Multiple sequence alignment - TraesCS2B01G407600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G407600 chr2B 100.000 2878 0 0 1 2878 578604119 578606996 0.000000e+00 5315.0
1 TraesCS2B01G407600 chr2B 83.729 295 37 8 2239 2530 232780041 232780327 4.730000e-68 268.0
2 TraesCS2B01G407600 chr2B 98.039 102 2 0 2730 2831 472911472 472911371 8.190000e-41 178.0
3 TraesCS2B01G407600 chr2B 98.020 101 2 0 2730 2830 5710994 5711094 2.950000e-40 176.0
4 TraesCS2B01G407600 chr2B 95.327 107 5 0 2728 2834 531146389 531146495 1.370000e-38 171.0
5 TraesCS2B01G407600 chr2B 86.598 97 9 1 1893 1985 192907625 192907721 1.410000e-18 104.0
6 TraesCS2B01G407600 chr2B 83.019 106 12 3 1884 1985 731605704 731605807 1.100000e-14 91.6
7 TraesCS2B01G407600 chr2D 90.550 1947 74 40 1 1894 492675346 492677235 0.000000e+00 2475.0
8 TraesCS2B01G407600 chr2D 93.689 206 13 0 2528 2733 492677494 492677699 2.790000e-80 309.0
9 TraesCS2B01G407600 chr2D 90.361 249 3 7 1994 2233 492677250 492677486 1.000000e-79 307.0
10 TraesCS2B01G407600 chr2D 85.833 240 29 4 2239 2477 30458437 30458672 1.710000e-62 250.0
11 TraesCS2B01G407600 chr2A 88.364 1779 93 51 196 1894 637983679 637985423 0.000000e+00 2034.0
12 TraesCS2B01G407600 chr2A 85.034 294 38 5 2239 2529 53918109 53918399 7.800000e-76 294.0
13 TraesCS2B01G407600 chr2A 90.640 203 19 0 2531 2733 637985671 637985873 1.310000e-68 270.0
14 TraesCS2B01G407600 chr2A 86.853 251 13 6 1994 2240 637985438 637985672 2.200000e-66 263.0
15 TraesCS2B01G407600 chr4B 89.078 293 22 7 2239 2529 66976600 66976316 3.530000e-94 355.0
16 TraesCS2B01G407600 chr4B 88.737 293 27 5 2239 2529 399269769 399269481 1.270000e-93 353.0
17 TraesCS2B01G407600 chr4B 86.441 177 20 2 2357 2532 142519280 142519453 1.050000e-44 191.0
18 TraesCS2B01G407600 chr4B 96.190 105 3 1 2730 2834 647646250 647646353 1.370000e-38 171.0
19 TraesCS2B01G407600 chr4B 80.412 97 14 2 1891 1985 423354721 423354628 5.150000e-08 69.4
20 TraesCS2B01G407600 chr6D 89.531 277 29 0 1171 1447 314056259 314056535 4.560000e-93 351.0
21 TraesCS2B01G407600 chr6B 89.531 277 29 0 1171 1447 512448211 512447935 4.560000e-93 351.0
22 TraesCS2B01G407600 chr6B 86.275 102 9 2 1889 1985 343781175 343781276 3.920000e-19 106.0
23 TraesCS2B01G407600 chr6A 88.176 296 32 3 1152 1447 451660052 451660344 1.640000e-92 350.0
24 TraesCS2B01G407600 chr6A 94.872 39 2 0 1947 1985 47135084 47135122 8.610000e-06 62.1
25 TraesCS2B01G407600 chr6A 100.000 28 0 0 1958 1985 604630700 604630673 5.000000e-03 52.8
26 TraesCS2B01G407600 chr1B 82.594 293 44 6 2239 2529 669004576 669004289 4.760000e-63 252.0
27 TraesCS2B01G407600 chr1B 82.253 293 43 7 2239 2529 390879118 390878833 7.970000e-61 244.0
28 TraesCS2B01G407600 chr1B 97.059 102 3 0 2728 2829 429766584 429766483 3.810000e-39 172.0
29 TraesCS2B01G407600 chr1B 83.838 99 12 3 1891 1985 683383597 683383499 1.100000e-14 91.6
30 TraesCS2B01G407600 chr1B 82.828 99 13 1 1891 1985 648132503 648132405 5.110000e-13 86.1
31 TraesCS2B01G407600 chr1B 85.542 83 8 3 1893 1971 3888856 3888938 1.840000e-12 84.2
32 TraesCS2B01G407600 chr7B 81.188 303 50 5 2236 2534 377050694 377050395 1.330000e-58 237.0
33 TraesCS2B01G407600 chr7B 91.525 118 8 2 2730 2847 693252728 693252613 8.250000e-36 161.0
34 TraesCS2B01G407600 chr5B 80.731 301 49 6 2239 2535 67814141 67813846 2.890000e-55 226.0
35 TraesCS2B01G407600 chr5B 80.989 263 45 3 1175 1436 501464953 501464695 1.350000e-48 204.0
36 TraesCS2B01G407600 chr5B 91.724 145 12 0 2385 2529 492183467 492183611 4.860000e-48 202.0
37 TraesCS2B01G407600 chr5B 86.869 99 9 4 1891 1985 561938597 561938499 1.090000e-19 108.0
38 TraesCS2B01G407600 chr5B 84.211 114 11 4 1880 1986 537533132 537533245 1.410000e-18 104.0
39 TraesCS2B01G407600 chr5B 86.905 84 7 1 1892 1971 185222847 185222930 1.100000e-14 91.6
40 TraesCS2B01G407600 chr5A 81.423 253 42 3 1176 1427 527905747 527905499 4.860000e-48 202.0
41 TraesCS2B01G407600 chr5D 81.176 255 41 5 1175 1427 415273199 415272950 6.290000e-47 198.0
42 TraesCS2B01G407600 chr5D 98.020 101 1 1 2730 2830 371278840 371278741 1.060000e-39 174.0
43 TraesCS2B01G407600 chr3D 98.020 101 2 0 2730 2830 582706286 582706386 2.950000e-40 176.0
44 TraesCS2B01G407600 chr3B 98.020 101 2 0 2730 2830 809037012 809037112 2.950000e-40 176.0
45 TraesCS2B01G407600 chr3B 90.588 85 4 1 1891 1971 667650244 667650328 3.030000e-20 110.0
46 TraesCS2B01G407600 chr3B 85.859 99 9 3 1893 1986 65336329 65336231 1.820000e-17 100.0
47 TraesCS2B01G407600 chr4D 79.739 153 27 4 1240 1390 457075167 457075317 1.090000e-19 108.0
48 TraesCS2B01G407600 chr4D 90.000 50 5 0 1935 1984 325121498 325121547 6.660000e-07 65.8
49 TraesCS2B01G407600 chr4D 100.000 30 0 0 1256 1285 132218614 132218643 4.010000e-04 56.5
50 TraesCS2B01G407600 chr1D 84.848 99 11 1 1891 1985 490538214 490538116 2.360000e-16 97.1
51 TraesCS2B01G407600 chr1D 100.000 31 0 0 1955 1985 268540358 268540328 1.110000e-04 58.4
52 TraesCS2B01G407600 chr7D 91.803 61 4 1 1922 1982 541243180 541243121 1.840000e-12 84.2
53 TraesCS2B01G407600 chr7D 88.060 67 8 0 1923 1989 586992312 586992378 2.380000e-11 80.5
54 TraesCS2B01G407600 chr7D 81.633 98 11 6 1893 1985 149851599 149851694 1.110000e-09 75.0
55 TraesCS2B01G407600 chr7D 89.655 58 5 1 1929 1985 611753638 611753695 3.980000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G407600 chr2B 578604119 578606996 2877 False 5315.000000 5315 100.000000 1 2878 1 chr2B.!!$F5 2877
1 TraesCS2B01G407600 chr2D 492675346 492677699 2353 False 1030.333333 2475 91.533333 1 2733 3 chr2D.!!$F2 2732
2 TraesCS2B01G407600 chr2A 637983679 637985873 2194 False 855.666667 2034 88.619000 196 2733 3 chr2A.!!$F2 2537

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
111 120 0.320771 AAACTAGTGGAGCGCACCAG 60.321 55.0 27.57 17.63 40.85 4.0 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2079 2219 0.17907 GTCCCCATTCGCCTCTTCTC 60.179 60.0 0.0 0.0 0.0 2.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 1.148157 CCAAGTGCTCGCCTATCACG 61.148 60.000 0.00 0.00 35.97 4.35
66 71 6.377080 TCTATCCTGAGTTACCATGATGTCT 58.623 40.000 0.00 0.00 0.00 3.41
84 93 3.119602 TGTCTCTTCCTGGTAAACGATCG 60.120 47.826 14.88 14.88 0.00 3.69
109 118 1.067071 AGTAAACTAGTGGAGCGCACC 60.067 52.381 17.78 17.78 0.00 5.01
111 120 0.320771 AAACTAGTGGAGCGCACCAG 60.321 55.000 27.57 17.63 40.85 4.00
169 193 2.425278 CGCGCTAGCTATAGTGTGC 58.575 57.895 13.93 5.02 41.61 4.57
171 195 1.692296 GCGCTAGCTATAGTGTGCTC 58.308 55.000 13.93 4.79 40.90 4.26
308 333 3.597728 CGACGGAGCTAGGCCCTC 61.598 72.222 0.00 0.00 0.00 4.30
309 334 2.123640 GACGGAGCTAGGCCCTCT 60.124 66.667 0.00 0.00 0.00 3.69
310 335 2.443016 ACGGAGCTAGGCCCTCTG 60.443 66.667 13.18 13.18 40.68 3.35
311 336 3.230245 CGGAGCTAGGCCCTCTGG 61.230 72.222 0.00 0.00 33.12 3.86
347 372 1.104630 GTCCTACCTGTTCCTCCTCG 58.895 60.000 0.00 0.00 0.00 4.63
429 461 2.158755 GCAAGCCCCATGATACACTACT 60.159 50.000 0.00 0.00 0.00 2.57
431 463 3.046283 AGCCCCATGATACACTACTGA 57.954 47.619 0.00 0.00 0.00 3.41
432 464 2.968574 AGCCCCATGATACACTACTGAG 59.031 50.000 0.00 0.00 0.00 3.35
434 466 3.576861 CCCCATGATACACTACTGAGGA 58.423 50.000 0.00 0.00 0.00 3.71
435 467 3.322254 CCCCATGATACACTACTGAGGAC 59.678 52.174 0.00 0.00 0.00 3.85
436 468 4.219115 CCCATGATACACTACTGAGGACT 58.781 47.826 0.00 0.00 0.00 3.85
437 469 4.038522 CCCATGATACACTACTGAGGACTG 59.961 50.000 0.00 0.00 0.00 3.51
438 470 4.038522 CCATGATACACTACTGAGGACTGG 59.961 50.000 0.00 0.00 0.00 4.00
439 471 3.632333 TGATACACTACTGAGGACTGGG 58.368 50.000 0.00 0.00 0.00 4.45
443 478 2.100989 CACTACTGAGGACTGGGGTAC 58.899 57.143 0.00 0.00 0.00 3.34
466 501 0.610174 TGATCCTTTCTCGTGCAGCT 59.390 50.000 0.00 0.00 0.00 4.24
600 659 3.679389 GGAAGGAAGACTTGAATGAGCA 58.321 45.455 0.00 0.00 40.21 4.26
733 795 4.704833 ATGCGCGACACTTGGCCT 62.705 61.111 12.10 0.00 0.00 5.19
767 830 4.927782 TTTGCGCGGTGTCAGGCT 62.928 61.111 8.83 0.00 0.00 4.58
775 838 4.626081 GTGTCAGGCTGCGTGGGT 62.626 66.667 20.70 0.00 0.00 4.51
803 867 1.064979 GGGAGGTTTCTTTATCCGCCA 60.065 52.381 5.67 0.00 41.77 5.69
870 934 2.300533 CGTCCGCCGGTATAAAACC 58.699 57.895 1.63 0.00 45.77 3.27
955 1024 1.134461 CCAGATCCAACAGAGCAGAGG 60.134 57.143 0.00 0.00 31.44 3.69
1020 1104 1.904287 TGGATTACCACCAGCAACAC 58.096 50.000 0.00 0.00 41.77 3.32
1021 1105 1.173913 GGATTACCACCAGCAACACC 58.826 55.000 0.00 0.00 35.97 4.16
1022 1106 1.546773 GGATTACCACCAGCAACACCA 60.547 52.381 0.00 0.00 35.97 4.17
1023 1107 1.812571 GATTACCACCAGCAACACCAG 59.187 52.381 0.00 0.00 0.00 4.00
1024 1108 0.821711 TTACCACCAGCAACACCAGC 60.822 55.000 0.00 0.00 0.00 4.85
1025 1109 1.988982 TACCACCAGCAACACCAGCA 61.989 55.000 0.00 0.00 0.00 4.41
1026 1110 2.558286 CCACCAGCAACACCAGCAG 61.558 63.158 0.00 0.00 0.00 4.24
1027 1111 2.908940 ACCAGCAACACCAGCAGC 60.909 61.111 0.00 0.00 0.00 5.25
1028 1112 2.908428 CCAGCAACACCAGCAGCA 60.908 61.111 0.00 0.00 0.00 4.41
1029 1113 2.643272 CAGCAACACCAGCAGCAG 59.357 61.111 0.00 0.00 0.00 4.24
1030 1114 3.292936 AGCAACACCAGCAGCAGC 61.293 61.111 0.00 0.00 42.56 5.25
1031 1115 3.598715 GCAACACCAGCAGCAGCA 61.599 61.111 3.17 0.00 45.49 4.41
1032 1116 2.333938 CAACACCAGCAGCAGCAC 59.666 61.111 3.17 0.00 45.49 4.40
1113 1227 1.766494 TGATGGGCATTGACATGGAC 58.234 50.000 0.00 0.00 0.00 4.02
1119 1233 1.406539 GGCATTGACATGGACATGGAC 59.593 52.381 15.94 10.08 42.91 4.02
1125 1239 2.292267 GACATGGACATGGACATGGAC 58.708 52.381 25.79 18.49 46.60 4.02
1209 1323 1.101635 CGGAGGAGCAGATACGGTCA 61.102 60.000 0.00 0.00 35.06 4.02
1419 1533 1.153939 CGTCGAGTCCCTCAAGCAG 60.154 63.158 0.00 0.00 0.00 4.24
1486 1615 7.436673 CACGTATTCTTAATCTCTTCTTCCCTG 59.563 40.741 0.00 0.00 0.00 4.45
1487 1616 7.124448 ACGTATTCTTAATCTCTTCTTCCCTGT 59.876 37.037 0.00 0.00 0.00 4.00
1488 1617 8.630917 CGTATTCTTAATCTCTTCTTCCCTGTA 58.369 37.037 0.00 0.00 0.00 2.74
1489 1618 9.752961 GTATTCTTAATCTCTTCTTCCCTGTAC 57.247 37.037 0.00 0.00 0.00 2.90
1490 1619 8.616799 ATTCTTAATCTCTTCTTCCCTGTACT 57.383 34.615 0.00 0.00 0.00 2.73
1496 1632 6.591750 TCTCTTCTTCCCTGTACTTACTTG 57.408 41.667 0.00 0.00 0.00 3.16
1760 1896 3.324099 CTCGGTGTCGGTGGAGTCG 62.324 68.421 0.00 0.00 36.95 4.18
1890 2026 2.914379 GCTTGAAGCCGTGTAGTGT 58.086 52.632 5.74 0.00 34.48 3.55
1891 2027 2.074547 GCTTGAAGCCGTGTAGTGTA 57.925 50.000 5.74 0.00 34.48 2.90
1892 2028 2.618053 GCTTGAAGCCGTGTAGTGTAT 58.382 47.619 5.74 0.00 34.48 2.29
1893 2029 3.777478 GCTTGAAGCCGTGTAGTGTATA 58.223 45.455 5.74 0.00 34.48 1.47
1894 2030 3.550678 GCTTGAAGCCGTGTAGTGTATAC 59.449 47.826 5.74 0.00 34.48 1.47
1896 2032 4.627611 TGAAGCCGTGTAGTGTATACTC 57.372 45.455 4.17 0.09 38.36 2.59
1898 2034 2.305009 AGCCGTGTAGTGTATACTCCC 58.695 52.381 4.17 0.00 38.36 4.30
1900 2036 2.292845 GCCGTGTAGTGTATACTCCCTC 59.707 54.545 4.17 0.00 38.36 4.30
1901 2037 2.883386 CCGTGTAGTGTATACTCCCTCC 59.117 54.545 4.17 0.00 38.36 4.30
1902 2038 2.547211 CGTGTAGTGTATACTCCCTCCG 59.453 54.545 4.17 0.00 38.36 4.63
1903 2039 3.549794 GTGTAGTGTATACTCCCTCCGT 58.450 50.000 4.17 0.00 38.36 4.69
1904 2040 3.563390 GTGTAGTGTATACTCCCTCCGTC 59.437 52.174 4.17 0.00 38.36 4.79
1905 2041 3.457380 TGTAGTGTATACTCCCTCCGTCT 59.543 47.826 4.17 0.00 38.36 4.18
1906 2042 3.211718 AGTGTATACTCCCTCCGTCTC 57.788 52.381 4.17 0.00 28.79 3.36
1908 2044 3.053842 AGTGTATACTCCCTCCGTCTCAA 60.054 47.826 4.17 0.00 28.79 3.02
1909 2045 3.698040 GTGTATACTCCCTCCGTCTCAAA 59.302 47.826 4.17 0.00 0.00 2.69
1910 2046 4.159135 GTGTATACTCCCTCCGTCTCAAAA 59.841 45.833 4.17 0.00 0.00 2.44
1911 2047 4.960469 TGTATACTCCCTCCGTCTCAAAAT 59.040 41.667 4.17 0.00 0.00 1.82
1912 2048 2.770164 ACTCCCTCCGTCTCAAAATG 57.230 50.000 0.00 0.00 0.00 2.32
1913 2049 1.978580 ACTCCCTCCGTCTCAAAATGT 59.021 47.619 0.00 0.00 0.00 2.71
1914 2050 2.028020 ACTCCCTCCGTCTCAAAATGTC 60.028 50.000 0.00 0.00 0.00 3.06
1915 2051 2.234908 CTCCCTCCGTCTCAAAATGTCT 59.765 50.000 0.00 0.00 0.00 3.41
1916 2052 2.637872 TCCCTCCGTCTCAAAATGTCTT 59.362 45.455 0.00 0.00 0.00 3.01
1917 2053 3.835978 TCCCTCCGTCTCAAAATGTCTTA 59.164 43.478 0.00 0.00 0.00 2.10
1918 2054 4.285003 TCCCTCCGTCTCAAAATGTCTTAA 59.715 41.667 0.00 0.00 0.00 1.85
1919 2055 4.631813 CCCTCCGTCTCAAAATGTCTTAAG 59.368 45.833 0.00 0.00 0.00 1.85
1920 2056 5.238583 CCTCCGTCTCAAAATGTCTTAAGT 58.761 41.667 1.63 0.00 0.00 2.24
1921 2057 5.701290 CCTCCGTCTCAAAATGTCTTAAGTT 59.299 40.000 1.63 0.00 0.00 2.66
1922 2058 6.204882 CCTCCGTCTCAAAATGTCTTAAGTTT 59.795 38.462 1.63 0.00 0.00 2.66
1923 2059 7.386848 CCTCCGTCTCAAAATGTCTTAAGTTTA 59.613 37.037 1.63 0.00 0.00 2.01
1924 2060 8.306680 TCCGTCTCAAAATGTCTTAAGTTTAG 57.693 34.615 1.63 0.00 0.00 1.85
1925 2061 7.929785 TCCGTCTCAAAATGTCTTAAGTTTAGT 59.070 33.333 1.63 0.00 0.00 2.24
1926 2062 9.199982 CCGTCTCAAAATGTCTTAAGTTTAGTA 57.800 33.333 1.63 0.00 0.00 1.82
1971 2107 9.391006 AGTACAAACTTGAGACACTTATTTTGA 57.609 29.630 0.00 0.00 29.00 2.69
1972 2108 9.997482 GTACAAACTTGAGACACTTATTTTGAA 57.003 29.630 0.00 0.00 0.00 2.69
1974 2110 9.353999 ACAAACTTGAGACACTTATTTTGAAAC 57.646 29.630 0.00 0.00 0.00 2.78
1975 2111 8.523464 CAAACTTGAGACACTTATTTTGAAACG 58.477 33.333 0.00 0.00 0.00 3.60
1976 2112 6.725246 ACTTGAGACACTTATTTTGAAACGG 58.275 36.000 0.00 0.00 0.00 4.44
1977 2113 6.540914 ACTTGAGACACTTATTTTGAAACGGA 59.459 34.615 0.00 0.00 0.00 4.69
1978 2114 6.928979 TGAGACACTTATTTTGAAACGGAA 57.071 33.333 0.00 0.00 0.00 4.30
1979 2115 6.954944 TGAGACACTTATTTTGAAACGGAAG 58.045 36.000 0.00 0.00 0.00 3.46
1980 2116 6.017440 TGAGACACTTATTTTGAAACGGAAGG 60.017 38.462 0.00 0.00 0.00 3.46
1981 2117 6.059484 AGACACTTATTTTGAAACGGAAGGA 58.941 36.000 0.00 0.00 0.00 3.36
1982 2118 6.204882 AGACACTTATTTTGAAACGGAAGGAG 59.795 38.462 0.00 0.00 0.00 3.69
1983 2119 5.826208 ACACTTATTTTGAAACGGAAGGAGT 59.174 36.000 0.00 0.00 0.00 3.85
1984 2120 6.993902 ACACTTATTTTGAAACGGAAGGAGTA 59.006 34.615 0.00 0.00 0.00 2.59
1985 2121 7.041576 ACACTTATTTTGAAACGGAAGGAGTAC 60.042 37.037 0.00 0.00 0.00 2.73
1986 2122 6.993902 ACTTATTTTGAAACGGAAGGAGTACA 59.006 34.615 0.00 0.00 0.00 2.90
1987 2123 7.664318 ACTTATTTTGAAACGGAAGGAGTACAT 59.336 33.333 0.00 0.00 0.00 2.29
1988 2124 9.158233 CTTATTTTGAAACGGAAGGAGTACATA 57.842 33.333 0.00 0.00 0.00 2.29
1989 2125 7.989416 ATTTTGAAACGGAAGGAGTACATAA 57.011 32.000 0.00 0.00 0.00 1.90
1990 2126 7.989416 TTTTGAAACGGAAGGAGTACATAAT 57.011 32.000 0.00 0.00 0.00 1.28
1991 2127 9.675464 ATTTTGAAACGGAAGGAGTACATAATA 57.325 29.630 0.00 0.00 0.00 0.98
1992 2128 9.504708 TTTTGAAACGGAAGGAGTACATAATAA 57.495 29.630 0.00 0.00 0.00 1.40
2063 2203 2.356125 CGATTTCTCATCTGGTTGGGGT 60.356 50.000 0.00 0.00 0.00 4.95
2064 2204 2.879103 TTTCTCATCTGGTTGGGGTC 57.121 50.000 0.00 0.00 0.00 4.46
2065 2205 2.044793 TTCTCATCTGGTTGGGGTCT 57.955 50.000 0.00 0.00 0.00 3.85
2066 2206 2.044793 TCTCATCTGGTTGGGGTCTT 57.955 50.000 0.00 0.00 0.00 3.01
2067 2207 1.630369 TCTCATCTGGTTGGGGTCTTG 59.370 52.381 0.00 0.00 0.00 3.02
2068 2208 0.698238 TCATCTGGTTGGGGTCTTGG 59.302 55.000 0.00 0.00 0.00 3.61
2070 2210 1.509548 ATCTGGTTGGGGTCTTGGGG 61.510 60.000 0.00 0.00 0.00 4.96
2071 2211 2.038221 TGGTTGGGGTCTTGGGGA 60.038 61.111 0.00 0.00 0.00 4.81
2072 2212 1.467190 TGGTTGGGGTCTTGGGGAT 60.467 57.895 0.00 0.00 0.00 3.85
2073 2213 0.178828 TGGTTGGGGTCTTGGGGATA 60.179 55.000 0.00 0.00 0.00 2.59
2074 2214 0.257905 GGTTGGGGTCTTGGGGATAC 59.742 60.000 0.00 0.00 0.00 2.24
2075 2215 0.996583 GTTGGGGTCTTGGGGATACA 59.003 55.000 0.00 0.00 39.74 2.29
2076 2216 1.569072 GTTGGGGTCTTGGGGATACAT 59.431 52.381 0.00 0.00 39.74 2.29
2077 2217 1.221635 TGGGGTCTTGGGGATACATG 58.778 55.000 0.00 0.00 39.74 3.21
2078 2218 1.222567 GGGGTCTTGGGGATACATGT 58.777 55.000 2.69 2.69 39.74 3.21
2079 2219 1.133792 GGGGTCTTGGGGATACATGTG 60.134 57.143 9.11 0.00 39.74 3.21
2080 2220 1.843851 GGGTCTTGGGGATACATGTGA 59.156 52.381 9.11 0.00 39.74 3.58
2081 2221 2.158755 GGGTCTTGGGGATACATGTGAG 60.159 54.545 9.11 0.00 39.74 3.51
2082 2222 2.771943 GGTCTTGGGGATACATGTGAGA 59.228 50.000 9.11 0.00 39.74 3.27
2092 2232 4.502259 GGATACATGTGAGAAGAGGCGAAT 60.502 45.833 9.11 0.00 0.00 3.34
2227 2376 4.009675 AGTGATTCGGATGCTGCTAAAAA 58.990 39.130 0.00 0.00 0.00 1.94
2228 2377 4.641989 AGTGATTCGGATGCTGCTAAAAAT 59.358 37.500 0.00 0.00 0.00 1.82
2229 2378 4.736793 GTGATTCGGATGCTGCTAAAAATG 59.263 41.667 0.00 0.00 0.00 2.32
2231 2380 4.782019 TTCGGATGCTGCTAAAAATGTT 57.218 36.364 0.00 0.00 0.00 2.71
2232 2381 4.095410 TCGGATGCTGCTAAAAATGTTG 57.905 40.909 0.00 0.00 0.00 3.33
2233 2382 3.505680 TCGGATGCTGCTAAAAATGTTGT 59.494 39.130 0.00 0.00 0.00 3.32
2234 2383 4.022416 TCGGATGCTGCTAAAAATGTTGTT 60.022 37.500 0.00 0.00 0.00 2.83
2235 2384 5.182190 TCGGATGCTGCTAAAAATGTTGTTA 59.818 36.000 0.00 0.00 0.00 2.41
2236 2385 5.512788 CGGATGCTGCTAAAAATGTTGTTAG 59.487 40.000 0.00 0.00 0.00 2.34
2239 2388 8.026607 GGATGCTGCTAAAAATGTTGTTAGTTA 58.973 33.333 0.00 0.00 31.24 2.24
2240 2389 8.742554 ATGCTGCTAAAAATGTTGTTAGTTAC 57.257 30.769 0.00 0.00 31.24 2.50
2241 2390 7.936584 TGCTGCTAAAAATGTTGTTAGTTACT 58.063 30.769 0.00 0.00 31.24 2.24
2242 2391 8.073768 TGCTGCTAAAAATGTTGTTAGTTACTC 58.926 33.333 0.00 0.00 31.24 2.59
2243 2392 7.537649 GCTGCTAAAAATGTTGTTAGTTACTCC 59.462 37.037 4.98 0.00 31.24 3.85
2244 2393 7.878036 TGCTAAAAATGTTGTTAGTTACTCCC 58.122 34.615 4.98 0.00 31.24 4.30
2245 2394 7.722285 TGCTAAAAATGTTGTTAGTTACTCCCT 59.278 33.333 4.98 0.00 31.24 4.20
2246 2395 8.235226 GCTAAAAATGTTGTTAGTTACTCCCTC 58.765 37.037 4.98 0.00 31.24 4.30
2247 2396 7.520451 AAAAATGTTGTTAGTTACTCCCTCC 57.480 36.000 0.00 0.00 0.00 4.30
2248 2397 3.947910 TGTTGTTAGTTACTCCCTCCG 57.052 47.619 0.00 0.00 0.00 4.63
2249 2398 3.233507 TGTTGTTAGTTACTCCCTCCGT 58.766 45.455 0.00 0.00 0.00 4.69
2250 2399 3.642848 TGTTGTTAGTTACTCCCTCCGTT 59.357 43.478 0.00 0.00 0.00 4.44
2251 2400 4.832266 TGTTGTTAGTTACTCCCTCCGTTA 59.168 41.667 0.00 0.00 0.00 3.18
2252 2401 5.481473 TGTTGTTAGTTACTCCCTCCGTTAT 59.519 40.000 0.00 0.00 0.00 1.89
2253 2402 5.841957 TGTTAGTTACTCCCTCCGTTATC 57.158 43.478 0.00 0.00 0.00 1.75
2254 2403 5.263599 TGTTAGTTACTCCCTCCGTTATCA 58.736 41.667 0.00 0.00 0.00 2.15
2255 2404 5.716228 TGTTAGTTACTCCCTCCGTTATCAA 59.284 40.000 0.00 0.00 0.00 2.57
2256 2405 6.211184 TGTTAGTTACTCCCTCCGTTATCAAA 59.789 38.462 0.00 0.00 0.00 2.69
2257 2406 5.952347 AGTTACTCCCTCCGTTATCAAAT 57.048 39.130 0.00 0.00 0.00 2.32
2258 2407 8.416329 GTTAGTTACTCCCTCCGTTATCAAATA 58.584 37.037 0.00 0.00 0.00 1.40
2259 2408 6.814043 AGTTACTCCCTCCGTTATCAAATAC 58.186 40.000 0.00 0.00 0.00 1.89
2260 2409 6.610425 AGTTACTCCCTCCGTTATCAAATACT 59.390 38.462 0.00 0.00 0.00 2.12
2261 2410 5.532664 ACTCCCTCCGTTATCAAATACTC 57.467 43.478 0.00 0.00 0.00 2.59
2262 2411 4.344390 ACTCCCTCCGTTATCAAATACTCC 59.656 45.833 0.00 0.00 0.00 3.85
2263 2412 3.644738 TCCCTCCGTTATCAAATACTCCC 59.355 47.826 0.00 0.00 0.00 4.30
2264 2413 3.646637 CCCTCCGTTATCAAATACTCCCT 59.353 47.826 0.00 0.00 0.00 4.20
2265 2414 4.262506 CCCTCCGTTATCAAATACTCCCTC 60.263 50.000 0.00 0.00 0.00 4.30
2266 2415 4.262506 CCTCCGTTATCAAATACTCCCTCC 60.263 50.000 0.00 0.00 0.00 4.30
2267 2416 3.319972 TCCGTTATCAAATACTCCCTCCG 59.680 47.826 0.00 0.00 0.00 4.63
2268 2417 3.069158 CCGTTATCAAATACTCCCTCCGT 59.931 47.826 0.00 0.00 0.00 4.69
2269 2418 4.296690 CGTTATCAAATACTCCCTCCGTC 58.703 47.826 0.00 0.00 0.00 4.79
2270 2419 4.629092 GTTATCAAATACTCCCTCCGTCC 58.371 47.826 0.00 0.00 0.00 4.79
2271 2420 1.108776 TCAAATACTCCCTCCGTCCG 58.891 55.000 0.00 0.00 0.00 4.79
2272 2421 0.104304 CAAATACTCCCTCCGTCCGG 59.896 60.000 0.00 0.00 0.00 5.14
2273 2422 0.032813 AAATACTCCCTCCGTCCGGA 60.033 55.000 0.00 0.00 42.90 5.14
2274 2423 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
2275 2424 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
2276 2425 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2277 2426 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
2278 2427 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2279 2428 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2280 2429 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2281 2430 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2282 2431 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2283 2432 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2284 2433 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
2285 2434 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
2286 2435 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
2287 2436 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
2288 2437 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
2289 2438 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
2290 2439 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
2291 2440 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
2292 2441 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
2293 2442 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
2294 2443 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
2295 2444 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
2303 2452 8.096414 ACTTGTCATCAAAATGAATAAAAGGGG 58.904 33.333 0.00 0.00 43.42 4.79
2304 2453 7.789202 TGTCATCAAAATGAATAAAAGGGGA 57.211 32.000 0.00 0.00 43.42 4.81
2305 2454 8.378115 TGTCATCAAAATGAATAAAAGGGGAT 57.622 30.769 0.00 0.00 43.42 3.85
2306 2455 8.259411 TGTCATCAAAATGAATAAAAGGGGATG 58.741 33.333 0.00 0.00 43.42 3.51
2307 2456 8.260114 GTCATCAAAATGAATAAAAGGGGATGT 58.740 33.333 0.00 0.00 43.42 3.06
2308 2457 9.486123 TCATCAAAATGAATAAAAGGGGATGTA 57.514 29.630 0.00 0.00 38.97 2.29
2311 2460 9.713684 TCAAAATGAATAAAAGGGGATGTATCT 57.286 29.630 0.00 0.00 0.00 1.98
2317 2466 9.170890 TGAATAAAAGGGGATGTATCTAGATGT 57.829 33.333 15.79 1.25 0.00 3.06
2325 2474 9.845214 AGGGGATGTATCTAGATGTATTTTAGT 57.155 33.333 15.79 0.00 0.00 2.24
2359 2508 8.814931 ACATCCTTTTTATCCATTTTGATGACA 58.185 29.630 0.00 0.00 33.22 3.58
2360 2509 9.656040 CATCCTTTTTATCCATTTTGATGACAA 57.344 29.630 0.00 0.00 31.12 3.18
2361 2510 9.880157 ATCCTTTTTATCCATTTTGATGACAAG 57.120 29.630 0.00 0.00 37.32 3.16
2362 2511 8.869109 TCCTTTTTATCCATTTTGATGACAAGT 58.131 29.630 0.00 0.00 37.32 3.16
2369 2518 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
2370 2519 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
2371 2520 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
2372 2521 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
2373 2522 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
2374 2523 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
2375 2524 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
2376 2525 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
2377 2526 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2378 2527 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2379 2528 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
2380 2529 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
2381 2530 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
2382 2531 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
2383 2532 1.180029 TTTTCGGACGGAGGGAGTAG 58.820 55.000 0.00 0.00 0.00 2.57
2384 2533 0.038744 TTTCGGACGGAGGGAGTAGT 59.961 55.000 0.00 0.00 0.00 2.73
2385 2534 0.911769 TTCGGACGGAGGGAGTAGTA 59.088 55.000 0.00 0.00 0.00 1.82
2386 2535 1.135094 TCGGACGGAGGGAGTAGTAT 58.865 55.000 0.00 0.00 0.00 2.12
2387 2536 1.492176 TCGGACGGAGGGAGTAGTATT 59.508 52.381 0.00 0.00 0.00 1.89
2388 2537 2.092212 TCGGACGGAGGGAGTAGTATTT 60.092 50.000 0.00 0.00 0.00 1.40
2389 2538 2.034305 CGGACGGAGGGAGTAGTATTTG 59.966 54.545 0.00 0.00 0.00 2.32
2390 2539 3.029570 GGACGGAGGGAGTAGTATTTGT 58.970 50.000 0.00 0.00 0.00 2.83
2391 2540 3.067883 GGACGGAGGGAGTAGTATTTGTC 59.932 52.174 0.00 0.00 0.00 3.18
2392 2541 3.952967 GACGGAGGGAGTAGTATTTGTCT 59.047 47.826 0.00 0.00 0.00 3.41
2393 2542 4.351127 ACGGAGGGAGTAGTATTTGTCTT 58.649 43.478 0.00 0.00 0.00 3.01
2394 2543 4.776308 ACGGAGGGAGTAGTATTTGTCTTT 59.224 41.667 0.00 0.00 0.00 2.52
2395 2544 5.105432 ACGGAGGGAGTAGTATTTGTCTTTC 60.105 44.000 0.00 0.00 0.00 2.62
2396 2545 5.127356 CGGAGGGAGTAGTATTTGTCTTTCT 59.873 44.000 0.00 0.00 0.00 2.52
2397 2546 6.320672 CGGAGGGAGTAGTATTTGTCTTTCTA 59.679 42.308 0.00 0.00 0.00 2.10
2398 2547 7.468906 CGGAGGGAGTAGTATTTGTCTTTCTAG 60.469 44.444 0.00 0.00 0.00 2.43
2399 2548 7.560626 GGAGGGAGTAGTATTTGTCTTTCTAGA 59.439 40.741 0.00 0.00 0.00 2.43
2400 2549 9.138596 GAGGGAGTAGTATTTGTCTTTCTAGAT 57.861 37.037 0.00 0.00 31.86 1.98
2427 2576 9.840427 ATTACAACAAATGACTACATACAAAGC 57.160 29.630 0.00 0.00 35.50 3.51
2428 2577 7.270757 ACAACAAATGACTACATACAAAGCA 57.729 32.000 0.00 0.00 35.50 3.91
2429 2578 7.711846 ACAACAAATGACTACATACAAAGCAA 58.288 30.769 0.00 0.00 35.50 3.91
2430 2579 8.194104 ACAACAAATGACTACATACAAAGCAAA 58.806 29.630 0.00 0.00 35.50 3.68
2431 2580 9.029243 CAACAAATGACTACATACAAAGCAAAA 57.971 29.630 0.00 0.00 35.50 2.44
2432 2581 9.762933 AACAAATGACTACATACAAAGCAAAAT 57.237 25.926 0.00 0.00 35.50 1.82
2437 2586 8.942669 TGACTACATACAAAGCAAAATAAACG 57.057 30.769 0.00 0.00 0.00 3.60
2438 2587 8.775527 TGACTACATACAAAGCAAAATAAACGA 58.224 29.630 0.00 0.00 0.00 3.85
2439 2588 9.601971 GACTACATACAAAGCAAAATAAACGAA 57.398 29.630 0.00 0.00 0.00 3.85
2442 2591 8.810652 ACATACAAAGCAAAATAAACGAATGT 57.189 26.923 0.00 0.00 0.00 2.71
2443 2592 9.900710 ACATACAAAGCAAAATAAACGAATGTA 57.099 25.926 0.00 0.00 0.00 2.29
2445 2594 9.900710 ATACAAAGCAAAATAAACGAATGTACA 57.099 25.926 0.00 0.00 0.00 2.90
2446 2595 8.810652 ACAAAGCAAAATAAACGAATGTACAT 57.189 26.923 1.41 1.41 0.00 2.29
2447 2596 9.255304 ACAAAGCAAAATAAACGAATGTACATT 57.745 25.926 20.93 20.93 0.00 2.71
2448 2597 9.726034 CAAAGCAAAATAAACGAATGTACATTC 57.274 29.630 30.59 30.59 42.76 2.67
2449 2598 9.691362 AAAGCAAAATAAACGAATGTACATTCT 57.309 25.926 34.33 23.52 43.71 2.40
2489 2638 7.994425 ACATCTGTATGTTGTAACCATTTGA 57.006 32.000 0.00 0.00 44.07 2.69
2490 2639 8.402798 ACATCTGTATGTTGTAACCATTTGAA 57.597 30.769 0.00 0.00 44.07 2.69
2491 2640 8.855110 ACATCTGTATGTTGTAACCATTTGAAA 58.145 29.630 0.00 0.00 44.07 2.69
2492 2641 9.859427 CATCTGTATGTTGTAACCATTTGAAAT 57.141 29.630 0.00 0.00 0.00 2.17
2493 2642 9.859427 ATCTGTATGTTGTAACCATTTGAAATG 57.141 29.630 10.84 10.84 0.00 2.32
2494 2643 8.855110 TCTGTATGTTGTAACCATTTGAAATGT 58.145 29.630 15.93 2.12 0.00 2.71
2506 2655 9.739276 AACCATTTGAAATGTATAGAGAGACAA 57.261 29.630 15.93 0.00 28.79 3.18
2507 2656 9.739276 ACCATTTGAAATGTATAGAGAGACAAA 57.261 29.630 15.93 0.00 28.79 2.83
2518 2667 9.832445 TGTATAGAGAGACAAATATTTGGGAAC 57.168 33.333 27.43 16.80 42.34 3.62
2519 2668 8.979574 GTATAGAGAGACAAATATTTGGGAACG 58.020 37.037 27.43 6.31 42.34 3.95
2520 2669 5.186198 AGAGAGACAAATATTTGGGAACGG 58.814 41.667 27.43 5.66 42.34 4.44
2521 2670 5.045869 AGAGAGACAAATATTTGGGAACGGA 60.046 40.000 27.43 0.00 42.34 4.69
2522 2671 5.186198 AGAGACAAATATTTGGGAACGGAG 58.814 41.667 27.43 4.34 42.34 4.63
2523 2672 4.270008 AGACAAATATTTGGGAACGGAGG 58.730 43.478 27.43 3.68 42.34 4.30
2524 2673 3.361786 ACAAATATTTGGGAACGGAGGG 58.638 45.455 27.43 3.22 42.34 4.30
2525 2674 3.010808 ACAAATATTTGGGAACGGAGGGA 59.989 43.478 27.43 0.00 42.34 4.20
2526 2675 3.577805 AATATTTGGGAACGGAGGGAG 57.422 47.619 0.00 0.00 0.00 4.30
2538 2687 2.037511 ACGGAGGGAGTAGTAGAGATCG 59.962 54.545 0.00 0.00 0.00 3.69
2581 2730 2.136298 TCTGTTTGTTGTTGCTCCCA 57.864 45.000 0.00 0.00 0.00 4.37
2615 2764 0.598680 GTTGGAGGCAGGATCGATCG 60.599 60.000 18.81 9.36 0.00 3.69
2616 2765 1.043116 TTGGAGGCAGGATCGATCGT 61.043 55.000 18.81 16.75 0.00 3.73
2675 2824 6.155221 ACTTTAGGATCTTGTGTAGAGCATCA 59.845 38.462 0.00 0.00 41.13 3.07
2676 2825 6.737720 TTAGGATCTTGTGTAGAGCATCAT 57.262 37.500 0.00 0.00 41.13 2.45
2708 2857 4.770531 TCTTGTCTAGGATTCTCCAAACGA 59.229 41.667 0.00 0.00 39.61 3.85
2733 2882 3.006940 TCATGGTTAGCCGTTTTGCTAG 58.993 45.455 0.00 0.00 44.18 3.42
2734 2883 1.816074 TGGTTAGCCGTTTTGCTAGG 58.184 50.000 0.00 0.00 44.18 3.02
2735 2884 1.072648 TGGTTAGCCGTTTTGCTAGGT 59.927 47.619 0.00 0.00 44.18 3.08
2736 2885 1.467342 GGTTAGCCGTTTTGCTAGGTG 59.533 52.381 0.00 0.00 44.18 4.00
2737 2886 2.419667 GTTAGCCGTTTTGCTAGGTGA 58.580 47.619 0.00 0.00 44.18 4.02
2738 2887 3.007635 GTTAGCCGTTTTGCTAGGTGAT 58.992 45.455 0.00 0.00 44.18 3.06
2739 2888 1.739067 AGCCGTTTTGCTAGGTGATC 58.261 50.000 0.00 0.00 40.56 2.92
2740 2889 1.279271 AGCCGTTTTGCTAGGTGATCT 59.721 47.619 0.00 0.00 40.56 2.75
2741 2890 2.500098 AGCCGTTTTGCTAGGTGATCTA 59.500 45.455 0.00 0.00 40.56 1.98
2742 2891 2.608090 GCCGTTTTGCTAGGTGATCTAC 59.392 50.000 0.00 0.00 0.00 2.59
2743 2892 2.858344 CCGTTTTGCTAGGTGATCTACG 59.142 50.000 0.00 0.00 0.00 3.51
2744 2893 2.858344 CGTTTTGCTAGGTGATCTACGG 59.142 50.000 0.00 0.00 0.00 4.02
2745 2894 3.428452 CGTTTTGCTAGGTGATCTACGGA 60.428 47.826 0.00 0.00 0.00 4.69
2746 2895 4.694339 GTTTTGCTAGGTGATCTACGGAT 58.306 43.478 0.00 0.00 34.45 4.18
2747 2896 4.585955 TTTGCTAGGTGATCTACGGATC 57.414 45.455 0.00 0.00 46.20 3.36
2748 2897 3.510531 TGCTAGGTGATCTACGGATCT 57.489 47.619 7.39 0.00 46.18 2.75
2749 2898 3.149981 TGCTAGGTGATCTACGGATCTG 58.850 50.000 0.00 0.00 46.18 2.90
2750 2899 2.490115 GCTAGGTGATCTACGGATCTGG 59.510 54.545 6.47 0.00 46.18 3.86
2751 2900 3.811098 GCTAGGTGATCTACGGATCTGGA 60.811 52.174 6.47 0.00 46.18 3.86
2752 2901 3.534357 AGGTGATCTACGGATCTGGAT 57.466 47.619 6.47 0.00 46.18 3.41
2753 2902 3.161067 AGGTGATCTACGGATCTGGATG 58.839 50.000 6.47 0.00 46.18 3.51
2754 2903 2.894126 GGTGATCTACGGATCTGGATGT 59.106 50.000 6.47 0.00 46.18 3.06
2755 2904 4.079970 GGTGATCTACGGATCTGGATGTA 58.920 47.826 6.47 0.00 46.18 2.29
2756 2905 4.523173 GGTGATCTACGGATCTGGATGTAA 59.477 45.833 6.47 0.00 46.18 2.41
2757 2906 5.186021 GGTGATCTACGGATCTGGATGTAAT 59.814 44.000 6.47 0.00 46.18 1.89
2758 2907 6.295349 GGTGATCTACGGATCTGGATGTAATT 60.295 42.308 6.47 0.00 46.18 1.40
2759 2908 7.155328 GTGATCTACGGATCTGGATGTAATTT 58.845 38.462 6.47 0.00 46.18 1.82
2760 2909 7.657761 GTGATCTACGGATCTGGATGTAATTTT 59.342 37.037 6.47 0.00 46.18 1.82
2761 2910 8.210946 TGATCTACGGATCTGGATGTAATTTTT 58.789 33.333 6.47 0.00 46.18 1.94
2762 2911 9.706691 GATCTACGGATCTGGATGTAATTTTTA 57.293 33.333 6.47 0.00 43.55 1.52
2767 2916 9.408648 ACGGATCTGGATGTAATTTTTATTTCT 57.591 29.630 6.47 0.00 0.00 2.52
2768 2917 9.669353 CGGATCTGGATGTAATTTTTATTTCTG 57.331 33.333 0.00 0.00 0.00 3.02
2769 2918 9.971922 GGATCTGGATGTAATTTTTATTTCTGG 57.028 33.333 0.00 0.00 0.00 3.86
2784 2933 5.796350 ATTTCTGGTATTCGTTGTACTGC 57.204 39.130 0.00 0.00 0.00 4.40
2785 2934 3.241067 TCTGGTATTCGTTGTACTGCC 57.759 47.619 0.00 0.00 0.00 4.85
2786 2935 2.563620 TCTGGTATTCGTTGTACTGCCA 59.436 45.455 0.00 0.00 0.00 4.92
2787 2936 3.196901 TCTGGTATTCGTTGTACTGCCAT 59.803 43.478 0.00 0.00 0.00 4.40
2788 2937 3.266636 TGGTATTCGTTGTACTGCCATG 58.733 45.455 0.00 0.00 0.00 3.66
2789 2938 3.055747 TGGTATTCGTTGTACTGCCATGA 60.056 43.478 0.00 0.00 0.00 3.07
2790 2939 4.127171 GGTATTCGTTGTACTGCCATGAT 58.873 43.478 0.00 0.00 0.00 2.45
2791 2940 4.574828 GGTATTCGTTGTACTGCCATGATT 59.425 41.667 0.00 0.00 0.00 2.57
2792 2941 4.621068 ATTCGTTGTACTGCCATGATTG 57.379 40.909 0.00 0.00 0.00 2.67
2793 2942 3.326836 TCGTTGTACTGCCATGATTGA 57.673 42.857 0.00 0.00 0.00 2.57
2794 2943 3.669536 TCGTTGTACTGCCATGATTGAA 58.330 40.909 0.00 0.00 0.00 2.69
2795 2944 3.684305 TCGTTGTACTGCCATGATTGAAG 59.316 43.478 0.00 0.00 0.00 3.02
2796 2945 3.684305 CGTTGTACTGCCATGATTGAAGA 59.316 43.478 0.00 0.00 0.00 2.87
2797 2946 4.333649 CGTTGTACTGCCATGATTGAAGAT 59.666 41.667 0.00 0.00 0.00 2.40
2798 2947 5.575957 GTTGTACTGCCATGATTGAAGATG 58.424 41.667 0.00 0.00 0.00 2.90
2799 2948 5.101648 TGTACTGCCATGATTGAAGATGA 57.898 39.130 0.00 0.00 0.00 2.92
2800 2949 5.499313 TGTACTGCCATGATTGAAGATGAA 58.501 37.500 0.00 0.00 0.00 2.57
2801 2950 6.124340 TGTACTGCCATGATTGAAGATGAAT 58.876 36.000 0.00 0.00 0.00 2.57
2802 2951 7.281841 TGTACTGCCATGATTGAAGATGAATA 58.718 34.615 0.00 0.00 0.00 1.75
2803 2952 6.879276 ACTGCCATGATTGAAGATGAATAG 57.121 37.500 0.00 0.00 0.00 1.73
2804 2953 6.598503 ACTGCCATGATTGAAGATGAATAGA 58.401 36.000 0.00 0.00 0.00 1.98
2805 2954 7.232188 ACTGCCATGATTGAAGATGAATAGAT 58.768 34.615 0.00 0.00 0.00 1.98
2806 2955 7.724506 ACTGCCATGATTGAAGATGAATAGATT 59.275 33.333 0.00 0.00 0.00 2.40
2807 2956 7.882179 TGCCATGATTGAAGATGAATAGATTG 58.118 34.615 0.00 0.00 0.00 2.67
2808 2957 7.722285 TGCCATGATTGAAGATGAATAGATTGA 59.278 33.333 0.00 0.00 0.00 2.57
2809 2958 8.573885 GCCATGATTGAAGATGAATAGATTGAA 58.426 33.333 0.00 0.00 0.00 2.69
2819 2968 9.846248 AAGATGAATAGATTGAAAGTTTTTCCG 57.154 29.630 0.00 0.00 0.00 4.30
2820 2969 7.970614 AGATGAATAGATTGAAAGTTTTTCCGC 59.029 33.333 0.00 0.00 0.00 5.54
2821 2970 6.976088 TGAATAGATTGAAAGTTTTTCCGCA 58.024 32.000 0.00 0.00 0.00 5.69
2822 2971 7.429633 TGAATAGATTGAAAGTTTTTCCGCAA 58.570 30.769 0.00 0.00 0.00 4.85
2823 2972 7.923344 TGAATAGATTGAAAGTTTTTCCGCAAA 59.077 29.630 0.00 0.00 0.00 3.68
2824 2973 8.655651 AATAGATTGAAAGTTTTTCCGCAAAA 57.344 26.923 0.00 0.00 31.50 2.44
2825 2974 6.976636 AGATTGAAAGTTTTTCCGCAAAAA 57.023 29.167 0.00 0.00 38.84 1.94
2871 3020 3.575965 AAAATAACTTTCCGCAGCCTG 57.424 42.857 0.00 0.00 0.00 4.85
2872 3021 0.811281 AATAACTTTCCGCAGCCTGC 59.189 50.000 6.63 6.63 40.69 4.85
2873 3022 0.035056 ATAACTTTCCGCAGCCTGCT 60.035 50.000 15.80 0.00 42.25 4.24
2874 3023 0.250727 TAACTTTCCGCAGCCTGCTT 60.251 50.000 15.80 3.44 42.25 3.91
2875 3024 1.518903 AACTTTCCGCAGCCTGCTTC 61.519 55.000 15.80 0.00 42.25 3.86
2876 3025 1.673665 CTTTCCGCAGCCTGCTTCT 60.674 57.895 15.80 0.00 42.25 2.85
2877 3026 1.228245 TTTCCGCAGCCTGCTTCTT 60.228 52.632 15.80 0.00 42.25 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 7.175293 AGGATAGATAGATACGGTGAAGTGAAC 59.825 40.741 0.00 0.00 0.00 3.18
66 71 3.181479 CCATCGATCGTTTACCAGGAAGA 60.181 47.826 15.94 0.00 0.00 2.87
84 93 3.707793 CGCTCCACTAGTTTACTCCATC 58.292 50.000 0.00 0.00 0.00 3.51
109 118 0.249868 TCTTGTCGCCTGTTGTCCTG 60.250 55.000 0.00 0.00 0.00 3.86
111 120 1.228657 GGTCTTGTCGCCTGTTGTCC 61.229 60.000 0.00 0.00 0.00 4.02
148 157 0.235144 ACACTATAGCTAGCGCGTCG 59.765 55.000 9.55 0.26 42.32 5.12
149 158 1.676057 CACACTATAGCTAGCGCGTC 58.324 55.000 9.55 0.00 42.32 5.19
153 162 2.292016 ACAGAGCACACTATAGCTAGCG 59.708 50.000 9.55 0.00 42.04 4.26
429 461 0.904865 CAGCAGTACCCCAGTCCTCA 60.905 60.000 0.00 0.00 0.00 3.86
431 463 0.043334 ATCAGCAGTACCCCAGTCCT 59.957 55.000 0.00 0.00 0.00 3.85
432 464 0.466124 GATCAGCAGTACCCCAGTCC 59.534 60.000 0.00 0.00 0.00 3.85
434 466 0.043334 AGGATCAGCAGTACCCCAGT 59.957 55.000 0.00 0.00 0.00 4.00
435 467 1.207791 AAGGATCAGCAGTACCCCAG 58.792 55.000 0.00 0.00 0.00 4.45
436 468 1.559682 GAAAGGATCAGCAGTACCCCA 59.440 52.381 0.00 0.00 0.00 4.96
437 469 1.840635 AGAAAGGATCAGCAGTACCCC 59.159 52.381 0.00 0.00 0.00 4.95
438 470 2.482142 CGAGAAAGGATCAGCAGTACCC 60.482 54.545 0.00 0.00 0.00 3.69
439 471 2.166664 ACGAGAAAGGATCAGCAGTACC 59.833 50.000 0.00 0.00 0.00 3.34
443 478 1.005340 GCACGAGAAAGGATCAGCAG 58.995 55.000 0.00 0.00 0.00 4.24
482 517 6.040247 TCGCATTTTCATGTACTACGATTCT 58.960 36.000 0.00 0.00 32.28 2.40
483 518 6.198403 TCTCGCATTTTCATGTACTACGATTC 59.802 38.462 0.00 0.00 32.28 2.52
484 519 6.040247 TCTCGCATTTTCATGTACTACGATT 58.960 36.000 0.00 0.00 32.28 3.34
485 520 5.588240 TCTCGCATTTTCATGTACTACGAT 58.412 37.500 0.00 0.00 32.28 3.73
486 521 4.989044 TCTCGCATTTTCATGTACTACGA 58.011 39.130 0.00 0.00 32.28 3.43
487 522 5.288712 ACTTCTCGCATTTTCATGTACTACG 59.711 40.000 0.00 0.00 32.28 3.51
488 523 6.455646 CCACTTCTCGCATTTTCATGTACTAC 60.456 42.308 0.00 0.00 32.28 2.73
489 524 5.580691 CCACTTCTCGCATTTTCATGTACTA 59.419 40.000 0.00 0.00 32.28 1.82
588 647 1.558756 CCTCCTCCTGCTCATTCAAGT 59.441 52.381 0.00 0.00 0.00 3.16
600 659 0.415429 TTGCTTCTCCTCCTCCTCCT 59.585 55.000 0.00 0.00 0.00 3.69
664 726 0.768221 GCCCCCATGTCTATCCTCCA 60.768 60.000 0.00 0.00 0.00 3.86
736 798 2.173382 CAAAGCCGCTTTCGTCCG 59.827 61.111 15.60 0.68 30.60 4.79
738 800 2.499732 CGCAAAGCCGCTTTCGTC 60.500 61.111 15.60 7.20 30.60 4.20
780 843 1.474498 CGGATAAAGAAACCTCCCGGG 60.474 57.143 16.85 16.85 41.89 5.73
781 844 1.949465 CGGATAAAGAAACCTCCCGG 58.051 55.000 0.00 0.00 32.64 5.73
803 867 1.359848 GAACATGTGGTCTTCGCGAT 58.640 50.000 10.88 0.00 0.00 4.58
939 1008 0.540923 GCTCCTCTGCTCTGTTGGAT 59.459 55.000 0.00 0.00 0.00 3.41
940 1009 1.881903 CGCTCCTCTGCTCTGTTGGA 61.882 60.000 0.00 0.00 0.00 3.53
941 1010 1.447489 CGCTCCTCTGCTCTGTTGG 60.447 63.158 0.00 0.00 0.00 3.77
942 1011 0.735632 GTCGCTCCTCTGCTCTGTTG 60.736 60.000 0.00 0.00 0.00 3.33
943 1012 1.589113 GTCGCTCCTCTGCTCTGTT 59.411 57.895 0.00 0.00 0.00 3.16
944 1013 2.347322 GGTCGCTCCTCTGCTCTGT 61.347 63.158 0.00 0.00 0.00 3.41
993 1065 1.134936 TGGTGGTAATCCATGTCGACG 60.135 52.381 11.62 0.00 46.20 5.12
1017 1101 4.193893 TGGTGCTGCTGCTGGTGT 62.194 61.111 17.00 0.00 40.48 4.16
1020 1104 2.596631 AACTGGTGCTGCTGCTGG 60.597 61.111 17.00 6.62 40.48 4.85
1021 1105 2.623915 GGAACTGGTGCTGCTGCTG 61.624 63.158 17.00 0.77 40.48 4.41
1022 1106 2.282040 GGAACTGGTGCTGCTGCT 60.282 61.111 17.00 0.00 40.48 4.24
1023 1107 2.282040 AGGAACTGGTGCTGCTGC 60.282 61.111 8.89 8.89 37.18 5.25
1104 1188 1.914798 TCCATGTCCATGTCCATGTCA 59.085 47.619 16.31 5.88 37.37 3.58
1113 1227 1.434622 GCTGCTCGTCCATGTCCATG 61.435 60.000 0.14 0.14 38.51 3.66
1119 1233 2.747822 GCACAGCTGCTCGTCCATG 61.748 63.158 15.27 2.68 40.63 3.66
1209 1323 0.321671 CGTGGAACATGGACTCCAGT 59.678 55.000 12.32 0.00 42.41 4.00
1419 1533 4.882396 GCGAGGGCGAGCTTCTCC 62.882 72.222 11.11 0.00 40.82 3.71
1486 1615 4.130286 AGCAGCTGGATCAAGTAAGTAC 57.870 45.455 17.12 0.00 0.00 2.73
1487 1616 5.422331 AGTTAGCAGCTGGATCAAGTAAGTA 59.578 40.000 17.12 0.00 0.00 2.24
1488 1617 4.223923 AGTTAGCAGCTGGATCAAGTAAGT 59.776 41.667 17.12 0.00 0.00 2.24
1489 1618 4.569966 CAGTTAGCAGCTGGATCAAGTAAG 59.430 45.833 17.12 0.00 0.00 2.34
1490 1619 4.507710 CAGTTAGCAGCTGGATCAAGTAA 58.492 43.478 17.12 0.00 0.00 2.24
1634 1770 3.749064 TCGTCGTCCAGCTCCTGC 61.749 66.667 0.00 0.00 40.05 4.85
1747 1883 2.114625 ACTCCGACTCCACCGACA 59.885 61.111 0.00 0.00 0.00 4.35
1760 1896 3.628280 GAGGTGGTCGTCGCACTCC 62.628 68.421 3.52 2.02 0.00 3.85
1885 2021 3.713248 TGAGACGGAGGGAGTATACACTA 59.287 47.826 5.50 0.00 34.21 2.74
1889 2025 4.996788 TTTTGAGACGGAGGGAGTATAC 57.003 45.455 0.00 0.00 0.00 1.47
1890 2026 4.960469 ACATTTTGAGACGGAGGGAGTATA 59.040 41.667 0.00 0.00 0.00 1.47
1891 2027 3.775316 ACATTTTGAGACGGAGGGAGTAT 59.225 43.478 0.00 0.00 0.00 2.12
1892 2028 3.170717 ACATTTTGAGACGGAGGGAGTA 58.829 45.455 0.00 0.00 0.00 2.59
1893 2029 1.978580 ACATTTTGAGACGGAGGGAGT 59.021 47.619 0.00 0.00 0.00 3.85
1894 2030 2.234908 AGACATTTTGAGACGGAGGGAG 59.765 50.000 0.00 0.00 0.00 4.30
1896 2032 2.770164 AGACATTTTGAGACGGAGGG 57.230 50.000 0.00 0.00 0.00 4.30
1898 2034 6.787085 AACTTAAGACATTTTGAGACGGAG 57.213 37.500 10.09 0.00 0.00 4.63
1900 2036 8.084590 ACTAAACTTAAGACATTTTGAGACGG 57.915 34.615 10.09 0.00 0.00 4.79
1945 2081 9.391006 TCAAAATAAGTGTCTCAAGTTTGTACT 57.609 29.630 0.00 0.00 35.68 2.73
1946 2082 9.997482 TTCAAAATAAGTGTCTCAAGTTTGTAC 57.003 29.630 0.00 0.00 0.00 2.90
1948 2084 9.353999 GTTTCAAAATAAGTGTCTCAAGTTTGT 57.646 29.630 0.00 0.00 0.00 2.83
1949 2085 8.523464 CGTTTCAAAATAAGTGTCTCAAGTTTG 58.477 33.333 0.00 0.00 0.00 2.93
1950 2086 7.700656 CCGTTTCAAAATAAGTGTCTCAAGTTT 59.299 33.333 0.00 0.00 0.00 2.66
1951 2087 7.066525 TCCGTTTCAAAATAAGTGTCTCAAGTT 59.933 33.333 0.00 0.00 0.00 2.66
1952 2088 6.540914 TCCGTTTCAAAATAAGTGTCTCAAGT 59.459 34.615 0.00 0.00 0.00 3.16
1953 2089 6.954944 TCCGTTTCAAAATAAGTGTCTCAAG 58.045 36.000 0.00 0.00 0.00 3.02
1954 2090 6.928979 TCCGTTTCAAAATAAGTGTCTCAA 57.071 33.333 0.00 0.00 0.00 3.02
1955 2091 6.017440 CCTTCCGTTTCAAAATAAGTGTCTCA 60.017 38.462 0.00 0.00 0.00 3.27
1956 2092 6.204108 TCCTTCCGTTTCAAAATAAGTGTCTC 59.796 38.462 0.00 0.00 0.00 3.36
1957 2093 6.059484 TCCTTCCGTTTCAAAATAAGTGTCT 58.941 36.000 0.00 0.00 0.00 3.41
1958 2094 6.017357 ACTCCTTCCGTTTCAAAATAAGTGTC 60.017 38.462 0.00 0.00 0.00 3.67
1959 2095 5.826208 ACTCCTTCCGTTTCAAAATAAGTGT 59.174 36.000 0.00 0.00 0.00 3.55
1960 2096 6.313744 ACTCCTTCCGTTTCAAAATAAGTG 57.686 37.500 0.00 0.00 0.00 3.16
1961 2097 6.993902 TGTACTCCTTCCGTTTCAAAATAAGT 59.006 34.615 0.00 0.00 0.00 2.24
1962 2098 7.429636 TGTACTCCTTCCGTTTCAAAATAAG 57.570 36.000 0.00 0.00 0.00 1.73
1963 2099 7.989416 ATGTACTCCTTCCGTTTCAAAATAA 57.011 32.000 0.00 0.00 0.00 1.40
1964 2100 9.675464 ATTATGTACTCCTTCCGTTTCAAAATA 57.325 29.630 0.00 0.00 0.00 1.40
1965 2101 7.989416 TTATGTACTCCTTCCGTTTCAAAAT 57.011 32.000 0.00 0.00 0.00 1.82
1966 2102 7.989416 ATTATGTACTCCTTCCGTTTCAAAA 57.011 32.000 0.00 0.00 0.00 2.44
1967 2103 8.938906 GTTATTATGTACTCCTTCCGTTTCAAA 58.061 33.333 0.00 0.00 0.00 2.69
1968 2104 7.550196 GGTTATTATGTACTCCTTCCGTTTCAA 59.450 37.037 0.00 0.00 0.00 2.69
1969 2105 7.043565 GGTTATTATGTACTCCTTCCGTTTCA 58.956 38.462 0.00 0.00 0.00 2.69
1970 2106 7.010830 GTGGTTATTATGTACTCCTTCCGTTTC 59.989 40.741 0.00 0.00 0.00 2.78
1971 2107 6.820152 GTGGTTATTATGTACTCCTTCCGTTT 59.180 38.462 0.00 0.00 0.00 3.60
1972 2108 6.343703 GTGGTTATTATGTACTCCTTCCGTT 58.656 40.000 0.00 0.00 0.00 4.44
1973 2109 5.450965 CGTGGTTATTATGTACTCCTTCCGT 60.451 44.000 0.00 0.00 0.00 4.69
1974 2110 4.980434 CGTGGTTATTATGTACTCCTTCCG 59.020 45.833 0.00 0.00 0.00 4.30
1975 2111 5.910614 ACGTGGTTATTATGTACTCCTTCC 58.089 41.667 0.00 0.00 0.00 3.46
1976 2112 7.144000 CCTACGTGGTTATTATGTACTCCTTC 58.856 42.308 0.00 0.00 0.00 3.46
1977 2113 6.462067 GCCTACGTGGTTATTATGTACTCCTT 60.462 42.308 0.00 0.00 38.35 3.36
1978 2114 5.010415 GCCTACGTGGTTATTATGTACTCCT 59.990 44.000 0.00 0.00 38.35 3.69
1979 2115 5.225642 GCCTACGTGGTTATTATGTACTCC 58.774 45.833 0.00 0.00 38.35 3.85
1980 2116 4.913924 CGCCTACGTGGTTATTATGTACTC 59.086 45.833 0.00 0.00 38.35 2.59
1981 2117 4.261741 CCGCCTACGTGGTTATTATGTACT 60.262 45.833 0.00 0.00 38.35 2.73
1982 2118 3.983344 CCGCCTACGTGGTTATTATGTAC 59.017 47.826 0.00 0.00 38.35 2.90
1983 2119 3.552684 GCCGCCTACGTGGTTATTATGTA 60.553 47.826 0.00 0.00 42.12 2.29
1984 2120 2.804212 GCCGCCTACGTGGTTATTATGT 60.804 50.000 0.00 0.00 42.12 2.29
1985 2121 1.796459 GCCGCCTACGTGGTTATTATG 59.204 52.381 0.00 0.00 42.12 1.90
1986 2122 1.690352 AGCCGCCTACGTGGTTATTAT 59.310 47.619 0.00 0.00 42.12 1.28
1987 2123 1.113788 AGCCGCCTACGTGGTTATTA 58.886 50.000 0.00 0.00 42.12 0.98
1988 2124 0.251073 AAGCCGCCTACGTGGTTATT 59.749 50.000 0.00 0.00 42.12 1.40
1989 2125 0.461339 CAAGCCGCCTACGTGGTTAT 60.461 55.000 0.00 0.00 42.12 1.89
1990 2126 1.079681 CAAGCCGCCTACGTGGTTA 60.080 57.895 0.00 0.00 42.12 2.85
1991 2127 2.358247 CAAGCCGCCTACGTGGTT 60.358 61.111 0.00 0.00 42.12 3.67
1992 2128 3.622826 ACAAGCCGCCTACGTGGT 61.623 61.111 0.00 0.00 42.12 4.16
2063 2203 4.361783 TCTTCTCACATGTATCCCCAAGA 58.638 43.478 0.00 0.00 0.00 3.02
2064 2204 4.444022 CCTCTTCTCACATGTATCCCCAAG 60.444 50.000 0.00 0.00 0.00 3.61
2065 2205 3.455910 CCTCTTCTCACATGTATCCCCAA 59.544 47.826 0.00 0.00 0.00 4.12
2066 2206 3.041211 CCTCTTCTCACATGTATCCCCA 58.959 50.000 0.00 0.00 0.00 4.96
2067 2207 2.224402 GCCTCTTCTCACATGTATCCCC 60.224 54.545 0.00 0.00 0.00 4.81
2068 2208 2.546795 CGCCTCTTCTCACATGTATCCC 60.547 54.545 0.00 0.00 0.00 3.85
2070 2210 3.717400 TCGCCTCTTCTCACATGTATC 57.283 47.619 0.00 0.00 0.00 2.24
2071 2211 4.375272 CATTCGCCTCTTCTCACATGTAT 58.625 43.478 0.00 0.00 0.00 2.29
2072 2212 3.430790 CCATTCGCCTCTTCTCACATGTA 60.431 47.826 0.00 0.00 0.00 2.29
2073 2213 2.625737 CATTCGCCTCTTCTCACATGT 58.374 47.619 0.00 0.00 0.00 3.21
2074 2214 1.938577 CCATTCGCCTCTTCTCACATG 59.061 52.381 0.00 0.00 0.00 3.21
2075 2215 1.134280 CCCATTCGCCTCTTCTCACAT 60.134 52.381 0.00 0.00 0.00 3.21
2076 2216 0.250234 CCCATTCGCCTCTTCTCACA 59.750 55.000 0.00 0.00 0.00 3.58
2077 2217 0.462759 CCCCATTCGCCTCTTCTCAC 60.463 60.000 0.00 0.00 0.00 3.51
2078 2218 0.617535 TCCCCATTCGCCTCTTCTCA 60.618 55.000 0.00 0.00 0.00 3.27
2079 2219 0.179070 GTCCCCATTCGCCTCTTCTC 60.179 60.000 0.00 0.00 0.00 2.87
2080 2220 1.908483 GTCCCCATTCGCCTCTTCT 59.092 57.895 0.00 0.00 0.00 2.85
2081 2221 1.521681 CGTCCCCATTCGCCTCTTC 60.522 63.158 0.00 0.00 0.00 2.87
2082 2222 2.584608 CGTCCCCATTCGCCTCTT 59.415 61.111 0.00 0.00 0.00 2.85
2146 2292 3.923461 CACTTCGGTCACTTCTCTTGATC 59.077 47.826 0.00 0.00 0.00 2.92
2227 2376 3.836562 ACGGAGGGAGTAACTAACAACAT 59.163 43.478 0.00 0.00 0.00 2.71
2228 2377 3.233507 ACGGAGGGAGTAACTAACAACA 58.766 45.455 0.00 0.00 0.00 3.33
2229 2378 3.949842 ACGGAGGGAGTAACTAACAAC 57.050 47.619 0.00 0.00 0.00 3.32
2231 2380 5.263599 TGATAACGGAGGGAGTAACTAACA 58.736 41.667 0.00 0.00 0.00 2.41
2232 2381 5.841957 TGATAACGGAGGGAGTAACTAAC 57.158 43.478 0.00 0.00 0.00 2.34
2233 2382 6.855763 TTTGATAACGGAGGGAGTAACTAA 57.144 37.500 0.00 0.00 0.00 2.24
2234 2383 7.781693 AGTATTTGATAACGGAGGGAGTAACTA 59.218 37.037 0.00 0.00 0.00 2.24
2235 2384 5.952347 ATTTGATAACGGAGGGAGTAACT 57.048 39.130 0.00 0.00 0.00 2.24
2236 2385 6.814043 AGTATTTGATAACGGAGGGAGTAAC 58.186 40.000 0.00 0.00 0.00 2.50
2239 2388 4.344390 GGAGTATTTGATAACGGAGGGAGT 59.656 45.833 0.00 0.00 0.00 3.85
2240 2389 4.262506 GGGAGTATTTGATAACGGAGGGAG 60.263 50.000 0.00 0.00 0.00 4.30
2241 2390 3.644738 GGGAGTATTTGATAACGGAGGGA 59.355 47.826 0.00 0.00 0.00 4.20
2242 2391 3.646637 AGGGAGTATTTGATAACGGAGGG 59.353 47.826 0.00 0.00 0.00 4.30
2243 2392 4.262506 GGAGGGAGTATTTGATAACGGAGG 60.263 50.000 0.00 0.00 0.00 4.30
2244 2393 4.558898 CGGAGGGAGTATTTGATAACGGAG 60.559 50.000 0.00 0.00 0.00 4.63
2245 2394 3.319972 CGGAGGGAGTATTTGATAACGGA 59.680 47.826 0.00 0.00 0.00 4.69
2246 2395 3.069158 ACGGAGGGAGTATTTGATAACGG 59.931 47.826 0.00 0.00 0.00 4.44
2247 2396 4.296690 GACGGAGGGAGTATTTGATAACG 58.703 47.826 0.00 0.00 0.00 3.18
2248 2397 4.629092 GGACGGAGGGAGTATTTGATAAC 58.371 47.826 0.00 0.00 0.00 1.89
2249 2398 3.319972 CGGACGGAGGGAGTATTTGATAA 59.680 47.826 0.00 0.00 0.00 1.75
2250 2399 2.889045 CGGACGGAGGGAGTATTTGATA 59.111 50.000 0.00 0.00 0.00 2.15
2251 2400 1.687123 CGGACGGAGGGAGTATTTGAT 59.313 52.381 0.00 0.00 0.00 2.57
2252 2401 1.108776 CGGACGGAGGGAGTATTTGA 58.891 55.000 0.00 0.00 0.00 2.69
2253 2402 0.104304 CCGGACGGAGGGAGTATTTG 59.896 60.000 4.40 0.00 37.50 2.32
2254 2403 0.032813 TCCGGACGGAGGGAGTATTT 60.033 55.000 9.76 0.00 39.76 1.40
2255 2404 0.032813 TTCCGGACGGAGGGAGTATT 60.033 55.000 13.64 0.00 46.06 1.89
2256 2405 0.032813 TTTCCGGACGGAGGGAGTAT 60.033 55.000 13.64 0.00 46.06 2.12
2257 2406 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
2258 2407 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
2259 2408 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2260 2409 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2261 2410 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2262 2411 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2263 2412 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
2264 2413 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
2265 2414 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
2266 2415 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
2267 2416 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
2268 2417 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
2269 2418 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
2270 2419 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
2277 2426 8.096414 CCCCTTTTATTCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
2278 2427 8.313292 TCCCCTTTTATTCATTTTGATGACAAG 58.687 33.333 0.00 0.00 37.32 3.16
2279 2428 8.200024 TCCCCTTTTATTCATTTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
2280 2429 7.789202 TCCCCTTTTATTCATTTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
2281 2430 8.260114 ACATCCCCTTTTATTCATTTTGATGAC 58.740 33.333 0.00 0.00 32.39 3.06
2282 2431 8.378115 ACATCCCCTTTTATTCATTTTGATGA 57.622 30.769 0.00 0.00 32.39 2.92
2285 2434 9.713684 AGATACATCCCCTTTTATTCATTTTGA 57.286 29.630 0.00 0.00 0.00 2.69
2291 2440 9.170890 ACATCTAGATACATCCCCTTTTATTCA 57.829 33.333 4.54 0.00 0.00 2.57
2299 2448 9.845214 ACTAAAATACATCTAGATACATCCCCT 57.155 33.333 4.54 0.00 0.00 4.79
2333 2482 8.814931 TGTCATCAAAATGGATAAAAAGGATGT 58.185 29.630 0.00 0.00 33.29 3.06
2334 2483 9.656040 TTGTCATCAAAATGGATAAAAAGGATG 57.344 29.630 0.00 0.00 33.42 3.51
2335 2484 9.880157 CTTGTCATCAAAATGGATAAAAAGGAT 57.120 29.630 0.00 0.00 33.42 3.24
2336 2485 8.869109 ACTTGTCATCAAAATGGATAAAAAGGA 58.131 29.630 0.00 0.00 33.42 3.36
2344 2493 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
2345 2494 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
2346 2495 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
2347 2496 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
2348 2497 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
2349 2498 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
2350 2499 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
2351 2500 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
2352 2501 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
2353 2502 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
2354 2503 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
2355 2504 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
2356 2505 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2357 2506 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2358 2507 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2359 2508 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
2360 2509 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
2361 2510 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
2362 2511 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
2363 2512 1.755380 CTACTCCCTCCGTCCGAAAAT 59.245 52.381 0.00 0.00 0.00 1.82
2364 2513 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
2365 2514 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
2366 2515 0.911769 TACTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
2367 2516 1.135094 ATACTACTCCCTCCGTCCGA 58.865 55.000 0.00 0.00 0.00 4.55
2368 2517 1.978454 AATACTACTCCCTCCGTCCG 58.022 55.000 0.00 0.00 0.00 4.79
2369 2518 3.029570 ACAAATACTACTCCCTCCGTCC 58.970 50.000 0.00 0.00 0.00 4.79
2370 2519 3.952967 AGACAAATACTACTCCCTCCGTC 59.047 47.826 0.00 0.00 0.00 4.79
2371 2520 3.978610 AGACAAATACTACTCCCTCCGT 58.021 45.455 0.00 0.00 0.00 4.69
2372 2521 5.127356 AGAAAGACAAATACTACTCCCTCCG 59.873 44.000 0.00 0.00 0.00 4.63
2373 2522 6.547930 AGAAAGACAAATACTACTCCCTCC 57.452 41.667 0.00 0.00 0.00 4.30
2374 2523 8.522542 TCTAGAAAGACAAATACTACTCCCTC 57.477 38.462 0.00 0.00 0.00 4.30
2401 2550 9.840427 GCTTTGTATGTAGTCATTTGTTGTAAT 57.160 29.630 0.00 0.00 35.70 1.89
2402 2551 8.841300 TGCTTTGTATGTAGTCATTTGTTGTAA 58.159 29.630 0.00 0.00 35.70 2.41
2403 2552 8.384607 TGCTTTGTATGTAGTCATTTGTTGTA 57.615 30.769 0.00 0.00 35.70 2.41
2404 2553 7.270757 TGCTTTGTATGTAGTCATTTGTTGT 57.729 32.000 0.00 0.00 35.70 3.32
2405 2554 8.572828 TTTGCTTTGTATGTAGTCATTTGTTG 57.427 30.769 0.00 0.00 35.70 3.33
2406 2555 9.762933 ATTTTGCTTTGTATGTAGTCATTTGTT 57.237 25.926 0.00 0.00 35.70 2.83
2411 2560 9.554724 CGTTTATTTTGCTTTGTATGTAGTCAT 57.445 29.630 0.00 0.00 38.00 3.06
2412 2561 8.775527 TCGTTTATTTTGCTTTGTATGTAGTCA 58.224 29.630 0.00 0.00 0.00 3.41
2413 2562 9.601971 TTCGTTTATTTTGCTTTGTATGTAGTC 57.398 29.630 0.00 0.00 0.00 2.59
2416 2565 9.900710 ACATTCGTTTATTTTGCTTTGTATGTA 57.099 25.926 0.00 0.00 0.00 2.29
2417 2566 8.810652 ACATTCGTTTATTTTGCTTTGTATGT 57.189 26.923 0.00 0.00 0.00 2.29
2419 2568 9.900710 TGTACATTCGTTTATTTTGCTTTGTAT 57.099 25.926 0.00 0.00 0.00 2.29
2420 2569 9.900710 ATGTACATTCGTTTATTTTGCTTTGTA 57.099 25.926 1.41 0.00 0.00 2.41
2421 2570 8.810652 ATGTACATTCGTTTATTTTGCTTTGT 57.189 26.923 1.41 0.00 0.00 2.83
2422 2571 9.726034 GAATGTACATTCGTTTATTTTGCTTTG 57.274 29.630 27.93 0.00 37.97 2.77
2463 2612 9.679661 TCAAATGGTTACAACATACAGATGTAT 57.320 29.630 0.00 0.00 45.93 2.29
2464 2613 9.508642 TTCAAATGGTTACAACATACAGATGTA 57.491 29.630 0.00 0.00 45.93 2.29
2466 2615 9.859427 ATTTCAAATGGTTACAACATACAGATG 57.141 29.630 0.00 0.00 39.16 2.90
2467 2616 9.859427 CATTTCAAATGGTTACAACATACAGAT 57.141 29.630 1.73 0.00 0.00 2.90
2468 2617 8.855110 ACATTTCAAATGGTTACAACATACAGA 58.145 29.630 14.70 0.00 0.00 3.41
2480 2629 9.739276 TTGTCTCTCTATACATTTCAAATGGTT 57.261 29.630 14.70 3.97 0.00 3.67
2481 2630 9.739276 TTTGTCTCTCTATACATTTCAAATGGT 57.261 29.630 14.70 5.43 0.00 3.55
2492 2641 9.832445 GTTCCCAAATATTTGTCTCTCTATACA 57.168 33.333 23.24 0.00 36.45 2.29
2493 2642 8.979574 CGTTCCCAAATATTTGTCTCTCTATAC 58.020 37.037 23.24 9.38 36.45 1.47
2494 2643 8.148351 CCGTTCCCAAATATTTGTCTCTCTATA 58.852 37.037 23.24 0.22 36.45 1.31
2495 2644 6.992715 CCGTTCCCAAATATTTGTCTCTCTAT 59.007 38.462 23.24 0.00 36.45 1.98
2496 2645 6.155565 TCCGTTCCCAAATATTTGTCTCTCTA 59.844 38.462 23.24 5.03 36.45 2.43
2497 2646 5.045869 TCCGTTCCCAAATATTTGTCTCTCT 60.046 40.000 23.24 0.00 36.45 3.10
2498 2647 5.183228 TCCGTTCCCAAATATTTGTCTCTC 58.817 41.667 23.24 10.84 36.45 3.20
2499 2648 5.174037 TCCGTTCCCAAATATTTGTCTCT 57.826 39.130 23.24 0.00 36.45 3.10
2500 2649 4.335594 CCTCCGTTCCCAAATATTTGTCTC 59.664 45.833 23.24 11.68 36.45 3.36
2501 2650 4.270008 CCTCCGTTCCCAAATATTTGTCT 58.730 43.478 23.24 0.00 36.45 3.41
2502 2651 3.380320 CCCTCCGTTCCCAAATATTTGTC 59.620 47.826 23.24 11.68 36.45 3.18
2503 2652 3.010808 TCCCTCCGTTCCCAAATATTTGT 59.989 43.478 23.24 0.00 36.45 2.83
2504 2653 3.626930 TCCCTCCGTTCCCAAATATTTG 58.373 45.455 19.40 19.40 37.90 2.32
2505 2654 3.268595 ACTCCCTCCGTTCCCAAATATTT 59.731 43.478 0.00 0.00 0.00 1.40
2506 2655 2.850568 ACTCCCTCCGTTCCCAAATATT 59.149 45.455 0.00 0.00 0.00 1.28
2507 2656 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
2508 2657 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2509 2658 1.838077 CTACTCCCTCCGTTCCCAAAT 59.162 52.381 0.00 0.00 0.00 2.32
2510 2659 1.272807 CTACTCCCTCCGTTCCCAAA 58.727 55.000 0.00 0.00 0.00 3.28
2511 2660 0.115745 ACTACTCCCTCCGTTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
2512 2661 1.002069 TACTACTCCCTCCGTTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
2513 2662 1.213926 TCTACTACTCCCTCCGTTCCC 59.786 57.143 0.00 0.00 0.00 3.97
2514 2663 2.172293 TCTCTACTACTCCCTCCGTTCC 59.828 54.545 0.00 0.00 0.00 3.62
2515 2664 3.557228 TCTCTACTACTCCCTCCGTTC 57.443 52.381 0.00 0.00 0.00 3.95
2516 2665 3.494749 CGATCTCTACTACTCCCTCCGTT 60.495 52.174 0.00 0.00 0.00 4.44
2517 2666 2.037511 CGATCTCTACTACTCCCTCCGT 59.962 54.545 0.00 0.00 0.00 4.69
2518 2667 2.037511 ACGATCTCTACTACTCCCTCCG 59.962 54.545 0.00 0.00 0.00 4.63
2519 2668 3.775261 ACGATCTCTACTACTCCCTCC 57.225 52.381 0.00 0.00 0.00 4.30
2520 2669 3.816523 CCAACGATCTCTACTACTCCCTC 59.183 52.174 0.00 0.00 0.00 4.30
2521 2670 3.202595 ACCAACGATCTCTACTACTCCCT 59.797 47.826 0.00 0.00 0.00 4.20
2522 2671 3.553904 ACCAACGATCTCTACTACTCCC 58.446 50.000 0.00 0.00 0.00 4.30
2523 2672 5.609423 TCTACCAACGATCTCTACTACTCC 58.391 45.833 0.00 0.00 0.00 3.85
2524 2673 6.282930 ACTCTACCAACGATCTCTACTACTC 58.717 44.000 0.00 0.00 0.00 2.59
2525 2674 6.237887 ACTCTACCAACGATCTCTACTACT 57.762 41.667 0.00 0.00 0.00 2.57
2526 2675 6.923928 AACTCTACCAACGATCTCTACTAC 57.076 41.667 0.00 0.00 0.00 2.73
2538 2687 3.077359 AGCTGATGCAAACTCTACCAAC 58.923 45.455 0.00 0.00 42.74 3.77
2581 2730 4.262164 GCCTCCAACATTTGAATTCACAGT 60.262 41.667 7.89 4.24 0.00 3.55
2675 2824 7.129425 AGAATCCTAGACAAGAACCTACTGAT 58.871 38.462 0.00 0.00 0.00 2.90
2676 2825 6.494952 AGAATCCTAGACAAGAACCTACTGA 58.505 40.000 0.00 0.00 0.00 3.41
2708 2857 3.181487 GCAAAACGGCTAACCATGATGAT 60.181 43.478 0.00 0.00 34.57 2.45
2741 2890 9.408648 AGAAATAAAAATTACATCCAGATCCGT 57.591 29.630 0.00 0.00 0.00 4.69
2742 2891 9.669353 CAGAAATAAAAATTACATCCAGATCCG 57.331 33.333 0.00 0.00 0.00 4.18
2743 2892 9.971922 CCAGAAATAAAAATTACATCCAGATCC 57.028 33.333 0.00 0.00 0.00 3.36
2758 2907 8.231837 GCAGTACAACGAATACCAGAAATAAAA 58.768 33.333 0.00 0.00 0.00 1.52
2759 2908 7.148373 GGCAGTACAACGAATACCAGAAATAAA 60.148 37.037 0.00 0.00 0.00 1.40
2760 2909 6.314400 GGCAGTACAACGAATACCAGAAATAA 59.686 38.462 0.00 0.00 0.00 1.40
2761 2910 5.813672 GGCAGTACAACGAATACCAGAAATA 59.186 40.000 0.00 0.00 0.00 1.40
2762 2911 4.634443 GGCAGTACAACGAATACCAGAAAT 59.366 41.667 0.00 0.00 0.00 2.17
2763 2912 3.998341 GGCAGTACAACGAATACCAGAAA 59.002 43.478 0.00 0.00 0.00 2.52
2764 2913 3.007074 TGGCAGTACAACGAATACCAGAA 59.993 43.478 0.00 0.00 0.00 3.02
2765 2914 2.563620 TGGCAGTACAACGAATACCAGA 59.436 45.455 0.00 0.00 0.00 3.86
2766 2915 2.967362 TGGCAGTACAACGAATACCAG 58.033 47.619 0.00 0.00 0.00 4.00
2767 2916 3.055747 TCATGGCAGTACAACGAATACCA 60.056 43.478 0.00 0.00 0.00 3.25
2768 2917 3.527533 TCATGGCAGTACAACGAATACC 58.472 45.455 0.00 0.00 0.00 2.73
2769 2918 5.293324 TCAATCATGGCAGTACAACGAATAC 59.707 40.000 0.00 0.00 0.00 1.89
2770 2919 5.423886 TCAATCATGGCAGTACAACGAATA 58.576 37.500 0.00 0.00 0.00 1.75
2771 2920 4.260985 TCAATCATGGCAGTACAACGAAT 58.739 39.130 0.00 0.00 0.00 3.34
2772 2921 3.669536 TCAATCATGGCAGTACAACGAA 58.330 40.909 0.00 0.00 0.00 3.85
2773 2922 3.326836 TCAATCATGGCAGTACAACGA 57.673 42.857 0.00 0.00 0.00 3.85
2774 2923 3.684305 TCTTCAATCATGGCAGTACAACG 59.316 43.478 0.00 0.00 0.00 4.10
2775 2924 5.355071 TCATCTTCAATCATGGCAGTACAAC 59.645 40.000 0.00 0.00 0.00 3.32
2776 2925 5.499313 TCATCTTCAATCATGGCAGTACAA 58.501 37.500 0.00 0.00 0.00 2.41
2777 2926 5.101648 TCATCTTCAATCATGGCAGTACA 57.898 39.130 0.00 0.00 0.00 2.90
2778 2927 6.630444 ATTCATCTTCAATCATGGCAGTAC 57.370 37.500 0.00 0.00 0.00 2.73
2779 2928 7.738847 TCTATTCATCTTCAATCATGGCAGTA 58.261 34.615 0.00 0.00 0.00 2.74
2780 2929 6.598503 TCTATTCATCTTCAATCATGGCAGT 58.401 36.000 0.00 0.00 0.00 4.40
2781 2930 7.689446 ATCTATTCATCTTCAATCATGGCAG 57.311 36.000 0.00 0.00 0.00 4.85
2782 2931 7.722285 TCAATCTATTCATCTTCAATCATGGCA 59.278 33.333 0.00 0.00 0.00 4.92
2783 2932 8.107399 TCAATCTATTCATCTTCAATCATGGC 57.893 34.615 0.00 0.00 0.00 4.40
2793 2942 9.846248 CGGAAAAACTTTCAATCTATTCATCTT 57.154 29.630 1.88 0.00 0.00 2.40
2794 2943 7.970614 GCGGAAAAACTTTCAATCTATTCATCT 59.029 33.333 1.88 0.00 0.00 2.90
2795 2944 7.754924 TGCGGAAAAACTTTCAATCTATTCATC 59.245 33.333 1.88 0.00 0.00 2.92
2796 2945 7.601856 TGCGGAAAAACTTTCAATCTATTCAT 58.398 30.769 1.88 0.00 0.00 2.57
2797 2946 6.976088 TGCGGAAAAACTTTCAATCTATTCA 58.024 32.000 1.88 0.00 0.00 2.57
2798 2947 7.867445 TTGCGGAAAAACTTTCAATCTATTC 57.133 32.000 0.00 0.00 0.00 1.75
2799 2948 8.655651 TTTTGCGGAAAAACTTTCAATCTATT 57.344 26.923 12.75 0.00 32.72 1.73
2800 2949 8.655651 TTTTTGCGGAAAAACTTTCAATCTAT 57.344 26.923 21.65 0.00 37.48 1.98
2802 2951 6.976636 TTTTTGCGGAAAAACTTTCAATCT 57.023 29.167 21.65 0.00 37.48 2.40
2850 2999 3.860754 GCAGGCTGCGGAAAGTTATTTTT 60.861 43.478 25.47 0.00 31.71 1.94
2851 3000 2.352715 GCAGGCTGCGGAAAGTTATTTT 60.353 45.455 25.47 0.00 31.71 1.82
2852 3001 1.202348 GCAGGCTGCGGAAAGTTATTT 59.798 47.619 25.47 0.00 31.71 1.40
2853 3002 0.811281 GCAGGCTGCGGAAAGTTATT 59.189 50.000 25.47 0.00 31.71 1.40
2854 3003 2.482326 GCAGGCTGCGGAAAGTTAT 58.518 52.632 25.47 0.00 31.71 1.89
2855 3004 3.981308 GCAGGCTGCGGAAAGTTA 58.019 55.556 25.47 0.00 31.71 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.