Multiple sequence alignment - TraesCS2B01G434500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G434500 chr2B 100.000 2402 0 0 1 2402 624536578 624534177 0.000000e+00 4436.0
1 TraesCS2B01G434500 chr2B 87.454 271 32 2 2133 2402 206178160 206177891 6.450000e-81 311.0
2 TraesCS2B01G434500 chr2D 89.979 1896 119 23 3 1864 527387031 527385173 0.000000e+00 2383.0
3 TraesCS2B01G434500 chr2D 86.131 274 34 3 2130 2402 307804173 307804443 2.340000e-75 292.0
4 TraesCS2B01G434500 chr2A 91.520 1592 77 15 258 1829 672343903 672342350 0.000000e+00 2139.0
5 TraesCS2B01G434500 chr2A 88.559 236 10 3 3 227 672344131 672343902 1.090000e-68 270.0
6 TraesCS2B01G434500 chr2A 87.395 119 8 2 1894 2005 672342121 672342003 1.940000e-26 130.0
7 TraesCS2B01G434500 chr5D 87.805 287 33 2 2116 2401 343518737 343519022 3.830000e-88 335.0
8 TraesCS2B01G434500 chr6B 85.666 293 37 5 2112 2402 287994324 287994035 1.080000e-78 303.0
9 TraesCS2B01G434500 chr4A 85.417 288 38 4 2115 2401 314187565 314187849 1.810000e-76 296.0
10 TraesCS2B01G434500 chr4D 84.694 294 40 3 2113 2402 287474423 287474715 3.020000e-74 289.0
11 TraesCS2B01G434500 chr4D 84.775 289 36 6 2113 2396 327831465 327831750 1.410000e-72 283.0
12 TraesCS2B01G434500 chr3B 85.036 274 37 3 2130 2402 485414911 485415181 2.350000e-70 276.0
13 TraesCS2B01G434500 chr5B 83.562 292 42 5 2113 2402 187908834 187909121 3.940000e-68 268.0
14 TraesCS2B01G434500 chr7B 88.889 54 6 0 1952 2005 612890273 612890326 1.540000e-07 67.6
15 TraesCS2B01G434500 chr3A 87.500 56 5 2 1952 2007 749480791 749480738 1.990000e-06 63.9
16 TraesCS2B01G434500 chr1D 100.000 28 0 0 1966 1993 208191264 208191291 4.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G434500 chr2B 624534177 624536578 2401 True 4436.000000 4436 100.000 1 2402 1 chr2B.!!$R2 2401
1 TraesCS2B01G434500 chr2D 527385173 527387031 1858 True 2383.000000 2383 89.979 3 1864 1 chr2D.!!$R1 1861
2 TraesCS2B01G434500 chr2A 672342003 672344131 2128 True 846.333333 2139 89.158 3 2005 3 chr2A.!!$R1 2002

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
915 967 0.179181 CATGTCGGTGAGCATTGTGC 60.179 55.0 0.0 0.0 45.46 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2142 2384 0.042431 ATGGAGAGGGAGCAGACACT 59.958 55.0 0.0 0.0 0.0 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
99 107 6.350110 GGCTTGCTTACAGAATAATTGGTCAA 60.350 38.462 0.00 0.00 0.00 3.18
114 122 3.230134 TGGTCAAAATCCCTGGTTTCTG 58.770 45.455 0.00 0.00 0.00 3.02
139 147 1.676967 CAAGCCTCTGGGAGTTGCC 60.677 63.158 0.00 0.00 33.58 4.52
176 184 1.295020 TCAATCAACCTCCCGGGAAT 58.705 50.000 26.68 13.40 38.76 3.01
182 190 2.847449 TCAACCTCCCGGGAATGAAATA 59.153 45.455 26.68 3.99 38.76 1.40
221 233 7.517259 CGGTTAAATATCGGTTTTAGCAGGTAC 60.517 40.741 0.00 0.00 0.00 3.34
227 239 2.740447 CGGTTTTAGCAGGTACTTCCAC 59.260 50.000 0.00 0.00 34.60 4.02
232 244 5.916661 TTTAGCAGGTACTTCCACTCTAG 57.083 43.478 0.00 0.00 34.60 2.43
236 248 4.021016 AGCAGGTACTTCCACTCTAGTTTG 60.021 45.833 0.00 0.00 34.60 2.93
244 256 2.037251 TCCACTCTAGTTTGACCACTGC 59.963 50.000 0.00 0.00 0.00 4.40
247 259 2.224305 ACTCTAGTTTGACCACTGCACC 60.224 50.000 0.00 0.00 0.00 5.01
307 342 7.917505 GTGCTCCCACTAAAATTGAAATGATAG 59.082 37.037 0.00 0.00 38.93 2.08
588 630 1.203075 TCCACGGCCTGGGTTAAAATT 60.203 47.619 17.89 0.00 41.06 1.82
639 681 2.286833 ACACGAACAAAATCGACCTGTG 59.713 45.455 3.47 0.00 45.48 3.66
647 689 5.115480 ACAAAATCGACCTGTGCAAAAATT 58.885 33.333 0.00 0.00 0.00 1.82
746 788 2.123982 GAGCCATGGAAGCTGGGG 60.124 66.667 18.40 0.00 41.75 4.96
747 789 2.614969 AGCCATGGAAGCTGGGGA 60.615 61.111 18.40 0.00 39.69 4.81
748 790 2.123982 GCCATGGAAGCTGGGGAG 60.124 66.667 18.40 0.00 34.16 4.30
749 791 2.599597 CCATGGAAGCTGGGGAGG 59.400 66.667 5.56 0.00 0.00 4.30
767 809 2.824041 CGGTTGAGGCGGATTGGG 60.824 66.667 0.00 0.00 0.00 4.12
779 828 1.692411 GGATTGGGGAATGGCAGTAC 58.308 55.000 0.00 0.00 0.00 2.73
812 863 2.110899 ACTGAGAGGTGGGAGAGAAGAA 59.889 50.000 0.00 0.00 0.00 2.52
827 878 2.169978 AGAAGAACCTACCCCGTTATGC 59.830 50.000 0.00 0.00 0.00 3.14
831 882 0.325860 ACCTACCCCGTTATGCTGGA 60.326 55.000 0.00 0.00 0.00 3.86
915 967 0.179181 CATGTCGGTGAGCATTGTGC 60.179 55.000 0.00 0.00 45.46 4.57
933 985 1.262950 TGCGTTTCAGTGTGTGCATAC 59.737 47.619 6.65 6.65 0.00 2.39
1016 1068 1.890979 CGATGGATGAGCTGGGTGC 60.891 63.158 0.00 0.00 43.29 5.01
1068 1120 3.939939 TGGCTTGGAGCGAGTGCA 61.940 61.111 0.00 0.00 43.62 4.57
1071 1123 3.485431 CTTGGAGCGAGTGCAGCG 61.485 66.667 4.63 4.63 46.23 5.18
1243 1295 2.951475 AAGTCGCCGGAGCCAAAACA 62.951 55.000 5.05 0.00 34.57 2.83
1277 1329 1.334239 CGACGGATTCTCGATCTGGAC 60.334 57.143 0.00 0.00 44.11 4.02
1303 1357 0.441145 AATTTTACACCGCGCGTCTC 59.559 50.000 29.95 0.00 0.00 3.36
1312 1367 2.472049 GCGCGTCTCTGTTTCTGC 59.528 61.111 8.43 0.00 0.00 4.26
1431 1486 4.889409 TGCCATGGATTTGATCTAGGAAAC 59.111 41.667 18.40 0.00 0.00 2.78
1434 1489 6.205658 GCCATGGATTTGATCTAGGAAACTAC 59.794 42.308 18.40 0.00 43.67 2.73
1435 1490 7.512992 CCATGGATTTGATCTAGGAAACTACT 58.487 38.462 5.56 0.00 43.67 2.57
1436 1491 7.443575 CCATGGATTTGATCTAGGAAACTACTG 59.556 40.741 5.56 0.00 43.67 2.74
1437 1492 7.496346 TGGATTTGATCTAGGAAACTACTGT 57.504 36.000 0.00 0.00 43.67 3.55
1438 1493 8.603898 TGGATTTGATCTAGGAAACTACTGTA 57.396 34.615 0.00 0.00 43.67 2.74
1439 1494 8.475639 TGGATTTGATCTAGGAAACTACTGTAC 58.524 37.037 0.00 0.00 43.67 2.90
1440 1495 8.697292 GGATTTGATCTAGGAAACTACTGTACT 58.303 37.037 0.00 0.00 43.67 2.73
1449 1504 9.889128 CTAGGAAACTACTGTACTTACTAGAGT 57.111 37.037 13.99 0.00 43.67 3.24
1529 1587 5.973565 GCAAAGCAATAATCACATCTGTACC 59.026 40.000 0.00 0.00 0.00 3.34
1534 1592 5.983720 GCAATAATCACATCTGTACCGTACT 59.016 40.000 10.03 0.00 0.00 2.73
1535 1593 7.013942 AGCAATAATCACATCTGTACCGTACTA 59.986 37.037 10.03 0.00 0.00 1.82
1536 1594 7.813148 GCAATAATCACATCTGTACCGTACTAT 59.187 37.037 10.03 1.52 0.00 2.12
1537 1595 9.692749 CAATAATCACATCTGTACCGTACTATT 57.307 33.333 10.03 0.56 0.00 1.73
1538 1596 9.692749 AATAATCACATCTGTACCGTACTATTG 57.307 33.333 10.03 6.93 0.00 1.90
1539 1597 6.710597 ATCACATCTGTACCGTACTATTGT 57.289 37.500 10.03 7.47 0.00 2.71
1589 1659 1.066152 GCTCGAATTTTGATCCTGCCC 59.934 52.381 0.00 0.00 0.00 5.36
1591 1661 2.357009 CTCGAATTTTGATCCTGCCCTG 59.643 50.000 0.00 0.00 0.00 4.45
1596 1666 0.038166 TTTGATCCTGCCCTGTGGAC 59.962 55.000 0.00 0.00 34.90 4.02
1597 1667 2.184020 TTGATCCTGCCCTGTGGACG 62.184 60.000 0.00 0.00 34.90 4.79
1624 1694 3.491619 CCATTGTACTCGTCTCCCAGATG 60.492 52.174 0.00 0.00 32.57 2.90
1688 1759 2.028839 TCTAACGAATGTCAGCCGGAAA 60.029 45.455 5.05 0.00 0.00 3.13
1702 1773 0.537371 CGGAAAGGGGTTGACAAGCT 60.537 55.000 16.41 0.00 0.00 3.74
1744 1815 1.303091 TTCGCGAGATCAGACGGTGA 61.303 55.000 9.59 0.00 41.60 4.02
1750 1821 2.854777 CGAGATCAGACGGTGACAATTC 59.145 50.000 0.00 0.00 38.28 2.17
1785 1856 7.698163 ATACCTTCTTGTCATTTCCTCCTAT 57.302 36.000 0.00 0.00 0.00 2.57
1786 1857 6.394345 ACCTTCTTGTCATTTCCTCCTATT 57.606 37.500 0.00 0.00 0.00 1.73
1829 1900 3.697166 AGCATTCCCTCACGGTTAAAAT 58.303 40.909 0.00 0.00 0.00 1.82
1842 1913 5.059221 CACGGTTAAAATTGTCAGCGAAATC 59.941 40.000 8.32 0.00 34.34 2.17
1846 1917 6.143278 GGTTAAAATTGTCAGCGAAATCGTTT 59.857 34.615 4.59 0.00 42.22 3.60
1861 1932 3.722908 TCGTTTGAAATATCACCCCCA 57.277 42.857 0.00 0.00 34.61 4.96
1864 1935 2.764010 GTTTGAAATATCACCCCCACCC 59.236 50.000 0.00 0.00 34.61 4.61
1865 1936 0.930726 TGAAATATCACCCCCACCCC 59.069 55.000 0.00 0.00 0.00 4.95
1866 1937 0.187606 GAAATATCACCCCCACCCCC 59.812 60.000 0.00 0.00 0.00 5.40
1867 1938 0.254589 AAATATCACCCCCACCCCCT 60.255 55.000 0.00 0.00 0.00 4.79
1868 1939 0.701310 AATATCACCCCCACCCCCTC 60.701 60.000 0.00 0.00 0.00 4.30
1869 1940 2.654599 ATATCACCCCCACCCCCTCC 62.655 65.000 0.00 0.00 0.00 4.30
1875 1946 4.837421 CCCACCCCCTCCCCCTAC 62.837 77.778 0.00 0.00 0.00 3.18
1876 1947 3.707189 CCACCCCCTCCCCCTACT 61.707 72.222 0.00 0.00 0.00 2.57
1877 1948 2.338377 CCACCCCCTCCCCCTACTA 61.338 68.421 0.00 0.00 0.00 1.82
1878 1949 1.236282 CACCCCCTCCCCCTACTAG 59.764 68.421 0.00 0.00 0.00 2.57
1879 1950 1.090077 ACCCCCTCCCCCTACTAGA 59.910 63.158 0.00 0.00 0.00 2.43
1880 1951 1.005566 ACCCCCTCCCCCTACTAGAG 61.006 65.000 0.00 0.00 0.00 2.43
1881 1952 0.705166 CCCCCTCCCCCTACTAGAGA 60.705 65.000 0.00 0.00 0.00 3.10
1882 1953 1.242444 CCCCTCCCCCTACTAGAGAA 58.758 60.000 0.00 0.00 0.00 2.87
1883 1954 1.796415 CCCCTCCCCCTACTAGAGAAT 59.204 57.143 0.00 0.00 0.00 2.40
1884 1955 2.493687 CCCCTCCCCCTACTAGAGAATG 60.494 59.091 0.00 0.00 0.00 2.67
1885 1956 2.180308 CCCTCCCCCTACTAGAGAATGT 59.820 54.545 0.00 0.00 0.00 2.71
1886 1957 3.375430 CCCTCCCCCTACTAGAGAATGTT 60.375 52.174 0.00 0.00 0.00 2.71
1887 1958 3.898741 CCTCCCCCTACTAGAGAATGTTC 59.101 52.174 0.00 0.00 0.00 3.18
1888 1959 3.563223 TCCCCCTACTAGAGAATGTTCG 58.437 50.000 0.00 0.00 0.00 3.95
1889 1960 3.053095 TCCCCCTACTAGAGAATGTTCGT 60.053 47.826 0.00 0.00 0.00 3.85
1890 1961 3.318557 CCCCCTACTAGAGAATGTTCGTC 59.681 52.174 0.00 0.00 0.00 4.20
1891 1962 3.003482 CCCCTACTAGAGAATGTTCGTCG 59.997 52.174 0.00 0.00 0.00 5.12
1892 1963 3.003482 CCCTACTAGAGAATGTTCGTCGG 59.997 52.174 0.00 0.00 0.00 4.79
1934 2169 9.807921 ATTTTAGTGAAATCCTTTAACAGAGGA 57.192 29.630 0.00 0.00 46.73 3.71
1936 2171 9.635404 TTTAGTGAAATCCTTTAACAGAGGAAA 57.365 29.630 0.00 0.00 45.87 3.13
1937 2172 9.807921 TTAGTGAAATCCTTTAACAGAGGAAAT 57.192 29.630 0.00 0.00 45.87 2.17
1961 2200 9.744468 AATGGATGTTTAAGAAAAACACAGTAC 57.256 29.630 5.52 0.00 42.18 2.73
1971 2210 8.911247 AAGAAAAACACAGTACAATTGAAGTC 57.089 30.769 13.59 0.00 0.00 3.01
1999 2241 6.434340 TCATATACACGAGCATACATTCTCCT 59.566 38.462 0.00 0.00 0.00 3.69
2012 2254 5.682234 ACATTCTCCTGTATGTGTGATCA 57.318 39.130 0.00 0.00 33.82 2.92
2013 2255 6.244552 ACATTCTCCTGTATGTGTGATCAT 57.755 37.500 0.00 0.00 33.82 2.45
2014 2256 7.365497 ACATTCTCCTGTATGTGTGATCATA 57.635 36.000 0.00 0.00 33.82 2.15
2015 2257 7.971201 ACATTCTCCTGTATGTGTGATCATAT 58.029 34.615 0.00 0.00 33.82 1.78
2016 2258 7.876582 ACATTCTCCTGTATGTGTGATCATATG 59.123 37.037 0.00 0.00 33.82 1.78
2017 2259 7.601705 TTCTCCTGTATGTGTGATCATATGA 57.398 36.000 8.10 8.10 33.68 2.15
2018 2260 7.601705 TCTCCTGTATGTGTGATCATATGAA 57.398 36.000 9.99 0.00 33.68 2.57
2019 2261 7.664758 TCTCCTGTATGTGTGATCATATGAAG 58.335 38.462 9.99 0.00 33.68 3.02
2020 2262 6.226052 TCCTGTATGTGTGATCATATGAAGC 58.774 40.000 9.99 5.78 33.68 3.86
2021 2263 5.993441 CCTGTATGTGTGATCATATGAAGCA 59.007 40.000 9.99 8.43 33.68 3.91
2022 2264 6.484308 CCTGTATGTGTGATCATATGAAGCAA 59.516 38.462 9.99 0.00 33.68 3.91
2023 2265 7.174426 CCTGTATGTGTGATCATATGAAGCAAT 59.826 37.037 9.99 5.01 33.68 3.56
2024 2266 8.091385 TGTATGTGTGATCATATGAAGCAATC 57.909 34.615 9.99 2.88 33.68 2.67
2025 2267 7.935210 TGTATGTGTGATCATATGAAGCAATCT 59.065 33.333 9.99 0.00 33.68 2.40
2026 2268 9.428097 GTATGTGTGATCATATGAAGCAATCTA 57.572 33.333 9.99 0.50 33.68 1.98
2027 2269 7.719778 TGTGTGATCATATGAAGCAATCTAC 57.280 36.000 9.99 6.83 0.00 2.59
2028 2270 7.503549 TGTGTGATCATATGAAGCAATCTACT 58.496 34.615 9.99 0.00 0.00 2.57
2029 2271 8.641541 TGTGTGATCATATGAAGCAATCTACTA 58.358 33.333 9.99 0.00 0.00 1.82
2030 2272 9.138062 GTGTGATCATATGAAGCAATCTACTAG 57.862 37.037 9.99 0.00 0.00 2.57
2031 2273 9.082313 TGTGATCATATGAAGCAATCTACTAGA 57.918 33.333 9.99 0.00 0.00 2.43
2036 2278 8.747471 TCATATGAAGCAATCTACTAGATCTGG 58.253 37.037 5.18 4.69 32.89 3.86
2037 2279 5.207110 TGAAGCAATCTACTAGATCTGGC 57.793 43.478 5.18 4.60 32.89 4.85
2038 2280 4.898265 TGAAGCAATCTACTAGATCTGGCT 59.102 41.667 5.18 11.36 37.80 4.75
2039 2281 4.870123 AGCAATCTACTAGATCTGGCTG 57.130 45.455 5.18 0.00 36.12 4.85
2040 2282 4.478203 AGCAATCTACTAGATCTGGCTGA 58.522 43.478 5.18 4.81 36.12 4.26
2041 2283 4.280677 AGCAATCTACTAGATCTGGCTGAC 59.719 45.833 5.18 0.00 36.12 3.51
2042 2284 4.038522 GCAATCTACTAGATCTGGCTGACA 59.961 45.833 5.18 0.00 32.89 3.58
2043 2285 5.279406 GCAATCTACTAGATCTGGCTGACAT 60.279 44.000 5.18 0.00 32.89 3.06
2044 2286 6.740960 GCAATCTACTAGATCTGGCTGACATT 60.741 42.308 5.18 0.00 32.89 2.71
2045 2287 6.588719 ATCTACTAGATCTGGCTGACATTC 57.411 41.667 5.18 0.00 25.75 2.67
2046 2288 4.830046 TCTACTAGATCTGGCTGACATTCC 59.170 45.833 5.18 0.00 0.00 3.01
2047 2289 3.378512 ACTAGATCTGGCTGACATTCCA 58.621 45.455 5.18 0.00 0.00 3.53
2048 2290 3.972638 ACTAGATCTGGCTGACATTCCAT 59.027 43.478 5.18 0.00 0.00 3.41
2049 2291 3.210232 AGATCTGGCTGACATTCCATG 57.790 47.619 0.00 0.00 0.00 3.66
2051 2293 2.118313 TCTGGCTGACATTCCATGTG 57.882 50.000 0.00 0.00 45.03 3.21
2052 2294 1.352017 TCTGGCTGACATTCCATGTGT 59.648 47.619 0.00 0.00 45.03 3.72
2053 2295 1.471287 CTGGCTGACATTCCATGTGTG 59.529 52.381 0.00 0.00 45.03 3.82
2054 2296 0.171903 GGCTGACATTCCATGTGTGC 59.828 55.000 0.00 0.00 45.03 4.57
2055 2297 1.171308 GCTGACATTCCATGTGTGCT 58.829 50.000 0.00 0.00 45.03 4.40
2056 2298 1.542915 GCTGACATTCCATGTGTGCTT 59.457 47.619 0.00 0.00 45.03 3.91
2057 2299 2.415090 GCTGACATTCCATGTGTGCTTC 60.415 50.000 0.00 0.00 45.03 3.86
2058 2300 1.805943 TGACATTCCATGTGTGCTTCG 59.194 47.619 0.00 0.00 45.03 3.79
2059 2301 0.523072 ACATTCCATGTGTGCTTCGC 59.477 50.000 0.00 0.00 43.01 4.70
2060 2302 0.521867 CATTCCATGTGTGCTTCGCG 60.522 55.000 0.00 0.00 0.00 5.87
2061 2303 2.257286 ATTCCATGTGTGCTTCGCGC 62.257 55.000 0.00 0.00 39.75 6.86
2077 2319 4.221422 GCATGCTCGCTACCGGGA 62.221 66.667 11.37 0.00 36.99 5.14
2078 2320 2.737180 CATGCTCGCTACCGGGAT 59.263 61.111 6.32 0.00 36.99 3.85
2079 2321 1.665916 CATGCTCGCTACCGGGATG 60.666 63.158 6.32 0.00 36.99 3.51
2080 2322 2.134287 ATGCTCGCTACCGGGATGT 61.134 57.895 6.32 0.00 36.99 3.06
2081 2323 2.027751 GCTCGCTACCGGGATGTC 59.972 66.667 6.32 0.00 36.99 3.06
2082 2324 2.331805 CTCGCTACCGGGATGTCG 59.668 66.667 6.32 0.94 36.99 4.35
2083 2325 3.825833 CTCGCTACCGGGATGTCGC 62.826 68.421 6.32 0.00 36.99 5.19
2084 2326 4.944372 CGCTACCGGGATGTCGCC 62.944 72.222 6.32 0.00 0.00 5.54
2085 2327 4.944372 GCTACCGGGATGTCGCCG 62.944 72.222 6.32 0.00 0.00 6.46
2086 2328 3.524606 CTACCGGGATGTCGCCGT 61.525 66.667 6.32 3.65 0.00 5.68
2087 2329 3.480225 CTACCGGGATGTCGCCGTC 62.480 68.421 6.32 0.00 0.00 4.79
2111 2353 4.760047 GGTGTCGCGACCTGCCAT 62.760 66.667 34.34 0.00 42.08 4.40
2112 2354 2.183300 GTGTCGCGACCTGCCATA 59.817 61.111 34.34 12.98 42.08 2.74
2113 2355 1.878522 GTGTCGCGACCTGCCATAG 60.879 63.158 34.34 0.00 42.08 2.23
2114 2356 2.348104 TGTCGCGACCTGCCATAGT 61.348 57.895 34.34 0.00 42.08 2.12
2115 2357 1.878522 GTCGCGACCTGCCATAGTG 60.879 63.158 28.61 0.00 42.08 2.74
2116 2358 3.264897 CGCGACCTGCCATAGTGC 61.265 66.667 0.00 0.00 42.08 4.40
2117 2359 2.897350 GCGACCTGCCATAGTGCC 60.897 66.667 0.00 0.00 37.76 5.01
2118 2360 2.903357 CGACCTGCCATAGTGCCT 59.097 61.111 0.00 0.00 0.00 4.75
2119 2361 1.522355 CGACCTGCCATAGTGCCTG 60.522 63.158 0.00 0.00 0.00 4.85
2120 2362 1.907739 GACCTGCCATAGTGCCTGA 59.092 57.895 0.00 0.00 0.00 3.86
2121 2363 0.471617 GACCTGCCATAGTGCCTGAT 59.528 55.000 0.00 0.00 0.00 2.90
2122 2364 1.694150 GACCTGCCATAGTGCCTGATA 59.306 52.381 0.00 0.00 0.00 2.15
2123 2365 2.104792 GACCTGCCATAGTGCCTGATAA 59.895 50.000 0.00 0.00 0.00 1.75
2124 2366 2.713167 ACCTGCCATAGTGCCTGATAAT 59.287 45.455 0.00 0.00 0.00 1.28
2125 2367 3.079578 CCTGCCATAGTGCCTGATAATG 58.920 50.000 0.00 0.00 0.00 1.90
2126 2368 3.497405 CCTGCCATAGTGCCTGATAATGT 60.497 47.826 0.00 0.00 0.00 2.71
2127 2369 4.139786 CTGCCATAGTGCCTGATAATGTT 58.860 43.478 0.00 0.00 0.00 2.71
2128 2370 4.535781 TGCCATAGTGCCTGATAATGTTT 58.464 39.130 0.00 0.00 0.00 2.83
2129 2371 4.580167 TGCCATAGTGCCTGATAATGTTTC 59.420 41.667 0.00 0.00 0.00 2.78
2130 2372 4.580167 GCCATAGTGCCTGATAATGTTTCA 59.420 41.667 0.00 0.00 0.00 2.69
2131 2373 5.278169 GCCATAGTGCCTGATAATGTTTCAG 60.278 44.000 0.00 0.00 40.25 3.02
2132 2374 5.824624 CCATAGTGCCTGATAATGTTTCAGT 59.175 40.000 0.00 0.00 39.16 3.41
2133 2375 6.238566 CCATAGTGCCTGATAATGTTTCAGTG 60.239 42.308 0.00 0.00 39.16 3.66
2134 2376 3.441572 AGTGCCTGATAATGTTTCAGTGC 59.558 43.478 0.00 0.00 39.16 4.40
2135 2377 2.754552 TGCCTGATAATGTTTCAGTGCC 59.245 45.455 9.87 0.00 39.16 5.01
2136 2378 3.019564 GCCTGATAATGTTTCAGTGCCT 58.980 45.455 0.00 0.00 39.16 4.75
2137 2379 3.181493 GCCTGATAATGTTTCAGTGCCTG 60.181 47.826 0.00 0.00 39.16 4.85
2138 2380 4.264253 CCTGATAATGTTTCAGTGCCTGA 58.736 43.478 1.25 1.25 39.16 3.86
2139 2381 4.885907 CCTGATAATGTTTCAGTGCCTGAT 59.114 41.667 5.83 0.00 40.39 2.90
2140 2382 6.057533 CCTGATAATGTTTCAGTGCCTGATA 58.942 40.000 5.83 0.00 40.39 2.15
2141 2383 6.543465 CCTGATAATGTTTCAGTGCCTGATAA 59.457 38.462 5.83 2.28 40.39 1.75
2142 2384 7.067372 CCTGATAATGTTTCAGTGCCTGATAAA 59.933 37.037 5.83 0.00 40.39 1.40
2143 2385 7.988737 TGATAATGTTTCAGTGCCTGATAAAG 58.011 34.615 5.83 0.00 40.39 1.85
2144 2386 7.611467 TGATAATGTTTCAGTGCCTGATAAAGT 59.389 33.333 5.83 0.04 40.39 2.66
2145 2387 5.633830 ATGTTTCAGTGCCTGATAAAGTG 57.366 39.130 5.83 0.00 40.39 3.16
2146 2388 4.460263 TGTTTCAGTGCCTGATAAAGTGT 58.540 39.130 5.83 0.00 40.39 3.55
2147 2389 4.515191 TGTTTCAGTGCCTGATAAAGTGTC 59.485 41.667 5.83 0.00 40.39 3.67
2148 2390 4.623932 TTCAGTGCCTGATAAAGTGTCT 57.376 40.909 5.83 0.00 40.39 3.41
2149 2391 3.930336 TCAGTGCCTGATAAAGTGTCTG 58.070 45.455 1.25 0.00 35.39 3.51
2150 2392 2.417933 CAGTGCCTGATAAAGTGTCTGC 59.582 50.000 0.00 0.00 32.44 4.26
2151 2393 2.304180 AGTGCCTGATAAAGTGTCTGCT 59.696 45.455 0.00 0.00 0.00 4.24
2152 2394 2.675348 GTGCCTGATAAAGTGTCTGCTC 59.325 50.000 0.00 0.00 0.00 4.26
2153 2395 2.284190 GCCTGATAAAGTGTCTGCTCC 58.716 52.381 0.00 0.00 0.00 4.70
2154 2396 2.911484 CCTGATAAAGTGTCTGCTCCC 58.089 52.381 0.00 0.00 0.00 4.30
2155 2397 2.503356 CCTGATAAAGTGTCTGCTCCCT 59.497 50.000 0.00 0.00 0.00 4.20
2156 2398 3.431486 CCTGATAAAGTGTCTGCTCCCTC 60.431 52.174 0.00 0.00 0.00 4.30
2157 2399 3.445008 TGATAAAGTGTCTGCTCCCTCT 58.555 45.455 0.00 0.00 0.00 3.69
2158 2400 3.449018 TGATAAAGTGTCTGCTCCCTCTC 59.551 47.826 0.00 0.00 0.00 3.20
2159 2401 0.980423 AAAGTGTCTGCTCCCTCTCC 59.020 55.000 0.00 0.00 0.00 3.71
2160 2402 0.178921 AAGTGTCTGCTCCCTCTCCA 60.179 55.000 0.00 0.00 0.00 3.86
2161 2403 0.042431 AGTGTCTGCTCCCTCTCCAT 59.958 55.000 0.00 0.00 0.00 3.41
2162 2404 0.908198 GTGTCTGCTCCCTCTCCATT 59.092 55.000 0.00 0.00 0.00 3.16
2163 2405 0.907486 TGTCTGCTCCCTCTCCATTG 59.093 55.000 0.00 0.00 0.00 2.82
2164 2406 0.463474 GTCTGCTCCCTCTCCATTGC 60.463 60.000 0.00 0.00 0.00 3.56
2165 2407 1.523258 CTGCTCCCTCTCCATTGCG 60.523 63.158 0.00 0.00 0.00 4.85
2166 2408 2.249413 CTGCTCCCTCTCCATTGCGT 62.249 60.000 0.00 0.00 0.00 5.24
2167 2409 0.975556 TGCTCCCTCTCCATTGCGTA 60.976 55.000 0.00 0.00 0.00 4.42
2168 2410 0.394565 GCTCCCTCTCCATTGCGTAT 59.605 55.000 0.00 0.00 0.00 3.06
2169 2411 1.202698 GCTCCCTCTCCATTGCGTATT 60.203 52.381 0.00 0.00 0.00 1.89
2170 2412 2.746472 GCTCCCTCTCCATTGCGTATTT 60.746 50.000 0.00 0.00 0.00 1.40
2171 2413 3.134458 CTCCCTCTCCATTGCGTATTTC 58.866 50.000 0.00 0.00 0.00 2.17
2172 2414 2.158813 TCCCTCTCCATTGCGTATTTCC 60.159 50.000 0.00 0.00 0.00 3.13
2173 2415 2.222027 CCTCTCCATTGCGTATTTCCC 58.778 52.381 0.00 0.00 0.00 3.97
2174 2416 2.158755 CCTCTCCATTGCGTATTTCCCT 60.159 50.000 0.00 0.00 0.00 4.20
2175 2417 3.134458 CTCTCCATTGCGTATTTCCCTC 58.866 50.000 0.00 0.00 0.00 4.30
2176 2418 1.867233 CTCCATTGCGTATTTCCCTCG 59.133 52.381 0.00 0.00 0.00 4.63
2177 2419 1.483004 TCCATTGCGTATTTCCCTCGA 59.517 47.619 0.00 0.00 0.00 4.04
2178 2420 1.597663 CCATTGCGTATTTCCCTCGAC 59.402 52.381 0.00 0.00 0.00 4.20
2179 2421 2.276201 CATTGCGTATTTCCCTCGACA 58.724 47.619 0.00 0.00 0.00 4.35
2180 2422 2.684001 TTGCGTATTTCCCTCGACAT 57.316 45.000 0.00 0.00 0.00 3.06
2181 2423 3.804786 TTGCGTATTTCCCTCGACATA 57.195 42.857 0.00 0.00 0.00 2.29
2182 2424 3.364889 TGCGTATTTCCCTCGACATAG 57.635 47.619 0.00 0.00 0.00 2.23
2183 2425 2.059541 GCGTATTTCCCTCGACATAGC 58.940 52.381 0.00 0.00 0.00 2.97
2184 2426 2.316792 CGTATTTCCCTCGACATAGCG 58.683 52.381 0.00 0.00 0.00 4.26
2185 2427 2.031420 CGTATTTCCCTCGACATAGCGA 60.031 50.000 0.00 0.00 38.74 4.93
2196 2438 4.993905 TCGACATAGCGAGAAGAAATTCA 58.006 39.130 0.00 0.00 35.01 2.57
2197 2439 5.037385 TCGACATAGCGAGAAGAAATTCAG 58.963 41.667 0.00 0.00 35.01 3.02
2198 2440 5.037385 CGACATAGCGAGAAGAAATTCAGA 58.963 41.667 0.00 0.00 0.00 3.27
2199 2441 5.689514 CGACATAGCGAGAAGAAATTCAGAT 59.310 40.000 0.00 0.00 0.00 2.90
2200 2442 6.345644 CGACATAGCGAGAAGAAATTCAGATG 60.346 42.308 0.00 0.00 0.00 2.90
2201 2443 6.344500 ACATAGCGAGAAGAAATTCAGATGT 58.656 36.000 0.00 0.00 0.00 3.06
2202 2444 6.478344 ACATAGCGAGAAGAAATTCAGATGTC 59.522 38.462 0.00 0.00 0.00 3.06
2203 2445 3.862267 AGCGAGAAGAAATTCAGATGTCG 59.138 43.478 0.00 2.62 0.00 4.35
2204 2446 3.859961 GCGAGAAGAAATTCAGATGTCGA 59.140 43.478 13.81 0.00 0.00 4.20
2205 2447 4.505922 GCGAGAAGAAATTCAGATGTCGAT 59.494 41.667 13.81 0.00 0.00 3.59
2206 2448 5.332205 GCGAGAAGAAATTCAGATGTCGATC 60.332 44.000 13.81 0.00 0.00 3.69
2207 2449 5.174761 CGAGAAGAAATTCAGATGTCGATCC 59.825 44.000 7.01 0.00 0.00 3.36
2208 2450 6.232581 AGAAGAAATTCAGATGTCGATCCT 57.767 37.500 0.00 0.00 0.00 3.24
2209 2451 6.648192 AGAAGAAATTCAGATGTCGATCCTT 58.352 36.000 0.00 0.00 0.00 3.36
2210 2452 6.760770 AGAAGAAATTCAGATGTCGATCCTTC 59.239 38.462 0.00 0.00 0.00 3.46
2211 2453 6.232581 AGAAATTCAGATGTCGATCCTTCT 57.767 37.500 0.00 0.00 0.00 2.85
2212 2454 6.047870 AGAAATTCAGATGTCGATCCTTCTG 58.952 40.000 10.84 10.84 37.75 3.02
2213 2455 2.879002 TCAGATGTCGATCCTTCTGC 57.121 50.000 11.79 0.00 36.86 4.26
2214 2456 2.102578 TCAGATGTCGATCCTTCTGCA 58.897 47.619 11.79 0.00 36.86 4.41
2215 2457 2.100418 TCAGATGTCGATCCTTCTGCAG 59.900 50.000 7.63 7.63 36.86 4.41
2216 2458 1.202510 AGATGTCGATCCTTCTGCAGC 60.203 52.381 9.47 0.00 0.00 5.25
2217 2459 0.538584 ATGTCGATCCTTCTGCAGCA 59.461 50.000 9.47 0.00 0.00 4.41
2218 2460 0.321346 TGTCGATCCTTCTGCAGCAA 59.679 50.000 9.47 3.62 0.00 3.91
2219 2461 1.270785 TGTCGATCCTTCTGCAGCAAA 60.271 47.619 9.47 0.00 0.00 3.68
2220 2462 1.396301 GTCGATCCTTCTGCAGCAAAG 59.604 52.381 9.47 8.56 0.00 2.77
2221 2463 1.002430 TCGATCCTTCTGCAGCAAAGT 59.998 47.619 9.47 0.00 0.00 2.66
2222 2464 1.396301 CGATCCTTCTGCAGCAAAGTC 59.604 52.381 9.47 3.62 0.00 3.01
2223 2465 2.430465 GATCCTTCTGCAGCAAAGTCA 58.570 47.619 9.47 0.00 0.00 3.41
2224 2466 1.888215 TCCTTCTGCAGCAAAGTCAG 58.112 50.000 9.47 0.00 0.00 3.51
2225 2467 1.141657 TCCTTCTGCAGCAAAGTCAGT 59.858 47.619 9.47 0.00 0.00 3.41
2226 2468 1.952296 CCTTCTGCAGCAAAGTCAGTT 59.048 47.619 9.47 0.00 0.00 3.16
2227 2469 2.360165 CCTTCTGCAGCAAAGTCAGTTT 59.640 45.455 9.47 0.00 0.00 2.66
2228 2470 3.549625 CCTTCTGCAGCAAAGTCAGTTTC 60.550 47.826 9.47 0.00 0.00 2.78
2229 2471 2.923121 TCTGCAGCAAAGTCAGTTTCT 58.077 42.857 9.47 0.00 0.00 2.52
2230 2472 2.874701 TCTGCAGCAAAGTCAGTTTCTC 59.125 45.455 9.47 0.00 0.00 2.87
2231 2473 2.877168 CTGCAGCAAAGTCAGTTTCTCT 59.123 45.455 0.00 0.00 0.00 3.10
2232 2474 2.874701 TGCAGCAAAGTCAGTTTCTCTC 59.125 45.455 0.00 0.00 0.00 3.20
2233 2475 2.874701 GCAGCAAAGTCAGTTTCTCTCA 59.125 45.455 0.00 0.00 0.00 3.27
2234 2476 3.501445 GCAGCAAAGTCAGTTTCTCTCAT 59.499 43.478 0.00 0.00 0.00 2.90
2235 2477 4.378253 GCAGCAAAGTCAGTTTCTCTCATC 60.378 45.833 0.00 0.00 0.00 2.92
2236 2478 4.753610 CAGCAAAGTCAGTTTCTCTCATCA 59.246 41.667 0.00 0.00 0.00 3.07
2237 2479 5.411977 CAGCAAAGTCAGTTTCTCTCATCAT 59.588 40.000 0.00 0.00 0.00 2.45
2238 2480 6.002704 AGCAAAGTCAGTTTCTCTCATCATT 58.997 36.000 0.00 0.00 0.00 2.57
2239 2481 6.149142 AGCAAAGTCAGTTTCTCTCATCATTC 59.851 38.462 0.00 0.00 0.00 2.67
2240 2482 6.622462 GCAAAGTCAGTTTCTCTCATCATTCC 60.622 42.308 0.00 0.00 0.00 3.01
2241 2483 4.753233 AGTCAGTTTCTCTCATCATTCCG 58.247 43.478 0.00 0.00 0.00 4.30
2242 2484 4.464244 AGTCAGTTTCTCTCATCATTCCGA 59.536 41.667 0.00 0.00 0.00 4.55
2243 2485 4.564769 GTCAGTTTCTCTCATCATTCCGAC 59.435 45.833 0.00 0.00 0.00 4.79
2244 2486 4.464244 TCAGTTTCTCTCATCATTCCGACT 59.536 41.667 0.00 0.00 0.00 4.18
2245 2487 4.803088 CAGTTTCTCTCATCATTCCGACTC 59.197 45.833 0.00 0.00 0.00 3.36
2246 2488 4.709397 AGTTTCTCTCATCATTCCGACTCT 59.291 41.667 0.00 0.00 0.00 3.24
2247 2489 5.888724 AGTTTCTCTCATCATTCCGACTCTA 59.111 40.000 0.00 0.00 0.00 2.43
2248 2490 6.549364 AGTTTCTCTCATCATTCCGACTCTAT 59.451 38.462 0.00 0.00 0.00 1.98
2249 2491 6.567687 TTCTCTCATCATTCCGACTCTATC 57.432 41.667 0.00 0.00 0.00 2.08
2250 2492 5.625150 TCTCTCATCATTCCGACTCTATCA 58.375 41.667 0.00 0.00 0.00 2.15
2251 2493 6.244654 TCTCTCATCATTCCGACTCTATCAT 58.755 40.000 0.00 0.00 0.00 2.45
2252 2494 6.718912 TCTCTCATCATTCCGACTCTATCATT 59.281 38.462 0.00 0.00 0.00 2.57
2253 2495 7.232330 TCTCTCATCATTCCGACTCTATCATTT 59.768 37.037 0.00 0.00 0.00 2.32
2254 2496 7.730084 TCTCATCATTCCGACTCTATCATTTT 58.270 34.615 0.00 0.00 0.00 1.82
2255 2497 8.860088 TCTCATCATTCCGACTCTATCATTTTA 58.140 33.333 0.00 0.00 0.00 1.52
2256 2498 9.650539 CTCATCATTCCGACTCTATCATTTTAT 57.349 33.333 0.00 0.00 0.00 1.40
2257 2499 9.428097 TCATCATTCCGACTCTATCATTTTATG 57.572 33.333 0.00 0.00 0.00 1.90
2258 2500 9.428097 CATCATTCCGACTCTATCATTTTATGA 57.572 33.333 0.00 0.00 44.55 2.15
2275 2517 9.177304 CATTTTATGATGATGAAGTGATTTCCG 57.823 33.333 0.00 0.00 34.77 4.30
2276 2518 7.864108 TTTATGATGATGAAGTGATTTCCGT 57.136 32.000 0.00 0.00 34.77 4.69
2277 2519 7.864108 TTATGATGATGAAGTGATTTCCGTT 57.136 32.000 0.00 0.00 34.77 4.44
2278 2520 5.550232 TGATGATGAAGTGATTTCCGTTG 57.450 39.130 0.00 0.00 34.77 4.10
2279 2521 5.244755 TGATGATGAAGTGATTTCCGTTGA 58.755 37.500 0.00 0.00 34.77 3.18
2280 2522 5.704978 TGATGATGAAGTGATTTCCGTTGAA 59.295 36.000 0.00 0.00 34.77 2.69
2281 2523 5.611796 TGATGAAGTGATTTCCGTTGAAG 57.388 39.130 0.00 0.00 34.77 3.02
2282 2524 5.304778 TGATGAAGTGATTTCCGTTGAAGA 58.695 37.500 0.00 0.00 34.77 2.87
2283 2525 5.939883 TGATGAAGTGATTTCCGTTGAAGAT 59.060 36.000 0.00 0.00 34.77 2.40
2284 2526 5.611796 TGAAGTGATTTCCGTTGAAGATG 57.388 39.130 0.00 0.00 34.77 2.90
2285 2527 5.304778 TGAAGTGATTTCCGTTGAAGATGA 58.695 37.500 0.00 0.00 34.77 2.92
2286 2528 5.409520 TGAAGTGATTTCCGTTGAAGATGAG 59.590 40.000 0.00 0.00 34.77 2.90
2287 2529 3.686726 AGTGATTTCCGTTGAAGATGAGC 59.313 43.478 0.00 0.00 0.00 4.26
2288 2530 3.686726 GTGATTTCCGTTGAAGATGAGCT 59.313 43.478 0.00 0.00 0.00 4.09
2289 2531 3.935203 TGATTTCCGTTGAAGATGAGCTC 59.065 43.478 6.82 6.82 0.00 4.09
2290 2532 3.401033 TTTCCGTTGAAGATGAGCTCA 57.599 42.857 20.79 20.79 0.00 4.26
2291 2533 3.401033 TTCCGTTGAAGATGAGCTCAA 57.599 42.857 22.50 0.00 0.00 3.02
2292 2534 3.401033 TCCGTTGAAGATGAGCTCAAA 57.599 42.857 22.50 7.13 0.00 2.69
2293 2535 3.942829 TCCGTTGAAGATGAGCTCAAAT 58.057 40.909 22.50 9.51 0.00 2.32
2294 2536 5.084818 TCCGTTGAAGATGAGCTCAAATA 57.915 39.130 22.50 2.93 0.00 1.40
2295 2537 5.674525 TCCGTTGAAGATGAGCTCAAATAT 58.325 37.500 22.50 3.33 0.00 1.28
2296 2538 5.755375 TCCGTTGAAGATGAGCTCAAATATC 59.245 40.000 22.50 13.77 0.00 1.63
2297 2539 5.049818 CCGTTGAAGATGAGCTCAAATATCC 60.050 44.000 22.50 8.68 0.00 2.59
2298 2540 5.525012 CGTTGAAGATGAGCTCAAATATCCA 59.475 40.000 22.50 11.17 0.00 3.41
2299 2541 6.204301 CGTTGAAGATGAGCTCAAATATCCAT 59.796 38.462 22.50 5.62 0.00 3.41
2300 2542 7.386025 CGTTGAAGATGAGCTCAAATATCCATA 59.614 37.037 22.50 0.00 0.00 2.74
2301 2543 9.228949 GTTGAAGATGAGCTCAAATATCCATAT 57.771 33.333 22.50 0.00 0.00 1.78
2302 2544 9.445878 TTGAAGATGAGCTCAAATATCCATATC 57.554 33.333 22.50 9.49 0.00 1.63
2303 2545 8.045507 TGAAGATGAGCTCAAATATCCATATCC 58.954 37.037 22.50 0.00 0.00 2.59
2304 2546 7.752518 AGATGAGCTCAAATATCCATATCCT 57.247 36.000 22.50 0.00 0.00 3.24
2305 2547 8.160434 AGATGAGCTCAAATATCCATATCCTT 57.840 34.615 22.50 0.00 0.00 3.36
2306 2548 8.047911 AGATGAGCTCAAATATCCATATCCTTG 58.952 37.037 22.50 0.00 0.00 3.61
2307 2549 5.942236 TGAGCTCAAATATCCATATCCTTGC 59.058 40.000 15.67 0.00 0.00 4.01
2308 2550 4.940046 AGCTCAAATATCCATATCCTTGCG 59.060 41.667 0.00 0.00 0.00 4.85
2309 2551 4.937620 GCTCAAATATCCATATCCTTGCGA 59.062 41.667 0.00 0.00 0.00 5.10
2310 2552 5.064452 GCTCAAATATCCATATCCTTGCGAG 59.936 44.000 0.00 0.00 0.00 5.03
2311 2553 4.937620 TCAAATATCCATATCCTTGCGAGC 59.062 41.667 0.00 0.00 0.00 5.03
2312 2554 4.558226 AATATCCATATCCTTGCGAGCA 57.442 40.909 0.00 0.00 0.00 4.26
2313 2555 2.936919 ATCCATATCCTTGCGAGCAA 57.063 45.000 10.28 10.28 0.00 3.91
2314 2556 1.953559 TCCATATCCTTGCGAGCAAC 58.046 50.000 6.39 0.00 0.00 4.17
2315 2557 1.486310 TCCATATCCTTGCGAGCAACT 59.514 47.619 6.39 0.00 0.00 3.16
2316 2558 1.600957 CCATATCCTTGCGAGCAACTG 59.399 52.381 6.39 1.67 0.00 3.16
2317 2559 1.003116 CATATCCTTGCGAGCAACTGC 60.003 52.381 6.39 0.00 42.49 4.40
2318 2560 0.744414 TATCCTTGCGAGCAACTGCC 60.744 55.000 6.39 0.00 43.38 4.85
2319 2561 2.475371 ATCCTTGCGAGCAACTGCCT 62.475 55.000 6.39 0.00 43.38 4.75
2320 2562 2.263741 CCTTGCGAGCAACTGCCTT 61.264 57.895 6.39 0.00 43.38 4.35
2321 2563 1.656441 CTTGCGAGCAACTGCCTTT 59.344 52.632 6.39 0.00 43.38 3.11
2322 2564 0.874390 CTTGCGAGCAACTGCCTTTA 59.126 50.000 6.39 0.00 43.38 1.85
2323 2565 1.470098 CTTGCGAGCAACTGCCTTTAT 59.530 47.619 6.39 0.00 43.38 1.40
2324 2566 1.533625 TGCGAGCAACTGCCTTTATT 58.466 45.000 0.00 0.00 43.38 1.40
2325 2567 1.468520 TGCGAGCAACTGCCTTTATTC 59.531 47.619 0.00 0.00 43.38 1.75
2326 2568 1.740025 GCGAGCAACTGCCTTTATTCT 59.260 47.619 0.00 0.00 43.38 2.40
2327 2569 2.223135 GCGAGCAACTGCCTTTATTCTC 60.223 50.000 0.00 0.00 43.38 2.87
2328 2570 2.352960 CGAGCAACTGCCTTTATTCTCC 59.647 50.000 0.00 0.00 43.38 3.71
2329 2571 3.347216 GAGCAACTGCCTTTATTCTCCA 58.653 45.455 0.00 0.00 43.38 3.86
2330 2572 3.084786 AGCAACTGCCTTTATTCTCCAC 58.915 45.455 0.00 0.00 43.38 4.02
2331 2573 2.819608 GCAACTGCCTTTATTCTCCACA 59.180 45.455 0.00 0.00 34.31 4.17
2332 2574 3.119708 GCAACTGCCTTTATTCTCCACAG 60.120 47.826 0.00 0.00 34.31 3.66
2333 2575 3.356529 ACTGCCTTTATTCTCCACAGG 57.643 47.619 0.00 0.00 0.00 4.00
2335 2577 1.393603 GCCTTTATTCTCCACAGGCC 58.606 55.000 0.00 0.00 43.78 5.19
2336 2578 1.064389 GCCTTTATTCTCCACAGGCCT 60.064 52.381 0.00 0.00 43.78 5.19
2337 2579 2.621668 GCCTTTATTCTCCACAGGCCTT 60.622 50.000 0.00 0.00 43.78 4.35
2338 2580 3.019564 CCTTTATTCTCCACAGGCCTTG 58.980 50.000 0.00 5.12 0.00 3.61
2339 2581 2.806945 TTATTCTCCACAGGCCTTGG 57.193 50.000 21.53 21.53 35.18 3.61
2340 2582 0.255890 TATTCTCCACAGGCCTTGGC 59.744 55.000 22.32 2.49 33.71 4.52
2341 2583 2.826777 ATTCTCCACAGGCCTTGGCG 62.827 60.000 22.32 18.35 33.71 5.69
2342 2584 4.335647 CTCCACAGGCCTTGGCGT 62.336 66.667 22.32 8.17 33.71 5.68
2343 2585 4.329545 TCCACAGGCCTTGGCGTC 62.330 66.667 22.32 0.00 33.71 5.19
2344 2586 4.641645 CCACAGGCCTTGGCGTCA 62.642 66.667 17.56 0.00 0.00 4.35
2345 2587 2.594303 CACAGGCCTTGGCGTCAA 60.594 61.111 0.00 0.91 0.00 3.18
2346 2588 2.192861 CACAGGCCTTGGCGTCAAA 61.193 57.895 0.00 0.00 31.77 2.69
2347 2589 1.898574 ACAGGCCTTGGCGTCAAAG 60.899 57.895 0.00 0.00 31.77 2.77
2348 2590 2.282462 AGGCCTTGGCGTCAAAGG 60.282 61.111 3.10 8.82 31.77 3.11
2349 2591 3.373565 GGCCTTGGCGTCAAAGGG 61.374 66.667 16.52 11.09 31.77 3.95
2350 2592 4.056125 GCCTTGGCGTCAAAGGGC 62.056 66.667 16.11 16.11 37.16 5.19
2355 2597 2.034221 GGCGTCAAAGGGCCTCTT 59.966 61.111 6.46 0.93 45.93 2.85
2356 2598 1.603739 GGCGTCAAAGGGCCTCTTT 60.604 57.895 6.46 12.02 45.93 2.52
2357 2599 1.179174 GGCGTCAAAGGGCCTCTTTT 61.179 55.000 6.46 0.00 42.62 2.27
2358 2600 0.241213 GCGTCAAAGGGCCTCTTTTC 59.759 55.000 6.46 10.60 42.62 2.29
2359 2601 1.604604 CGTCAAAGGGCCTCTTTTCA 58.395 50.000 6.46 4.44 42.62 2.69
2360 2602 1.953686 CGTCAAAGGGCCTCTTTTCAA 59.046 47.619 6.46 3.79 42.62 2.69
2361 2603 2.558359 CGTCAAAGGGCCTCTTTTCAAT 59.442 45.455 6.46 0.00 42.62 2.57
2362 2604 3.366374 CGTCAAAGGGCCTCTTTTCAATC 60.366 47.826 6.46 5.47 42.62 2.67
2363 2605 2.819608 TCAAAGGGCCTCTTTTCAATCG 59.180 45.455 6.46 5.28 42.62 3.34
2364 2606 1.839424 AAGGGCCTCTTTTCAATCGG 58.161 50.000 6.46 0.00 29.99 4.18
2365 2607 0.991920 AGGGCCTCTTTTCAATCGGA 59.008 50.000 0.00 0.00 0.00 4.55
2366 2608 1.354368 AGGGCCTCTTTTCAATCGGAA 59.646 47.619 0.00 0.00 0.00 4.30
2367 2609 1.472878 GGGCCTCTTTTCAATCGGAAC 59.527 52.381 0.84 0.00 34.56 3.62
2368 2610 2.159382 GGCCTCTTTTCAATCGGAACA 58.841 47.619 0.00 0.00 34.56 3.18
2369 2611 2.095212 GGCCTCTTTTCAATCGGAACAC 60.095 50.000 0.00 0.00 34.56 3.32
2370 2612 2.814336 GCCTCTTTTCAATCGGAACACT 59.186 45.455 0.00 0.00 34.56 3.55
2371 2613 3.120165 GCCTCTTTTCAATCGGAACACTC 60.120 47.826 0.00 0.00 34.56 3.51
2372 2614 4.065088 CCTCTTTTCAATCGGAACACTCA 58.935 43.478 0.00 0.00 34.56 3.41
2373 2615 4.697352 CCTCTTTTCAATCGGAACACTCAT 59.303 41.667 0.00 0.00 34.56 2.90
2374 2616 5.163814 CCTCTTTTCAATCGGAACACTCATC 60.164 44.000 0.00 0.00 34.56 2.92
2375 2617 5.551233 TCTTTTCAATCGGAACACTCATCT 58.449 37.500 0.00 0.00 34.56 2.90
2376 2618 5.997746 TCTTTTCAATCGGAACACTCATCTT 59.002 36.000 0.00 0.00 34.56 2.40
2377 2619 5.611796 TTTCAATCGGAACACTCATCTTG 57.388 39.130 0.00 0.00 34.56 3.02
2378 2620 4.271696 TCAATCGGAACACTCATCTTGT 57.728 40.909 0.00 0.00 0.00 3.16
2379 2621 4.641396 TCAATCGGAACACTCATCTTGTT 58.359 39.130 0.00 0.00 39.94 2.83
2380 2622 5.063204 TCAATCGGAACACTCATCTTGTTT 58.937 37.500 0.00 0.00 37.31 2.83
2381 2623 5.530915 TCAATCGGAACACTCATCTTGTTTT 59.469 36.000 0.00 0.00 37.31 2.43
2382 2624 5.613358 ATCGGAACACTCATCTTGTTTTC 57.387 39.130 0.00 0.00 37.31 2.29
2383 2625 4.703897 TCGGAACACTCATCTTGTTTTCT 58.296 39.130 0.00 0.00 37.31 2.52
2384 2626 5.123227 TCGGAACACTCATCTTGTTTTCTT 58.877 37.500 0.00 0.00 37.31 2.52
2385 2627 5.588648 TCGGAACACTCATCTTGTTTTCTTT 59.411 36.000 0.00 0.00 37.31 2.52
2386 2628 6.094881 TCGGAACACTCATCTTGTTTTCTTTT 59.905 34.615 0.00 0.00 37.31 2.27
2387 2629 7.281324 TCGGAACACTCATCTTGTTTTCTTTTA 59.719 33.333 0.00 0.00 37.31 1.52
2388 2630 7.913297 CGGAACACTCATCTTGTTTTCTTTTAA 59.087 33.333 0.00 0.00 37.31 1.52
2389 2631 9.237846 GGAACACTCATCTTGTTTTCTTTTAAG 57.762 33.333 0.00 0.00 37.31 1.85
2392 2634 9.396022 ACACTCATCTTGTTTTCTTTTAAGAGA 57.604 29.630 0.00 0.00 36.22 3.10
2393 2635 9.875675 CACTCATCTTGTTTTCTTTTAAGAGAG 57.124 33.333 0.00 0.00 36.22 3.20
2394 2636 9.620259 ACTCATCTTGTTTTCTTTTAAGAGAGT 57.380 29.630 0.00 0.00 35.42 3.24
2396 2638 9.057089 TCATCTTGTTTTCTTTTAAGAGAGTCC 57.943 33.333 0.00 0.00 36.22 3.85
2397 2639 8.840321 CATCTTGTTTTCTTTTAAGAGAGTCCA 58.160 33.333 0.00 0.00 36.22 4.02
2398 2640 8.980481 TCTTGTTTTCTTTTAAGAGAGTCCAT 57.020 30.769 0.00 0.00 36.22 3.41
2401 2643 9.621629 TTGTTTTCTTTTAAGAGAGTCCATACA 57.378 29.630 0.00 0.00 36.22 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.254166 ACCAGACAGCAAAATGACATGAC 59.746 43.478 0.00 0.00 0.00 3.06
1 2 3.489355 ACCAGACAGCAAAATGACATGA 58.511 40.909 0.00 0.00 0.00 3.07
2 3 3.928727 ACCAGACAGCAAAATGACATG 57.071 42.857 0.00 0.00 0.00 3.21
4 5 3.146066 GGTACCAGACAGCAAAATGACA 58.854 45.455 7.15 0.00 0.00 3.58
5 6 3.189287 CAGGTACCAGACAGCAAAATGAC 59.811 47.826 15.94 0.00 0.00 3.06
69 77 9.236006 CCAATTATTCTGTAAGCAAGCCTATAT 57.764 33.333 0.00 0.00 0.00 0.86
99 107 3.826729 GCTTACACAGAAACCAGGGATTT 59.173 43.478 0.00 0.00 0.00 2.17
114 122 0.324943 TCCCAGAGGCTTGCTTACAC 59.675 55.000 0.00 0.00 0.00 2.90
139 147 9.398170 GTTGATTGATATGATATTTTTCCGGTG 57.602 33.333 0.00 0.00 0.00 4.94
182 190 9.777575 CCGATATTTAACCGAAGTTACAAAATT 57.222 29.630 0.00 0.00 38.19 1.82
221 233 4.310769 CAGTGGTCAAACTAGAGTGGAAG 58.689 47.826 0.00 0.00 0.00 3.46
227 239 2.224281 TGGTGCAGTGGTCAAACTAGAG 60.224 50.000 0.00 0.00 0.00 2.43
232 244 1.360192 GCTGGTGCAGTGGTCAAAC 59.640 57.895 0.00 0.00 39.41 2.93
244 256 6.073369 CGACGATAAATGAATTATGCTGGTG 58.927 40.000 0.00 0.00 34.30 4.17
247 259 5.082059 GGCGACGATAAATGAATTATGCTG 58.918 41.667 0.00 0.00 34.30 4.41
254 266 4.024048 GGTGAATGGCGACGATAAATGAAT 60.024 41.667 0.00 0.00 0.00 2.57
465 507 2.635338 GACGTGGTGAAAACCGGC 59.365 61.111 0.00 0.00 0.00 6.13
580 622 3.186909 GCTGCGATTGGGGAATTTTAAC 58.813 45.455 0.00 0.00 0.00 2.01
588 630 3.371097 GAGTCGCTGCGATTGGGGA 62.371 63.158 28.51 0.00 38.42 4.81
639 681 2.357637 TCCGATCCGATCCAATTTTTGC 59.642 45.455 2.69 0.00 0.00 3.68
647 689 0.313987 CGTTGATCCGATCCGATCCA 59.686 55.000 17.84 7.46 38.32 3.41
746 788 3.682292 AATCCGCCTCAACCGCCTC 62.682 63.158 0.00 0.00 0.00 4.70
747 789 3.717294 AATCCGCCTCAACCGCCT 61.717 61.111 0.00 0.00 0.00 5.52
748 790 3.508840 CAATCCGCCTCAACCGCC 61.509 66.667 0.00 0.00 0.00 6.13
749 791 3.508840 CCAATCCGCCTCAACCGC 61.509 66.667 0.00 0.00 0.00 5.68
759 801 0.182537 TACTGCCATTCCCCAATCCG 59.817 55.000 0.00 0.00 0.00 4.18
767 809 2.500098 TCACCAGTAGTACTGCCATTCC 59.500 50.000 22.67 0.00 44.63 3.01
779 828 3.130164 CACCTCTCAGTGATCACCAGTAG 59.870 52.174 22.21 14.11 40.34 2.57
812 863 0.325860 TCCAGCATAACGGGGTAGGT 60.326 55.000 0.00 0.00 33.79 3.08
827 878 1.230635 CGTTGCCAGTTCACCTCCAG 61.231 60.000 0.00 0.00 0.00 3.86
831 882 2.113139 CCCGTTGCCAGTTCACCT 59.887 61.111 0.00 0.00 0.00 4.00
915 967 3.878086 AAGTATGCACACACTGAAACG 57.122 42.857 0.00 0.00 0.00 3.60
933 985 0.595095 GCTCTGTGGGAGTTGCAAAG 59.405 55.000 0.00 0.00 43.62 2.77
967 1019 3.036084 CGCCGCCGCTAGGTTATG 61.036 66.667 0.00 0.00 40.50 1.90
1022 1074 2.044946 CCTTGCCCTTCTTCCCGG 60.045 66.667 0.00 0.00 0.00 5.73
1257 1309 0.945099 TCCAGATCGAGAATCCGTCG 59.055 55.000 0.00 0.00 38.84 5.12
1277 1329 2.344917 CGGTGTAAAATTTGCCGCG 58.655 52.632 0.00 0.00 35.90 6.46
1312 1367 1.129917 ATCTCCTCCACCTGCAGATG 58.870 55.000 17.39 8.67 0.00 2.90
1431 1486 6.598457 TCTTGCCACTCTAGTAAGTACAGTAG 59.402 42.308 0.00 0.00 0.00 2.57
1434 1489 5.416326 ACTCTTGCCACTCTAGTAAGTACAG 59.584 44.000 0.00 0.00 0.00 2.74
1435 1490 5.322754 ACTCTTGCCACTCTAGTAAGTACA 58.677 41.667 0.00 0.00 0.00 2.90
1436 1491 5.900865 ACTCTTGCCACTCTAGTAAGTAC 57.099 43.478 0.00 0.00 0.00 2.73
1437 1492 6.071503 GGAAACTCTTGCCACTCTAGTAAGTA 60.072 42.308 0.00 0.00 0.00 2.24
1438 1493 5.279556 GGAAACTCTTGCCACTCTAGTAAGT 60.280 44.000 0.00 0.00 0.00 2.24
1439 1494 5.172205 GGAAACTCTTGCCACTCTAGTAAG 58.828 45.833 0.00 0.00 0.00 2.34
1440 1495 4.591498 TGGAAACTCTTGCCACTCTAGTAA 59.409 41.667 0.00 0.00 0.00 2.24
1441 1496 4.157246 TGGAAACTCTTGCCACTCTAGTA 58.843 43.478 0.00 0.00 0.00 1.82
1442 1497 2.972713 TGGAAACTCTTGCCACTCTAGT 59.027 45.455 0.00 0.00 0.00 2.57
1449 1504 2.655090 TCACATGGAAACTCTTGCCA 57.345 45.000 0.00 0.00 35.91 4.92
1529 1587 6.680055 ACAACGTTACAGAACAATAGTACG 57.320 37.500 0.00 0.00 35.06 3.67
1534 1592 5.459768 TCGCTACAACGTTACAGAACAATA 58.540 37.500 0.00 0.00 35.06 1.90
1535 1593 4.300803 TCGCTACAACGTTACAGAACAAT 58.699 39.130 0.00 0.00 35.06 2.71
1536 1594 3.704512 TCGCTACAACGTTACAGAACAA 58.295 40.909 0.00 0.00 35.06 2.83
1537 1595 3.352554 TCGCTACAACGTTACAGAACA 57.647 42.857 0.00 0.00 35.06 3.18
1538 1596 4.685020 CTTTCGCTACAACGTTACAGAAC 58.315 43.478 0.00 0.00 0.00 3.01
1539 1597 3.182972 GCTTTCGCTACAACGTTACAGAA 59.817 43.478 0.00 0.20 0.00 3.02
1564 1634 4.797471 CAGGATCAAAATTCGAGCAAACA 58.203 39.130 0.00 0.00 0.00 2.83
1569 1639 1.066152 GGGCAGGATCAAAATTCGAGC 59.934 52.381 0.00 0.00 0.00 5.03
1589 1659 2.315925 ACAATGGCTATCGTCCACAG 57.684 50.000 0.00 0.00 36.26 3.66
1591 1661 3.381949 GAGTACAATGGCTATCGTCCAC 58.618 50.000 0.00 0.00 36.26 4.02
1596 1666 3.556513 GAGACGAGTACAATGGCTATCG 58.443 50.000 0.00 0.00 36.32 2.92
1597 1667 3.305471 GGGAGACGAGTACAATGGCTATC 60.305 52.174 0.00 0.00 0.00 2.08
1624 1694 4.110036 ACAAGCAGTTTCACAAGTTTCC 57.890 40.909 0.00 0.00 0.00 3.13
1652 1722 9.314321 ACATTCGTTAGATAACATTACCAAGAG 57.686 33.333 3.81 0.00 35.99 2.85
1654 1724 9.093970 TGACATTCGTTAGATAACATTACCAAG 57.906 33.333 3.81 0.00 35.99 3.61
1670 1741 1.156736 CTTTCCGGCTGACATTCGTT 58.843 50.000 0.00 0.00 0.00 3.85
1688 1759 0.763035 ACGTTAGCTTGTCAACCCCT 59.237 50.000 0.00 0.00 0.00 4.79
1702 1773 3.064271 GCAACTGTGAGGAAACAACGTTA 59.936 43.478 0.00 0.00 0.00 3.18
1750 1821 9.893305 AATGACAAGAAGGTATTTTTCGTTTAG 57.107 29.630 0.00 0.00 0.00 1.85
1785 1856 7.984050 TGCTAATTTCTTCAAAACCACATTCAA 59.016 29.630 0.00 0.00 0.00 2.69
1786 1857 7.495901 TGCTAATTTCTTCAAAACCACATTCA 58.504 30.769 0.00 0.00 0.00 2.57
1829 1900 3.953874 TTCAAACGATTTCGCTGACAA 57.046 38.095 0.00 0.00 44.43 3.18
1842 1913 2.425668 GGTGGGGGTGATATTTCAAACG 59.574 50.000 0.00 0.00 32.48 3.60
1846 1917 0.930726 GGGGTGGGGGTGATATTTCA 59.069 55.000 0.00 0.00 0.00 2.69
1861 1932 1.005566 CTCTAGTAGGGGGAGGGGGT 61.006 65.000 0.00 0.00 0.00 4.95
1864 1935 2.180308 ACATTCTCTAGTAGGGGGAGGG 59.820 54.545 0.00 0.00 0.00 4.30
1865 1936 3.621682 ACATTCTCTAGTAGGGGGAGG 57.378 52.381 0.00 0.00 0.00 4.30
1866 1937 3.570550 CGAACATTCTCTAGTAGGGGGAG 59.429 52.174 0.00 0.00 0.00 4.30
1867 1938 3.053095 ACGAACATTCTCTAGTAGGGGGA 60.053 47.826 0.00 0.00 0.00 4.81
1868 1939 3.297736 ACGAACATTCTCTAGTAGGGGG 58.702 50.000 0.00 0.00 0.00 5.40
1869 1940 3.003482 CGACGAACATTCTCTAGTAGGGG 59.997 52.174 0.00 0.00 0.00 4.79
1870 1941 3.003482 CCGACGAACATTCTCTAGTAGGG 59.997 52.174 0.00 0.00 0.00 3.53
1871 1942 3.548415 GCCGACGAACATTCTCTAGTAGG 60.548 52.174 0.00 0.00 0.00 3.18
1872 1943 3.312973 AGCCGACGAACATTCTCTAGTAG 59.687 47.826 0.00 0.00 0.00 2.57
1873 1944 3.276857 AGCCGACGAACATTCTCTAGTA 58.723 45.455 0.00 0.00 0.00 1.82
1874 1945 2.093106 AGCCGACGAACATTCTCTAGT 58.907 47.619 0.00 0.00 0.00 2.57
1875 1946 2.853731 AGCCGACGAACATTCTCTAG 57.146 50.000 0.00 0.00 0.00 2.43
1876 1947 3.943381 TCTTAGCCGACGAACATTCTCTA 59.057 43.478 0.00 0.00 0.00 2.43
1877 1948 2.753452 TCTTAGCCGACGAACATTCTCT 59.247 45.455 0.00 0.00 0.00 3.10
1878 1949 3.109619 CTCTTAGCCGACGAACATTCTC 58.890 50.000 0.00 0.00 0.00 2.87
1879 1950 2.159226 CCTCTTAGCCGACGAACATTCT 60.159 50.000 0.00 0.00 0.00 2.40
1880 1951 2.194271 CCTCTTAGCCGACGAACATTC 58.806 52.381 0.00 0.00 0.00 2.67
1881 1952 1.134788 CCCTCTTAGCCGACGAACATT 60.135 52.381 0.00 0.00 0.00 2.71
1882 1953 0.460311 CCCTCTTAGCCGACGAACAT 59.540 55.000 0.00 0.00 0.00 2.71
1883 1954 0.896940 ACCCTCTTAGCCGACGAACA 60.897 55.000 0.00 0.00 0.00 3.18
1884 1955 0.179142 GACCCTCTTAGCCGACGAAC 60.179 60.000 0.00 0.00 0.00 3.95
1885 1956 1.318158 GGACCCTCTTAGCCGACGAA 61.318 60.000 0.00 0.00 0.00 3.85
1886 1957 1.751927 GGACCCTCTTAGCCGACGA 60.752 63.158 0.00 0.00 0.00 4.20
1887 1958 0.465097 TAGGACCCTCTTAGCCGACG 60.465 60.000 0.00 0.00 0.00 5.12
1888 1959 1.772836 TTAGGACCCTCTTAGCCGAC 58.227 55.000 0.00 0.00 0.00 4.79
1889 1960 2.537633 TTTAGGACCCTCTTAGCCGA 57.462 50.000 0.00 0.00 0.00 5.54
1890 1961 3.840124 AATTTAGGACCCTCTTAGCCG 57.160 47.619 0.00 0.00 0.00 5.52
1891 1962 6.542735 CACTAAAATTTAGGACCCTCTTAGCC 59.457 42.308 16.15 0.00 0.00 3.93
1892 1963 7.336396 TCACTAAAATTTAGGACCCTCTTAGC 58.664 38.462 16.15 0.00 0.00 3.09
1926 2161 8.477419 TTTCTTAAACATCCATTTCCTCTGTT 57.523 30.769 0.00 0.00 0.00 3.16
1927 2162 8.477419 TTTTCTTAAACATCCATTTCCTCTGT 57.523 30.769 0.00 0.00 0.00 3.41
1928 2163 9.196552 GTTTTTCTTAAACATCCATTTCCTCTG 57.803 33.333 0.00 0.00 0.00 3.35
1929 2164 8.923270 TGTTTTTCTTAAACATCCATTTCCTCT 58.077 29.630 0.00 0.00 35.45 3.69
1930 2165 8.978539 GTGTTTTTCTTAAACATCCATTTCCTC 58.021 33.333 6.38 0.00 41.51 3.71
1932 2167 8.655651 TGTGTTTTTCTTAAACATCCATTTCC 57.344 30.769 6.38 0.00 41.51 3.13
1933 2168 9.313118 ACTGTGTTTTTCTTAAACATCCATTTC 57.687 29.630 6.38 0.00 41.51 2.17
1936 2171 8.908903 TGTACTGTGTTTTTCTTAAACATCCAT 58.091 29.630 6.38 0.00 41.51 3.41
1937 2172 8.282455 TGTACTGTGTTTTTCTTAAACATCCA 57.718 30.769 6.38 1.28 41.51 3.41
1961 2200 5.458779 TCGTGTATATGAGCGACTTCAATTG 59.541 40.000 0.00 0.00 0.00 2.32
1993 2235 7.601705 TCATATGATCACACATACAGGAGAA 57.398 36.000 0.00 0.00 35.91 2.87
1996 2238 6.183360 TGCTTCATATGATCACACATACAGGA 60.183 38.462 6.17 0.00 35.91 3.86
1999 2241 7.935210 AGATTGCTTCATATGATCACACATACA 59.065 33.333 6.17 0.00 35.91 2.29
2005 2247 9.082313 TCTAGTAGATTGCTTCATATGATCACA 57.918 33.333 6.17 2.60 0.00 3.58
2010 2252 8.747471 CCAGATCTAGTAGATTGCTTCATATGA 58.253 37.037 13.92 0.00 34.53 2.15
2011 2253 7.492020 GCCAGATCTAGTAGATTGCTTCATATG 59.508 40.741 13.92 0.00 34.53 1.78
2012 2254 7.399765 AGCCAGATCTAGTAGATTGCTTCATAT 59.600 37.037 19.24 5.10 34.53 1.78
2013 2255 6.723515 AGCCAGATCTAGTAGATTGCTTCATA 59.276 38.462 19.24 0.00 34.53 2.15
2014 2256 5.543405 AGCCAGATCTAGTAGATTGCTTCAT 59.457 40.000 19.24 5.85 34.53 2.57
2015 2257 4.898265 AGCCAGATCTAGTAGATTGCTTCA 59.102 41.667 19.24 0.00 34.53 3.02
2016 2258 5.010516 TCAGCCAGATCTAGTAGATTGCTTC 59.989 44.000 21.06 8.99 34.53 3.86
2017 2259 4.898265 TCAGCCAGATCTAGTAGATTGCTT 59.102 41.667 21.06 10.57 34.53 3.91
2018 2260 4.280677 GTCAGCCAGATCTAGTAGATTGCT 59.719 45.833 19.24 19.24 34.53 3.91
2019 2261 4.038522 TGTCAGCCAGATCTAGTAGATTGC 59.961 45.833 13.92 15.48 34.53 3.56
2020 2262 5.781210 TGTCAGCCAGATCTAGTAGATTG 57.219 43.478 13.92 12.77 34.53 2.67
2021 2263 6.014669 GGAATGTCAGCCAGATCTAGTAGATT 60.015 42.308 13.92 2.18 34.53 2.40
2022 2264 5.480073 GGAATGTCAGCCAGATCTAGTAGAT 59.520 44.000 12.62 12.62 37.73 1.98
2023 2265 4.830046 GGAATGTCAGCCAGATCTAGTAGA 59.170 45.833 1.45 1.45 0.00 2.59
2024 2266 4.586421 TGGAATGTCAGCCAGATCTAGTAG 59.414 45.833 0.00 0.00 0.00 2.57
2025 2267 4.546674 TGGAATGTCAGCCAGATCTAGTA 58.453 43.478 0.00 0.00 0.00 1.82
2026 2268 3.378512 TGGAATGTCAGCCAGATCTAGT 58.621 45.455 0.00 0.00 0.00 2.57
2027 2269 4.316645 CATGGAATGTCAGCCAGATCTAG 58.683 47.826 0.00 0.00 40.20 2.43
2028 2270 4.347360 CATGGAATGTCAGCCAGATCTA 57.653 45.455 0.00 0.00 40.20 1.98
2029 2271 3.210232 CATGGAATGTCAGCCAGATCT 57.790 47.619 0.00 0.00 40.20 2.75
2060 2302 3.521529 ATCCCGGTAGCGAGCATGC 62.522 63.158 17.33 10.51 0.00 4.06
2061 2303 1.665916 CATCCCGGTAGCGAGCATG 60.666 63.158 17.33 10.39 0.00 4.06
2062 2304 2.088674 GACATCCCGGTAGCGAGCAT 62.089 60.000 17.33 1.25 0.00 3.79
2063 2305 2.758327 ACATCCCGGTAGCGAGCA 60.758 61.111 17.33 0.00 0.00 4.26
2064 2306 2.027751 GACATCCCGGTAGCGAGC 59.972 66.667 17.33 0.00 0.00 5.03
2065 2307 2.331805 CGACATCCCGGTAGCGAG 59.668 66.667 17.33 1.65 0.00 5.03
2066 2308 3.896133 GCGACATCCCGGTAGCGA 61.896 66.667 17.33 0.00 30.00 4.93
2067 2309 4.944372 GGCGACATCCCGGTAGCG 62.944 72.222 7.49 7.49 39.86 4.26
2068 2310 4.944372 CGGCGACATCCCGGTAGC 62.944 72.222 0.00 0.00 41.99 3.58
2094 2336 3.365291 TATGGCAGGTCGCGACACC 62.365 63.158 37.26 32.20 43.84 4.16
2095 2337 1.878522 CTATGGCAGGTCGCGACAC 60.879 63.158 37.26 26.45 43.84 3.67
2096 2338 2.348104 ACTATGGCAGGTCGCGACA 61.348 57.895 37.26 19.58 43.84 4.35
2097 2339 1.878522 CACTATGGCAGGTCGCGAC 60.879 63.158 30.67 30.67 43.84 5.19
2098 2340 2.494445 CACTATGGCAGGTCGCGA 59.506 61.111 3.71 3.71 43.84 5.87
2099 2341 3.264897 GCACTATGGCAGGTCGCG 61.265 66.667 0.00 0.00 43.84 5.87
2100 2342 2.897350 GGCACTATGGCAGGTCGC 60.897 66.667 0.00 1.91 43.14 5.19
2101 2343 1.522355 CAGGCACTATGGCAGGTCG 60.522 63.158 5.10 0.00 46.46 4.79
2102 2344 0.471617 ATCAGGCACTATGGCAGGTC 59.528 55.000 5.10 0.00 46.46 3.85
2103 2345 1.806496 TATCAGGCACTATGGCAGGT 58.194 50.000 5.10 0.00 46.46 4.00
2104 2346 2.936919 TTATCAGGCACTATGGCAGG 57.063 50.000 5.10 0.00 46.46 4.85
2105 2347 3.748083 ACATTATCAGGCACTATGGCAG 58.252 45.455 5.10 0.00 46.46 4.85
2106 2348 3.862877 ACATTATCAGGCACTATGGCA 57.137 42.857 5.10 0.00 46.46 4.92
2107 2349 4.580167 TGAAACATTATCAGGCACTATGGC 59.420 41.667 0.00 0.00 44.10 4.40
2108 2350 5.824624 ACTGAAACATTATCAGGCACTATGG 59.175 40.000 8.26 0.00 46.81 2.74
2109 2351 6.722301 CACTGAAACATTATCAGGCACTATG 58.278 40.000 8.26 0.00 46.81 2.23
2110 2352 5.297776 GCACTGAAACATTATCAGGCACTAT 59.702 40.000 8.26 0.00 46.81 2.12
2111 2353 4.635765 GCACTGAAACATTATCAGGCACTA 59.364 41.667 8.26 0.00 46.81 2.74
2112 2354 3.441572 GCACTGAAACATTATCAGGCACT 59.558 43.478 8.26 0.00 46.81 4.40
2113 2355 3.428045 GGCACTGAAACATTATCAGGCAC 60.428 47.826 8.26 0.00 46.81 5.01
2114 2356 2.754552 GGCACTGAAACATTATCAGGCA 59.245 45.455 8.26 0.00 46.81 4.75
2115 2357 3.019564 AGGCACTGAAACATTATCAGGC 58.980 45.455 8.26 8.03 46.81 4.85
2130 2372 2.304180 AGCAGACACTTTATCAGGCACT 59.696 45.455 0.00 0.00 43.88 4.40
2131 2373 2.675348 GAGCAGACACTTTATCAGGCAC 59.325 50.000 0.00 0.00 0.00 5.01
2132 2374 2.355108 GGAGCAGACACTTTATCAGGCA 60.355 50.000 0.00 0.00 0.00 4.75
2133 2375 2.284190 GGAGCAGACACTTTATCAGGC 58.716 52.381 0.00 0.00 0.00 4.85
2134 2376 2.503356 AGGGAGCAGACACTTTATCAGG 59.497 50.000 0.00 0.00 0.00 3.86
2135 2377 3.450457 AGAGGGAGCAGACACTTTATCAG 59.550 47.826 0.00 0.00 0.00 2.90
2136 2378 3.445008 AGAGGGAGCAGACACTTTATCA 58.555 45.455 0.00 0.00 0.00 2.15
2137 2379 3.181470 GGAGAGGGAGCAGACACTTTATC 60.181 52.174 0.00 0.00 0.00 1.75
2138 2380 2.769095 GGAGAGGGAGCAGACACTTTAT 59.231 50.000 0.00 0.00 0.00 1.40
2139 2381 2.180276 GGAGAGGGAGCAGACACTTTA 58.820 52.381 0.00 0.00 0.00 1.85
2140 2382 0.980423 GGAGAGGGAGCAGACACTTT 59.020 55.000 0.00 0.00 0.00 2.66
2141 2383 0.178921 TGGAGAGGGAGCAGACACTT 60.179 55.000 0.00 0.00 0.00 3.16
2142 2384 0.042431 ATGGAGAGGGAGCAGACACT 59.958 55.000 0.00 0.00 0.00 3.55
2143 2385 0.908198 AATGGAGAGGGAGCAGACAC 59.092 55.000 0.00 0.00 0.00 3.67
2144 2386 0.907486 CAATGGAGAGGGAGCAGACA 59.093 55.000 0.00 0.00 0.00 3.41
2145 2387 0.463474 GCAATGGAGAGGGAGCAGAC 60.463 60.000 0.00 0.00 0.00 3.51
2146 2388 1.910722 GCAATGGAGAGGGAGCAGA 59.089 57.895 0.00 0.00 0.00 4.26
2147 2389 1.523258 CGCAATGGAGAGGGAGCAG 60.523 63.158 0.00 0.00 0.00 4.24
2148 2390 0.975556 TACGCAATGGAGAGGGAGCA 60.976 55.000 0.00 0.00 0.00 4.26
2149 2391 0.394565 ATACGCAATGGAGAGGGAGC 59.605 55.000 0.00 0.00 0.00 4.70
2150 2392 2.918712 AATACGCAATGGAGAGGGAG 57.081 50.000 0.00 0.00 0.00 4.30
2151 2393 2.158813 GGAAATACGCAATGGAGAGGGA 60.159 50.000 0.00 0.00 0.00 4.20
2152 2394 2.222027 GGAAATACGCAATGGAGAGGG 58.778 52.381 0.00 0.00 0.00 4.30
2153 2395 2.158755 AGGGAAATACGCAATGGAGAGG 60.159 50.000 0.00 0.00 0.00 3.69
2154 2396 3.134458 GAGGGAAATACGCAATGGAGAG 58.866 50.000 0.00 0.00 0.00 3.20
2155 2397 2.483013 CGAGGGAAATACGCAATGGAGA 60.483 50.000 0.00 0.00 0.00 3.71
2156 2398 1.867233 CGAGGGAAATACGCAATGGAG 59.133 52.381 0.00 0.00 0.00 3.86
2157 2399 1.483004 TCGAGGGAAATACGCAATGGA 59.517 47.619 0.00 0.00 0.00 3.41
2158 2400 1.597663 GTCGAGGGAAATACGCAATGG 59.402 52.381 0.00 0.00 0.00 3.16
2159 2401 2.276201 TGTCGAGGGAAATACGCAATG 58.724 47.619 0.00 0.00 0.00 2.82
2160 2402 2.684001 TGTCGAGGGAAATACGCAAT 57.316 45.000 0.00 0.00 0.00 3.56
2161 2403 2.684001 ATGTCGAGGGAAATACGCAA 57.316 45.000 0.00 0.00 0.00 4.85
2162 2404 2.545113 GCTATGTCGAGGGAAATACGCA 60.545 50.000 0.00 0.00 0.00 5.24
2163 2405 2.059541 GCTATGTCGAGGGAAATACGC 58.940 52.381 0.00 0.00 0.00 4.42
2164 2406 2.031420 TCGCTATGTCGAGGGAAATACG 60.031 50.000 0.00 0.00 35.64 3.06
2165 2407 3.637998 TCGCTATGTCGAGGGAAATAC 57.362 47.619 0.00 0.00 35.64 1.89
2174 2416 4.993905 TGAATTTCTTCTCGCTATGTCGA 58.006 39.130 0.00 0.00 36.94 4.20
2175 2417 5.037385 TCTGAATTTCTTCTCGCTATGTCG 58.963 41.667 0.00 0.00 32.29 4.35
2176 2418 6.478344 ACATCTGAATTTCTTCTCGCTATGTC 59.522 38.462 0.00 0.00 32.29 3.06
2177 2419 6.344500 ACATCTGAATTTCTTCTCGCTATGT 58.656 36.000 0.00 0.00 32.29 2.29
2178 2420 6.345644 CGACATCTGAATTTCTTCTCGCTATG 60.346 42.308 0.00 0.00 32.29 2.23
2179 2421 5.689514 CGACATCTGAATTTCTTCTCGCTAT 59.310 40.000 0.00 0.00 32.29 2.97
2180 2422 5.037385 CGACATCTGAATTTCTTCTCGCTA 58.963 41.667 0.00 0.00 32.29 4.26
2181 2423 3.862267 CGACATCTGAATTTCTTCTCGCT 59.138 43.478 0.00 0.00 32.29 4.93
2182 2424 3.859961 TCGACATCTGAATTTCTTCTCGC 59.140 43.478 0.00 0.00 32.29 5.03
2183 2425 5.174761 GGATCGACATCTGAATTTCTTCTCG 59.825 44.000 0.00 0.00 32.29 4.04
2184 2426 6.279882 AGGATCGACATCTGAATTTCTTCTC 58.720 40.000 0.00 0.00 32.29 2.87
2185 2427 6.232581 AGGATCGACATCTGAATTTCTTCT 57.767 37.500 0.00 0.00 32.29 2.85
2186 2428 6.760770 AGAAGGATCGACATCTGAATTTCTTC 59.239 38.462 0.00 0.00 0.00 2.87
2187 2429 6.538021 CAGAAGGATCGACATCTGAATTTCTT 59.462 38.462 11.20 0.00 41.38 2.52
2188 2430 6.047870 CAGAAGGATCGACATCTGAATTTCT 58.952 40.000 11.20 0.00 41.38 2.52
2189 2431 5.277250 GCAGAAGGATCGACATCTGAATTTC 60.277 44.000 17.71 0.00 41.38 2.17
2190 2432 4.574013 GCAGAAGGATCGACATCTGAATTT 59.426 41.667 17.71 0.00 41.38 1.82
2191 2433 4.125703 GCAGAAGGATCGACATCTGAATT 58.874 43.478 17.71 0.00 41.38 2.17
2192 2434 3.133542 TGCAGAAGGATCGACATCTGAAT 59.866 43.478 17.71 0.00 41.38 2.57
2193 2435 2.497273 TGCAGAAGGATCGACATCTGAA 59.503 45.455 17.71 8.39 41.38 3.02
2194 2436 2.100418 CTGCAGAAGGATCGACATCTGA 59.900 50.000 8.42 6.65 41.38 3.27
2195 2437 2.471818 CTGCAGAAGGATCGACATCTG 58.528 52.381 8.42 11.96 41.69 2.90
2196 2438 1.202510 GCTGCAGAAGGATCGACATCT 60.203 52.381 20.43 0.00 0.00 2.90
2197 2439 1.216122 GCTGCAGAAGGATCGACATC 58.784 55.000 20.43 0.00 0.00 3.06
2198 2440 0.538584 TGCTGCAGAAGGATCGACAT 59.461 50.000 20.43 0.00 0.00 3.06
2199 2441 0.321346 TTGCTGCAGAAGGATCGACA 59.679 50.000 20.43 0.00 0.00 4.35
2200 2442 1.396301 CTTTGCTGCAGAAGGATCGAC 59.604 52.381 20.43 0.00 0.00 4.20
2201 2443 1.002430 ACTTTGCTGCAGAAGGATCGA 59.998 47.619 20.43 0.00 0.00 3.59
2202 2444 1.396301 GACTTTGCTGCAGAAGGATCG 59.604 52.381 20.43 0.49 0.00 3.69
2203 2445 2.419324 CTGACTTTGCTGCAGAAGGATC 59.581 50.000 20.43 9.26 0.00 3.36
2204 2446 2.224719 ACTGACTTTGCTGCAGAAGGAT 60.225 45.455 20.43 0.00 33.94 3.24
2205 2447 1.141657 ACTGACTTTGCTGCAGAAGGA 59.858 47.619 20.43 3.67 33.94 3.36
2206 2448 1.602311 ACTGACTTTGCTGCAGAAGG 58.398 50.000 20.43 11.70 33.94 3.46
2207 2449 3.314635 AGAAACTGACTTTGCTGCAGAAG 59.685 43.478 20.43 15.62 33.94 2.85
2208 2450 3.282021 AGAAACTGACTTTGCTGCAGAA 58.718 40.909 20.43 2.96 33.94 3.02
2209 2451 2.874701 GAGAAACTGACTTTGCTGCAGA 59.125 45.455 20.43 0.00 33.94 4.26
2210 2452 2.877168 AGAGAAACTGACTTTGCTGCAG 59.123 45.455 10.11 10.11 35.81 4.41
2211 2453 2.874701 GAGAGAAACTGACTTTGCTGCA 59.125 45.455 0.00 0.00 0.00 4.41
2212 2454 2.874701 TGAGAGAAACTGACTTTGCTGC 59.125 45.455 0.00 0.00 0.00 5.25
2213 2455 4.753610 TGATGAGAGAAACTGACTTTGCTG 59.246 41.667 0.00 0.00 0.00 4.41
2214 2456 4.965814 TGATGAGAGAAACTGACTTTGCT 58.034 39.130 0.00 0.00 0.00 3.91
2215 2457 5.876612 ATGATGAGAGAAACTGACTTTGC 57.123 39.130 0.00 0.00 0.00 3.68
2216 2458 6.401903 CGGAATGATGAGAGAAACTGACTTTG 60.402 42.308 0.00 0.00 0.00 2.77
2217 2459 5.641209 CGGAATGATGAGAGAAACTGACTTT 59.359 40.000 0.00 0.00 0.00 2.66
2218 2460 5.047021 TCGGAATGATGAGAGAAACTGACTT 60.047 40.000 0.00 0.00 0.00 3.01
2219 2461 4.464244 TCGGAATGATGAGAGAAACTGACT 59.536 41.667 0.00 0.00 0.00 3.41
2220 2462 4.564769 GTCGGAATGATGAGAGAAACTGAC 59.435 45.833 0.00 0.00 0.00 3.51
2221 2463 4.464244 AGTCGGAATGATGAGAGAAACTGA 59.536 41.667 0.00 0.00 0.00 3.41
2222 2464 4.753233 AGTCGGAATGATGAGAGAAACTG 58.247 43.478 0.00 0.00 0.00 3.16
2223 2465 4.709397 AGAGTCGGAATGATGAGAGAAACT 59.291 41.667 0.00 0.00 0.00 2.66
2224 2466 5.004922 AGAGTCGGAATGATGAGAGAAAC 57.995 43.478 0.00 0.00 0.00 2.78
2225 2467 6.547510 TGATAGAGTCGGAATGATGAGAGAAA 59.452 38.462 0.00 0.00 0.00 2.52
2226 2468 6.064717 TGATAGAGTCGGAATGATGAGAGAA 58.935 40.000 0.00 0.00 0.00 2.87
2227 2469 5.625150 TGATAGAGTCGGAATGATGAGAGA 58.375 41.667 0.00 0.00 0.00 3.10
2228 2470 5.956068 TGATAGAGTCGGAATGATGAGAG 57.044 43.478 0.00 0.00 0.00 3.20
2229 2471 6.907853 AATGATAGAGTCGGAATGATGAGA 57.092 37.500 0.00 0.00 0.00 3.27
2230 2472 7.959689 AAAATGATAGAGTCGGAATGATGAG 57.040 36.000 0.00 0.00 0.00 2.90
2231 2473 9.428097 CATAAAATGATAGAGTCGGAATGATGA 57.572 33.333 0.00 0.00 0.00 2.92
2232 2474 9.428097 TCATAAAATGATAGAGTCGGAATGATG 57.572 33.333 0.00 0.00 33.59 3.07
2249 2491 9.177304 CGGAAATCACTTCATCATCATAAAATG 57.823 33.333 0.00 0.00 35.55 2.32
2250 2492 8.906867 ACGGAAATCACTTCATCATCATAAAAT 58.093 29.630 0.00 0.00 35.55 1.82
2251 2493 8.279970 ACGGAAATCACTTCATCATCATAAAA 57.720 30.769 0.00 0.00 35.55 1.52
2252 2494 7.864108 ACGGAAATCACTTCATCATCATAAA 57.136 32.000 0.00 0.00 35.55 1.40
2253 2495 7.552330 TCAACGGAAATCACTTCATCATCATAA 59.448 33.333 0.00 0.00 35.55 1.90
2254 2496 7.047271 TCAACGGAAATCACTTCATCATCATA 58.953 34.615 0.00 0.00 35.55 2.15
2255 2497 5.882000 TCAACGGAAATCACTTCATCATCAT 59.118 36.000 0.00 0.00 35.55 2.45
2256 2498 5.244755 TCAACGGAAATCACTTCATCATCA 58.755 37.500 0.00 0.00 35.55 3.07
2257 2499 5.801350 TCAACGGAAATCACTTCATCATC 57.199 39.130 0.00 0.00 35.55 2.92
2258 2500 5.939883 TCTTCAACGGAAATCACTTCATCAT 59.060 36.000 0.00 0.00 35.55 2.45
2259 2501 5.304778 TCTTCAACGGAAATCACTTCATCA 58.695 37.500 0.00 0.00 35.55 3.07
2260 2502 5.862924 TCTTCAACGGAAATCACTTCATC 57.137 39.130 0.00 0.00 35.55 2.92
2261 2503 5.939883 TCATCTTCAACGGAAATCACTTCAT 59.060 36.000 0.00 0.00 35.55 2.57
2262 2504 5.304778 TCATCTTCAACGGAAATCACTTCA 58.695 37.500 0.00 0.00 35.55 3.02
2263 2505 5.672321 GCTCATCTTCAACGGAAATCACTTC 60.672 44.000 0.00 0.00 31.35 3.01
2264 2506 4.154918 GCTCATCTTCAACGGAAATCACTT 59.845 41.667 0.00 0.00 31.35 3.16
2265 2507 3.686726 GCTCATCTTCAACGGAAATCACT 59.313 43.478 0.00 0.00 31.35 3.41
2266 2508 3.686726 AGCTCATCTTCAACGGAAATCAC 59.313 43.478 0.00 0.00 31.35 3.06
2267 2509 3.935203 GAGCTCATCTTCAACGGAAATCA 59.065 43.478 9.40 0.00 31.35 2.57
2268 2510 3.935203 TGAGCTCATCTTCAACGGAAATC 59.065 43.478 13.74 0.00 31.35 2.17
2269 2511 3.942829 TGAGCTCATCTTCAACGGAAAT 58.057 40.909 13.74 0.00 31.35 2.17
2270 2512 3.401033 TGAGCTCATCTTCAACGGAAA 57.599 42.857 13.74 0.00 31.35 3.13
2271 2513 3.401033 TTGAGCTCATCTTCAACGGAA 57.599 42.857 19.04 0.00 0.00 4.30
2272 2514 3.401033 TTTGAGCTCATCTTCAACGGA 57.599 42.857 19.04 0.00 0.00 4.69
2273 2515 5.049818 GGATATTTGAGCTCATCTTCAACGG 60.050 44.000 19.04 0.00 0.00 4.44
2274 2516 5.525012 TGGATATTTGAGCTCATCTTCAACG 59.475 40.000 19.04 0.00 0.00 4.10
2275 2517 6.932356 TGGATATTTGAGCTCATCTTCAAC 57.068 37.500 19.04 6.51 0.00 3.18
2276 2518 9.445878 GATATGGATATTTGAGCTCATCTTCAA 57.554 33.333 19.04 8.86 0.00 2.69
2277 2519 8.045507 GGATATGGATATTTGAGCTCATCTTCA 58.954 37.037 19.04 11.68 0.00 3.02
2278 2520 8.266473 AGGATATGGATATTTGAGCTCATCTTC 58.734 37.037 19.04 11.92 0.00 2.87
2279 2521 8.160434 AGGATATGGATATTTGAGCTCATCTT 57.840 34.615 19.04 7.98 0.00 2.40
2280 2522 7.752518 AGGATATGGATATTTGAGCTCATCT 57.247 36.000 19.04 10.44 0.00 2.90
2281 2523 7.201714 GCAAGGATATGGATATTTGAGCTCATC 60.202 40.741 19.04 11.94 0.00 2.92
2282 2524 6.602406 GCAAGGATATGGATATTTGAGCTCAT 59.398 38.462 19.04 6.10 0.00 2.90
2283 2525 5.942236 GCAAGGATATGGATATTTGAGCTCA 59.058 40.000 13.74 13.74 0.00 4.26
2284 2526 5.064452 CGCAAGGATATGGATATTTGAGCTC 59.936 44.000 6.82 6.82 0.00 4.09
2285 2527 4.940046 CGCAAGGATATGGATATTTGAGCT 59.060 41.667 0.00 0.00 0.00 4.09
2286 2528 4.937620 TCGCAAGGATATGGATATTTGAGC 59.062 41.667 0.00 0.00 38.47 4.26
2287 2529 5.064452 GCTCGCAAGGATATGGATATTTGAG 59.936 44.000 0.00 0.00 38.47 3.02
2288 2530 4.937620 GCTCGCAAGGATATGGATATTTGA 59.062 41.667 0.00 0.00 38.47 2.69
2289 2531 4.696877 TGCTCGCAAGGATATGGATATTTG 59.303 41.667 0.00 0.00 38.47 2.32
2290 2532 4.910195 TGCTCGCAAGGATATGGATATTT 58.090 39.130 0.00 0.00 38.47 1.40
2291 2533 4.558226 TGCTCGCAAGGATATGGATATT 57.442 40.909 0.00 0.00 38.47 1.28
2292 2534 4.019860 AGTTGCTCGCAAGGATATGGATAT 60.020 41.667 4.31 0.00 36.52 1.63
2293 2535 3.324846 AGTTGCTCGCAAGGATATGGATA 59.675 43.478 4.31 0.00 36.52 2.59
2294 2536 2.105477 AGTTGCTCGCAAGGATATGGAT 59.895 45.455 4.31 0.00 36.52 3.41
2295 2537 1.486310 AGTTGCTCGCAAGGATATGGA 59.514 47.619 4.31 0.00 36.52 3.41
2296 2538 1.600957 CAGTTGCTCGCAAGGATATGG 59.399 52.381 4.31 0.00 36.52 2.74
2297 2539 1.003116 GCAGTTGCTCGCAAGGATATG 60.003 52.381 4.31 1.38 36.52 1.78
2298 2540 1.303309 GCAGTTGCTCGCAAGGATAT 58.697 50.000 4.31 0.00 36.52 1.63
2299 2541 0.744414 GGCAGTTGCTCGCAAGGATA 60.744 55.000 4.31 0.00 41.70 2.59
2300 2542 2.042831 GGCAGTTGCTCGCAAGGAT 61.043 57.895 4.31 0.00 41.70 3.24
2301 2543 2.669569 GGCAGTTGCTCGCAAGGA 60.670 61.111 4.31 0.00 41.70 3.36
2302 2544 1.799258 AAAGGCAGTTGCTCGCAAGG 61.799 55.000 4.31 2.01 41.70 3.61
2303 2545 0.874390 TAAAGGCAGTTGCTCGCAAG 59.126 50.000 4.31 0.00 41.70 4.01
2304 2546 1.533625 ATAAAGGCAGTTGCTCGCAA 58.466 45.000 3.88 0.00 41.70 4.85
2305 2547 1.468520 GAATAAAGGCAGTTGCTCGCA 59.531 47.619 3.88 0.00 41.70 5.10
2306 2548 1.740025 AGAATAAAGGCAGTTGCTCGC 59.260 47.619 3.88 0.00 41.70 5.03
2307 2549 2.352960 GGAGAATAAAGGCAGTTGCTCG 59.647 50.000 3.88 0.00 41.70 5.03
2308 2550 3.127721 GTGGAGAATAAAGGCAGTTGCTC 59.872 47.826 3.88 0.00 41.70 4.26
2309 2551 3.084786 GTGGAGAATAAAGGCAGTTGCT 58.915 45.455 3.88 0.00 41.70 3.91
2310 2552 2.819608 TGTGGAGAATAAAGGCAGTTGC 59.180 45.455 0.00 0.00 41.14 4.17
2311 2553 3.441572 CCTGTGGAGAATAAAGGCAGTTG 59.558 47.826 0.00 0.00 0.00 3.16
2312 2554 3.690460 CCTGTGGAGAATAAAGGCAGTT 58.310 45.455 0.00 0.00 0.00 3.16
2313 2555 3.356529 CCTGTGGAGAATAAAGGCAGT 57.643 47.619 0.00 0.00 0.00 4.40
2317 2559 3.019564 CAAGGCCTGTGGAGAATAAAGG 58.980 50.000 5.69 0.00 0.00 3.11
2318 2560 3.019564 CCAAGGCCTGTGGAGAATAAAG 58.980 50.000 22.55 0.00 38.54 1.85
2319 2561 2.883888 GCCAAGGCCTGTGGAGAATAAA 60.884 50.000 28.09 0.00 38.54 1.40
2320 2562 1.340991 GCCAAGGCCTGTGGAGAATAA 60.341 52.381 28.09 0.00 38.54 1.40
2321 2563 0.255890 GCCAAGGCCTGTGGAGAATA 59.744 55.000 28.09 0.00 38.54 1.75
2322 2564 1.000396 GCCAAGGCCTGTGGAGAAT 60.000 57.895 28.09 0.96 38.54 2.40
2323 2565 2.436109 GCCAAGGCCTGTGGAGAA 59.564 61.111 28.09 0.00 38.54 2.87
2324 2566 4.020617 CGCCAAGGCCTGTGGAGA 62.021 66.667 28.09 0.00 38.12 3.71
2325 2567 4.335647 ACGCCAAGGCCTGTGGAG 62.336 66.667 28.09 26.60 41.32 3.86
2326 2568 4.329545 GACGCCAAGGCCTGTGGA 62.330 66.667 28.09 0.00 38.54 4.02
2327 2569 4.641645 TGACGCCAAGGCCTGTGG 62.642 66.667 22.63 22.63 39.33 4.17
2328 2570 2.133742 CTTTGACGCCAAGGCCTGTG 62.134 60.000 5.69 3.53 37.98 3.66
2329 2571 1.898574 CTTTGACGCCAAGGCCTGT 60.899 57.895 5.69 0.00 37.98 4.00
2330 2572 2.629656 CCTTTGACGCCAAGGCCTG 61.630 63.158 5.69 0.00 37.98 4.85
2331 2573 2.282462 CCTTTGACGCCAAGGCCT 60.282 61.111 0.00 0.00 37.98 5.19
2332 2574 3.373565 CCCTTTGACGCCAAGGCC 61.374 66.667 5.34 0.00 37.98 5.19
2333 2575 4.056125 GCCCTTTGACGCCAAGGC 62.056 66.667 0.00 0.00 36.75 4.35
2334 2576 3.373565 GGCCCTTTGACGCCAAGG 61.374 66.667 0.00 1.62 45.01 3.61
2338 2580 1.179174 AAAAGAGGCCCTTTGACGCC 61.179 55.000 16.87 0.00 43.90 5.68
2339 2581 0.241213 GAAAAGAGGCCCTTTGACGC 59.759 55.000 16.87 6.66 43.90 5.19
2340 2582 1.604604 TGAAAAGAGGCCCTTTGACG 58.395 50.000 16.87 0.00 43.90 4.35
2341 2583 3.366374 CGATTGAAAAGAGGCCCTTTGAC 60.366 47.826 16.87 14.41 43.90 3.18
2342 2584 2.819608 CGATTGAAAAGAGGCCCTTTGA 59.180 45.455 16.87 9.01 43.90 2.69
2343 2585 2.094545 CCGATTGAAAAGAGGCCCTTTG 60.095 50.000 16.87 6.34 43.90 2.77
2344 2586 2.171003 CCGATTGAAAAGAGGCCCTTT 58.829 47.619 12.02 12.02 46.47 3.11
2345 2587 1.354368 TCCGATTGAAAAGAGGCCCTT 59.646 47.619 0.00 0.00 36.47 3.95
2346 2588 0.991920 TCCGATTGAAAAGAGGCCCT 59.008 50.000 0.00 0.00 0.00 5.19
2347 2589 1.472878 GTTCCGATTGAAAAGAGGCCC 59.527 52.381 0.00 0.00 33.94 5.80
2348 2590 2.095212 GTGTTCCGATTGAAAAGAGGCC 60.095 50.000 0.00 0.00 33.94 5.19
2349 2591 2.814336 AGTGTTCCGATTGAAAAGAGGC 59.186 45.455 0.00 0.00 33.94 4.70
2350 2592 4.065088 TGAGTGTTCCGATTGAAAAGAGG 58.935 43.478 0.00 0.00 33.94 3.69
2351 2593 5.641209 AGATGAGTGTTCCGATTGAAAAGAG 59.359 40.000 0.00 0.00 33.94 2.85
2352 2594 5.551233 AGATGAGTGTTCCGATTGAAAAGA 58.449 37.500 0.00 0.00 33.94 2.52
2353 2595 5.869753 AGATGAGTGTTCCGATTGAAAAG 57.130 39.130 0.00 0.00 33.94 2.27
2354 2596 5.530915 ACAAGATGAGTGTTCCGATTGAAAA 59.469 36.000 0.00 0.00 33.94 2.29
2355 2597 5.063204 ACAAGATGAGTGTTCCGATTGAAA 58.937 37.500 0.00 0.00 33.94 2.69
2356 2598 4.641396 ACAAGATGAGTGTTCCGATTGAA 58.359 39.130 0.00 0.00 0.00 2.69
2357 2599 4.271696 ACAAGATGAGTGTTCCGATTGA 57.728 40.909 0.00 0.00 0.00 2.57
2358 2600 5.362556 AAACAAGATGAGTGTTCCGATTG 57.637 39.130 0.00 0.00 38.24 2.67
2359 2601 5.765182 AGAAAACAAGATGAGTGTTCCGATT 59.235 36.000 0.00 0.00 38.24 3.34
2360 2602 5.308825 AGAAAACAAGATGAGTGTTCCGAT 58.691 37.500 0.00 0.00 38.24 4.18
2361 2603 4.703897 AGAAAACAAGATGAGTGTTCCGA 58.296 39.130 0.00 0.00 38.24 4.55
2362 2604 5.424121 AAGAAAACAAGATGAGTGTTCCG 57.576 39.130 0.00 0.00 38.24 4.30
2363 2605 9.237846 CTTAAAAGAAAACAAGATGAGTGTTCC 57.762 33.333 0.00 0.00 38.24 3.62
2366 2608 9.396022 TCTCTTAAAAGAAAACAAGATGAGTGT 57.604 29.630 0.00 0.00 34.03 3.55
2367 2609 9.875675 CTCTCTTAAAAGAAAACAAGATGAGTG 57.124 33.333 0.00 0.00 34.03 3.51
2368 2610 9.620259 ACTCTCTTAAAAGAAAACAAGATGAGT 57.380 29.630 0.00 0.00 34.43 3.41
2370 2612 9.057089 GGACTCTCTTAAAAGAAAACAAGATGA 57.943 33.333 0.00 0.00 34.03 2.92
2371 2613 8.840321 TGGACTCTCTTAAAAGAAAACAAGATG 58.160 33.333 0.00 0.00 34.03 2.90
2372 2614 8.980481 TGGACTCTCTTAAAAGAAAACAAGAT 57.020 30.769 0.00 0.00 34.03 2.40
2373 2615 8.980481 ATGGACTCTCTTAAAAGAAAACAAGA 57.020 30.769 0.00 0.00 34.03 3.02
2375 2617 9.621629 TGTATGGACTCTCTTAAAAGAAAACAA 57.378 29.630 0.00 0.00 34.03 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.