1
ATGGAATCTGTCGTCCCCATCATCCCGTCCGCGATGAAGAATGGTC-AAGTCGCCTCCCCGGTTGACCCCCAAAGGCCAA
GACTAGTATGAAG--------CAGGTGGCGCGAGCACGGCCGTCCCGTGCGTGGCATCCACGGCACCAGCAGCACGGCAA
GTCAAGCTCGGCTCGCAAGGTGGCTGTGTCCGGATCGCGCAGCGCAACCGATGGATGG----------------------
------CTCGCGAACTCCCCCGGAAGCC-------GGCGACGACGTTCCCCGTCACGAGCTCCTCGGCCACTCCGTTAGG
AATCCTTTA---------CTAGT-----------------------CAACCAGACAGAGACTTGCACGGCAAGCAGTTGA
TCCCGTTTAGAATA------------------------------------------------------------------
--------------------TTTTTTAGCAAAGATTCCGTTTAGATTAGACAACGGCTGTGCTGCGCTGCGCTGCCGCTC
TGCCCAGGAAGCAGCGCGCCGGCCGAG---CCGCCGCACTACTGCATATAATTTGTGTGGTAGG-----TAGTAGGTACA
ACTGTCTCAGGTCAAATATGTCCACCTTTCTAAATTTCAGTAGTCTGTCTTTTTGCGGGGC--------AAATTA---AG
TACTCTGTTAGCAGCCCCTCATGCACAAA----TACTAGTGTACTATTGTGCATATTTTTTTTTCAAAAAAACTTCCAAT
CTATTCATCTTCAATCATGGCAGTACAACGAACACCAGAAATAAAAATTACATCCAGATCCGTAGACCACCTAGCGAAGA
TTACAAGCACCGAAGCGAGCCGAAGGCGCGCCGCCGTCAACGCCCCTCCATCACCGGAGCCAGGCACAACTTGTTGTAAT
AGATGGTCGGAAAATTGTCGTGCTAAGGCCCCATAGGACCAGCCCCCCAGAACAGCAACCGCCGTCGATGAAAAATAACG
TAGATCGGAAGGATCCAAACCGAAAACACACGAACGTAGACGAACAACGACGAGATCCGAGCAAATCCACCAAAGATATA
ACAACATAGAGTAAGGATGAAACCATAAAATAATA---ACTTATTTTGAACTGAAGCACACAAGAATTGGATCATCGATC
GCAGT----TAGCTGTTGGGCGAGTGCGCACATGTCTTTT-TTTTTTTACTTCTTCTCTATCCAGGGGAGAGTGCGCACA
TGTTG------TGTTTAGTGGCATTTCTGGGAAGCACCGTGCCGTGCCGGCCGAGACGTTCCCGAC-------ACGCGAC
C-CCCCTATAAAACCATCTCCAGCAAG-ACGTC-TCTTGCCATCAGTCAGCTTACCAGATAAACACCAACAGAAATCACT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CCCAGCCACCAAAGACTTCCCATTCGATCCGATCACCACA-AAAAA------CCTCAAGCTTCTCGACCGGTT
--TATTAGTTGT----TCAACAGCCAACACCATG-AGCTCTCGGATGGCCGGAGCCACGTTGCTGCGCCACCTGGGCCCC
CACCTCTTCGCCGCCGCCGAGCCGGCGTCCGGGCTCGCCGCGAGCGCGAGGGGTATCCTGCCCGCCGCCGCGAGGATCTT
CCCCGCGCGGATGGCCAGCACCG---CCGCCGGCGCGCATGCCAAACAAGAAGGTGACGCTGAAAAGCCCGAGAGCGCCA
CAGCGCCGG---AGCAGAACAAGAAGCCCGTGGCGAGCTACTGGGGCATCGAGCCGCGGAAGCTCGTCAAGGACGACGGC
ACGGAGTGGCCGTGGTTCTCCTTCAGGCCGTGGGACACGTACCGGCCGGACACGTCCATCGACGTGGCCAAGCACCACGA
GCCCAGGGCGGTGGCGGACAAGGTGGCGTACCTCATCGTGCGGACGCTGCGCGCGGGCAGCGACCTCTTCTTCCAGCGCC
GCCACGCTAGCCACGCGCTGCTGCTTGAGACGGTGGCGGCGGTGCCGCCCATGGTGGGCGGCGTGCTGCTGCACCTGCGC
TCGCTCCGCCGATTCGAGCACAGCGGCGGCTGGATCCGCGCGCTCATGGAGGAGGCCGAGAACGAGCGCATGCACCTCAT
GACCTTCATGGAGGTGACGCAGCCCCTGTGGTGGGAGCGCGCGCTCGTGCTCGCCACGCAGGGCGTCTTCTTCAACGCCT
ACTTCGTCGGCTACCTCATCTCCCCCAAGTTCGCGCACCGCTTCGTCGGCTACCTCGAGGAGGAGGCCGTCCACTCCTAC
ACCGAGTACCTCAAGGACCTTGAGGCCGGCTTGATCGAGAACACGCCCGCGCCGGCCATTGCCATCGACTACTGGCGCCT
CCCCGCCGACGCCAGGCTCAAGGACGTCGTCATCGCCGTGCGCGCCGACGAGGCGCATCACCGCGACGCCAACCACTACG
CATCGGACATCCATTACCAGGGAATGACGCTGAATCAGACGCCTGCGCCGCTCGGCTACCACTGATCAGTTCAATG---G
ACCACCATAGATCGATGCCTGCCCAGTCCTTCCGCCCAGTCCACCGCTGTCAC---CTACTACCACTGCCGCCGACGTTT
GTCCCGTTAA-TTTG---AGATGGATTGTTGCGCGCGCAGTATGTTTATGTCCATGAGTTTTTTGTGTCACTTTGTACCC
AAAGATATGTTTTTGTAAGCCGGTAATTCTTGTACATATGAATTGATTACT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TTTCTTGAAA----AAAATATGTG--------------------------
----------------------------------------------------------------------------ATAT
TTGGGTACAAAGTGATACTATTACTTGACAATAAA-ATATTTTTAACGGACGTGCAATATGCATACTTTCCTAGGCAAAA
TACCACCCACCAAAACATCTCATCGTTAAAGCTCTTAAATCATAAAATCTCAATGGATTACCATATTGACGGGTTGTTGA
T-AAAA-GAAATCCATATATGCTCTCCGATCTATTACTATTTGCACTGACCATGTTTAGATGAATGATCTCCAAGAGAGA
TG--------TGTGTATGTTAGTTGGGTT--ACCTTGACAGTAATCTATCCCAGTGACAGAAAGAAAGAAATCT------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>chr2A_1
ATGGAATCTGTCGTCCCCATCATCCCGGCCGCGGCGAAGAATGGTCAAAGTCGCCTCACCGGCTGACCCCCAAAGGCGAA
GACCAGTGGTATTTCCCAA-CCAGGTGGCACGAGCACGGCCGTCCCGTGCGTGGCATCCACGCCACAAGCAGCACTGCAG
GTCAAGTTCGCACGGCGGT-----TGTGTCCGGATCGCGCAGCGCAACCGATGGATGG----------------------
------CTCTCGAACTCCCCCGGAAGCC-------GGCGACGACGTTCCCCGTCACGAGCTCCTCGGCCACTCCGTTAGG
AATCTTTTA---------CTCCCTCCGTTTCAAATTACTTGTCTGTCAATCAGACAGAGACTTGCACGGCAAGCAGTTGA
TCCCGTTTAGATTGTACTCCCTCCGTTCCATAATGTAAAACGTTTTTTGACACTACACTAATGTGAAAAAACGTCTTACA
TTATGGGACAGAGGGGGTACTTTTTGAGCAAAGATTCCATTTAGATTAGACAACCGCTGT-----GCTGCGCTGCCGCTC
CGCCCAGGAAGCAGCGCGCGCCGGCCGAGCCCGCCGCACTATCCATTA----TTGTGTGGTG------------GGTACA
ACTGTGTCAAATTAAATATGCACACCTATCTAAACTA-AGTAGTCTGTTTACATCAAAAATAAATAACTAAATTAAGTAG
TACTCTGTTAGCAGCCCCTCATGCACAAAAAT----AGTATAGT--------AT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GTGTA
ACGAGATATAAGAATATTT---------------------TTGTTTTGAACTGAACCACAAAAGAATTGGATCATCCATG
ACAGT----TAGCTGTTGGGCGAGTGCGCACATGTCTTTT-TTT-----CTCCTTCTCTATCCA-GGGAGAATGCGCACA
TGTTGATGTTGTC--TAGTGACA-TTCCGGGAAGCACCGTGCCGTGCCG---------TTCCCGAC-------ACGCCAG
TTCCCCTATAAAACCATCTCCAGCAAAAACGTT-TCTTGCCATCACTCAGTTTACCAGATCAACACCAACAGAAATCACT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CCCAGCAACCAA-GACTTCCCATTCGATCCGATCACAAGA-AAATATTATACCCTCAAGCTTTTCGACCGGCG
TATTTTAGTAGT----TCAACAGCCAACACCATG-AGCTCTCGGATGGCCGGAGCCACGCTGCTGCGCCACCTGGGCCCC
CGCCTCTTCGCCGCCGCCGAGCCGGCGTCCAGGCTCGCCGCGAGCGCGAGGGGCATCATGCCGGCCGCCGCGAGGGTCTT
CCCCGCGCGGATGGCCAGCACCGAGGCCGCCGGCCCGCGTGCCAAGCACGAAGAAGCCACTGAAAAGCCCCAGGGCGCAA
CAGCGCCGG---AGCAGAACAAGAAGGCCGTGCCGAGCTACTGGGGTATCGAGCCGCGGAAGCTCGTCAAGGACGACGGC
ACGGAGTGGCCGTGGTTCTCCTTCAGGCCGTGGGACACGTACAGGCCGGACACGTCCATCGACGTGGCCAAGCACCACGA
GCCCAGGGCGGTGGCGGACAAGGTGGCGTACCTCATCGTGCGGACGCTGCGCAAGGGCAGCGACCTCTTCTTCCAGCGCC
GGCACGCCAGCCACGCGCTGCTGCTGGAGACGGTGGCGGCCGTGCCGCCCATGGTGGGCGGCGTGCTGCTGCACCTGCGC
TCGCTCCGCCGCTTCGAGCACAGCGGCGGCTGGATCCGCGCGCTCATGGAGGAGGCCGAGAACGAGCGCATGCACCTCAT
GACCTTCATGGAGGTGACGCAGCCGCTGTGGTGGGAGCGCGCGCTCGTGCTCGCCACTCAGGGCGTCTTCTTCAACGCCT
ACTTCGTCGGCTACCTCGTCTCCCCCAAGTTCGCGCACCGCTTCGTTGGCTACCTCGAGGAGGAGGCCGTCCACTCCTAC
ACCGAATACCTCAAGGACCTCGAGGCTGGCTTGATCGAGAACACGCCCGCGCCGGCCATCGCCATAGATTACTGGCGCCT
CCCCGCCGACGCCAGGCTCAAGGACGTCGTCACCGCCGTGCGCGCCGACGAGGCGCATCACCGTGACGCCAACCACTACG
CATCGGACATCCATTACCAGGGAATGACGCTGAATCAGACGCCTGCGCCACTCGGCTACCACTGATCAGTTCAATGGACG
---ACCATAGATCGATGCCTGCTCAGTCC-------------ACCGCTGTCAT---CTACTACCACTGTCGCCGACGTTT
GTCCCGTTAG-TTTGAGAAGATGGATTGTTGCGCGCGCAGTATGTTTATGTCTATGAG--TTTTGTGTCACTTTGTACCC
AAAGATATGTTTTG-TAAGCTGGTAATTCTTGTAAATATGATTTGATTACT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TTTCTTGAAAAAAAAAAACATGTG--------------------------
----------------------------------------------------------------------------ACAT
TTGGGTACAAAGTGATACTATTACTTGTGAATAAC-ATATTTTTAACGGATATTCAATATGCATGCTTTCCTAGGCAAAA
TGCCACCCACCAAAACATCTCATCGTTAAAGCTCTTAAATCATAAAATCTAAATGGATTTACATATTGACAGCTTGTTGA
T-AAAACTAACGCCATATATGCTCTCTGATCTATTACTA-TTGCACTGACCATGTTTAGATGAATGATCTCCAAGAGAGA
TG--------TGTGTATGTTAGTTGGGCTTAACCTTGACAGTAATCTATCTCACTGACAGAAAGAGAGAAAAATCTTCTA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>chr2A_129
--------------------------------------------------------------------------------
-------------------------------------------------CGTGGCATCTACGCACAG----GCACGGCAA
GTCAAGCTCGCCGGGCGTT-----CGTGTCCGGATCGCACAGCGCAACCTGATGGCAACATACACTGCGCCGGTCAACCG
AGACGTCTCGCGAACTCCCCCGGAAGCC-------GGCGACGACGT-CCCCGTCACGAGCGTTCGTGTTGGTCCGTTTAC
AAAAACTTATCTAGCTAGCTAGA-----------------------CAACCAGACAGACACTTGCACGGCAAGGAATTAG
TTGGATTATTCGGCACCAGCGCGCCGCCGCGCC-----------------------------------------------
----------------------------------------------------ACGGCTGTGCTGCACTGTCCAAGAAGCA
AGAAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AAACGGAAAAAAATTGGAACGTCGCAG
TCGCGGCTGTAGCTGGTGGACGAGTGCGCACATGTCTTCT-TTTT----C------------CA-GGGAGAGTGTCCAC-
------TGTTGTC--TGGTGACA-TTCCCGGAAGCACCGTGCCGGCCGAGCCC--------------------------C
C-TCCCTATAAAACCATCTCCGGCGAG-ACGTCGTCAAGCCATCGGTCAG-TTACCAGATCAACACCAACAGTAAACAGA
AATCATTTCCTAGCCCGCCAACAAAAAC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------A-GACTTCCCATTCGATCCGCTCACAAG--------------------CTTTTCGATCGCTT
--TAGTTGTTCAACAATCAACAGCCAACACCATG-AGCTCCCGGATGGCCGGAGCCACGCTTCTGCGCCACCTGGGCCCC
CGCCTCTTCGCCGCCGCCGAGCCAGCCTCCGGGCTCGCCGCGAGCGCGAGGGGCATCATGCCCGCCGCCGCGAGGATCTT
CCCCGCGCGGATGGCCAGCACCGAGGCCGCCGCCCCGCATGCCAAACAAGAAGATGATGCCGCGAGCCCCCAGGCGGCCG
CGACTCCAGAGCAGCAGAACAAGAAGCCCGTGGTGAGCTACTGGGGCATCGAGCCTCGGAAGCTCGTCAAGGATGACGGC
ACGGAGTGGCCATGGTTCTGCTTCAGGCCGTGGGACACGTACCGGCCGGACACGTCCATCGAAGTGGCCAAGCACCACGA
GCCCAAGGCCCTGGCGGACAAGGTGGCCTACTTCGTGGTTCGGTCGCTGCGCGTGCCCCGGGACCTCTTCTTCCAGCGCC
GGCACGCCAGCCATGCTCTGCTACTGGAAACGGTGGCGGCGGTGCCTCCCATGGTGGGCGGCGTGCTGCTGCACCTGCGC
TCGCTCCGCCGCTTCGAGCACAGCGGCGGCTGGATCCGGGCGCTCATGGAGGAGGCCGAGAACGAGCGCATGCACCTCAT
GACCTTCATGGAGGTGACGCAGCCGCGGTGGTGGGAGCGCGCGCTCGTGCTCGCCGCGCAGGGCGTCTTCTTCAACGCCT
ACTTCGTCGGGTACCTCATTTCCCCCAAGTTCGCGCACCGCTTCGTCGGGTACCTCGAGGAGGAGGCCGTGGAGTCTTAT
ACTGAGTATCTCAAGGACCTTGAGGCCGGATTGATCGAGAACACGCCCGCGCCGGCCATCGCCATCGACTACTGGCGCCT
CCCCGCCGACGCCAGGCTCAAGGACGTCGTCACCGCCGTGCGCGCCGACGAGGCGCATCACCGCGACGCCAACCACTACG
CATCGGACGTCCATTACCAGGGAATGACGCTGAATCAATCGCCTGCGCCGCTCGGGTACCACTGATCAGCTCAATG---G
---ACCATAGATCGATGCCTGCTCAGTCC-------------A-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>chr2A_559
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
TACTCTGTTAGCAGCCCCTCATGCAAAAAATTAAGGAGTATAGT--------AT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GTGTA
ACAACATAAAGGAATATTT---------------------TTATTTTGAACTGAACCACAAAAGAATTGGATCATCCATG
ACAGT----TAGCTGTTGGGCGAGTGCGCACATGTTTTTTGTTT-----CTTCTTCTCTATCCA-GGGAGAGTGCGCACA
TGTTG------TC--TAGTGACATTTCCGGGAAGCACCGTGCCGTGCCGGCCGAGACACTCCCGAC-------GCGTGGC
C-CATCTATAAAACCATCTCCAGCAAG-ACGTT-TCCTGCCATCAATCAGTTTGCCAGATCAACACCAACAGAAATCACA
TCCCAG-------CCACCGGGACCTTTTTTTTACACAGTACAGACGCAAGCGCTCATATAAACGCGTATACACTCACCCT
TATAAACGCACACACGTACACTCTATCCCTATGAGTACCTCCGAGAGACTGAGCTGGCATATCATGTTGAGATTTTACGA
AGTCACCGTAGGCGCCTCGTAGTCGACGGGAACGTCTCCTCCCACTGAAAGCGTATTGCCAGAATTCCTGAAATAAATCC
AGAATAAATGCAAGCACCATGATTTAAACCTTGATGGGTTGTGGATACCACTGTCCACCGAACCATTTCAACCAGAGTTT
GGTTCGCCCCAGCCACCAA-GACTTGCCATTCGATCCGATCACCATA-AAATATTATACCCTCAAACTTTTCGATCGGTT
--TATTACTTGT----CCAATAGCCACCACCATG-AGCTCTCGGATGGCCGGAGCCACGCTGCTGCGCCACCTGGGTCCC
CGCCTCTTCACCGCCGCCGACCCGGCGTCCGGGCTCGCTGCGAGCGCGAGGGGCATCATGCCCGCCGCCGCGAGGATCTT
CCCCGCGCGGATGGCCAGCACCGAGGCCGCCGCCCCGCATGCCAAACAAGAAGAAGCCACCGAAAAGCCCCAGGGCGCAA
CAACGCCGG---AGCACAACAAGAAGGCCGTGGTGAGCTACTGGGGCATCGAGCCGCGGAAGCTCGTGAAGGACGACGGC
ACGGAGTGGACGTGGTTCTCCTTCAGGCCGTGGGACACCTACCGCCCGGACACGTCCATCGACATGGCCAAGCACCACGA
GCCCAGGGCGGTGGCGGACAAGGTGGCGTACCTCATCGTGCGGACGCTGCGCGCGGGCAGCGACCTCTTCTTCCAGCGCC
GGCACGCCAGCCACGCGCTGCTGCTGGAGATGGTGGCGGCGGTGCCGCCCATGGTGGGCGGCGTGCTGCTGCACCTGCGC
TCGCTCCGCCGCTTCGAGCACAGCAGCGGCTGGATCCGCGCGCTCATGGAGGAGGCCGAGAACGAGCGCATGCACCTCAT
GACCTTCATGGAGGTGACGCAGCCGCTGTGGTGGGAGCGCGCGCTCGTGCTCGCCACTCAGGGCGTCTTCTTCAACGCCT
ACTTCGTCGGCTACCTCGTCTCCCCCAAGTTCGCGCACCGCTTCGTTGGCTACCTCGAGGAGGAGGCCGTCCACTCCTAC
ACCAAATACCTCAAGGACCTCGAGGCCGGCTTGATCGAGAACACGCCCGCGCCGGCCATCGCCATAGATTACTGGCGCCT
CCCCGCCGACGCCAGGCTCAAGGACGTCGTCACCGCCGTGCGCGCCGACGAGGCGCATCACCGTGACGCCAACCACTACG
CATCGGACATCCATTACCAGGGAATGACGCTGAATCAGACGCCTGCGCCACTCGGCTACCACTGATCAGTTCAATGGACG
---ACCATAGATCGATGCCTGCTCAGTCC-------------ACCGCTGTCAT---CTACTACCACTGTCGCCGACGTTT
GTCCCGTTAG-TTTGAGAAGATGGATTGTTGCGCGCGCAGTATGTTTATGTCTATGAG--TTTTGTGTCACTTTGTACCC
AAAGATATGTTTTG-TAAGCTGGTAATTCTTGTAAATATGATTTGATTACT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TTTCTTGAAAAAAAA---CATGTG--------------------------
----------------------------------------------------------------------------ACAT
TTGGGTACAAAGTGATACTATTACTTGTGAATAAC-ATATTTTTAACGGATATTCAATATGCATGCTTTCCTAGGCAAAA
TGCCACCCACCAAAACATCTCATCGTTAAAGCTCTTAAATCATAAAATCTAAATGGATTTACATATTGACAGCTTGTTGA
T-AAAACTAACGCCATATATGCTCTCTGATCTATTACTATTTGCACTGACCATGTTTAGATGAATGATCTCCAAGAGAGA
TG--------TGTGTATGTTAGTTGGGTTTAACCTTGACAGTTATCTATCTCACTGACAGAAAGAGAGAAAAATCTTCTA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>chr2B_837
CCCTCC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CTATAAAACCATCTCCGGCAAG-ACGTCGGCAAGCCATCCATC---------GATCAACACCAACAGAAATCACT
TCCCAC-------CCCGCCAACAAAAAC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------A-GACTTCCCATTCGATCCGC-CACAAGA-AAATAC----TCCCAAGC--TTTCGGTCGC--
---TTTAGTTGT----TCAACAGCCAACACCATG-AGCTCTCGGATGGCCGGAGCCACGCTGCTGCGCCACCTGGGCCCC
CGCCTCTTTGCCGCCGCCGAGCCGGCCTCCGGGCTCGCCGCCAGCGCGAGGGGCATCATGCCCGCCGCCGCGAGGATCTT
CCCCGCGCGGATGGCCAGCACCGAGGCCGCCGCCCCGCATGCCAAACAAGAAGATGATGCCGGAACACCCCAGGCGGCCG
CGACTCCAGAGCAGCAGAGCAAGAAGGCCGTGGTGAGCTACTGGGGCATCGAGCCGCGGAAGCTCGTCAAGGAGGACGGC
ACGGAGTGGCCGTGGTTCTGCTTCAGGCCGTGGGACACGTACCGGCCGGACACGTCCATCGACGTCACCAAGCACCACGA
GCCCAAGGCCCTGGCGGACAAGGTGGCCTACTTCGTGGTTCGGTCGCTGCGTGTGCCGCGGGACCTCTTCTTCCAGCGCC
GGCACGCCAGCCACGCGCTGCTGCTGGAGACTGTGGCGGCGGTGCCGCCCATGGTGGGCGGCGTGCTGCTCCACCTGCGC
TCGCTCCGCCGATTCGAGCACAGCGGCGGCTGGATCCGGGCGCTCATGGAGGAGGCCGAGAACGAGCGCATGCACCTCAT
GACCTTCATGGAGGTGACGCAGCCGCGCTGGTGGGAGCGCGCGCTCGTGCTCGCCGCGCAGGGCGTCTTCTTCAACGCCT
ACTTCGTCGGCTACCTCATCTCCCCCAAGTTCGCGCACCGCTTCGTCGGCTACCTCGAGGAGGAGGCCGTGGAGTCTTAC
ACTGAGTACCTCAAGGACCTCGAAGCCGGCTTGATCGAGAACACGCCCGCGCCGGCCATCGCCATCGACTACTGGCGCCT
CCCCGCCGACGCCAGGCTCAAAGACGTCGTCACCGCCGTGCGCGCCGACGAGGCGCATCACCGCGACGCCAACCACTACG
CATCGGACATCCATTACCAGGGAATGACGCTGAATCAGACGCCTGCGCCGCTCGGGTACCACTGATCAGCTCAATG---G
---ACCATAGATCGATGCCTGCTCAGCCC-------------ATCGTTGGTGCGTACTACTACCACTGTCGCCGATGTTT
GTCCTGTTAA-TTGGGATTGATT---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>chr4A_839
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--CCCCTATAAAACCATCTCCAGCAGG-ACGTT-TCCTGTCATCAGTCAGTTTACCAGATCAACACCAACAGAAATCACT
TCCCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------GCCACCAA-GACCTCCCATTCGATCCGGTCCCAACATAAATAC----CCCCAAAGCTTTTCGACCAGTT
--TATTAGTTGT----TCAAAAGCCACCATCATG-AGCTCACGGATGGCCGGAGCCAGCTA-CTGCGCCACCTGGGCCCC
CGCCTCTTCGCCGCCACCGAGCCGGCGTCCAGACTCGCCGCGAGCGCGAGGGGCATCATGCCCACCACCGCGAGGATCTT
CCCCGCGCGGATGGCCAGCACT---GCCGCAGGCCCGCATGCCAAACAAGAAGAAGCCACTGGAAAGCCCCAGGGCGCAA
CAACGCCGG---AGCAGAACAAGAAGGCCGTGCCGAGCTACTGGGGCATCAAGCCGCGGAAGCTCGTCGAGGACGACGGC
ACGGAGTGGTCGTGGTTCTCCTTCAGGCCGTGGGACACGTACCGGCCGGACACGTCCATGGACGTGGCCAAGCACCACGA
GCCGAGGGCGATGGCGGACAAGGTGGCGTAACTCATCGTGCGGACGCTGTGCGCGGGTAGCGACCTCTTCTTCCAGCGCC
GGCACGCCAGCCACATGCTGCTGCTGGAGACGGTCGCGGCGGTGCCACCCATGGTGGGCGGCGTGCTGCTGCACCTGCGC
TCGCTCCGCCGCTTCGAGCACAACGGCGGCTGGATCCGCGCGCTCATGGAGGAGGCCCAGAACGAGCGCATGCATCTCAT
GACCTTCATGGAGGTGACGCAGCCCTTGTGGTGCGAGCGCGCGCTCGTGCTCCCCACCCAGGGTGTCTTTTTCAACGCCT
ACTTCATCGGGTACCTCGTCTCCCCCAAGTTCGCGCACCGCTTCGTCGGCTACCTCGAGGAGGAGGCCGTACACT-----
---------------GACCTCGAGGCCGGCTTGATCGAGAACACGCCTGCCCCGGCCATCGCCATCGACTACTGGCGCCT
CCCCGCCGCCGCCAGGCTCAAGGACGACGTCATTGCCATGCGCGCCGATGAGGCGCATCATCGCGACGCCAACCACTACG
CATCAGACATCCATTACCAGGGAATGACGCTGAATCAGACGCCTGCGCCGCTCAGCTACCACTGATCAGTTCAACG---G
---AACACAGATCGATGACTGCTCAGTCC-------------ACCGCTGTCAC---CTACTACCACTGTCGCCATTGTTT
GTCCCGTTAA-TTTGAGATGGATT--------------------------------------------------------
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>chr2D_981
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---TTTAGTTGT----TCAACAATCAACAGCCAACAGCTCCCGGATGGCCGGAGCCACGCTTCTGCGCCACCTGGGCCCC
CGCCTCTTCGCCGCCGCCGAGCCAGCCTCCGGGCTCGCCGCGAGCGCGAGGGGCATCATGCCCGCCGCCGCGAGGATCTT
CCCCGCGCGGATGGCCAGCACCGAGGCCGCCGCCCCGCATGCCAAACAAGAAGATGATGCCGCGAGCCCCCAGGCGGCCG
CGACTCCAGAGCAGCAGAACAAGAAGCCCGTGGTGAGCTATTGGGGCATCGAGCCTCGGAAGCTCGTCAAGGATGACGGC
ACGGAGTGGCCGTGGTTCTGCTTCAGGCCGTGGGACACGTACCGGCCGGACACGTCCATCGACGTGACCAAGCACCACTT
GCCCAAGGCCCTGGCGGACAAGGTGGCGTACTTCGTTGTCCGATCGCTGCGCGTGCCCCGGGACCTCTTCTTCCAGCGCC
GGCACGCCAGCCACGCGCTGCTGCTGGAGACGGTGGCGGCGGTGCCGCCCATGGTGGGCGGCGTGCTACTTCACCTGCGC
TCGCTCCGCCGCTTCGAGCACAGCGGCGGCTGGATCCGGGCGCTCATGGAGGAGGCCGAGAACGAACGCATGCACCTCAT
GACCTTCATGGAGGTGACGCAGCCCCGGTGGTGGGAACGCGCGCTCGTGCTCGCCGCGCAGGGCGTCTTCTTCAACGCCT
ACTTCGTCGGCTACCTCATCTCCCCCAAGTTCGCGCACCGCTTCGTCGGGTACCTCGAGGAGGAGGCCGTGGAGTCCTAT
ACTGAGTACCTCAAGGACCTCGAGGCCGGCTTGATCGAGAACACGCCCGCCCCGGCCATCGCCATCGACTACTGGCGCCT
CCCCGCCGACGCCAGGCTCAAGGACGTCGTCACCGCCGTGCGCGCCGACGAGGCGCATCACCGCGACGCCAACCACTACG
CATCGGACATCCATTACCAGGGAATGACGCTGAATCAGACGCCTGCGCCGCTCGGGTACCACTGATCAGCTCAATG---G
---ACCATAGATCGATGCCTGCTCAGTCC-------------ATCGTTGGTGCGTACTACTACCACTGTCGCC-------
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>chr2D_1162
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---------------------------------CCCACATGCCAACCAAGAAAGTGGCGCTGAAAAGCCCGAGAGCGCCT
CGACGCCGG---AGCAGAGCAAGAGGGCCGTGGTGAGCTACTGGGGCATCGAACCGCGGAAGCTCGTCAAGGACGACGGC
ACGGAGTGGCCGTGGTTCTGCTTCAGGCCGTGGGACACGTACAGGCCGGACACGTCCATCGACGTCACCAAGCACCACGA
GCCCAAGGCCCTGGCGGACAAGGTGGCCTACTTCGTGGTTCGGTCGCTGCGTGTGCCCAGGGACCTCTTCTTCCAGCGCC
GGCACGCCAGCCACGCCCTGCTGCTGGAGACGGTCGCGGCGGTGCCGCCCATGGTGGGCGGCGTGCTGCTGCACCTGCGC
TCGCTCCGCCGCTTCGAGCACAGCGGCGGCTGGATCCGCGCGCTCATGGAGGAGGCCGAGAACGAGCGCATGCACCTCAT
GACCTTCATGGAGGTGACCCAGCCCCTGTGGTACGAGCGCGCCCTCGTCATCGCCGTCCAGGGCGTCTTCTTCAACGCCT
ACTTCTTCGGCTACCTCATTTCCCCCAAGTTCGCGCACCGCGTCGTCGGCTACCTCGAGGAGGAGGCCGTCCACTCCTAC
ACCGAGTTCCTCAAGGACCTCGACGACGGCAAGATCGACAACGTCCCCGCCTCGGCCATCGCCATCGACTACTGGCGCCT
CCCTGCCAACGCCACCCTCAAGGCCGTGGTCACCGTGGTGCGCGCCGACGAGGCTCACCACCGCGACGTCAACCACTTCG
CATCGG--------------------------------------------------------------------------
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--------
>SNPs
------------------------------S-------------------------------------------------
-------------------S------------------S-------------------------------------S---
--------------------------------------------------------------------------------
----------------------------SSSSSSS---------------------------------------------
--SS---S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------SSS-SSSSS---------
---------------------------------------------------------------SSSSSS-----------
---------------------S------------------S---------------------------------------
-------------------------------SS-----S-----------S-----------------------------
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S------------------------S---------SSS--S-----------------------------S---------
---------------S-------------------------S----------------------------S-S--S----
--------S----------------------------------------------S----------SSSSSSS-------
------------------------------S---S-------------S---S--S------------------------
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------------------------------------------------------------------------S-----S-
---------S----------------------------------------------------------------------
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---------------------S-----S----------------------------------------------------
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---------------------------------------------------------S----------------------
----S--S---------S-------------------S------------------------------------------
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-------------------------S------------------------------------------------------
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----------S---------------------------------------------S----------------S------
----------S---------------------------------------------------------------------
------------SSS-------S------S--------------SS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S---S-S------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-
--S--S---S--SS-SSS-S--------------SS-----------SS-----------------------S-SS----
------------------------------S-----------------S--------S--S-------------------
SS----------S-S---------------------S------SSS-------S----------------SS--------
S-SSSSSSSS-----S--S---------------------S-----------SSS----S-------S------SS-SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS
>forward_1409
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-----------------------------ACCTTCCTTGCCATCAGTCG-------------------------------
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>reverse_3155
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----------------------------------GGAAACGTCTCCTCCCACTG--------------------------
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--------
