Multiple sequence alignment - TraesCS2B01G444300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G444300 chr2B 100.000 2474 0 0 1 2474 637108508 637106035 0.000000e+00 4569.0
1 TraesCS2B01G444300 chr2B 84.175 594 61 15 901 1494 637101171 637100611 1.670000e-151 545.0
2 TraesCS2B01G444300 chr2B 87.330 442 41 10 2039 2472 18821019 18821453 2.210000e-135 492.0
3 TraesCS2B01G444300 chr2B 92.806 139 7 3 1719 1855 706184153 706184016 5.400000e-47 198.0
4 TraesCS2B01G444300 chr2B 92.086 139 10 1 1717 1855 210262831 210262694 6.980000e-46 195.0
5 TraesCS2B01G444300 chr2B 83.908 87 12 2 1818 1902 47457349 47457263 5.670000e-12 82.4
6 TraesCS2B01G444300 chr2B 88.889 63 7 0 1836 1898 677045501 677045563 7.340000e-11 78.7
7 TraesCS2B01G444300 chr2D 94.632 652 27 6 858 1503 535671172 535670523 0.000000e+00 1003.0
8 TraesCS2B01G444300 chr2D 90.846 721 42 10 1 702 535734038 535733323 0.000000e+00 944.0
9 TraesCS2B01G444300 chr2D 89.546 507 50 3 700 1205 535630487 535629983 7.460000e-180 640.0
10 TraesCS2B01G444300 chr2D 82.576 660 67 22 832 1486 535731866 535731250 2.800000e-149 538.0
11 TraesCS2B01G444300 chr2D 88.889 441 38 6 2041 2474 147116585 147117021 1.300000e-147 532.0
12 TraesCS2B01G444300 chr2D 84.211 247 39 0 1235 1481 535745617 535745371 8.840000e-60 241.0
13 TraesCS2B01G444300 chr2D 88.571 105 11 1 1532 1635 198464238 198464342 2.580000e-25 126.0
14 TraesCS2B01G444300 chr2D 85.345 116 13 2 1627 1742 384257109 384256998 1.550000e-22 117.0
15 TraesCS2B01G444300 chr7D 92.906 437 23 2 2046 2474 2920552 2920116 1.610000e-176 628.0
16 TraesCS2B01G444300 chr7D 79.167 360 61 10 19 367 55925930 55926286 1.140000e-58 237.0
17 TraesCS2B01G444300 chr7D 87.500 96 12 0 1532 1627 427585712 427585807 7.230000e-21 111.0
18 TraesCS2B01G444300 chr7D 78.857 175 23 7 175 335 72390145 72389971 3.360000e-19 106.0
19 TraesCS2B01G444300 chr7D 77.236 123 20 5 1 121 122880102 122880218 5.710000e-07 65.8
20 TraesCS2B01G444300 chr4D 90.271 442 35 6 2037 2474 11903559 11903122 2.760000e-159 571.0
21 TraesCS2B01G444300 chr4D 87.755 98 12 0 1532 1629 121406832 121406929 5.590000e-22 115.0
22 TraesCS2B01G444300 chr4D 87.129 101 9 1 1626 1726 3590616 3590520 7.230000e-21 111.0
23 TraesCS2B01G444300 chr4D 97.561 41 1 0 655 695 485409444 485409404 1.230000e-08 71.3
24 TraesCS2B01G444300 chr4D 93.182 44 2 1 653 695 3748060 3748017 2.050000e-06 63.9
25 TraesCS2B01G444300 chr4D 95.000 40 1 1 662 701 233458455 233458493 7.390000e-06 62.1
26 TraesCS2B01G444300 chr4D 94.737 38 1 1 658 695 24455890 24455854 9.560000e-05 58.4
27 TraesCS2B01G444300 chr1B 89.862 434 40 2 2042 2472 69260694 69261126 2.780000e-154 555.0
28 TraesCS2B01G444300 chr1B 95.620 137 6 0 1718 1854 372226380 372226516 1.150000e-53 220.0
29 TraesCS2B01G444300 chr1B 94.074 135 8 0 1718 1852 649332859 649332725 3.230000e-49 206.0
30 TraesCS2B01G444300 chr1B 78.704 324 53 4 1 323 687419764 687419456 4.170000e-48 202.0
31 TraesCS2B01G444300 chr1B 91.781 146 8 4 1705 1847 518809530 518809674 1.500000e-47 200.0
32 TraesCS2B01G444300 chr1B 78.495 186 26 12 155 329 355671661 355671843 2.600000e-20 110.0
33 TraesCS2B01G444300 chr1B 86.813 91 11 1 80 170 355671546 355671635 1.570000e-17 100.0
34 TraesCS2B01G444300 chr1B 100.000 36 0 0 660 695 394506690 394506655 1.590000e-07 67.6
35 TraesCS2B01G444300 chr1B 100.000 35 0 0 661 695 678279926 678279892 5.710000e-07 65.8
36 TraesCS2B01G444300 chr1B 97.143 35 1 0 661 695 607690259 607690225 2.660000e-05 60.2
37 TraesCS2B01G444300 chr6D 89.882 425 32 4 2037 2451 421465895 421465472 1.010000e-148 536.0
38 TraesCS2B01G444300 chr5D 89.095 431 38 5 2051 2472 369285731 369286161 6.060000e-146 527.0
39 TraesCS2B01G444300 chr5D 89.524 105 7 1 1626 1730 72240836 72240736 2.000000e-26 130.0
40 TraesCS2B01G444300 chr5D 97.222 36 0 1 660 695 381397406 381397372 2.660000e-05 60.2
41 TraesCS2B01G444300 chr7B 88.073 436 49 2 2041 2474 130079056 130078622 4.720000e-142 514.0
42 TraesCS2B01G444300 chr7B 86.937 444 46 11 2037 2471 653489266 653488826 2.860000e-134 488.0
43 TraesCS2B01G444300 chr7B 83.893 149 22 2 117 265 732301729 732301875 9.220000e-30 141.0
44 TraesCS2B01G444300 chr7B 95.122 41 2 0 661 701 563475962 563476002 5.710000e-07 65.8
45 TraesCS2B01G444300 chr7B 95.122 41 2 0 661 701 563658980 563659020 5.710000e-07 65.8
46 TraesCS2B01G444300 chr2A 84.121 529 33 19 1002 1494 678821986 678821473 4.820000e-127 464.0
47 TraesCS2B01G444300 chr2A 88.571 70 7 1 1845 1913 469791975 469792044 1.580000e-12 84.2
48 TraesCS2B01G444300 chr7A 81.924 343 46 8 6 335 544601275 544600936 2.420000e-70 276.0
49 TraesCS2B01G444300 chr7A 75.390 577 85 33 15 563 711581836 711582383 2.480000e-55 226.0
50 TraesCS2B01G444300 chr7A 94.737 133 7 0 1718 1850 83728731 83728599 8.970000e-50 207.0
51 TraesCS2B01G444300 chr7A 87.736 106 9 1 1616 1721 510625396 510625497 1.200000e-23 121.0
52 TraesCS2B01G444300 chr7A 87.500 96 12 0 1532 1627 655150134 655150039 7.230000e-21 111.0
53 TraesCS2B01G444300 chr7A 92.727 55 4 0 1845 1899 610449089 610449143 2.040000e-11 80.5
54 TraesCS2B01G444300 chr7A 95.122 41 2 0 661 701 606635694 606635734 5.710000e-07 65.8
55 TraesCS2B01G444300 chr7A 95.000 40 2 0 656 695 729258721 729258760 2.050000e-06 63.9
56 TraesCS2B01G444300 chr7A 100.000 29 0 0 93 121 735517915 735517943 1.000000e-03 54.7
57 TraesCS2B01G444300 chr5B 82.847 274 37 3 1626 1899 551403722 551403985 1.140000e-58 237.0
58 TraesCS2B01G444300 chr5B 92.647 136 10 0 1721 1856 699614294 699614429 1.940000e-46 196.0
59 TraesCS2B01G444300 chr6B 78.754 353 55 16 1 337 712113267 712113615 4.140000e-53 219.0
60 TraesCS2B01G444300 chr6B 91.111 45 4 0 661 705 524466788 524466832 7.390000e-06 62.1
61 TraesCS2B01G444300 chr5A 95.455 132 6 0 1720 1851 708307654 708307785 6.930000e-51 211.0
62 TraesCS2B01G444300 chr5A 89.809 157 11 5 1702 1857 655994084 655993932 1.940000e-46 196.0
63 TraesCS2B01G444300 chr5A 87.500 96 12 0 1532 1627 374884207 374884302 7.230000e-21 111.0
64 TraesCS2B01G444300 chr5A 87.500 96 12 0 1532 1627 525936367 525936272 7.230000e-21 111.0
65 TraesCS2B01G444300 chr5A 87.879 66 7 1 1845 1909 623562465 623562530 2.640000e-10 76.8
66 TraesCS2B01G444300 chr5A 89.286 56 4 2 657 711 406535071 406535017 4.410000e-08 69.4
67 TraesCS2B01G444300 chr3A 95.455 132 6 0 1720 1851 405827985 405828116 6.930000e-51 211.0
68 TraesCS2B01G444300 chr3A 94.574 129 7 0 1719 1847 644820391 644820519 1.500000e-47 200.0
69 TraesCS2B01G444300 chr3A 85.897 78 11 0 1821 1898 10301670 10301593 1.580000e-12 84.2
70 TraesCS2B01G444300 chr3A 100.000 28 0 0 1489 1516 38616060 38616033 4.000000e-03 52.8
71 TraesCS2B01G444300 chr4B 94.776 134 7 0 1721 1854 360232872 360233005 2.490000e-50 209.0
72 TraesCS2B01G444300 chr4B 82.946 129 19 3 283 410 4945863 4945989 2.010000e-21 113.0
73 TraesCS2B01G444300 chr4B 100.000 35 0 0 661 695 437940376 437940410 5.710000e-07 65.8
74 TraesCS2B01G444300 chr4B 100.000 34 0 0 662 695 435130412 435130445 2.050000e-06 63.9
75 TraesCS2B01G444300 chr4A 93.382 136 7 1 1721 1856 16485597 16485464 1.500000e-47 200.0
76 TraesCS2B01G444300 chr4A 87.500 96 12 0 1532 1627 138048736 138048831 7.230000e-21 111.0
77 TraesCS2B01G444300 chr4A 87.500 96 12 0 1532 1627 570517092 570516997 7.230000e-21 111.0
78 TraesCS2B01G444300 chr4A 92.593 54 4 0 1845 1898 27645835 27645888 7.340000e-11 78.7
79 TraesCS2B01G444300 chr4A 80.220 91 14 3 31 121 492164168 492164254 5.710000e-07 65.8
80 TraesCS2B01G444300 chr4A 79.545 88 14 3 34 121 682152281 682152198 2.660000e-05 60.2
81 TraesCS2B01G444300 chr6A 92.701 137 8 2 1719 1855 473421989 473422123 1.940000e-46 196.0
82 TraesCS2B01G444300 chr6A 97.222 36 1 0 660 695 332188227 332188262 7.390000e-06 62.1
83 TraesCS2B01G444300 chr6A 94.872 39 0 2 655 693 536979630 536979666 2.660000e-05 60.2
84 TraesCS2B01G444300 chr1D 92.143 140 10 1 1718 1856 96916666 96916527 1.940000e-46 196.0
85 TraesCS2B01G444300 chr1D 87.129 101 9 1 1626 1726 463382047 463381951 7.230000e-21 111.0
86 TraesCS2B01G444300 chr1D 97.059 34 1 0 662 695 19312211 19312178 9.560000e-05 58.4
87 TraesCS2B01G444300 chr1D 97.059 34 1 0 662 695 403375885 403375918 9.560000e-05 58.4
88 TraesCS2B01G444300 chr1D 97.059 34 1 0 662 695 488844823 488844790 9.560000e-05 58.4
89 TraesCS2B01G444300 chr1A 88.889 117 12 1 361 476 209425920 209425804 2.560000e-30 143.0
90 TraesCS2B01G444300 chr1A 87.705 122 13 2 358 477 561131153 561131032 9.220000e-30 141.0
91 TraesCS2B01G444300 chr1A 84.426 122 13 1 1626 1747 279731497 279731612 5.590000e-22 115.0
92 TraesCS2B01G444300 chr1A 97.368 38 1 0 658 695 343416974 343417011 5.710000e-07 65.8
93 TraesCS2B01G444300 chr1A 87.273 55 7 0 1574 1628 398059128 398059182 2.050000e-06 63.9
94 TraesCS2B01G444300 chr1A 97.143 35 1 0 661 695 504710448 504710414 2.660000e-05 60.2
95 TraesCS2B01G444300 chr1A 97.143 35 1 0 661 695 560878540 560878574 2.660000e-05 60.2
96 TraesCS2B01G444300 chr3D 82.840 169 18 6 178 335 583014990 583014822 9.220000e-30 141.0
97 TraesCS2B01G444300 chr3D 87.129 101 9 1 1626 1726 537154721 537154817 7.230000e-21 111.0
98 TraesCS2B01G444300 chr3D 87.000 100 12 1 1532 1630 590284895 590284994 7.230000e-21 111.0
99 TraesCS2B01G444300 chrUn 83.221 149 23 2 117 265 88480423 88480277 4.290000e-28 135.0
100 TraesCS2B01G444300 chrUn 83.221 149 23 2 117 265 88496296 88496150 4.290000e-28 135.0
101 TraesCS2B01G444300 chrUn 83.221 149 23 2 117 265 430036357 430036503 4.290000e-28 135.0
102 TraesCS2B01G444300 chrUn 83.221 149 23 2 117 265 445510518 445510372 4.290000e-28 135.0
103 TraesCS2B01G444300 chrUn 94.737 38 1 1 659 695 224653303 224653340 9.560000e-05 58.4
104 TraesCS2B01G444300 chrUn 100.000 29 0 0 667 695 412354034 412354006 1.000000e-03 54.7
105 TraesCS2B01G444300 chrUn 96.875 32 1 0 664 695 463493539 463493570 1.000000e-03 54.7
106 TraesCS2B01G444300 chrUn 94.286 35 1 1 662 695 41907509 41907475 4.000000e-03 52.8
107 TraesCS2B01G444300 chrUn 100.000 28 0 0 664 691 270380422 270380449 4.000000e-03 52.8
108 TraesCS2B01G444300 chr3B 88.660 97 7 1 1626 1722 239907042 239906950 5.590000e-22 115.0
109 TraesCS2B01G444300 chr3B 92.857 56 4 0 1845 1900 736927264 736927319 5.670000e-12 82.4
110 TraesCS2B01G444300 chr3B 88.462 52 4 2 645 695 642815951 642815901 7.390000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G444300 chr2B 637106035 637108508 2473 True 4569 4569 100.000 1 2474 1 chr2B.!!$R4 2473
1 TraesCS2B01G444300 chr2B 637100611 637101171 560 True 545 545 84.175 901 1494 1 chr2B.!!$R3 593
2 TraesCS2B01G444300 chr2D 535670523 535671172 649 True 1003 1003 94.632 858 1503 1 chr2D.!!$R3 645
3 TraesCS2B01G444300 chr2D 535731250 535734038 2788 True 741 944 86.711 1 1486 2 chr2D.!!$R5 1485
4 TraesCS2B01G444300 chr2D 535629983 535630487 504 True 640 640 89.546 700 1205 1 chr2D.!!$R2 505
5 TraesCS2B01G444300 chr2A 678821473 678821986 513 True 464 464 84.121 1002 1494 1 chr2A.!!$R1 492
6 TraesCS2B01G444300 chr7A 711581836 711582383 547 False 226 226 75.390 15 563 1 chr7A.!!$F4 548

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
870 2293 0.039764 GGCCTAGGGTTCTGCCTTTT 59.96 55.0 11.72 0.0 40.77 2.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1829 3301 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.0 0.0 0.0 0.0 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 0.875059 CTTTGTCGGGTCTTTGAGGC 59.125 55.000 0.00 0.00 0.00 4.70
65 66 2.227388 GAGTTCGACCCTTCAACTCGTA 59.773 50.000 0.00 0.00 37.40 3.43
67 68 4.012374 AGTTCGACCCTTCAACTCGTATA 58.988 43.478 0.00 0.00 0.00 1.47
72 73 5.808540 TCGACCCTTCAACTCGTATATTTTG 59.191 40.000 0.00 0.00 0.00 2.44
73 74 5.006358 CGACCCTTCAACTCGTATATTTTGG 59.994 44.000 0.00 0.00 0.00 3.28
74 75 5.190677 ACCCTTCAACTCGTATATTTTGGG 58.809 41.667 0.00 0.00 36.06 4.12
75 76 4.578928 CCCTTCAACTCGTATATTTTGGGG 59.421 45.833 0.00 0.00 0.00 4.96
108 109 3.057386 TCGCGTCTTACAAACATAGGTCA 60.057 43.478 5.77 0.00 0.00 4.02
144 145 0.179043 TTTCACAGCCCACGCAACTA 60.179 50.000 0.00 0.00 37.52 2.24
258 264 4.460034 TGCGTGGAACTACATGTAGTAAGA 59.540 41.667 33.12 19.13 44.96 2.10
272 278 7.565398 ACATGTAGTAAGATGGATGGACTAAGT 59.435 37.037 0.00 0.00 30.69 2.24
273 279 7.973048 TGTAGTAAGATGGATGGACTAAGTT 57.027 36.000 0.00 0.00 0.00 2.66
275 281 5.675538 AGTAAGATGGATGGACTAAGTTGC 58.324 41.667 0.00 0.00 0.00 4.17
415 443 4.835678 TCATACCTTAAAACCCCTCGAAC 58.164 43.478 0.00 0.00 0.00 3.95
425 453 2.423577 ACCCCTCGAACGATGAAAAAG 58.576 47.619 0.00 0.00 0.00 2.27
450 478 6.683974 AGATTGAATAATTCACGGACCTTG 57.316 37.500 0.00 0.00 39.87 3.61
529 557 1.285280 ATCCCCTCGGTCAATGAACA 58.715 50.000 0.00 0.00 0.00 3.18
539 567 6.371548 CCTCGGTCAATGAACAGAAAAATAGA 59.628 38.462 0.00 0.00 0.00 1.98
541 569 7.158697 TCGGTCAATGAACAGAAAAATAGAGA 58.841 34.615 0.00 0.00 0.00 3.10
571 599 2.264005 TCACACGTGGCAAAACCTAT 57.736 45.000 21.57 0.00 40.22 2.57
579 607 4.142469 ACGTGGCAAAACCTATCTAAATGC 60.142 41.667 0.00 0.00 40.22 3.56
589 617 4.241681 CCTATCTAAATGCTCCTTCTCGC 58.758 47.826 0.00 0.00 0.00 5.03
590 618 3.827008 ATCTAAATGCTCCTTCTCGCA 57.173 42.857 0.00 0.00 40.87 5.10
591 619 3.610040 TCTAAATGCTCCTTCTCGCAA 57.390 42.857 0.00 0.00 39.89 4.85
594 622 2.119801 AATGCTCCTTCTCGCAATGT 57.880 45.000 0.00 0.00 39.89 2.71
595 623 1.376543 ATGCTCCTTCTCGCAATGTG 58.623 50.000 0.00 0.00 39.89 3.21
596 624 0.674581 TGCTCCTTCTCGCAATGTGG 60.675 55.000 0.00 0.00 32.40 4.17
653 699 2.512485 TTTCCTCTTACAACGCACGA 57.488 45.000 0.00 0.00 0.00 4.35
672 718 5.881443 GCACGATATACATACTACTCCCTCT 59.119 44.000 0.00 0.00 0.00 3.69
730 2148 3.953775 CCGAGTTGGGCCTGGTGT 61.954 66.667 4.53 0.00 0.00 4.16
742 2160 2.935849 GGCCTGGTGTTTGTTTTTCTTG 59.064 45.455 0.00 0.00 0.00 3.02
759 2181 3.892284 TCTTGTTGCTTTGGTGGAGTTA 58.108 40.909 0.00 0.00 0.00 2.24
764 2186 1.305930 GCTTTGGTGGAGTTAGGCCG 61.306 60.000 0.00 0.00 0.00 6.13
779 2201 1.609072 AGGCCGAAGAAACAAGAAAGC 59.391 47.619 0.00 0.00 0.00 3.51
783 2205 1.663161 CGAAGAAACAAGAAAGCGGCC 60.663 52.381 0.00 0.00 0.00 6.13
863 2286 1.652306 AGAACTAGGGCCTAGGGTTCT 59.348 52.381 36.98 32.60 38.30 3.01
870 2293 0.039764 GGCCTAGGGTTCTGCCTTTT 59.960 55.000 11.72 0.00 40.77 2.27
953 2381 0.958382 CCTGCGATTCCACCCGAAAA 60.958 55.000 0.00 0.00 33.08 2.29
984 2412 3.114616 CGAGTTGAGGTGCGGCAG 61.115 66.667 1.18 0.00 0.00 4.85
1021 2449 0.955919 GGCCGACAAGGAGGAGTTTG 60.956 60.000 0.00 0.00 45.00 2.93
1472 2944 2.666317 TGATGAGGAGGTTGAGCGATA 58.334 47.619 0.00 0.00 0.00 2.92
1488 2960 1.869767 CGATAATGAGGTTGCTCTGGC 59.130 52.381 0.00 0.00 39.26 4.85
1503 2975 2.894126 CTCTGGCATATACTTCCTCCGT 59.106 50.000 0.00 0.00 0.00 4.69
1504 2976 3.305720 TCTGGCATATACTTCCTCCGTT 58.694 45.455 0.00 0.00 0.00 4.44
1505 2977 3.709653 TCTGGCATATACTTCCTCCGTTT 59.290 43.478 0.00 0.00 0.00 3.60
1506 2978 4.058817 CTGGCATATACTTCCTCCGTTTC 58.941 47.826 0.00 0.00 0.00 2.78
1507 2979 3.709653 TGGCATATACTTCCTCCGTTTCT 59.290 43.478 0.00 0.00 0.00 2.52
1508 2980 4.897076 TGGCATATACTTCCTCCGTTTCTA 59.103 41.667 0.00 0.00 0.00 2.10
1509 2981 5.364446 TGGCATATACTTCCTCCGTTTCTAA 59.636 40.000 0.00 0.00 0.00 2.10
1510 2982 6.126997 TGGCATATACTTCCTCCGTTTCTAAA 60.127 38.462 0.00 0.00 0.00 1.85
1511 2983 6.935208 GGCATATACTTCCTCCGTTTCTAAAT 59.065 38.462 0.00 0.00 0.00 1.40
1512 2984 8.092687 GGCATATACTTCCTCCGTTTCTAAATA 58.907 37.037 0.00 0.00 0.00 1.40
1513 2985 8.923683 GCATATACTTCCTCCGTTTCTAAATAC 58.076 37.037 0.00 0.00 0.00 1.89
1517 2989 6.404708 ACTTCCTCCGTTTCTAAATACTTCC 58.595 40.000 0.00 0.00 0.00 3.46
1518 2990 6.212993 ACTTCCTCCGTTTCTAAATACTTCCT 59.787 38.462 0.00 0.00 0.00 3.36
1519 2991 6.616237 TCCTCCGTTTCTAAATACTTCCTT 57.384 37.500 0.00 0.00 0.00 3.36
1520 2992 6.637657 TCCTCCGTTTCTAAATACTTCCTTC 58.362 40.000 0.00 0.00 0.00 3.46
1521 2993 5.519206 CCTCCGTTTCTAAATACTTCCTTCG 59.481 44.000 0.00 0.00 0.00 3.79
1522 2994 6.029346 TCCGTTTCTAAATACTTCCTTCGT 57.971 37.500 0.00 0.00 0.00 3.85
1523 2995 6.095377 TCCGTTTCTAAATACTTCCTTCGTC 58.905 40.000 0.00 0.00 0.00 4.20
1524 2996 5.290400 CCGTTTCTAAATACTTCCTTCGTCC 59.710 44.000 0.00 0.00 0.00 4.79
1525 2997 5.290400 CGTTTCTAAATACTTCCTTCGTCCC 59.710 44.000 0.00 0.00 0.00 4.46
1526 2998 6.168389 GTTTCTAAATACTTCCTTCGTCCCA 58.832 40.000 0.00 0.00 0.00 4.37
1527 2999 6.363167 TTCTAAATACTTCCTTCGTCCCAA 57.637 37.500 0.00 0.00 0.00 4.12
1528 3000 6.363167 TCTAAATACTTCCTTCGTCCCAAA 57.637 37.500 0.00 0.00 0.00 3.28
1529 3001 6.771573 TCTAAATACTTCCTTCGTCCCAAAA 58.228 36.000 0.00 0.00 0.00 2.44
1530 3002 7.399634 TCTAAATACTTCCTTCGTCCCAAAAT 58.600 34.615 0.00 0.00 0.00 1.82
1531 3003 8.542080 TCTAAATACTTCCTTCGTCCCAAAATA 58.458 33.333 0.00 0.00 0.00 1.40
1532 3004 9.338622 CTAAATACTTCCTTCGTCCCAAAATAT 57.661 33.333 0.00 0.00 0.00 1.28
1533 3005 8.589701 AAATACTTCCTTCGTCCCAAAATATT 57.410 30.769 0.00 0.00 0.00 1.28
1534 3006 8.589701 AATACTTCCTTCGTCCCAAAATATTT 57.410 30.769 0.00 0.00 0.00 1.40
1535 3007 6.267496 ACTTCCTTCGTCCCAAAATATTTG 57.733 37.500 0.39 0.00 0.00 2.32
1536 3008 5.773176 ACTTCCTTCGTCCCAAAATATTTGT 59.227 36.000 0.39 0.00 0.00 2.83
1537 3009 5.890424 TCCTTCGTCCCAAAATATTTGTC 57.110 39.130 0.39 0.00 0.00 3.18
1538 3010 5.566469 TCCTTCGTCCCAAAATATTTGTCT 58.434 37.500 0.39 0.00 0.00 3.41
1539 3011 6.713276 TCCTTCGTCCCAAAATATTTGTCTA 58.287 36.000 0.39 0.00 0.00 2.59
1540 3012 6.821665 TCCTTCGTCCCAAAATATTTGTCTAG 59.178 38.462 0.39 0.00 0.00 2.43
1541 3013 6.821665 CCTTCGTCCCAAAATATTTGTCTAGA 59.178 38.462 0.39 0.00 0.00 2.43
1542 3014 7.499232 CCTTCGTCCCAAAATATTTGTCTAGAT 59.501 37.037 0.39 0.00 0.00 1.98
1543 3015 9.542462 CTTCGTCCCAAAATATTTGTCTAGATA 57.458 33.333 0.39 0.00 0.00 1.98
1544 3016 8.882415 TCGTCCCAAAATATTTGTCTAGATAC 57.118 34.615 0.39 0.00 0.00 2.24
1545 3017 8.479689 TCGTCCCAAAATATTTGTCTAGATACA 58.520 33.333 0.39 0.00 0.00 2.29
1546 3018 9.104965 CGTCCCAAAATATTTGTCTAGATACAA 57.895 33.333 0.39 0.00 37.58 2.41
1619 3091 9.810545 AATTTAAGACAAAAATTCTGAAACGGA 57.189 25.926 0.00 0.00 32.43 4.69
1620 3092 8.850454 TTTAAGACAAAAATTCTGAAACGGAG 57.150 30.769 0.00 0.00 0.00 4.63
1622 3094 5.821204 AGACAAAAATTCTGAAACGGAGTG 58.179 37.500 0.00 0.00 45.00 3.51
1623 3095 5.588648 AGACAAAAATTCTGAAACGGAGTGA 59.411 36.000 0.00 0.00 45.00 3.41
1624 3096 5.821204 ACAAAAATTCTGAAACGGAGTGAG 58.179 37.500 0.00 0.00 45.00 3.51
1625 3097 5.357032 ACAAAAATTCTGAAACGGAGTGAGT 59.643 36.000 0.00 0.00 45.00 3.41
1626 3098 6.540914 ACAAAAATTCTGAAACGGAGTGAGTA 59.459 34.615 0.00 0.00 45.00 2.59
1627 3099 7.228706 ACAAAAATTCTGAAACGGAGTGAGTAT 59.771 33.333 0.00 0.00 45.00 2.12
1628 3100 8.717821 CAAAAATTCTGAAACGGAGTGAGTATA 58.282 33.333 0.00 0.00 45.00 1.47
1629 3101 8.842358 AAAATTCTGAAACGGAGTGAGTATAA 57.158 30.769 0.00 0.00 45.00 0.98
1630 3102 8.480643 AAATTCTGAAACGGAGTGAGTATAAG 57.519 34.615 0.00 0.00 45.00 1.73
1631 3103 6.585695 TTCTGAAACGGAGTGAGTATAAGT 57.414 37.500 0.00 0.00 45.00 2.24
1632 3104 6.585695 TCTGAAACGGAGTGAGTATAAGTT 57.414 37.500 0.00 0.00 45.00 2.66
1633 3105 6.989659 TCTGAAACGGAGTGAGTATAAGTTT 58.010 36.000 0.00 0.00 45.00 2.66
1634 3106 7.439381 TCTGAAACGGAGTGAGTATAAGTTTT 58.561 34.615 0.00 0.00 45.00 2.43
1635 3107 7.929785 TCTGAAACGGAGTGAGTATAAGTTTTT 59.070 33.333 0.00 0.00 45.00 1.94
1659 3131 8.896320 TTTTAGAGATTGCACTACAAACTACA 57.104 30.769 0.00 0.00 41.09 2.74
1660 3132 9.502091 TTTTAGAGATTGCACTACAAACTACAT 57.498 29.630 0.00 0.00 41.09 2.29
1662 3134 9.582431 TTAGAGATTGCACTACAAACTACATAC 57.418 33.333 0.00 0.00 41.09 2.39
1663 3135 6.752351 AGAGATTGCACTACAAACTACATACG 59.248 38.462 0.00 0.00 41.09 3.06
1664 3136 5.810587 AGATTGCACTACAAACTACATACGG 59.189 40.000 0.00 0.00 42.86 4.02
1665 3137 4.787260 TGCACTACAAACTACATACGGA 57.213 40.909 0.00 0.00 0.00 4.69
1666 3138 4.487948 TGCACTACAAACTACATACGGAC 58.512 43.478 0.00 0.00 0.00 4.79
1667 3139 3.545078 GCACTACAAACTACATACGGACG 59.455 47.826 0.00 0.00 0.00 4.79
1668 3140 4.100529 CACTACAAACTACATACGGACGG 58.899 47.826 0.00 0.00 0.00 4.79
1669 3141 4.009675 ACTACAAACTACATACGGACGGA 58.990 43.478 0.00 0.00 0.00 4.69
1670 3142 3.221964 ACAAACTACATACGGACGGAC 57.778 47.619 0.00 0.00 0.00 4.79
1671 3143 2.179589 CAAACTACATACGGACGGACG 58.820 52.381 0.00 0.00 40.31 4.79
1725 3197 9.309516 TCACTCATTTTATTTCGTATGTACTCC 57.690 33.333 0.00 0.00 0.00 3.85
1726 3198 8.548721 CACTCATTTTATTTCGTATGTACTCCC 58.451 37.037 0.00 0.00 0.00 4.30
1727 3199 8.483758 ACTCATTTTATTTCGTATGTACTCCCT 58.516 33.333 0.00 0.00 0.00 4.20
1728 3200 8.882415 TCATTTTATTTCGTATGTACTCCCTC 57.118 34.615 0.00 0.00 0.00 4.30
1729 3201 7.929785 TCATTTTATTTCGTATGTACTCCCTCC 59.070 37.037 0.00 0.00 0.00 4.30
1730 3202 5.443185 TTATTTCGTATGTACTCCCTCCG 57.557 43.478 0.00 0.00 0.00 4.63
1731 3203 2.425143 TTCGTATGTACTCCCTCCGT 57.575 50.000 0.00 0.00 0.00 4.69
1732 3204 1.959042 TCGTATGTACTCCCTCCGTC 58.041 55.000 0.00 0.00 0.00 4.79
1733 3205 0.950116 CGTATGTACTCCCTCCGTCC 59.050 60.000 0.00 0.00 0.00 4.79
1734 3206 1.748244 CGTATGTACTCCCTCCGTCCA 60.748 57.143 0.00 0.00 0.00 4.02
1735 3207 1.955080 GTATGTACTCCCTCCGTCCAG 59.045 57.143 0.00 0.00 0.00 3.86
1736 3208 0.629596 ATGTACTCCCTCCGTCCAGA 59.370 55.000 0.00 0.00 0.00 3.86
1737 3209 0.406750 TGTACTCCCTCCGTCCAGAA 59.593 55.000 0.00 0.00 0.00 3.02
1738 3210 1.203087 TGTACTCCCTCCGTCCAGAAA 60.203 52.381 0.00 0.00 0.00 2.52
1739 3211 2.108970 GTACTCCCTCCGTCCAGAAAT 58.891 52.381 0.00 0.00 0.00 2.17
1740 3212 2.544844 ACTCCCTCCGTCCAGAAATA 57.455 50.000 0.00 0.00 0.00 1.40
1741 3213 3.047695 ACTCCCTCCGTCCAGAAATAT 57.952 47.619 0.00 0.00 0.00 1.28
1742 3214 3.385115 ACTCCCTCCGTCCAGAAATATT 58.615 45.455 0.00 0.00 0.00 1.28
1743 3215 3.780850 ACTCCCTCCGTCCAGAAATATTT 59.219 43.478 0.00 0.00 0.00 1.40
1744 3216 4.130118 CTCCCTCCGTCCAGAAATATTTG 58.870 47.826 5.17 0.00 0.00 2.32
1745 3217 3.521937 TCCCTCCGTCCAGAAATATTTGT 59.478 43.478 5.17 0.00 0.00 2.83
1746 3218 3.877508 CCCTCCGTCCAGAAATATTTGTC 59.122 47.826 5.17 0.00 0.00 3.18
1747 3219 4.513442 CCTCCGTCCAGAAATATTTGTCA 58.487 43.478 5.17 0.00 0.00 3.58
1748 3220 5.126067 CCTCCGTCCAGAAATATTTGTCAT 58.874 41.667 5.17 0.00 0.00 3.06
1749 3221 5.237344 CCTCCGTCCAGAAATATTTGTCATC 59.763 44.000 5.17 0.00 0.00 2.92
1750 3222 5.739959 TCCGTCCAGAAATATTTGTCATCA 58.260 37.500 5.17 0.00 0.00 3.07
1751 3223 6.176896 TCCGTCCAGAAATATTTGTCATCAA 58.823 36.000 5.17 0.00 0.00 2.57
1752 3224 6.657117 TCCGTCCAGAAATATTTGTCATCAAA 59.343 34.615 5.17 0.00 45.71 2.69
1753 3225 7.175816 TCCGTCCAGAAATATTTGTCATCAAAA 59.824 33.333 5.17 0.00 44.97 2.44
1754 3226 7.975616 CCGTCCAGAAATATTTGTCATCAAAAT 59.024 33.333 5.17 0.00 44.97 1.82
1755 3227 8.800972 CGTCCAGAAATATTTGTCATCAAAATG 58.199 33.333 5.17 0.00 44.97 2.32
1756 3228 9.859427 GTCCAGAAATATTTGTCATCAAAATGA 57.141 29.630 5.17 0.00 44.97 2.57
1767 3239 9.709495 TTTGTCATCAAAATGAATAAAAGAGGG 57.291 29.630 0.00 0.00 43.42 4.30
1768 3240 8.421249 TGTCATCAAAATGAATAAAAGAGGGT 57.579 30.769 0.00 0.00 43.42 4.34
1769 3241 8.306038 TGTCATCAAAATGAATAAAAGAGGGTG 58.694 33.333 0.00 0.00 43.42 4.61
1770 3242 8.306761 GTCATCAAAATGAATAAAAGAGGGTGT 58.693 33.333 0.00 0.00 43.42 4.16
1771 3243 9.527157 TCATCAAAATGAATAAAAGAGGGTGTA 57.473 29.630 0.00 0.00 38.97 2.90
1774 3246 9.753674 TCAAAATGAATAAAAGAGGGTGTATCT 57.246 29.630 0.00 0.00 0.00 1.98
1780 3252 9.213777 TGAATAAAAGAGGGTGTATCTAGATGT 57.786 33.333 15.79 0.00 0.00 3.06
1788 3260 9.884814 AGAGGGTGTATCTAGATGTATTTTAGT 57.115 33.333 15.79 0.00 0.00 2.24
1829 3301 9.829507 TTTTTGTCCATTTTGATGACAACTATT 57.170 25.926 3.97 0.00 35.79 1.73
1830 3302 9.829507 TTTTGTCCATTTTGATGACAACTATTT 57.170 25.926 3.97 0.00 35.79 1.40
1831 3303 9.829507 TTTGTCCATTTTGATGACAACTATTTT 57.170 25.926 3.97 0.00 35.79 1.82
1832 3304 9.474920 TTGTCCATTTTGATGACAACTATTTTC 57.525 29.630 0.00 0.00 35.63 2.29
1833 3305 7.807433 TGTCCATTTTGATGACAACTATTTTCG 59.193 33.333 0.00 0.00 35.63 3.46
1834 3306 7.273381 GTCCATTTTGATGACAACTATTTTCGG 59.727 37.037 0.00 0.00 35.63 4.30
1835 3307 7.175816 TCCATTTTGATGACAACTATTTTCGGA 59.824 33.333 0.00 0.00 35.63 4.55
1836 3308 7.273381 CCATTTTGATGACAACTATTTTCGGAC 59.727 37.037 0.00 0.00 35.63 4.79
1837 3309 5.524511 TTGATGACAACTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
1838 3310 3.930229 TGATGACAACTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
1839 3311 3.663995 TGACAACTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
1840 3312 3.581755 TGACAACTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
1841 3313 2.928116 GACAACTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
1842 3314 2.277084 CAACTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
1843 3315 1.856629 ACTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
1844 3316 1.755380 ACTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
1845 3317 1.755380 CTATTTTCGGACGGAGGGAGT 59.245 52.381 0.00 0.00 0.00 3.85
1846 3318 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
1847 3319 1.180029 TTTTCGGACGGAGGGAGTAG 58.820 55.000 0.00 0.00 0.00 2.57
1848 3320 0.038744 TTTCGGACGGAGGGAGTAGT 59.961 55.000 0.00 0.00 0.00 2.73
1849 3321 0.038744 TTCGGACGGAGGGAGTAGTT 59.961 55.000 0.00 0.00 0.00 2.24
1850 3322 0.393537 TCGGACGGAGGGAGTAGTTC 60.394 60.000 0.00 0.00 0.00 3.01
1851 3323 0.679002 CGGACGGAGGGAGTAGTTCA 60.679 60.000 0.00 0.00 0.00 3.18
1852 3324 1.777941 GGACGGAGGGAGTAGTTCAT 58.222 55.000 0.00 0.00 0.00 2.57
1853 3325 2.747467 CGGACGGAGGGAGTAGTTCATA 60.747 54.545 0.00 0.00 0.00 2.15
1854 3326 3.498334 GGACGGAGGGAGTAGTTCATAT 58.502 50.000 0.00 0.00 0.00 1.78
1855 3327 3.896272 GGACGGAGGGAGTAGTTCATATT 59.104 47.826 0.00 0.00 0.00 1.28
1856 3328 4.344390 GGACGGAGGGAGTAGTTCATATTT 59.656 45.833 0.00 0.00 0.00 1.40
1857 3329 5.509332 GGACGGAGGGAGTAGTTCATATTTC 60.509 48.000 0.00 0.00 0.00 2.17
1858 3330 4.960469 ACGGAGGGAGTAGTTCATATTTCA 59.040 41.667 0.00 0.00 0.00 2.69
1859 3331 5.424252 ACGGAGGGAGTAGTTCATATTTCAA 59.576 40.000 0.00 0.00 0.00 2.69
1860 3332 5.753921 CGGAGGGAGTAGTTCATATTTCAAC 59.246 44.000 0.00 0.00 0.00 3.18
1861 3333 6.056236 GGAGGGAGTAGTTCATATTTCAACC 58.944 44.000 0.00 0.00 0.00 3.77
1862 3334 6.126739 GGAGGGAGTAGTTCATATTTCAACCT 60.127 42.308 0.00 0.00 0.00 3.50
1863 3335 6.890293 AGGGAGTAGTTCATATTTCAACCTC 58.110 40.000 0.00 0.00 0.00 3.85
1864 3336 6.674419 AGGGAGTAGTTCATATTTCAACCTCT 59.326 38.462 0.00 0.00 0.00 3.69
1865 3337 7.844779 AGGGAGTAGTTCATATTTCAACCTCTA 59.155 37.037 0.00 0.00 0.00 2.43
1866 3338 8.483758 GGGAGTAGTTCATATTTCAACCTCTAA 58.516 37.037 0.00 0.00 0.00 2.10
1867 3339 9.886132 GGAGTAGTTCATATTTCAACCTCTAAA 57.114 33.333 0.00 0.00 0.00 1.85
1892 3364 9.813826 AAATGACTTATATTTAGGAATGGAGGG 57.186 33.333 0.00 0.00 0.00 4.30
1893 3365 8.757307 ATGACTTATATTTAGGAATGGAGGGA 57.243 34.615 0.00 0.00 0.00 4.20
1894 3366 8.207350 TGACTTATATTTAGGAATGGAGGGAG 57.793 38.462 0.00 0.00 0.00 4.30
1895 3367 7.794683 TGACTTATATTTAGGAATGGAGGGAGT 59.205 37.037 0.00 0.00 0.00 3.85
1896 3368 9.322769 GACTTATATTTAGGAATGGAGGGAGTA 57.677 37.037 0.00 0.00 0.00 2.59
1897 3369 9.860393 ACTTATATTTAGGAATGGAGGGAGTAT 57.140 33.333 0.00 0.00 0.00 2.12
1918 3390 8.064336 AGTATATCCATCTAATGTACGGAACC 57.936 38.462 0.00 0.00 0.00 3.62
1919 3391 6.928348 ATATCCATCTAATGTACGGAACCA 57.072 37.500 0.00 0.00 0.00 3.67
1920 3392 5.825593 ATCCATCTAATGTACGGAACCAT 57.174 39.130 0.00 0.00 0.00 3.55
1921 3393 5.623956 TCCATCTAATGTACGGAACCATT 57.376 39.130 0.00 0.00 35.55 3.16
1922 3394 5.607477 TCCATCTAATGTACGGAACCATTC 58.393 41.667 0.00 0.00 33.54 2.67
1923 3395 5.365605 TCCATCTAATGTACGGAACCATTCT 59.634 40.000 0.00 0.00 33.54 2.40
1924 3396 5.696724 CCATCTAATGTACGGAACCATTCTC 59.303 44.000 0.00 0.00 33.54 2.87
1925 3397 5.272283 TCTAATGTACGGAACCATTCTCC 57.728 43.478 0.00 0.00 33.54 3.71
1926 3398 4.960469 TCTAATGTACGGAACCATTCTCCT 59.040 41.667 0.00 0.00 33.54 3.69
1927 3399 6.131264 TCTAATGTACGGAACCATTCTCCTA 58.869 40.000 0.00 0.00 33.54 2.94
1928 3400 5.687166 AATGTACGGAACCATTCTCCTAA 57.313 39.130 0.00 0.00 0.00 2.69
1929 3401 5.687166 ATGTACGGAACCATTCTCCTAAA 57.313 39.130 0.00 0.00 0.00 1.85
1930 3402 5.080969 TGTACGGAACCATTCTCCTAAAG 57.919 43.478 0.00 0.00 0.00 1.85
1931 3403 3.629142 ACGGAACCATTCTCCTAAAGG 57.371 47.619 0.00 0.00 0.00 3.11
1932 3404 2.910977 ACGGAACCATTCTCCTAAAGGT 59.089 45.455 0.00 0.00 36.34 3.50
1933 3405 3.055312 ACGGAACCATTCTCCTAAAGGTC 60.055 47.826 0.00 0.00 36.34 3.85
1934 3406 3.055385 CGGAACCATTCTCCTAAAGGTCA 60.055 47.826 0.00 0.00 36.34 4.02
1935 3407 4.384208 CGGAACCATTCTCCTAAAGGTCAT 60.384 45.833 0.00 0.00 36.34 3.06
1936 3408 5.163343 CGGAACCATTCTCCTAAAGGTCATA 60.163 44.000 0.00 0.00 36.34 2.15
1937 3409 6.631766 CGGAACCATTCTCCTAAAGGTCATAA 60.632 42.308 0.00 0.00 36.34 1.90
1938 3410 6.542735 GGAACCATTCTCCTAAAGGTCATAAC 59.457 42.308 0.00 0.00 36.34 1.89
1939 3411 6.893020 ACCATTCTCCTAAAGGTCATAACT 57.107 37.500 0.00 0.00 36.34 2.24
1940 3412 7.272144 ACCATTCTCCTAAAGGTCATAACTT 57.728 36.000 0.00 0.00 36.34 2.66
1941 3413 7.112779 ACCATTCTCCTAAAGGTCATAACTTG 58.887 38.462 0.00 0.00 36.34 3.16
1942 3414 7.112779 CCATTCTCCTAAAGGTCATAACTTGT 58.887 38.462 0.00 0.00 36.34 3.16
1943 3415 8.265055 CCATTCTCCTAAAGGTCATAACTTGTA 58.735 37.037 0.00 0.00 36.34 2.41
1944 3416 9.319143 CATTCTCCTAAAGGTCATAACTTGTAG 57.681 37.037 0.00 0.00 36.34 2.74
1945 3417 8.431910 TTCTCCTAAAGGTCATAACTTGTAGT 57.568 34.615 0.00 0.00 36.34 2.73
1946 3418 8.064336 TCTCCTAAAGGTCATAACTTGTAGTC 57.936 38.462 0.00 0.00 36.34 2.59
1947 3419 7.123847 TCTCCTAAAGGTCATAACTTGTAGTCC 59.876 40.741 0.00 0.00 36.34 3.85
1948 3420 6.727231 TCCTAAAGGTCATAACTTGTAGTCCA 59.273 38.462 0.00 0.00 36.34 4.02
1949 3421 7.402071 TCCTAAAGGTCATAACTTGTAGTCCAT 59.598 37.037 0.00 0.00 36.34 3.41
1950 3422 8.047310 CCTAAAGGTCATAACTTGTAGTCCATT 58.953 37.037 0.00 0.00 0.00 3.16
1951 3423 7.687941 AAAGGTCATAACTTGTAGTCCATTG 57.312 36.000 0.00 0.00 0.00 2.82
1952 3424 6.620877 AGGTCATAACTTGTAGTCCATTGA 57.379 37.500 0.00 0.00 0.00 2.57
1953 3425 7.200434 AGGTCATAACTTGTAGTCCATTGAT 57.800 36.000 0.00 0.00 0.00 2.57
1954 3426 7.633789 AGGTCATAACTTGTAGTCCATTGATT 58.366 34.615 0.00 0.00 0.00 2.57
1955 3427 7.554118 AGGTCATAACTTGTAGTCCATTGATTG 59.446 37.037 0.00 0.00 0.00 2.67
1956 3428 7.552687 GGTCATAACTTGTAGTCCATTGATTGA 59.447 37.037 0.00 0.00 0.00 2.57
1957 3429 8.391106 GTCATAACTTGTAGTCCATTGATTGAC 58.609 37.037 0.00 0.00 0.00 3.18
1958 3430 7.552687 TCATAACTTGTAGTCCATTGATTGACC 59.447 37.037 0.00 0.00 31.76 4.02
1959 3431 4.589908 ACTTGTAGTCCATTGATTGACCC 58.410 43.478 0.00 0.00 31.76 4.46
1960 3432 3.644966 TGTAGTCCATTGATTGACCCC 57.355 47.619 0.00 0.00 31.76 4.95
1961 3433 2.093181 TGTAGTCCATTGATTGACCCCG 60.093 50.000 0.00 0.00 31.76 5.73
1962 3434 0.991920 AGTCCATTGATTGACCCCGT 59.008 50.000 0.00 0.00 31.76 5.28
1963 3435 2.193127 AGTCCATTGATTGACCCCGTA 58.807 47.619 0.00 0.00 31.76 4.02
1964 3436 2.574369 AGTCCATTGATTGACCCCGTAA 59.426 45.455 0.00 0.00 31.76 3.18
1965 3437 2.943033 GTCCATTGATTGACCCCGTAAG 59.057 50.000 0.00 0.00 0.00 2.34
1966 3438 2.841266 TCCATTGATTGACCCCGTAAGA 59.159 45.455 0.00 0.00 43.02 2.10
1967 3439 3.118408 TCCATTGATTGACCCCGTAAGAG 60.118 47.826 0.00 0.00 43.02 2.85
1968 3440 2.396590 TTGATTGACCCCGTAAGAGC 57.603 50.000 0.00 0.00 43.02 4.09
1969 3441 1.271856 TGATTGACCCCGTAAGAGCA 58.728 50.000 0.00 0.00 43.02 4.26
1970 3442 1.837439 TGATTGACCCCGTAAGAGCAT 59.163 47.619 0.00 0.00 43.02 3.79
1971 3443 2.158957 TGATTGACCCCGTAAGAGCATC 60.159 50.000 0.00 0.00 43.02 3.91
1982 3454 4.334837 GAGCATCTCCAGCTACGC 57.665 61.111 0.00 0.00 43.58 4.42
1983 3455 1.300542 GAGCATCTCCAGCTACGCC 60.301 63.158 0.00 0.00 43.58 5.68
1984 3456 2.280457 GCATCTCCAGCTACGCCC 60.280 66.667 0.00 0.00 0.00 6.13
1985 3457 2.423446 CATCTCCAGCTACGCCCC 59.577 66.667 0.00 0.00 0.00 5.80
1986 3458 2.041922 ATCTCCAGCTACGCCCCA 60.042 61.111 0.00 0.00 0.00 4.96
1987 3459 2.136878 ATCTCCAGCTACGCCCCAG 61.137 63.158 0.00 0.00 0.00 4.45
1988 3460 2.589610 ATCTCCAGCTACGCCCCAGA 62.590 60.000 0.00 0.00 0.00 3.86
1989 3461 2.284331 TCCAGCTACGCCCCAGAA 60.284 61.111 0.00 0.00 0.00 3.02
1990 3462 1.689233 TCCAGCTACGCCCCAGAAT 60.689 57.895 0.00 0.00 0.00 2.40
1991 3463 1.524621 CCAGCTACGCCCCAGAATG 60.525 63.158 0.00 0.00 0.00 2.67
2007 3479 2.204291 TGGCCTCCCCAGGTGAAT 60.204 61.111 3.32 0.00 42.74 2.57
2008 3480 1.856873 TGGCCTCCCCAGGTGAATT 60.857 57.895 3.32 0.00 42.74 2.17
2009 3481 1.388133 GGCCTCCCCAGGTGAATTT 59.612 57.895 0.00 0.00 42.74 1.82
2010 3482 0.252239 GGCCTCCCCAGGTGAATTTT 60.252 55.000 0.00 0.00 42.74 1.82
2011 3483 1.644509 GCCTCCCCAGGTGAATTTTT 58.355 50.000 0.00 0.00 42.74 1.94
2025 3497 3.889044 TTTTTGCGCCGGCGTTGA 61.889 55.556 45.02 29.72 44.10 3.18
2026 3498 3.411418 TTTTTGCGCCGGCGTTGAA 62.411 52.632 45.02 32.97 44.10 2.69
2027 3499 2.884087 TTTTTGCGCCGGCGTTGAAA 62.884 50.000 45.02 35.76 44.10 2.69
2028 3500 2.884087 TTTTGCGCCGGCGTTGAAAA 62.884 50.000 45.02 37.62 44.10 2.29
2029 3501 2.884087 TTTGCGCCGGCGTTGAAAAA 62.884 50.000 45.02 31.86 44.10 1.94
2063 3535 3.061848 CGCCGGGGCAAGTGATTT 61.062 61.111 5.22 0.00 42.06 2.17
2064 3536 2.635443 CGCCGGGGCAAGTGATTTT 61.635 57.895 5.22 0.00 42.06 1.82
2065 3537 1.671166 GCCGGGGCAAGTGATTTTT 59.329 52.632 2.18 0.00 41.49 1.94
2066 3538 0.670239 GCCGGGGCAAGTGATTTTTG 60.670 55.000 2.18 0.00 41.49 2.44
2071 3543 2.794941 GCAAGTGATTTTTGCGCGA 58.205 47.368 12.10 0.00 41.16 5.87
2072 3544 1.127701 GCAAGTGATTTTTGCGCGAA 58.872 45.000 12.10 5.81 41.16 4.70
2073 3545 1.123038 GCAAGTGATTTTTGCGCGAAG 59.877 47.619 12.10 0.00 41.16 3.79
2123 3595 2.956964 CGCTTCGTCGCCCTCATC 60.957 66.667 0.00 0.00 0.00 2.92
2124 3596 2.956964 GCTTCGTCGCCCTCATCG 60.957 66.667 0.00 0.00 0.00 3.84
2125 3597 2.956964 CTTCGTCGCCCTCATCGC 60.957 66.667 0.00 0.00 0.00 4.58
2126 3598 4.508128 TTCGTCGCCCTCATCGCC 62.508 66.667 0.00 0.00 0.00 5.54
2128 3600 4.933064 CGTCGCCCTCATCGCCTC 62.933 72.222 0.00 0.00 0.00 4.70
2129 3601 4.933064 GTCGCCCTCATCGCCTCG 62.933 72.222 0.00 0.00 0.00 4.63
2132 3604 4.162690 GCCCTCATCGCCTCGGTT 62.163 66.667 0.00 0.00 0.00 4.44
2133 3605 2.584608 CCCTCATCGCCTCGGTTT 59.415 61.111 0.00 0.00 0.00 3.27
2134 3606 1.521681 CCCTCATCGCCTCGGTTTC 60.522 63.158 0.00 0.00 0.00 2.78
2135 3607 1.517832 CCTCATCGCCTCGGTTTCT 59.482 57.895 0.00 0.00 0.00 2.52
2136 3608 0.807667 CCTCATCGCCTCGGTTTCTG 60.808 60.000 0.00 0.00 0.00 3.02
2137 3609 0.108615 CTCATCGCCTCGGTTTCTGT 60.109 55.000 0.00 0.00 0.00 3.41
2138 3610 0.389817 TCATCGCCTCGGTTTCTGTG 60.390 55.000 0.00 0.00 0.00 3.66
2139 3611 0.389817 CATCGCCTCGGTTTCTGTGA 60.390 55.000 0.00 0.00 0.00 3.58
2140 3612 0.108615 ATCGCCTCGGTTTCTGTGAG 60.109 55.000 0.00 0.00 0.00 3.51
2141 3613 1.176619 TCGCCTCGGTTTCTGTGAGA 61.177 55.000 0.00 0.00 31.31 3.27
2142 3614 0.319555 CGCCTCGGTTTCTGTGAGAA 60.320 55.000 0.00 0.00 31.28 2.87
2143 3615 1.673033 CGCCTCGGTTTCTGTGAGAAT 60.673 52.381 0.00 0.00 33.67 2.40
2144 3616 2.427506 GCCTCGGTTTCTGTGAGAATT 58.572 47.619 0.00 0.00 33.67 2.17
2145 3617 3.596214 GCCTCGGTTTCTGTGAGAATTA 58.404 45.455 0.00 0.00 33.67 1.40
2146 3618 4.000988 GCCTCGGTTTCTGTGAGAATTAA 58.999 43.478 0.00 0.00 33.67 1.40
2147 3619 4.636206 GCCTCGGTTTCTGTGAGAATTAAT 59.364 41.667 0.00 0.00 33.67 1.40
2148 3620 5.447818 GCCTCGGTTTCTGTGAGAATTAATG 60.448 44.000 0.00 0.00 33.67 1.90
2149 3621 5.447818 CCTCGGTTTCTGTGAGAATTAATGC 60.448 44.000 0.00 0.00 33.67 3.56
2150 3622 4.394920 TCGGTTTCTGTGAGAATTAATGCC 59.605 41.667 0.00 0.00 33.67 4.40
2151 3623 4.155826 CGGTTTCTGTGAGAATTAATGCCA 59.844 41.667 0.00 0.00 33.67 4.92
2152 3624 5.335583 CGGTTTCTGTGAGAATTAATGCCAA 60.336 40.000 0.00 0.00 33.67 4.52
2153 3625 6.095377 GGTTTCTGTGAGAATTAATGCCAAG 58.905 40.000 0.00 0.00 33.67 3.61
2154 3626 5.902613 TTCTGTGAGAATTAATGCCAAGG 57.097 39.130 0.00 0.00 0.00 3.61
2155 3627 3.696051 TCTGTGAGAATTAATGCCAAGGC 59.304 43.478 3.61 3.61 42.35 4.35
2156 3628 3.698040 CTGTGAGAATTAATGCCAAGGCT 59.302 43.478 12.96 0.00 42.51 4.58
2157 3629 3.444742 TGTGAGAATTAATGCCAAGGCTG 59.555 43.478 12.96 0.00 42.51 4.85
2158 3630 2.428171 TGAGAATTAATGCCAAGGCTGC 59.572 45.455 12.96 0.00 42.51 5.25
2159 3631 1.758862 AGAATTAATGCCAAGGCTGCC 59.241 47.619 11.65 11.65 42.51 4.85
2160 3632 0.461135 AATTAATGCCAAGGCTGCCG 59.539 50.000 13.96 0.00 42.51 5.69
2161 3633 2.019897 ATTAATGCCAAGGCTGCCGC 62.020 55.000 13.96 11.58 42.51 6.53
2162 3634 3.643595 TAATGCCAAGGCTGCCGCT 62.644 57.895 13.96 1.18 42.51 5.52
2178 3650 2.743928 CTGCCGGTCAGCCTTGTC 60.744 66.667 12.01 0.00 35.78 3.18
2179 3651 3.535629 CTGCCGGTCAGCCTTGTCA 62.536 63.158 12.01 0.00 35.78 3.58
2180 3652 2.045926 GCCGGTCAGCCTTGTCAT 60.046 61.111 1.90 0.00 0.00 3.06
2181 3653 1.675641 GCCGGTCAGCCTTGTCATT 60.676 57.895 1.90 0.00 0.00 2.57
2182 3654 1.926511 GCCGGTCAGCCTTGTCATTG 61.927 60.000 1.90 0.00 0.00 2.82
2183 3655 0.321564 CCGGTCAGCCTTGTCATTGA 60.322 55.000 0.00 0.00 0.00 2.57
2184 3656 1.679944 CCGGTCAGCCTTGTCATTGAT 60.680 52.381 0.00 0.00 0.00 2.57
2185 3657 2.086869 CGGTCAGCCTTGTCATTGATT 58.913 47.619 0.00 0.00 0.00 2.57
2186 3658 2.096496 CGGTCAGCCTTGTCATTGATTC 59.904 50.000 0.00 0.00 0.00 2.52
2187 3659 2.424956 GGTCAGCCTTGTCATTGATTCC 59.575 50.000 0.00 0.00 0.00 3.01
2188 3660 3.350833 GTCAGCCTTGTCATTGATTCCT 58.649 45.455 0.00 0.00 0.00 3.36
2189 3661 3.376546 GTCAGCCTTGTCATTGATTCCTC 59.623 47.826 0.00 0.00 0.00 3.71
2190 3662 3.009363 TCAGCCTTGTCATTGATTCCTCA 59.991 43.478 0.00 0.00 0.00 3.86
2191 3663 3.128242 CAGCCTTGTCATTGATTCCTCAC 59.872 47.826 0.00 0.00 0.00 3.51
2192 3664 2.096496 GCCTTGTCATTGATTCCTCACG 59.904 50.000 0.00 0.00 0.00 4.35
2193 3665 2.679837 CCTTGTCATTGATTCCTCACGG 59.320 50.000 0.00 0.00 0.00 4.94
2194 3666 2.401583 TGTCATTGATTCCTCACGGG 57.598 50.000 0.00 0.00 0.00 5.28
2195 3667 1.017387 GTCATTGATTCCTCACGGGC 58.983 55.000 0.00 0.00 34.39 6.13
2196 3668 0.461870 TCATTGATTCCTCACGGGCG 60.462 55.000 0.00 0.00 34.39 6.13
2197 3669 1.153168 ATTGATTCCTCACGGGCGG 60.153 57.895 0.00 0.00 34.39 6.13
2198 3670 3.969250 TTGATTCCTCACGGGCGGC 62.969 63.158 0.00 0.00 34.39 6.53
2261 3733 4.578898 CACACGGGCGCGGCTATA 62.579 66.667 32.30 0.00 0.00 1.31
2262 3734 3.612681 ACACGGGCGCGGCTATAT 61.613 61.111 32.30 13.18 0.00 0.86
2263 3735 2.270257 ACACGGGCGCGGCTATATA 61.270 57.895 32.30 0.00 0.00 0.86
2264 3736 1.080366 CACGGGCGCGGCTATATAA 60.080 57.895 32.30 0.00 0.00 0.98
2265 3737 1.076533 CACGGGCGCGGCTATATAAG 61.077 60.000 32.30 16.03 0.00 1.73
2304 3776 4.803908 GGCCACACCAGCCCTAGC 62.804 72.222 0.00 0.00 45.16 3.42
2305 3777 4.803908 GCCACACCAGCCCTAGCC 62.804 72.222 0.00 0.00 41.25 3.93
2306 3778 4.473520 CCACACCAGCCCTAGCCG 62.474 72.222 0.00 0.00 41.25 5.52
2316 3788 3.972276 CCTAGCCGCCGAGCTCTC 61.972 72.222 12.85 2.37 43.67 3.20
2317 3789 3.972276 CTAGCCGCCGAGCTCTCC 61.972 72.222 12.85 1.10 43.67 3.71
2322 3794 3.591835 CGCCGAGCTCTCCCTCTC 61.592 72.222 12.85 0.00 0.00 3.20
2323 3795 3.223589 GCCGAGCTCTCCCTCTCC 61.224 72.222 12.85 0.00 0.00 3.71
2324 3796 2.277072 CCGAGCTCTCCCTCTCCA 59.723 66.667 12.85 0.00 0.00 3.86
2325 3797 1.827789 CCGAGCTCTCCCTCTCCAG 60.828 68.421 12.85 0.00 0.00 3.86
2326 3798 1.077068 CGAGCTCTCCCTCTCCAGT 60.077 63.158 12.85 0.00 0.00 4.00
2327 3799 1.383456 CGAGCTCTCCCTCTCCAGTG 61.383 65.000 12.85 0.00 0.00 3.66
2328 3800 1.675720 GAGCTCTCCCTCTCCAGTGC 61.676 65.000 6.43 0.00 0.00 4.40
2329 3801 3.074999 GCTCTCCCTCTCCAGTGCG 62.075 68.421 0.00 0.00 0.00 5.34
2330 3802 3.071206 TCTCCCTCTCCAGTGCGC 61.071 66.667 0.00 0.00 0.00 6.09
2331 3803 4.154347 CTCCCTCTCCAGTGCGCC 62.154 72.222 4.18 0.00 0.00 6.53
2354 3826 4.150454 CGAGCCCTCCCTCTCCCT 62.150 72.222 0.00 0.00 0.00 4.20
2355 3827 2.123033 GAGCCCTCCCTCTCCCTC 60.123 72.222 0.00 0.00 0.00 4.30
2356 3828 2.623431 AGCCCTCCCTCTCCCTCT 60.623 66.667 0.00 0.00 0.00 3.69
2357 3829 2.123033 GCCCTCCCTCTCCCTCTC 60.123 72.222 0.00 0.00 0.00 3.20
2358 3830 2.612251 CCCTCCCTCTCCCTCTCC 59.388 72.222 0.00 0.00 0.00 3.71
2359 3831 2.612251 CCTCCCTCTCCCTCTCCC 59.388 72.222 0.00 0.00 0.00 4.30
2360 3832 2.197324 CTCCCTCTCCCTCTCCCG 59.803 72.222 0.00 0.00 0.00 5.14
2361 3833 2.617538 TCCCTCTCCCTCTCCCGT 60.618 66.667 0.00 0.00 0.00 5.28
2362 3834 2.443016 CCCTCTCCCTCTCCCGTG 60.443 72.222 0.00 0.00 0.00 4.94
2363 3835 3.151022 CCTCTCCCTCTCCCGTGC 61.151 72.222 0.00 0.00 0.00 5.34
2364 3836 3.522731 CTCTCCCTCTCCCGTGCG 61.523 72.222 0.00 0.00 0.00 5.34
2386 3858 3.827898 CGTCGAGCCCTCCCTCAC 61.828 72.222 0.00 0.00 0.00 3.51
2387 3859 2.363147 GTCGAGCCCTCCCTCACT 60.363 66.667 0.00 0.00 0.00 3.41
2388 3860 2.043852 TCGAGCCCTCCCTCACTC 60.044 66.667 0.00 0.00 0.00 3.51
2389 3861 3.151022 CGAGCCCTCCCTCACTCC 61.151 72.222 0.00 0.00 0.00 3.85
2390 3862 3.151022 GAGCCCTCCCTCACTCCG 61.151 72.222 0.00 0.00 0.00 4.63
2391 3863 3.663815 GAGCCCTCCCTCACTCCGA 62.664 68.421 0.00 0.00 0.00 4.55
2392 3864 3.462678 GCCCTCCCTCACTCCGAC 61.463 72.222 0.00 0.00 0.00 4.79
2393 3865 2.037367 CCCTCCCTCACTCCGACA 59.963 66.667 0.00 0.00 0.00 4.35
2394 3866 2.352032 CCCTCCCTCACTCCGACAC 61.352 68.421 0.00 0.00 0.00 3.67
2395 3867 2.352032 CCTCCCTCACTCCGACACC 61.352 68.421 0.00 0.00 0.00 4.16
2396 3868 2.283676 TCCCTCACTCCGACACCC 60.284 66.667 0.00 0.00 0.00 4.61
2397 3869 3.760035 CCCTCACTCCGACACCCG 61.760 72.222 0.00 0.00 38.18 5.28
2398 3870 2.675423 CCTCACTCCGACACCCGA 60.675 66.667 0.00 0.00 41.76 5.14
2399 3871 2.052690 CCTCACTCCGACACCCGAT 61.053 63.158 0.00 0.00 41.76 4.18
2400 3872 1.139734 CTCACTCCGACACCCGATG 59.860 63.158 0.00 0.00 41.76 3.84
2401 3873 2.184322 CACTCCGACACCCGATGG 59.816 66.667 0.00 0.00 41.76 3.51
2402 3874 3.771160 ACTCCGACACCCGATGGC 61.771 66.667 0.00 0.00 41.76 4.40
2403 3875 4.530857 CTCCGACACCCGATGGCC 62.531 72.222 0.00 0.00 41.76 5.36
2412 3884 4.160635 CCGATGGCCGCACGTTTC 62.161 66.667 13.27 0.00 36.84 2.78
2413 3885 4.160635 CGATGGCCGCACGTTTCC 62.161 66.667 0.00 0.00 0.00 3.13
2414 3886 3.810896 GATGGCCGCACGTTTCCC 61.811 66.667 0.00 0.00 0.00 3.97
2472 3944 4.870305 CTCCACGAACAGGAGTCG 57.130 61.111 0.00 0.00 46.07 4.18
2473 3945 1.957562 CTCCACGAACAGGAGTCGT 59.042 57.895 0.00 0.00 46.07 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 2.103432 TCAAAGACCCGACAAAGTGCTA 59.897 45.455 0.00 0.00 0.00 3.49
40 41 2.076863 GTTGAAGGGTCGAACTCATGG 58.923 52.381 0.00 0.00 0.00 3.66
73 74 3.164026 ACGCGAGTAAAAATCCCCC 57.836 52.632 15.93 0.00 46.88 5.40
108 109 0.767833 AAAGGCCCAGGCACCAAAAT 60.768 50.000 11.50 0.00 44.11 1.82
144 145 1.677552 CAGGTAGTTGGGACGGCTT 59.322 57.895 0.00 0.00 0.00 4.35
237 241 5.977725 CCATCTTACTACATGTAGTTCCACG 59.022 44.000 36.44 23.51 43.35 4.94
258 264 4.508551 TCATGCAACTTAGTCCATCCAT 57.491 40.909 0.00 0.00 0.00 3.41
272 278 3.605726 ATCCATCCATCCTTCATGCAA 57.394 42.857 0.00 0.00 0.00 4.08
273 279 3.227614 CAATCCATCCATCCTTCATGCA 58.772 45.455 0.00 0.00 0.00 3.96
275 281 3.840991 ACCAATCCATCCATCCTTCATG 58.159 45.455 0.00 0.00 0.00 3.07
356 384 1.816224 AGTGAGGCGAGTCTTCTCTTC 59.184 52.381 9.85 5.04 38.45 2.87
425 453 7.280205 ACAAGGTCCGTGAATTATTCAATCTAC 59.720 37.037 12.15 5.95 42.15 2.59
438 466 0.679505 CTCCAGACAAGGTCCGTGAA 59.320 55.000 12.15 0.00 32.18 3.18
441 469 2.050269 CACTCCAGACAAGGTCCGT 58.950 57.895 0.00 0.00 32.18 4.69
450 478 3.003480 GTTAGGTCATTGCACTCCAGAC 58.997 50.000 0.00 0.00 0.00 3.51
539 567 5.182950 TGCCACGTGTGAAATAATCAATTCT 59.817 36.000 15.65 0.00 40.50 2.40
541 569 5.384063 TGCCACGTGTGAAATAATCAATT 57.616 34.783 15.65 0.00 40.50 2.32
571 599 3.610040 TTGCGAGAAGGAGCATTTAGA 57.390 42.857 0.00 0.00 43.42 2.10
579 607 2.099141 TTCCACATTGCGAGAAGGAG 57.901 50.000 0.00 0.00 0.00 3.69
589 617 7.959689 TTGGTGTGAATTATTTTCCACATTG 57.040 32.000 0.00 0.00 40.94 2.82
590 618 9.571816 AATTTGGTGTGAATTATTTTCCACATT 57.428 25.926 0.00 0.00 40.94 2.71
591 619 9.571816 AAATTTGGTGTGAATTATTTTCCACAT 57.428 25.926 0.00 0.00 40.94 3.21
647 693 4.634883 AGGGAGTAGTATGTATATCGTGCG 59.365 45.833 0.00 0.00 0.00 5.34
653 699 6.277283 TGGGACAGAGGGAGTAGTATGTATAT 59.723 42.308 0.00 0.00 0.00 0.86
730 2148 5.049129 CCACCAAAGCAACAAGAAAAACAAA 60.049 36.000 0.00 0.00 0.00 2.83
742 2160 1.269723 GCCTAACTCCACCAAAGCAAC 59.730 52.381 0.00 0.00 0.00 4.17
759 2181 1.609072 GCTTTCTTGTTTCTTCGGCCT 59.391 47.619 0.00 0.00 0.00 5.19
764 2186 1.663161 CGGCCGCTTTCTTGTTTCTTC 60.663 52.381 14.67 0.00 0.00 2.87
783 2205 1.739338 ATTCACTCTCGGGCTAGGCG 61.739 60.000 10.58 6.03 0.00 5.52
813 2235 7.036220 GGAGTCGGTATATATCACAATTCCTG 58.964 42.308 0.00 0.00 0.00 3.86
863 2286 1.006832 GCTCGCTCGATAAAAAGGCA 58.993 50.000 0.00 0.00 0.00 4.75
899 2322 3.245264 GGGGATTTTTCTCCAAGAGGACA 60.245 47.826 0.00 0.00 39.61 4.02
953 2381 0.036306 AACTCGCCGAGGAATTTGGT 59.964 50.000 19.61 0.00 33.35 3.67
983 2411 0.975135 CATGAGCGGATCCCTGATCT 59.025 55.000 6.06 0.00 38.91 2.75
984 2412 0.036577 CCATGAGCGGATCCCTGATC 60.037 60.000 6.06 1.72 38.25 2.92
1106 2534 0.034670 GGCTCCAGTTTGCTCTCCAT 60.035 55.000 0.00 0.00 0.00 3.41
1156 2584 4.641645 CGTGGCAGACCCCTTGCA 62.642 66.667 0.00 0.00 33.59 4.08
1494 2966 6.641474 AGGAAGTATTTAGAAACGGAGGAAG 58.359 40.000 0.00 0.00 0.00 3.46
1495 2967 6.616237 AGGAAGTATTTAGAAACGGAGGAA 57.384 37.500 0.00 0.00 0.00 3.36
1500 2972 5.290400 GGACGAAGGAAGTATTTAGAAACGG 59.710 44.000 0.00 0.00 0.00 4.44
1503 2975 6.363167 TGGGACGAAGGAAGTATTTAGAAA 57.637 37.500 0.00 0.00 0.00 2.52
1504 2976 6.363167 TTGGGACGAAGGAAGTATTTAGAA 57.637 37.500 0.00 0.00 0.00 2.10
1505 2977 6.363167 TTTGGGACGAAGGAAGTATTTAGA 57.637 37.500 0.00 0.00 0.00 2.10
1506 2978 7.625828 ATTTTGGGACGAAGGAAGTATTTAG 57.374 36.000 0.00 0.00 0.00 1.85
1507 2979 9.689501 AATATTTTGGGACGAAGGAAGTATTTA 57.310 29.630 0.00 0.00 0.00 1.40
1508 2980 8.589701 AATATTTTGGGACGAAGGAAGTATTT 57.410 30.769 0.00 0.00 0.00 1.40
1509 2981 8.466798 CAAATATTTTGGGACGAAGGAAGTATT 58.533 33.333 0.00 0.00 0.00 1.89
1510 2982 7.614192 ACAAATATTTTGGGACGAAGGAAGTAT 59.386 33.333 0.00 0.00 0.00 2.12
1511 2983 6.943718 ACAAATATTTTGGGACGAAGGAAGTA 59.056 34.615 0.00 0.00 0.00 2.24
1512 2984 5.773176 ACAAATATTTTGGGACGAAGGAAGT 59.227 36.000 0.00 0.00 0.00 3.01
1513 2985 6.151144 AGACAAATATTTTGGGACGAAGGAAG 59.849 38.462 0.00 0.00 0.00 3.46
1514 2986 6.007703 AGACAAATATTTTGGGACGAAGGAA 58.992 36.000 0.00 0.00 0.00 3.36
1515 2987 5.566469 AGACAAATATTTTGGGACGAAGGA 58.434 37.500 0.00 0.00 0.00 3.36
1516 2988 5.897377 AGACAAATATTTTGGGACGAAGG 57.103 39.130 0.00 0.00 0.00 3.46
1517 2989 7.843490 TCTAGACAAATATTTTGGGACGAAG 57.157 36.000 0.00 0.00 0.00 3.79
1518 2990 9.321562 GTATCTAGACAAATATTTTGGGACGAA 57.678 33.333 0.00 0.00 0.00 3.85
1519 2991 8.479689 TGTATCTAGACAAATATTTTGGGACGA 58.520 33.333 0.00 0.00 0.00 4.20
1520 2992 8.657074 TGTATCTAGACAAATATTTTGGGACG 57.343 34.615 0.00 0.00 0.00 4.79
1593 3065 9.810545 TCCGTTTCAGAATTTTTGTCTTAAATT 57.189 25.926 0.00 0.00 37.77 1.82
1594 3066 9.463443 CTCCGTTTCAGAATTTTTGTCTTAAAT 57.537 29.630 0.00 0.00 0.00 1.40
1595 3067 8.463607 ACTCCGTTTCAGAATTTTTGTCTTAAA 58.536 29.630 0.00 0.00 0.00 1.52
1596 3068 7.913297 CACTCCGTTTCAGAATTTTTGTCTTAA 59.087 33.333 0.00 0.00 0.00 1.85
1597 3069 7.281324 TCACTCCGTTTCAGAATTTTTGTCTTA 59.719 33.333 0.00 0.00 0.00 2.10
1598 3070 6.094881 TCACTCCGTTTCAGAATTTTTGTCTT 59.905 34.615 0.00 0.00 0.00 3.01
1599 3071 5.588648 TCACTCCGTTTCAGAATTTTTGTCT 59.411 36.000 0.00 0.00 0.00 3.41
1600 3072 5.816919 TCACTCCGTTTCAGAATTTTTGTC 58.183 37.500 0.00 0.00 0.00 3.18
1601 3073 5.357032 ACTCACTCCGTTTCAGAATTTTTGT 59.643 36.000 0.00 0.00 0.00 2.83
1602 3074 5.821204 ACTCACTCCGTTTCAGAATTTTTG 58.179 37.500 0.00 0.00 0.00 2.44
1603 3075 7.745620 ATACTCACTCCGTTTCAGAATTTTT 57.254 32.000 0.00 0.00 0.00 1.94
1604 3076 8.842358 TTATACTCACTCCGTTTCAGAATTTT 57.158 30.769 0.00 0.00 0.00 1.82
1605 3077 8.095169 ACTTATACTCACTCCGTTTCAGAATTT 58.905 33.333 0.00 0.00 0.00 1.82
1606 3078 7.612677 ACTTATACTCACTCCGTTTCAGAATT 58.387 34.615 0.00 0.00 0.00 2.17
1607 3079 7.171630 ACTTATACTCACTCCGTTTCAGAAT 57.828 36.000 0.00 0.00 0.00 2.40
1608 3080 6.585695 ACTTATACTCACTCCGTTTCAGAA 57.414 37.500 0.00 0.00 0.00 3.02
1609 3081 6.585695 AACTTATACTCACTCCGTTTCAGA 57.414 37.500 0.00 0.00 0.00 3.27
1610 3082 7.653767 AAAACTTATACTCACTCCGTTTCAG 57.346 36.000 0.00 0.00 0.00 3.02
1633 3105 9.332502 TGTAGTTTGTAGTGCAATCTCTAAAAA 57.667 29.630 7.69 0.00 37.97 1.94
1634 3106 8.896320 TGTAGTTTGTAGTGCAATCTCTAAAA 57.104 30.769 7.69 0.00 37.97 1.52
1636 3108 9.582431 GTATGTAGTTTGTAGTGCAATCTCTAA 57.418 33.333 7.69 0.00 37.97 2.10
1637 3109 7.913821 CGTATGTAGTTTGTAGTGCAATCTCTA 59.086 37.037 7.69 3.30 37.97 2.43
1638 3110 6.752351 CGTATGTAGTTTGTAGTGCAATCTCT 59.248 38.462 7.69 4.11 37.97 3.10
1639 3111 6.019801 CCGTATGTAGTTTGTAGTGCAATCTC 60.020 42.308 7.69 2.52 37.97 2.75
1640 3112 5.810587 CCGTATGTAGTTTGTAGTGCAATCT 59.189 40.000 9.16 9.16 39.60 2.40
1641 3113 5.808540 TCCGTATGTAGTTTGTAGTGCAATC 59.191 40.000 0.00 0.00 36.89 2.67
1642 3114 5.579511 GTCCGTATGTAGTTTGTAGTGCAAT 59.420 40.000 0.00 0.00 36.89 3.56
1643 3115 4.925054 GTCCGTATGTAGTTTGTAGTGCAA 59.075 41.667 0.00 0.00 34.87 4.08
1644 3116 4.487948 GTCCGTATGTAGTTTGTAGTGCA 58.512 43.478 0.00 0.00 0.00 4.57
1645 3117 3.545078 CGTCCGTATGTAGTTTGTAGTGC 59.455 47.826 0.00 0.00 0.00 4.40
1646 3118 4.100529 CCGTCCGTATGTAGTTTGTAGTG 58.899 47.826 0.00 0.00 0.00 2.74
1647 3119 4.009675 TCCGTCCGTATGTAGTTTGTAGT 58.990 43.478 0.00 0.00 0.00 2.73
1648 3120 4.346129 GTCCGTCCGTATGTAGTTTGTAG 58.654 47.826 0.00 0.00 0.00 2.74
1649 3121 3.181511 CGTCCGTCCGTATGTAGTTTGTA 60.182 47.826 0.00 0.00 0.00 2.41
1650 3122 2.414559 CGTCCGTCCGTATGTAGTTTGT 60.415 50.000 0.00 0.00 0.00 2.83
1651 3123 2.179589 CGTCCGTCCGTATGTAGTTTG 58.820 52.381 0.00 0.00 0.00 2.93
1652 3124 1.812571 ACGTCCGTCCGTATGTAGTTT 59.187 47.619 0.00 0.00 39.73 2.66
1653 3125 1.453155 ACGTCCGTCCGTATGTAGTT 58.547 50.000 0.00 0.00 39.73 2.24
1654 3126 2.309528 TACGTCCGTCCGTATGTAGT 57.690 50.000 0.00 0.00 42.00 2.73
1699 3171 9.309516 GGAGTACATACGAAATAAAATGAGTGA 57.690 33.333 0.00 0.00 0.00 3.41
1700 3172 8.548721 GGGAGTACATACGAAATAAAATGAGTG 58.451 37.037 0.00 0.00 0.00 3.51
1701 3173 8.483758 AGGGAGTACATACGAAATAAAATGAGT 58.516 33.333 0.00 0.00 0.00 3.41
1702 3174 8.888579 AGGGAGTACATACGAAATAAAATGAG 57.111 34.615 0.00 0.00 0.00 2.90
1703 3175 7.929785 GGAGGGAGTACATACGAAATAAAATGA 59.070 37.037 0.00 0.00 0.00 2.57
1704 3176 7.095774 CGGAGGGAGTACATACGAAATAAAATG 60.096 40.741 0.00 0.00 0.00 2.32
1705 3177 6.927381 CGGAGGGAGTACATACGAAATAAAAT 59.073 38.462 0.00 0.00 0.00 1.82
1706 3178 6.127366 ACGGAGGGAGTACATACGAAATAAAA 60.127 38.462 0.00 0.00 0.00 1.52
1707 3179 5.360714 ACGGAGGGAGTACATACGAAATAAA 59.639 40.000 0.00 0.00 0.00 1.40
1708 3180 4.889409 ACGGAGGGAGTACATACGAAATAA 59.111 41.667 0.00 0.00 0.00 1.40
1709 3181 4.464008 ACGGAGGGAGTACATACGAAATA 58.536 43.478 0.00 0.00 0.00 1.40
1710 3182 3.294214 ACGGAGGGAGTACATACGAAAT 58.706 45.455 0.00 0.00 0.00 2.17
1711 3183 2.684881 GACGGAGGGAGTACATACGAAA 59.315 50.000 0.00 0.00 0.00 3.46
1712 3184 2.292267 GACGGAGGGAGTACATACGAA 58.708 52.381 0.00 0.00 0.00 3.85
1713 3185 1.475751 GGACGGAGGGAGTACATACGA 60.476 57.143 0.00 0.00 0.00 3.43
1714 3186 0.950116 GGACGGAGGGAGTACATACG 59.050 60.000 0.00 0.00 0.00 3.06
1715 3187 1.955080 CTGGACGGAGGGAGTACATAC 59.045 57.143 0.00 0.00 31.16 2.39
1716 3188 1.848388 TCTGGACGGAGGGAGTACATA 59.152 52.381 0.00 0.00 31.16 2.29
1717 3189 0.629596 TCTGGACGGAGGGAGTACAT 59.370 55.000 0.00 0.00 31.16 2.29
1718 3190 0.406750 TTCTGGACGGAGGGAGTACA 59.593 55.000 0.00 0.00 0.00 2.90
1719 3191 1.553706 TTTCTGGACGGAGGGAGTAC 58.446 55.000 0.00 0.00 0.00 2.73
1720 3192 2.544844 ATTTCTGGACGGAGGGAGTA 57.455 50.000 0.00 0.00 0.00 2.59
1721 3193 2.544844 TATTTCTGGACGGAGGGAGT 57.455 50.000 0.00 0.00 0.00 3.85
1722 3194 4.130118 CAAATATTTCTGGACGGAGGGAG 58.870 47.826 0.00 0.00 0.00 4.30
1723 3195 3.521937 ACAAATATTTCTGGACGGAGGGA 59.478 43.478 0.00 0.00 0.00 4.20
1724 3196 3.877508 GACAAATATTTCTGGACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
1725 3197 4.513442 TGACAAATATTTCTGGACGGAGG 58.487 43.478 0.00 0.00 0.00 4.30
1726 3198 5.817296 TGATGACAAATATTTCTGGACGGAG 59.183 40.000 0.00 0.00 0.00 4.63
1727 3199 5.739959 TGATGACAAATATTTCTGGACGGA 58.260 37.500 0.00 0.00 0.00 4.69
1728 3200 6.435430 TTGATGACAAATATTTCTGGACGG 57.565 37.500 0.00 0.00 32.73 4.79
1729 3201 8.800972 CATTTTGATGACAAATATTTCTGGACG 58.199 33.333 0.00 0.00 43.99 4.79
1730 3202 9.859427 TCATTTTGATGACAAATATTTCTGGAC 57.141 29.630 0.00 0.00 43.99 4.02
1741 3213 9.709495 CCCTCTTTTATTCATTTTGATGACAAA 57.291 29.630 0.00 0.00 43.10 2.83
1742 3214 8.869109 ACCCTCTTTTATTCATTTTGATGACAA 58.131 29.630 0.00 0.00 0.00 3.18
1743 3215 8.306038 CACCCTCTTTTATTCATTTTGATGACA 58.694 33.333 0.00 0.00 0.00 3.58
1744 3216 8.306761 ACACCCTCTTTTATTCATTTTGATGAC 58.693 33.333 0.00 0.00 0.00 3.06
1745 3217 8.421249 ACACCCTCTTTTATTCATTTTGATGA 57.579 30.769 0.00 0.00 0.00 2.92
1748 3220 9.753674 AGATACACCCTCTTTTATTCATTTTGA 57.246 29.630 0.00 0.00 0.00 2.69
1754 3226 9.213777 ACATCTAGATACACCCTCTTTTATTCA 57.786 33.333 4.54 0.00 0.00 2.57
1762 3234 9.884814 ACTAAAATACATCTAGATACACCCTCT 57.115 33.333 4.54 0.00 0.00 3.69
1803 3275 9.829507 AATAGTTGTCATCAAAATGGACAAAAA 57.170 25.926 7.89 1.05 36.05 1.94
1804 3276 9.829507 AAATAGTTGTCATCAAAATGGACAAAA 57.170 25.926 7.89 1.36 36.05 2.44
1805 3277 9.829507 AAAATAGTTGTCATCAAAATGGACAAA 57.170 25.926 7.89 0.00 36.05 2.83
1806 3278 9.474920 GAAAATAGTTGTCATCAAAATGGACAA 57.525 29.630 0.00 0.00 35.20 3.18
1807 3279 7.807433 CGAAAATAGTTGTCATCAAAATGGACA 59.193 33.333 0.00 0.00 35.20 4.02
1808 3280 7.273381 CCGAAAATAGTTGTCATCAAAATGGAC 59.727 37.037 0.00 0.00 35.20 4.02
1809 3281 7.175816 TCCGAAAATAGTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 35.20 3.41
1810 3282 7.273381 GTCCGAAAATAGTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 35.20 3.16
1811 3283 7.007367 CGTCCGAAAATAGTTGTCATCAAAATG 59.993 37.037 0.00 0.00 35.20 2.32
1812 3284 7.021196 CGTCCGAAAATAGTTGTCATCAAAAT 58.979 34.615 0.00 0.00 35.20 1.82
1813 3285 6.367421 CGTCCGAAAATAGTTGTCATCAAAA 58.633 36.000 0.00 0.00 35.20 2.44
1814 3286 5.106869 CCGTCCGAAAATAGTTGTCATCAAA 60.107 40.000 0.00 0.00 35.20 2.69
1815 3287 4.390603 CCGTCCGAAAATAGTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
1816 3288 3.930229 CCGTCCGAAAATAGTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
1817 3289 4.178540 TCCGTCCGAAAATAGTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
1818 3290 4.181578 CTCCGTCCGAAAATAGTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
1819 3291 3.581755 CTCCGTCCGAAAATAGTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
1820 3292 2.928116 CCTCCGTCCGAAAATAGTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
1821 3293 2.354403 CCCTCCGTCCGAAAATAGTTGT 60.354 50.000 0.00 0.00 0.00 3.32
1822 3294 2.093869 TCCCTCCGTCCGAAAATAGTTG 60.094 50.000 0.00 0.00 0.00 3.16
1823 3295 2.167900 CTCCCTCCGTCCGAAAATAGTT 59.832 50.000 0.00 0.00 0.00 2.24
1824 3296 1.755380 CTCCCTCCGTCCGAAAATAGT 59.245 52.381 0.00 0.00 0.00 2.12
1825 3297 1.755380 ACTCCCTCCGTCCGAAAATAG 59.245 52.381 0.00 0.00 0.00 1.73
1826 3298 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
1827 3299 1.755380 CTACTCCCTCCGTCCGAAAAT 59.245 52.381 0.00 0.00 0.00 1.82
1828 3300 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
1829 3301 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
1830 3302 0.038744 AACTACTCCCTCCGTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
1831 3303 0.393537 GAACTACTCCCTCCGTCCGA 60.394 60.000 0.00 0.00 0.00 4.55
1832 3304 0.679002 TGAACTACTCCCTCCGTCCG 60.679 60.000 0.00 0.00 0.00 4.79
1833 3305 1.777941 ATGAACTACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
1834 3306 5.068723 TGAAATATGAACTACTCCCTCCGTC 59.931 44.000 0.00 0.00 0.00 4.79
1835 3307 4.960469 TGAAATATGAACTACTCCCTCCGT 59.040 41.667 0.00 0.00 0.00 4.69
1836 3308 5.531122 TGAAATATGAACTACTCCCTCCG 57.469 43.478 0.00 0.00 0.00 4.63
1837 3309 6.056236 GGTTGAAATATGAACTACTCCCTCC 58.944 44.000 0.00 0.00 0.00 4.30
1838 3310 6.890293 AGGTTGAAATATGAACTACTCCCTC 58.110 40.000 0.00 0.00 0.00 4.30
1839 3311 6.674419 AGAGGTTGAAATATGAACTACTCCCT 59.326 38.462 0.00 0.00 0.00 4.20
1840 3312 6.890293 AGAGGTTGAAATATGAACTACTCCC 58.110 40.000 0.00 0.00 0.00 4.30
1841 3313 9.886132 TTTAGAGGTTGAAATATGAACTACTCC 57.114 33.333 0.00 0.00 0.00 3.85
1866 3338 9.813826 CCCTCCATTCCTAAATATAAGTCATTT 57.186 33.333 0.00 0.00 0.00 2.32
1867 3339 9.182642 TCCCTCCATTCCTAAATATAAGTCATT 57.817 33.333 0.00 0.00 0.00 2.57
1868 3340 8.757307 TCCCTCCATTCCTAAATATAAGTCAT 57.243 34.615 0.00 0.00 0.00 3.06
1869 3341 7.794683 ACTCCCTCCATTCCTAAATATAAGTCA 59.205 37.037 0.00 0.00 0.00 3.41
1870 3342 8.208575 ACTCCCTCCATTCCTAAATATAAGTC 57.791 38.462 0.00 0.00 0.00 3.01
1871 3343 9.860393 ATACTCCCTCCATTCCTAAATATAAGT 57.140 33.333 0.00 0.00 0.00 2.24
1875 3347 9.453830 GGATATACTCCCTCCATTCCTAAATAT 57.546 37.037 0.00 0.00 38.19 1.28
1876 3348 8.414623 TGGATATACTCCCTCCATTCCTAAATA 58.585 37.037 0.00 0.00 44.23 1.40
1877 3349 7.263901 TGGATATACTCCCTCCATTCCTAAAT 58.736 38.462 0.00 0.00 44.23 1.40
1878 3350 6.639938 TGGATATACTCCCTCCATTCCTAAA 58.360 40.000 0.00 0.00 44.23 1.85
1879 3351 6.241223 TGGATATACTCCCTCCATTCCTAA 57.759 41.667 0.00 0.00 44.23 2.69
1880 3352 5.896530 TGGATATACTCCCTCCATTCCTA 57.103 43.478 0.00 0.00 44.23 2.94
1881 3353 4.785173 TGGATATACTCCCTCCATTCCT 57.215 45.455 0.00 0.00 44.23 3.36
1886 3358 6.815880 ACATTAGATGGATATACTCCCTCCA 58.184 40.000 0.00 0.00 44.23 3.86
1887 3359 7.013464 CGTACATTAGATGGATATACTCCCTCC 59.987 44.444 0.00 0.00 44.23 4.30
1888 3360 7.013464 CCGTACATTAGATGGATATACTCCCTC 59.987 44.444 0.00 0.00 44.23 4.30
1889 3361 6.834451 CCGTACATTAGATGGATATACTCCCT 59.166 42.308 0.00 0.00 44.23 4.20
1890 3362 6.832384 TCCGTACATTAGATGGATATACTCCC 59.168 42.308 0.00 0.00 44.23 4.30
1891 3363 7.876936 TCCGTACATTAGATGGATATACTCC 57.123 40.000 0.00 0.00 45.19 3.85
1892 3364 8.189460 GGTTCCGTACATTAGATGGATATACTC 58.811 40.741 0.00 0.00 33.60 2.59
1893 3365 7.672660 TGGTTCCGTACATTAGATGGATATACT 59.327 37.037 0.00 0.00 33.60 2.12
1894 3366 7.833786 TGGTTCCGTACATTAGATGGATATAC 58.166 38.462 0.00 0.00 33.60 1.47
1895 3367 8.603898 ATGGTTCCGTACATTAGATGGATATA 57.396 34.615 0.00 0.00 33.60 0.86
1896 3368 6.928348 TGGTTCCGTACATTAGATGGATAT 57.072 37.500 0.00 0.00 33.60 1.63
1897 3369 6.928348 ATGGTTCCGTACATTAGATGGATA 57.072 37.500 0.00 0.00 33.60 2.59
1898 3370 5.825593 ATGGTTCCGTACATTAGATGGAT 57.174 39.130 0.00 0.00 33.60 3.41
1899 3371 5.365605 AGAATGGTTCCGTACATTAGATGGA 59.634 40.000 0.00 0.00 37.43 3.41
1900 3372 5.611374 AGAATGGTTCCGTACATTAGATGG 58.389 41.667 0.00 0.00 37.43 3.51
1901 3373 5.696724 GGAGAATGGTTCCGTACATTAGATG 59.303 44.000 0.00 0.00 37.43 2.90
1902 3374 5.602978 AGGAGAATGGTTCCGTACATTAGAT 59.397 40.000 0.00 0.00 39.77 1.98
1903 3375 4.960469 AGGAGAATGGTTCCGTACATTAGA 59.040 41.667 0.00 0.00 39.77 2.10
1904 3376 5.277857 AGGAGAATGGTTCCGTACATTAG 57.722 43.478 0.00 0.00 39.77 1.73
1905 3377 6.795144 TTAGGAGAATGGTTCCGTACATTA 57.205 37.500 0.00 0.00 39.77 1.90
1906 3378 5.687166 TTAGGAGAATGGTTCCGTACATT 57.313 39.130 0.00 0.00 39.77 2.71
1907 3379 5.396436 CCTTTAGGAGAATGGTTCCGTACAT 60.396 44.000 0.00 0.00 39.77 2.29
1908 3380 4.081309 CCTTTAGGAGAATGGTTCCGTACA 60.081 45.833 0.00 0.00 39.77 2.90
1909 3381 4.081254 ACCTTTAGGAGAATGGTTCCGTAC 60.081 45.833 2.06 0.00 39.77 3.67
1910 3382 4.098894 ACCTTTAGGAGAATGGTTCCGTA 58.901 43.478 2.06 0.00 39.77 4.02
1911 3383 2.910977 ACCTTTAGGAGAATGGTTCCGT 59.089 45.455 2.06 0.00 39.77 4.69
1912 3384 3.055385 TGACCTTTAGGAGAATGGTTCCG 60.055 47.826 2.06 0.00 39.77 4.30
1913 3385 4.569719 TGACCTTTAGGAGAATGGTTCC 57.430 45.455 2.06 0.00 38.94 3.62
1914 3386 7.339482 AGTTATGACCTTTAGGAGAATGGTTC 58.661 38.462 2.06 0.00 38.94 3.62
1915 3387 7.272144 AGTTATGACCTTTAGGAGAATGGTT 57.728 36.000 2.06 0.00 38.94 3.67
1916 3388 6.893020 AGTTATGACCTTTAGGAGAATGGT 57.107 37.500 2.06 0.00 38.94 3.55
1917 3389 7.112779 ACAAGTTATGACCTTTAGGAGAATGG 58.887 38.462 2.06 0.00 38.94 3.16
1918 3390 9.319143 CTACAAGTTATGACCTTTAGGAGAATG 57.681 37.037 2.06 0.00 38.94 2.67
1919 3391 9.047947 ACTACAAGTTATGACCTTTAGGAGAAT 57.952 33.333 2.06 0.00 38.94 2.40
1920 3392 8.431910 ACTACAAGTTATGACCTTTAGGAGAA 57.568 34.615 2.06 0.00 38.94 2.87
1921 3393 7.123847 GGACTACAAGTTATGACCTTTAGGAGA 59.876 40.741 2.06 0.00 38.94 3.71
1922 3394 7.093465 TGGACTACAAGTTATGACCTTTAGGAG 60.093 40.741 2.06 0.00 38.94 3.69
1923 3395 6.727231 TGGACTACAAGTTATGACCTTTAGGA 59.273 38.462 2.06 0.00 38.94 2.94
1924 3396 6.942976 TGGACTACAAGTTATGACCTTTAGG 58.057 40.000 0.00 0.00 42.17 2.69
1925 3397 8.883731 CAATGGACTACAAGTTATGACCTTTAG 58.116 37.037 0.00 0.00 0.00 1.85
1926 3398 8.598916 TCAATGGACTACAAGTTATGACCTTTA 58.401 33.333 0.00 0.00 0.00 1.85
1927 3399 7.458397 TCAATGGACTACAAGTTATGACCTTT 58.542 34.615 0.00 0.00 0.00 3.11
1928 3400 7.016153 TCAATGGACTACAAGTTATGACCTT 57.984 36.000 0.00 0.00 0.00 3.50
1929 3401 6.620877 TCAATGGACTACAAGTTATGACCT 57.379 37.500 0.00 0.00 0.00 3.85
1930 3402 7.552687 TCAATCAATGGACTACAAGTTATGACC 59.447 37.037 0.00 0.00 0.00 4.02
1931 3403 8.391106 GTCAATCAATGGACTACAAGTTATGAC 58.609 37.037 0.00 0.00 0.00 3.06
1932 3404 7.552687 GGTCAATCAATGGACTACAAGTTATGA 59.447 37.037 0.00 0.00 34.49 2.15
1933 3405 7.201732 GGGTCAATCAATGGACTACAAGTTATG 60.202 40.741 0.00 0.00 34.49 1.90
1934 3406 6.828785 GGGTCAATCAATGGACTACAAGTTAT 59.171 38.462 0.00 0.00 34.49 1.89
1935 3407 6.177610 GGGTCAATCAATGGACTACAAGTTA 58.822 40.000 0.00 0.00 34.49 2.24
1936 3408 5.010282 GGGTCAATCAATGGACTACAAGTT 58.990 41.667 0.00 0.00 34.49 2.66
1937 3409 4.567747 GGGGTCAATCAATGGACTACAAGT 60.568 45.833 0.00 0.00 34.49 3.16
1938 3410 3.947834 GGGGTCAATCAATGGACTACAAG 59.052 47.826 0.00 0.00 34.49 3.16
1939 3411 3.621214 CGGGGTCAATCAATGGACTACAA 60.621 47.826 0.00 0.00 34.49 2.41
1940 3412 2.093181 CGGGGTCAATCAATGGACTACA 60.093 50.000 0.00 0.00 34.49 2.74
1941 3413 2.093128 ACGGGGTCAATCAATGGACTAC 60.093 50.000 0.00 0.00 34.49 2.73
1942 3414 2.193127 ACGGGGTCAATCAATGGACTA 58.807 47.619 0.00 0.00 34.49 2.59
1943 3415 0.991920 ACGGGGTCAATCAATGGACT 59.008 50.000 0.00 0.00 34.49 3.85
1944 3416 2.702592 TACGGGGTCAATCAATGGAC 57.297 50.000 0.00 0.00 0.00 4.02
1945 3417 2.841266 TCTTACGGGGTCAATCAATGGA 59.159 45.455 0.00 0.00 0.00 3.41
1946 3418 3.206150 CTCTTACGGGGTCAATCAATGG 58.794 50.000 0.00 0.00 0.00 3.16
1947 3419 2.614057 GCTCTTACGGGGTCAATCAATG 59.386 50.000 0.00 0.00 0.00 2.82
1948 3420 2.238646 TGCTCTTACGGGGTCAATCAAT 59.761 45.455 0.00 0.00 0.00 2.57
1949 3421 1.626321 TGCTCTTACGGGGTCAATCAA 59.374 47.619 0.00 0.00 0.00 2.57
1950 3422 1.271856 TGCTCTTACGGGGTCAATCA 58.728 50.000 0.00 0.00 0.00 2.57
1951 3423 2.103263 AGATGCTCTTACGGGGTCAATC 59.897 50.000 0.00 0.00 0.00 2.67
1952 3424 2.103263 GAGATGCTCTTACGGGGTCAAT 59.897 50.000 0.00 0.00 0.00 2.57
1953 3425 1.480954 GAGATGCTCTTACGGGGTCAA 59.519 52.381 0.00 0.00 0.00 3.18
1954 3426 1.112113 GAGATGCTCTTACGGGGTCA 58.888 55.000 0.00 0.00 0.00 4.02
1955 3427 0.389757 GGAGATGCTCTTACGGGGTC 59.610 60.000 0.00 0.00 0.00 4.46
1956 3428 0.325296 TGGAGATGCTCTTACGGGGT 60.325 55.000 0.00 0.00 0.00 4.95
1957 3429 0.390860 CTGGAGATGCTCTTACGGGG 59.609 60.000 0.00 0.00 0.00 5.73
1958 3430 0.249657 GCTGGAGATGCTCTTACGGG 60.250 60.000 0.00 0.00 0.00 5.28
1959 3431 0.749649 AGCTGGAGATGCTCTTACGG 59.250 55.000 0.00 0.00 35.67 4.02
1960 3432 2.603412 CGTAGCTGGAGATGCTCTTACG 60.603 54.545 0.00 0.00 41.46 3.18
1961 3433 3.006659 CGTAGCTGGAGATGCTCTTAC 57.993 52.381 0.00 0.00 41.46 2.34
1982 3454 3.825623 GGGGAGGCCATTCTGGGG 61.826 72.222 5.01 0.00 38.19 4.96
1983 3455 3.023116 TGGGGAGGCCATTCTGGG 61.023 66.667 5.01 0.00 38.19 4.45
1984 3456 2.599597 CTGGGGAGGCCATTCTGG 59.400 66.667 5.01 0.00 41.55 3.86
1985 3457 2.311854 ACCTGGGGAGGCCATTCTG 61.312 63.158 5.01 0.00 0.00 3.02
1986 3458 2.128226 ACCTGGGGAGGCCATTCT 59.872 61.111 5.01 0.00 0.00 2.40
1987 3459 1.863155 TTCACCTGGGGAGGCCATTC 61.863 60.000 5.01 0.00 0.00 2.67
1988 3460 1.224003 ATTCACCTGGGGAGGCCATT 61.224 55.000 5.01 0.00 0.00 3.16
1989 3461 1.224003 AATTCACCTGGGGAGGCCAT 61.224 55.000 5.01 0.00 0.00 4.40
1990 3462 1.442886 AAATTCACCTGGGGAGGCCA 61.443 55.000 5.01 0.00 0.00 5.36
1991 3463 0.252239 AAAATTCACCTGGGGAGGCC 60.252 55.000 0.00 0.00 0.00 5.19
1992 3464 1.644509 AAAAATTCACCTGGGGAGGC 58.355 50.000 0.00 0.00 0.00 4.70
2008 3480 2.884087 TTTCAACGCCGGCGCAAAAA 62.884 50.000 46.22 35.77 44.19 1.94
2009 3481 2.884087 TTTTCAACGCCGGCGCAAAA 62.884 50.000 46.22 38.27 44.19 2.44
2010 3482 2.884087 TTTTTCAACGCCGGCGCAAA 62.884 50.000 46.22 35.63 44.19 3.68
2011 3483 3.411418 TTTTTCAACGCCGGCGCAA 62.411 52.632 46.22 32.55 44.19 4.85
2012 3484 3.889044 TTTTTCAACGCCGGCGCA 61.889 55.556 46.22 28.91 44.19 6.09
2026 3498 2.917227 CCCCAGCGGGCTGTTTTT 60.917 61.111 18.48 0.00 44.50 1.94
2046 3518 2.153547 AAAAATCACTTGCCCCGGCG 62.154 55.000 0.00 0.00 45.51 6.46
2047 3519 0.670239 CAAAAATCACTTGCCCCGGC 60.670 55.000 0.00 0.00 42.35 6.13
2048 3520 0.670239 GCAAAAATCACTTGCCCCGG 60.670 55.000 0.00 0.00 42.74 5.73
2049 3521 1.008361 CGCAAAAATCACTTGCCCCG 61.008 55.000 2.21 0.00 45.15 5.73
2050 3522 1.291184 GCGCAAAAATCACTTGCCCC 61.291 55.000 0.30 0.00 45.15 5.80
2051 3523 1.616872 CGCGCAAAAATCACTTGCCC 61.617 55.000 8.75 0.00 45.15 5.36
2052 3524 0.662970 TCGCGCAAAAATCACTTGCC 60.663 50.000 8.75 0.00 45.15 4.52
2053 3525 1.123038 CTTCGCGCAAAAATCACTTGC 59.877 47.619 8.75 0.00 44.62 4.01
2054 3526 1.123038 GCTTCGCGCAAAAATCACTTG 59.877 47.619 8.75 0.00 38.92 3.16
2055 3527 1.408422 GCTTCGCGCAAAAATCACTT 58.592 45.000 8.75 0.00 38.92 3.16
2056 3528 3.092081 GCTTCGCGCAAAAATCACT 57.908 47.368 8.75 0.00 38.92 3.41
2087 3559 4.838486 CCGTCTCGCTGACTCGGC 62.838 72.222 0.00 0.00 43.25 5.54
2088 3560 4.180946 CCCGTCTCGCTGACTCGG 62.181 72.222 6.78 0.00 43.25 4.63
2089 3561 4.838486 GCCCGTCTCGCTGACTCG 62.838 72.222 6.78 0.00 43.25 4.18
2090 3562 4.838486 CGCCCGTCTCGCTGACTC 62.838 72.222 6.78 0.00 43.25 3.36
2106 3578 2.956964 GATGAGGGCGACGAAGCG 60.957 66.667 0.00 0.00 38.18 4.68
2107 3579 2.956964 CGATGAGGGCGACGAAGC 60.957 66.667 0.00 0.00 0.00 3.86
2108 3580 2.956964 GCGATGAGGGCGACGAAG 60.957 66.667 0.00 0.00 0.00 3.79
2109 3581 4.508128 GGCGATGAGGGCGACGAA 62.508 66.667 0.00 0.00 0.00 3.85
2111 3583 4.933064 GAGGCGATGAGGGCGACG 62.933 72.222 0.00 0.00 42.78 5.12
2112 3584 4.933064 CGAGGCGATGAGGGCGAC 62.933 72.222 0.00 0.00 37.59 5.19
2115 3587 3.682292 AAACCGAGGCGATGAGGGC 62.682 63.158 0.00 0.00 0.00 5.19
2116 3588 1.521681 GAAACCGAGGCGATGAGGG 60.522 63.158 0.00 0.00 0.00 4.30
2117 3589 0.807667 CAGAAACCGAGGCGATGAGG 60.808 60.000 0.00 0.00 0.00 3.86
2118 3590 0.108615 ACAGAAACCGAGGCGATGAG 60.109 55.000 0.00 0.00 0.00 2.90
2119 3591 0.389817 CACAGAAACCGAGGCGATGA 60.390 55.000 0.00 0.00 0.00 2.92
2120 3592 0.389817 TCACAGAAACCGAGGCGATG 60.390 55.000 0.00 0.00 0.00 3.84
2121 3593 0.108615 CTCACAGAAACCGAGGCGAT 60.109 55.000 0.00 0.00 0.00 4.58
2122 3594 1.176619 TCTCACAGAAACCGAGGCGA 61.177 55.000 0.00 0.00 0.00 5.54
2123 3595 0.319555 TTCTCACAGAAACCGAGGCG 60.320 55.000 0.00 0.00 29.99 5.52
2124 3596 2.100605 ATTCTCACAGAAACCGAGGC 57.899 50.000 0.00 0.00 37.82 4.70
2125 3597 5.447818 GCATTAATTCTCACAGAAACCGAGG 60.448 44.000 0.00 0.00 37.82 4.63
2126 3598 5.447818 GGCATTAATTCTCACAGAAACCGAG 60.448 44.000 0.00 0.00 37.82 4.63
2127 3599 4.394920 GGCATTAATTCTCACAGAAACCGA 59.605 41.667 0.00 0.00 37.82 4.69
2128 3600 4.155826 TGGCATTAATTCTCACAGAAACCG 59.844 41.667 0.00 0.00 37.82 4.44
2129 3601 5.643379 TGGCATTAATTCTCACAGAAACC 57.357 39.130 0.00 0.00 37.82 3.27
2130 3602 6.095377 CCTTGGCATTAATTCTCACAGAAAC 58.905 40.000 0.00 0.00 37.82 2.78
2131 3603 5.336690 GCCTTGGCATTAATTCTCACAGAAA 60.337 40.000 6.79 0.00 37.82 2.52
2132 3604 4.158394 GCCTTGGCATTAATTCTCACAGAA 59.842 41.667 6.79 0.00 38.78 3.02
2133 3605 3.696051 GCCTTGGCATTAATTCTCACAGA 59.304 43.478 6.79 0.00 0.00 3.41
2134 3606 3.698040 AGCCTTGGCATTAATTCTCACAG 59.302 43.478 14.54 0.00 0.00 3.66
2135 3607 3.444742 CAGCCTTGGCATTAATTCTCACA 59.555 43.478 14.54 0.00 0.00 3.58
2136 3608 3.736126 GCAGCCTTGGCATTAATTCTCAC 60.736 47.826 14.54 0.00 0.00 3.51
2137 3609 2.428171 GCAGCCTTGGCATTAATTCTCA 59.572 45.455 14.54 0.00 0.00 3.27
2138 3610 3.089573 GCAGCCTTGGCATTAATTCTC 57.910 47.619 14.54 0.00 0.00 2.87
2162 3634 2.410322 AATGACAAGGCTGACCGGCA 62.410 55.000 0.00 0.00 42.76 5.69
2163 3635 1.675641 AATGACAAGGCTGACCGGC 60.676 57.895 0.00 0.00 42.76 6.13
2164 3636 0.321564 TCAATGACAAGGCTGACCGG 60.322 55.000 0.00 0.00 42.76 5.28
2165 3637 1.742761 ATCAATGACAAGGCTGACCG 58.257 50.000 0.00 0.00 42.76 4.79
2166 3638 2.424956 GGAATCAATGACAAGGCTGACC 59.575 50.000 0.00 0.00 0.00 4.02
2167 3639 3.350833 AGGAATCAATGACAAGGCTGAC 58.649 45.455 0.00 0.00 0.00 3.51
2168 3640 3.009363 TGAGGAATCAATGACAAGGCTGA 59.991 43.478 0.00 0.00 0.00 4.26
2169 3641 3.128242 GTGAGGAATCAATGACAAGGCTG 59.872 47.826 0.00 0.00 0.00 4.85
2170 3642 3.350833 GTGAGGAATCAATGACAAGGCT 58.649 45.455 0.00 0.00 0.00 4.58
2171 3643 2.096496 CGTGAGGAATCAATGACAAGGC 59.904 50.000 0.00 0.00 0.00 4.35
2244 3716 2.480853 TATATAGCCGCGCCCGTGTG 62.481 60.000 0.00 0.00 0.00 3.82
2245 3717 1.808531 TTATATAGCCGCGCCCGTGT 61.809 55.000 0.00 0.00 0.00 4.49
2246 3718 1.076533 CTTATATAGCCGCGCCCGTG 61.077 60.000 0.00 0.00 0.00 4.94
2247 3719 1.214589 CTTATATAGCCGCGCCCGT 59.785 57.895 0.00 0.00 0.00 5.28
2248 3720 2.165301 GCTTATATAGCCGCGCCCG 61.165 63.158 0.00 0.00 44.48 6.13
2249 3721 3.795638 GCTTATATAGCCGCGCCC 58.204 61.111 0.00 0.00 44.48 6.13
2288 3760 4.803908 GGCTAGGGCTGGTGTGGC 62.804 72.222 0.00 0.00 38.73 5.01
2289 3761 4.473520 CGGCTAGGGCTGGTGTGG 62.474 72.222 0.00 0.00 40.90 4.17
2299 3771 3.972276 GAGAGCTCGGCGGCTAGG 61.972 72.222 20.03 0.71 43.20 3.02
2300 3772 3.972276 GGAGAGCTCGGCGGCTAG 61.972 72.222 20.03 6.80 43.20 3.42
2305 3777 3.591835 GAGAGGGAGAGCTCGGCG 61.592 72.222 8.37 0.00 0.00 6.46
2306 3778 3.223589 GGAGAGGGAGAGCTCGGC 61.224 72.222 8.37 4.49 31.95 5.54
2307 3779 1.827789 CTGGAGAGGGAGAGCTCGG 60.828 68.421 8.37 0.00 31.95 4.63
2308 3780 1.077068 ACTGGAGAGGGAGAGCTCG 60.077 63.158 8.37 0.00 31.95 5.03
2309 3781 1.675720 GCACTGGAGAGGGAGAGCTC 61.676 65.000 5.27 5.27 0.00 4.09
2310 3782 1.685421 GCACTGGAGAGGGAGAGCT 60.685 63.158 0.00 0.00 0.00 4.09
2311 3783 2.899505 GCACTGGAGAGGGAGAGC 59.100 66.667 0.00 0.00 0.00 4.09
2312 3784 3.074999 GCGCACTGGAGAGGGAGAG 62.075 68.421 0.30 0.00 0.00 3.20
2313 3785 3.071206 GCGCACTGGAGAGGGAGA 61.071 66.667 0.30 0.00 0.00 3.71
2314 3786 4.154347 GGCGCACTGGAGAGGGAG 62.154 72.222 10.83 0.00 0.00 4.30
2337 3809 4.150454 AGGGAGAGGGAGGGCTCG 62.150 72.222 0.00 0.00 31.95 5.03
2338 3810 2.123033 GAGGGAGAGGGAGGGCTC 60.123 72.222 0.00 0.00 0.00 4.70
2339 3811 2.623431 AGAGGGAGAGGGAGGGCT 60.623 66.667 0.00 0.00 0.00 5.19
2340 3812 2.123033 GAGAGGGAGAGGGAGGGC 60.123 72.222 0.00 0.00 0.00 5.19
2341 3813 2.612251 GGAGAGGGAGAGGGAGGG 59.388 72.222 0.00 0.00 0.00 4.30
2342 3814 2.612251 GGGAGAGGGAGAGGGAGG 59.388 72.222 0.00 0.00 0.00 4.30
2343 3815 2.197324 CGGGAGAGGGAGAGGGAG 59.803 72.222 0.00 0.00 0.00 4.30
2344 3816 2.617538 ACGGGAGAGGGAGAGGGA 60.618 66.667 0.00 0.00 0.00 4.20
2345 3817 2.443016 CACGGGAGAGGGAGAGGG 60.443 72.222 0.00 0.00 0.00 4.30
2346 3818 3.151022 GCACGGGAGAGGGAGAGG 61.151 72.222 0.00 0.00 0.00 3.69
2347 3819 3.522731 CGCACGGGAGAGGGAGAG 61.523 72.222 0.00 0.00 35.49 3.20
2369 3841 3.827898 GTGAGGGAGGGCTCGACG 61.828 72.222 0.00 0.00 0.00 5.12
2370 3842 2.363147 AGTGAGGGAGGGCTCGAC 60.363 66.667 0.00 0.00 0.00 4.20
2371 3843 2.043852 GAGTGAGGGAGGGCTCGA 60.044 66.667 0.00 0.00 0.00 4.04
2372 3844 3.151022 GGAGTGAGGGAGGGCTCG 61.151 72.222 0.00 0.00 0.00 5.03
2373 3845 3.151022 CGGAGTGAGGGAGGGCTC 61.151 72.222 0.00 0.00 0.00 4.70
2374 3846 3.673597 TCGGAGTGAGGGAGGGCT 61.674 66.667 0.00 0.00 0.00 5.19
2375 3847 3.462678 GTCGGAGTGAGGGAGGGC 61.463 72.222 0.00 0.00 0.00 5.19
2376 3848 2.037367 TGTCGGAGTGAGGGAGGG 59.963 66.667 0.00 0.00 0.00 4.30
2377 3849 2.352032 GGTGTCGGAGTGAGGGAGG 61.352 68.421 0.00 0.00 0.00 4.30
2378 3850 2.352032 GGGTGTCGGAGTGAGGGAG 61.352 68.421 0.00 0.00 0.00 4.30
2379 3851 2.283676 GGGTGTCGGAGTGAGGGA 60.284 66.667 0.00 0.00 0.00 4.20
2380 3852 3.760035 CGGGTGTCGGAGTGAGGG 61.760 72.222 0.00 0.00 34.75 4.30
2381 3853 2.052690 ATCGGGTGTCGGAGTGAGG 61.053 63.158 0.00 0.00 39.77 3.86
2382 3854 1.139734 CATCGGGTGTCGGAGTGAG 59.860 63.158 0.00 0.00 39.77 3.51
2383 3855 2.348104 CCATCGGGTGTCGGAGTGA 61.348 63.158 0.00 0.00 39.77 3.41
2384 3856 2.184322 CCATCGGGTGTCGGAGTG 59.816 66.667 0.00 0.00 39.77 3.51
2385 3857 3.771160 GCCATCGGGTGTCGGAGT 61.771 66.667 0.00 0.00 39.77 3.85
2386 3858 4.530857 GGCCATCGGGTGTCGGAG 62.531 72.222 0.00 0.00 39.77 4.63
2395 3867 4.160635 GAAACGTGCGGCCATCGG 62.161 66.667 2.24 0.00 39.69 4.18
2396 3868 4.160635 GGAAACGTGCGGCCATCG 62.161 66.667 2.24 6.61 42.76 3.84
2397 3869 3.810896 GGGAAACGTGCGGCCATC 61.811 66.667 2.24 0.00 0.00 3.51
2456 3928 4.169271 ACGACTCCTGTTCGTGGA 57.831 55.556 0.00 0.00 38.75 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.