Multiple sequence alignment - TraesCS2B01G320200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G320200 chr2B 100.000 2976 0 0 1 2976 456179856 456176881 0.000000e+00 5496.0
1 TraesCS2B01G320200 chr2B 98.214 168 2 1 2616 2782 389469240 389469407 2.900000e-75 292.0
2 TraesCS2B01G320200 chr2B 89.412 85 5 2 1531 1611 12015691 12015775 1.460000e-18 104.0
3 TraesCS2B01G320200 chr2B 88.764 89 5 3 1531 1615 693723491 693723404 1.460000e-18 104.0
4 TraesCS2B01G320200 chr2B 91.026 78 3 4 1531 1604 42489770 42489693 5.250000e-18 102.0
5 TraesCS2B01G320200 chr2D 89.835 1033 76 16 1610 2620 385280300 385279275 0.000000e+00 1299.0
6 TraesCS2B01G320200 chr2D 93.396 424 14 7 1023 1437 385280911 385280493 1.520000e-172 616.0
7 TraesCS2B01G320200 chr2D 91.710 193 15 1 2785 2976 385279270 385279078 1.760000e-67 267.0
8 TraesCS2B01G320200 chr2D 92.157 51 4 0 1482 1532 385280349 385280299 4.110000e-09 73.1
9 TraesCS2B01G320200 chr6B 92.387 775 48 5 2 766 565222645 565223418 0.000000e+00 1094.0
10 TraesCS2B01G320200 chr3B 91.860 774 54 2 2 766 549007826 549007053 0.000000e+00 1072.0
11 TraesCS2B01G320200 chr3B 92.037 766 52 2 2 758 636684639 636683874 0.000000e+00 1068.0
12 TraesCS2B01G320200 chr3B 91.473 774 57 3 2 766 598165113 598165886 0.000000e+00 1055.0
13 TraesCS2B01G320200 chr3B 96.471 170 3 3 2616 2783 225180126 225179958 8.120000e-71 278.0
14 TraesCS2B01G320200 chr3B 91.304 46 3 1 763 807 719785023 719785068 8.910000e-06 62.1
15 TraesCS2B01G320200 chr4B 91.731 774 54 3 2 766 582135584 582136356 0.000000e+00 1066.0
16 TraesCS2B01G320200 chr5B 91.917 767 52 3 2 759 172468049 172468814 0.000000e+00 1064.0
17 TraesCS2B01G320200 chr5B 91.917 767 52 4 2 759 397455332 397456097 0.000000e+00 1064.0
18 TraesCS2B01G320200 chr5B 90.476 84 5 1 1531 1611 689600791 689600708 1.130000e-19 108.0
19 TraesCS2B01G320200 chr5A 91.613 775 54 4 2 766 4737242 4736469 0.000000e+00 1061.0
20 TraesCS2B01G320200 chr5A 93.443 183 9 3 2601 2781 290391875 290391694 4.890000e-68 268.0
21 TraesCS2B01G320200 chr5A 88.506 87 7 1 1528 1611 539091368 539091454 5.250000e-18 102.0
22 TraesCS2B01G320200 chr3D 91.667 768 61 1 2 766 359994643 359995410 0.000000e+00 1061.0
23 TraesCS2B01G320200 chr3D 76.136 176 37 4 764 936 424468074 424467901 1.470000e-13 87.9
24 TraesCS2B01G320200 chr2A 92.952 525 28 4 1017 1532 520564393 520563869 0.000000e+00 756.0
25 TraesCS2B01G320200 chr2A 89.858 562 37 9 1610 2155 520563870 520563313 0.000000e+00 704.0
26 TraesCS2B01G320200 chr2A 92.228 193 14 1 2785 2976 520562884 520562692 3.780000e-69 272.0
27 TraesCS2B01G320200 chr2A 89.873 79 5 1 1534 1609 719476167 719476089 6.790000e-17 99.0
28 TraesCS2B01G320200 chr7B 97.661 171 2 2 2610 2778 265440511 265440681 2.900000e-75 292.0
29 TraesCS2B01G320200 chr7B 89.535 86 5 2 1530 1611 22839737 22839652 4.060000e-19 106.0
30 TraesCS2B01G320200 chr7D 94.475 181 6 4 2604 2781 39001273 39001452 2.920000e-70 276.0
31 TraesCS2B01G320200 chr1B 93.443 183 9 3 2598 2778 628050670 628050851 4.890000e-68 268.0
32 TraesCS2B01G320200 chr6D 93.407 182 9 3 2612 2791 389700709 389700529 1.760000e-67 267.0
33 TraesCS2B01G320200 chr1D 92.473 186 10 4 2594 2775 444346143 444346328 2.270000e-66 263.0
34 TraesCS2B01G320200 chr1A 92.063 189 12 3 2606 2792 377500220 377500407 2.270000e-66 263.0
35 TraesCS2B01G320200 chrUn 91.026 78 3 4 1531 1604 354372453 354372376 5.250000e-18 102.0
36 TraesCS2B01G320200 chr4A 88.235 85 6 2 1531 1611 610252636 610252552 6.790000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G320200 chr2B 456176881 456179856 2975 True 5496.000000 5496 100.000000 1 2976 1 chr2B.!!$R2 2975
1 TraesCS2B01G320200 chr2D 385279078 385280911 1833 True 563.775000 1299 91.774500 1023 2976 4 chr2D.!!$R1 1953
2 TraesCS2B01G320200 chr6B 565222645 565223418 773 False 1094.000000 1094 92.387000 2 766 1 chr6B.!!$F1 764
3 TraesCS2B01G320200 chr3B 549007053 549007826 773 True 1072.000000 1072 91.860000 2 766 1 chr3B.!!$R2 764
4 TraesCS2B01G320200 chr3B 636683874 636684639 765 True 1068.000000 1068 92.037000 2 758 1 chr3B.!!$R3 756
5 TraesCS2B01G320200 chr3B 598165113 598165886 773 False 1055.000000 1055 91.473000 2 766 1 chr3B.!!$F1 764
6 TraesCS2B01G320200 chr4B 582135584 582136356 772 False 1066.000000 1066 91.731000 2 766 1 chr4B.!!$F1 764
7 TraesCS2B01G320200 chr5B 172468049 172468814 765 False 1064.000000 1064 91.917000 2 759 1 chr5B.!!$F1 757
8 TraesCS2B01G320200 chr5B 397455332 397456097 765 False 1064.000000 1064 91.917000 2 759 1 chr5B.!!$F2 757
9 TraesCS2B01G320200 chr5A 4736469 4737242 773 True 1061.000000 1061 91.613000 2 766 1 chr5A.!!$R1 764
10 TraesCS2B01G320200 chr3D 359994643 359995410 767 False 1061.000000 1061 91.667000 2 766 1 chr3D.!!$F1 764
11 TraesCS2B01G320200 chr2A 520562692 520564393 1701 True 577.333333 756 91.679333 1017 2976 3 chr2A.!!$R2 1959

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
997 1008 0.108615 CTAGAAGTGAGTGCGGGTGG 60.109 60.0 0.0 0.0 0.00 4.61 F
1814 1972 0.249447 GTTGTTGAACTGCTTGGGGC 60.249 55.0 0.0 0.0 42.22 5.80 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1877 2040 0.033504 AGGTACGTGTCCTGCAGTTG 59.966 55.000 13.81 0.0 33.62 3.16 R
2954 3169 1.079127 GAGCAGCACCGCCTAAAGA 60.079 57.895 0.00 0.0 0.00 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 5.439721 CCAACTTGACATAGATCCCAATGA 58.560 41.667 7.17 0.00 0.00 2.57
151 153 2.933260 GTGGAAATTTGTGCACGGTTTT 59.067 40.909 13.13 11.03 29.77 2.43
236 244 3.142407 ACCCCAAACTTATGGTACCCAAA 59.858 43.478 10.07 2.50 38.91 3.28
242 250 5.853572 AACTTATGGTACCCAAAAGGAGA 57.146 39.130 10.07 0.00 36.95 3.71
254 262 4.065088 CCAAAAGGAGACAACTTCGATCA 58.935 43.478 0.00 0.00 0.00 2.92
265 273 5.680619 ACAACTTCGATCATTTGGGCTATA 58.319 37.500 0.00 0.00 0.00 1.31
282 290 3.070159 GCTATACAGACTCAGATTGGGCA 59.930 47.826 0.00 0.00 0.00 5.36
350 358 3.569194 TGGTTGCTCTTTGGTGAGTTA 57.431 42.857 0.00 0.00 36.51 2.24
354 362 3.402628 TGCTCTTTGGTGAGTTAGTCC 57.597 47.619 0.00 0.00 36.51 3.85
392 403 1.202891 TGTGTCTCTCTCCACCGAAGA 60.203 52.381 0.00 0.00 0.00 2.87
516 527 7.774625 TGTGATAATGAAAGTGCCATCAAGATA 59.225 33.333 0.00 0.00 0.00 1.98
525 536 6.436738 AGTGCCATCAAGATATCTCTCAAT 57.563 37.500 5.51 0.00 0.00 2.57
570 581 7.173218 ACGAAGCATATTGAAATTCGGTATCAT 59.827 33.333 9.99 0.00 45.16 2.45
639 650 5.934043 TGTCAACACTCATGATAACCTTGAG 59.066 40.000 0.00 0.00 46.62 3.02
668 679 2.154462 CACGAAGCCCTTGAATGAAGT 58.846 47.619 0.00 0.00 0.00 3.01
701 712 5.333416 GCGAGTTAAGGCATGAGCTAAATAC 60.333 44.000 0.00 0.00 41.70 1.89
734 745 4.645535 AGCAATGTAGCTTGAACTCTTGA 58.354 39.130 0.00 0.00 43.70 3.02
750 761 2.714250 TCTTGAACACCCCACCATACTT 59.286 45.455 0.00 0.00 0.00 2.24
762 773 5.496556 CCCACCATACTTAACTTGATGTCA 58.503 41.667 0.00 0.00 0.00 3.58
766 777 7.414429 CCACCATACTTAACTTGATGTCATGTG 60.414 40.741 2.76 0.00 34.92 3.21
767 778 6.599244 ACCATACTTAACTTGATGTCATGTGG 59.401 38.462 2.76 0.00 34.92 4.17
768 779 6.599244 CCATACTTAACTTGATGTCATGTGGT 59.401 38.462 2.76 5.53 34.92 4.16
769 780 7.121168 CCATACTTAACTTGATGTCATGTGGTT 59.879 37.037 2.76 0.00 34.92 3.67
770 781 6.317789 ACTTAACTTGATGTCATGTGGTTG 57.682 37.500 2.76 0.00 34.92 3.77
771 782 6.061441 ACTTAACTTGATGTCATGTGGTTGA 58.939 36.000 2.76 0.00 34.92 3.18
772 783 6.545666 ACTTAACTTGATGTCATGTGGTTGAA 59.454 34.615 2.76 0.00 34.92 2.69
773 784 7.231317 ACTTAACTTGATGTCATGTGGTTGAAT 59.769 33.333 2.76 0.00 34.92 2.57
774 785 5.381174 ACTTGATGTCATGTGGTTGAATG 57.619 39.130 0.00 0.00 33.67 2.67
775 786 4.219070 ACTTGATGTCATGTGGTTGAATGG 59.781 41.667 0.00 0.00 33.67 3.16
776 787 3.765381 TGATGTCATGTGGTTGAATGGT 58.235 40.909 0.00 0.00 0.00 3.55
777 788 4.151121 TGATGTCATGTGGTTGAATGGTT 58.849 39.130 0.00 0.00 0.00 3.67
778 789 5.320277 TGATGTCATGTGGTTGAATGGTTA 58.680 37.500 0.00 0.00 0.00 2.85
779 790 5.415389 TGATGTCATGTGGTTGAATGGTTAG 59.585 40.000 0.00 0.00 0.00 2.34
780 791 4.078537 TGTCATGTGGTTGAATGGTTAGG 58.921 43.478 0.00 0.00 0.00 2.69
781 792 4.202514 TGTCATGTGGTTGAATGGTTAGGA 60.203 41.667 0.00 0.00 0.00 2.94
782 793 4.396166 GTCATGTGGTTGAATGGTTAGGAG 59.604 45.833 0.00 0.00 0.00 3.69
783 794 4.288366 TCATGTGGTTGAATGGTTAGGAGA 59.712 41.667 0.00 0.00 0.00 3.71
784 795 4.715534 TGTGGTTGAATGGTTAGGAGAA 57.284 40.909 0.00 0.00 0.00 2.87
785 796 4.394729 TGTGGTTGAATGGTTAGGAGAAC 58.605 43.478 0.00 0.00 0.00 3.01
786 797 4.141367 TGTGGTTGAATGGTTAGGAGAACA 60.141 41.667 0.00 0.00 0.00 3.18
787 798 4.825085 GTGGTTGAATGGTTAGGAGAACAA 59.175 41.667 0.00 0.00 0.00 2.83
788 799 5.476945 GTGGTTGAATGGTTAGGAGAACAAT 59.523 40.000 0.00 0.00 0.00 2.71
789 800 5.476599 TGGTTGAATGGTTAGGAGAACAATG 59.523 40.000 0.00 0.00 0.00 2.82
790 801 5.710099 GGTTGAATGGTTAGGAGAACAATGA 59.290 40.000 0.00 0.00 0.00 2.57
791 802 6.378280 GGTTGAATGGTTAGGAGAACAATGAT 59.622 38.462 0.00 0.00 0.00 2.45
792 803 7.556275 GGTTGAATGGTTAGGAGAACAATGATA 59.444 37.037 0.00 0.00 0.00 2.15
793 804 9.125026 GTTGAATGGTTAGGAGAACAATGATAT 57.875 33.333 0.00 0.00 0.00 1.63
794 805 9.699410 TTGAATGGTTAGGAGAACAATGATATT 57.301 29.630 0.00 0.00 0.00 1.28
795 806 9.699410 TGAATGGTTAGGAGAACAATGATATTT 57.301 29.630 0.00 0.00 0.00 1.40
798 809 9.699410 ATGGTTAGGAGAACAATGATATTTTCA 57.301 29.630 0.00 0.00 39.12 2.69
802 813 9.919416 TTAGGAGAACAATGATATTTTCATCCA 57.081 29.630 0.00 0.00 44.51 3.41
804 815 9.075678 AGGAGAACAATGATATTTTCATCCATC 57.924 33.333 0.00 0.00 44.51 3.51
805 816 8.853126 GGAGAACAATGATATTTTCATCCATCA 58.147 33.333 0.00 0.00 44.51 3.07
806 817 9.894783 GAGAACAATGATATTTTCATCCATCAG 57.105 33.333 0.00 0.00 44.51 2.90
807 818 9.636789 AGAACAATGATATTTTCATCCATCAGA 57.363 29.630 0.00 0.00 44.51 3.27
808 819 9.894783 GAACAATGATATTTTCATCCATCAGAG 57.105 33.333 0.00 0.00 44.51 3.35
809 820 8.991783 ACAATGATATTTTCATCCATCAGAGT 57.008 30.769 0.00 0.00 44.51 3.24
810 821 9.417561 ACAATGATATTTTCATCCATCAGAGTT 57.582 29.630 0.00 0.00 44.51 3.01
838 849 9.507280 AATTATTAGCTTTGACATTGATGTTCG 57.493 29.630 0.00 0.00 41.95 3.95
839 850 3.207474 AGCTTTGACATTGATGTTCGC 57.793 42.857 0.00 0.22 41.95 4.70
840 851 2.553602 AGCTTTGACATTGATGTTCGCA 59.446 40.909 0.00 0.00 41.95 5.10
841 852 3.192001 AGCTTTGACATTGATGTTCGCAT 59.808 39.130 0.00 0.00 41.95 4.73
842 853 3.922240 GCTTTGACATTGATGTTCGCATT 59.078 39.130 0.00 0.00 41.95 3.56
843 854 4.386652 GCTTTGACATTGATGTTCGCATTT 59.613 37.500 0.00 0.00 41.95 2.32
844 855 5.107375 GCTTTGACATTGATGTTCGCATTTT 60.107 36.000 0.00 0.00 41.95 1.82
845 856 6.450845 TTTGACATTGATGTTCGCATTTTC 57.549 33.333 0.00 0.00 41.95 2.29
846 857 5.375417 TGACATTGATGTTCGCATTTTCT 57.625 34.783 0.00 0.00 41.95 2.52
847 858 6.493449 TGACATTGATGTTCGCATTTTCTA 57.507 33.333 0.00 0.00 41.95 2.10
848 859 6.907741 TGACATTGATGTTCGCATTTTCTAA 58.092 32.000 0.00 0.00 41.95 2.10
849 860 7.537715 TGACATTGATGTTCGCATTTTCTAAT 58.462 30.769 0.00 0.00 41.95 1.73
850 861 8.028354 TGACATTGATGTTCGCATTTTCTAATT 58.972 29.630 0.00 0.00 41.95 1.40
851 862 8.761575 ACATTGATGTTCGCATTTTCTAATTT 57.238 26.923 0.00 0.00 37.90 1.82
852 863 9.206870 ACATTGATGTTCGCATTTTCTAATTTT 57.793 25.926 0.00 0.00 37.90 1.82
860 871 9.675553 GTTCGCATTTTCTAATTTTATTTCAGC 57.324 29.630 0.00 0.00 0.00 4.26
861 872 8.406172 TCGCATTTTCTAATTTTATTTCAGCC 57.594 30.769 0.00 0.00 0.00 4.85
862 873 8.250332 TCGCATTTTCTAATTTTATTTCAGCCT 58.750 29.630 0.00 0.00 0.00 4.58
863 874 8.872845 CGCATTTTCTAATTTTATTTCAGCCTT 58.127 29.630 0.00 0.00 0.00 4.35
876 887 9.995003 TTTATTTCAGCCTTTTTAATGATGTGT 57.005 25.926 0.00 0.00 0.00 3.72
877 888 7.894376 ATTTCAGCCTTTTTAATGATGTGTG 57.106 32.000 0.00 0.00 0.00 3.82
878 889 6.403866 TTCAGCCTTTTTAATGATGTGTGT 57.596 33.333 0.00 0.00 0.00 3.72
879 890 6.403866 TCAGCCTTTTTAATGATGTGTGTT 57.596 33.333 0.00 0.00 0.00 3.32
880 891 6.815089 TCAGCCTTTTTAATGATGTGTGTTT 58.185 32.000 0.00 0.00 0.00 2.83
881 892 7.946207 TCAGCCTTTTTAATGATGTGTGTTTA 58.054 30.769 0.00 0.00 0.00 2.01
882 893 8.081633 TCAGCCTTTTTAATGATGTGTGTTTAG 58.918 33.333 0.00 0.00 0.00 1.85
883 894 6.868339 AGCCTTTTTAATGATGTGTGTTTAGC 59.132 34.615 0.00 0.00 0.00 3.09
884 895 6.183359 GCCTTTTTAATGATGTGTGTTTAGCG 60.183 38.462 0.00 0.00 0.00 4.26
885 896 7.081349 CCTTTTTAATGATGTGTGTTTAGCGA 58.919 34.615 0.00 0.00 0.00 4.93
886 897 7.271223 CCTTTTTAATGATGTGTGTTTAGCGAG 59.729 37.037 0.00 0.00 0.00 5.03
887 898 5.794687 TTAATGATGTGTGTTTAGCGAGG 57.205 39.130 0.00 0.00 0.00 4.63
888 899 2.093306 TGATGTGTGTTTAGCGAGGG 57.907 50.000 0.00 0.00 0.00 4.30
889 900 1.338674 TGATGTGTGTTTAGCGAGGGG 60.339 52.381 0.00 0.00 0.00 4.79
890 901 0.981183 ATGTGTGTTTAGCGAGGGGA 59.019 50.000 0.00 0.00 0.00 4.81
891 902 0.320374 TGTGTGTTTAGCGAGGGGAG 59.680 55.000 0.00 0.00 0.00 4.30
892 903 0.606604 GTGTGTTTAGCGAGGGGAGA 59.393 55.000 0.00 0.00 0.00 3.71
893 904 0.606604 TGTGTTTAGCGAGGGGAGAC 59.393 55.000 0.00 0.00 0.00 3.36
894 905 0.896226 GTGTTTAGCGAGGGGAGACT 59.104 55.000 0.00 0.00 0.00 3.24
895 906 1.275573 GTGTTTAGCGAGGGGAGACTT 59.724 52.381 0.00 0.00 0.00 3.01
896 907 1.975680 TGTTTAGCGAGGGGAGACTTT 59.024 47.619 0.00 0.00 0.00 2.66
897 908 2.370849 TGTTTAGCGAGGGGAGACTTTT 59.629 45.455 0.00 0.00 0.00 2.27
898 909 3.181448 TGTTTAGCGAGGGGAGACTTTTT 60.181 43.478 0.00 0.00 0.00 1.94
899 910 3.329929 TTAGCGAGGGGAGACTTTTTC 57.670 47.619 0.00 0.00 0.00 2.29
900 911 1.056660 AGCGAGGGGAGACTTTTTCA 58.943 50.000 0.00 0.00 0.00 2.69
901 912 1.630878 AGCGAGGGGAGACTTTTTCAT 59.369 47.619 0.00 0.00 0.00 2.57
902 913 2.010497 GCGAGGGGAGACTTTTTCATC 58.990 52.381 0.00 0.00 0.00 2.92
903 914 2.271800 CGAGGGGAGACTTTTTCATCG 58.728 52.381 0.00 0.00 0.00 3.84
904 915 2.094182 CGAGGGGAGACTTTTTCATCGA 60.094 50.000 0.00 0.00 0.00 3.59
905 916 3.430929 CGAGGGGAGACTTTTTCATCGAT 60.431 47.826 0.00 0.00 0.00 3.59
906 917 4.518249 GAGGGGAGACTTTTTCATCGATT 58.482 43.478 0.00 0.00 0.00 3.34
907 918 5.671493 GAGGGGAGACTTTTTCATCGATTA 58.329 41.667 0.00 0.00 0.00 1.75
908 919 6.253946 AGGGGAGACTTTTTCATCGATTAT 57.746 37.500 0.00 0.00 0.00 1.28
909 920 6.058183 AGGGGAGACTTTTTCATCGATTATG 58.942 40.000 0.00 0.00 36.88 1.90
910 921 6.055588 GGGGAGACTTTTTCATCGATTATGA 58.944 40.000 0.00 0.00 43.03 2.15
923 934 7.909267 TCATCGATTATGAAGATGTTTGTGAC 58.091 34.615 0.00 0.00 41.75 3.67
924 935 6.331170 TCGATTATGAAGATGTTTGTGACG 57.669 37.500 0.00 0.00 0.00 4.35
925 936 6.096695 TCGATTATGAAGATGTTTGTGACGA 58.903 36.000 0.00 0.00 0.00 4.20
926 937 6.034577 TCGATTATGAAGATGTTTGTGACGAC 59.965 38.462 0.00 0.00 0.00 4.34
927 938 6.035005 CGATTATGAAGATGTTTGTGACGACT 59.965 38.462 0.00 0.00 0.00 4.18
928 939 7.411912 CGATTATGAAGATGTTTGTGACGACTT 60.412 37.037 0.00 0.00 0.00 3.01
929 940 7.490962 TTATGAAGATGTTTGTGACGACTTT 57.509 32.000 0.00 0.00 0.00 2.66
930 941 8.596271 TTATGAAGATGTTTGTGACGACTTTA 57.404 30.769 0.00 0.00 0.00 1.85
931 942 7.672983 ATGAAGATGTTTGTGACGACTTTAT 57.327 32.000 0.00 0.00 0.00 1.40
932 943 7.117241 TGAAGATGTTTGTGACGACTTTATC 57.883 36.000 0.00 0.00 0.00 1.75
933 944 6.704050 TGAAGATGTTTGTGACGACTTTATCA 59.296 34.615 0.00 0.00 0.00 2.15
934 945 7.225734 TGAAGATGTTTGTGACGACTTTATCAA 59.774 33.333 0.00 0.00 0.00 2.57
935 946 7.672983 AGATGTTTGTGACGACTTTATCAAT 57.327 32.000 0.00 0.00 0.00 2.57
936 947 7.743104 AGATGTTTGTGACGACTTTATCAATC 58.257 34.615 0.00 0.00 0.00 2.67
937 948 6.236017 TGTTTGTGACGACTTTATCAATCC 57.764 37.500 0.00 0.00 0.00 3.01
938 949 5.760743 TGTTTGTGACGACTTTATCAATCCA 59.239 36.000 0.00 0.00 0.00 3.41
939 950 6.073276 TGTTTGTGACGACTTTATCAATCCAG 60.073 38.462 0.00 0.00 0.00 3.86
940 951 5.400066 TGTGACGACTTTATCAATCCAGA 57.600 39.130 0.00 0.00 0.00 3.86
941 952 5.977635 TGTGACGACTTTATCAATCCAGAT 58.022 37.500 0.00 0.00 0.00 2.90
942 953 5.812127 TGTGACGACTTTATCAATCCAGATG 59.188 40.000 0.00 0.00 0.00 2.90
943 954 6.042777 GTGACGACTTTATCAATCCAGATGA 58.957 40.000 0.00 0.00 0.00 2.92
944 955 6.199908 GTGACGACTTTATCAATCCAGATGAG 59.800 42.308 0.00 0.00 0.00 2.90
945 956 6.096846 TGACGACTTTATCAATCCAGATGAGA 59.903 38.462 0.00 0.00 0.00 3.27
946 957 7.060383 ACGACTTTATCAATCCAGATGAGAT 57.940 36.000 0.00 2.59 0.00 2.75
947 958 8.183104 ACGACTTTATCAATCCAGATGAGATA 57.817 34.615 0.00 0.00 0.00 1.98
948 959 8.085296 ACGACTTTATCAATCCAGATGAGATAC 58.915 37.037 0.00 0.00 0.00 2.24
949 960 8.303156 CGACTTTATCAATCCAGATGAGATACT 58.697 37.037 3.73 0.00 0.00 2.12
953 964 9.828691 TTTATCAATCCAGATGAGATACTAGGA 57.171 33.333 0.00 0.00 0.00 2.94
954 965 7.959658 ATCAATCCAGATGAGATACTAGGAG 57.040 40.000 0.00 0.00 0.00 3.69
955 966 6.857848 TCAATCCAGATGAGATACTAGGAGT 58.142 40.000 0.00 0.00 0.00 3.85
956 967 7.301420 TCAATCCAGATGAGATACTAGGAGTT 58.699 38.462 0.00 0.00 0.00 3.01
957 968 7.232330 TCAATCCAGATGAGATACTAGGAGTTG 59.768 40.741 0.00 0.00 0.00 3.16
958 969 4.830046 TCCAGATGAGATACTAGGAGTTGC 59.170 45.833 0.00 0.00 0.00 4.17
959 970 4.832266 CCAGATGAGATACTAGGAGTTGCT 59.168 45.833 0.00 0.00 0.00 3.91
960 971 5.048083 CCAGATGAGATACTAGGAGTTGCTC 60.048 48.000 0.00 0.00 31.79 4.26
961 972 4.759693 AGATGAGATACTAGGAGTTGCTCG 59.240 45.833 0.00 0.00 32.98 5.03
962 973 3.215151 TGAGATACTAGGAGTTGCTCGG 58.785 50.000 0.00 0.00 32.98 4.63
963 974 2.554893 GAGATACTAGGAGTTGCTCGGG 59.445 54.545 0.00 0.00 0.00 5.14
964 975 1.000052 GATACTAGGAGTTGCTCGGGC 60.000 57.143 0.00 0.00 39.26 6.13
992 1003 4.921547 TGCTTATACTAGAAGTGAGTGCG 58.078 43.478 0.00 0.00 0.00 5.34
993 1004 4.202020 TGCTTATACTAGAAGTGAGTGCGG 60.202 45.833 0.00 0.00 0.00 5.69
994 1005 4.793353 GCTTATACTAGAAGTGAGTGCGGG 60.793 50.000 0.00 0.00 0.00 6.13
995 1006 2.211250 TACTAGAAGTGAGTGCGGGT 57.789 50.000 0.00 0.00 0.00 5.28
996 1007 0.603569 ACTAGAAGTGAGTGCGGGTG 59.396 55.000 0.00 0.00 0.00 4.61
997 1008 0.108615 CTAGAAGTGAGTGCGGGTGG 60.109 60.000 0.00 0.00 0.00 4.61
998 1009 1.541310 TAGAAGTGAGTGCGGGTGGG 61.541 60.000 0.00 0.00 0.00 4.61
999 1010 3.168528 AAGTGAGTGCGGGTGGGT 61.169 61.111 0.00 0.00 0.00 4.51
1000 1011 1.823169 GAAGTGAGTGCGGGTGGGTA 61.823 60.000 0.00 0.00 0.00 3.69
1001 1012 1.198759 AAGTGAGTGCGGGTGGGTAT 61.199 55.000 0.00 0.00 0.00 2.73
1002 1013 1.449601 GTGAGTGCGGGTGGGTATG 60.450 63.158 0.00 0.00 0.00 2.39
1003 1014 1.916273 TGAGTGCGGGTGGGTATGT 60.916 57.895 0.00 0.00 0.00 2.29
1004 1015 0.615261 TGAGTGCGGGTGGGTATGTA 60.615 55.000 0.00 0.00 0.00 2.29
1005 1016 0.756903 GAGTGCGGGTGGGTATGTAT 59.243 55.000 0.00 0.00 0.00 2.29
1006 1017 1.965643 GAGTGCGGGTGGGTATGTATA 59.034 52.381 0.00 0.00 0.00 1.47
1007 1018 2.366266 GAGTGCGGGTGGGTATGTATAA 59.634 50.000 0.00 0.00 0.00 0.98
1008 1019 2.367567 AGTGCGGGTGGGTATGTATAAG 59.632 50.000 0.00 0.00 0.00 1.73
1009 1020 2.366266 GTGCGGGTGGGTATGTATAAGA 59.634 50.000 0.00 0.00 0.00 2.10
1010 1021 2.366266 TGCGGGTGGGTATGTATAAGAC 59.634 50.000 0.00 0.00 0.00 3.01
1011 1022 2.631545 GCGGGTGGGTATGTATAAGACT 59.368 50.000 0.00 0.00 0.00 3.24
1012 1023 3.554337 GCGGGTGGGTATGTATAAGACTG 60.554 52.174 0.00 0.00 0.00 3.51
1013 1024 3.640029 CGGGTGGGTATGTATAAGACTGT 59.360 47.826 0.00 0.00 0.00 3.55
1014 1025 4.100498 CGGGTGGGTATGTATAAGACTGTT 59.900 45.833 0.00 0.00 0.00 3.16
1015 1026 5.302568 CGGGTGGGTATGTATAAGACTGTTA 59.697 44.000 0.00 0.00 0.00 2.41
1020 1031 9.609346 GTGGGTATGTATAAGACTGTTAAACAT 57.391 33.333 0.00 0.00 0.00 2.71
1031 1043 8.687824 AAGACTGTTAAACATCACAAACAAAG 57.312 30.769 0.00 0.00 31.90 2.77
1053 1065 9.072294 CAAAGTACTTGTACAACCAAAAGAAAG 57.928 33.333 9.34 0.00 0.00 2.62
1075 1089 4.031201 AGCAAAAACACGAACAAAATCACG 59.969 37.500 0.00 0.00 0.00 4.35
1092 1106 4.520846 GGCGCGATGGCAAACGAG 62.521 66.667 12.10 16.28 44.08 4.18
1094 1108 4.851114 CGCGATGGCAAACGAGCG 62.851 66.667 18.55 14.17 41.56 5.03
1096 1110 3.787676 CGATGGCAAACGAGCGCA 61.788 61.111 11.47 0.00 34.64 6.09
1203 1223 2.564975 CAGTACCGCCTCGTCGTT 59.435 61.111 0.00 0.00 0.00 3.85
1209 1229 4.717629 CGCCTCGTCGTTCAGCCA 62.718 66.667 0.00 0.00 0.00 4.75
1409 1429 1.208706 CCCCTCTTCCCTTTCCTCTC 58.791 60.000 0.00 0.00 0.00 3.20
1450 1471 0.387929 TTGCTCCGTGAGTTTCTCGT 59.612 50.000 3.38 0.00 32.17 4.18
1453 1474 1.602165 GCTCCGTGAGTTTCTCGTTGA 60.602 52.381 3.38 0.00 32.17 3.18
1455 1476 2.663602 CTCCGTGAGTTTCTCGTTGATG 59.336 50.000 0.79 0.00 32.17 3.07
1457 1478 3.056821 TCCGTGAGTTTCTCGTTGATGAT 60.057 43.478 0.79 0.00 32.17 2.45
1469 1490 5.631096 TCTCGTTGATGATCGCTAAATGATC 59.369 40.000 0.00 0.00 42.06 2.92
1496 1649 2.233676 GCCCCAGAAAATGAAAACGGAT 59.766 45.455 0.00 0.00 0.00 4.18
1543 1696 8.420374 CGATAAGCAAAATACTCCTCTGTAAA 57.580 34.615 0.00 0.00 0.00 2.01
1544 1697 8.328864 CGATAAGCAAAATACTCCTCTGTAAAC 58.671 37.037 0.00 0.00 0.00 2.01
1545 1698 9.384764 GATAAGCAAAATACTCCTCTGTAAACT 57.615 33.333 0.00 0.00 0.00 2.66
1548 1701 9.740710 AAGCAAAATACTCCTCTGTAAACTAAT 57.259 29.630 0.00 0.00 0.00 1.73
1602 1755 9.309516 TGTTCTAAATGCTCTATTAGTTTACGG 57.690 33.333 0.00 0.00 32.27 4.02
1603 1756 9.525409 GTTCTAAATGCTCTATTAGTTTACGGA 57.475 33.333 0.00 0.00 32.27 4.69
1604 1757 9.745880 TTCTAAATGCTCTATTAGTTTACGGAG 57.254 33.333 0.00 0.00 32.27 4.63
1605 1758 8.358148 TCTAAATGCTCTATTAGTTTACGGAGG 58.642 37.037 0.00 0.00 32.27 4.30
1606 1759 4.931661 TGCTCTATTAGTTTACGGAGGG 57.068 45.455 0.00 0.00 0.00 4.30
1607 1760 4.539726 TGCTCTATTAGTTTACGGAGGGA 58.460 43.478 0.00 0.00 0.00 4.20
1608 1761 4.583489 TGCTCTATTAGTTTACGGAGGGAG 59.417 45.833 0.00 0.00 0.00 4.30
1609 1762 4.583907 GCTCTATTAGTTTACGGAGGGAGT 59.416 45.833 0.00 0.00 0.00 3.85
1610 1763 5.767168 GCTCTATTAGTTTACGGAGGGAGTA 59.233 44.000 0.00 0.00 0.00 2.59
1611 1764 6.072563 GCTCTATTAGTTTACGGAGGGAGTAG 60.073 46.154 0.00 0.00 0.00 2.57
1680 1837 4.356436 AGGGGATTTGATCTTTTTCAGGG 58.644 43.478 0.00 0.00 0.00 4.45
1741 1898 5.368145 TGGCTATGTCTACATGAACATTCC 58.632 41.667 14.89 15.35 37.15 3.01
1749 1906 6.878923 TGTCTACATGAACATTCCTTTTCGAT 59.121 34.615 0.00 0.00 0.00 3.59
1813 1971 1.402787 AGTTGTTGAACTGCTTGGGG 58.597 50.000 0.00 0.00 41.12 4.96
1814 1972 0.249447 GTTGTTGAACTGCTTGGGGC 60.249 55.000 0.00 0.00 42.22 5.80
1815 1973 0.396974 TTGTTGAACTGCTTGGGGCT 60.397 50.000 0.00 0.00 42.39 5.19
1816 1974 1.108727 TGTTGAACTGCTTGGGGCTG 61.109 55.000 0.00 0.00 44.00 4.85
1817 1975 2.202395 TTGAACTGCTTGGGGCTGC 61.202 57.895 0.00 0.00 42.51 5.25
1830 1992 3.260483 GCTGCCTGCGATCGTCTG 61.260 66.667 17.81 12.29 0.00 3.51
1839 2001 3.410850 CTGCGATCGTCTGAACATTTTG 58.589 45.455 17.81 0.00 0.00 2.44
1844 2006 5.258622 CGATCGTCTGAACATTTTGATTCC 58.741 41.667 7.03 0.00 0.00 3.01
1854 2017 3.191371 ACATTTTGATTCCTCGGCTGTTC 59.809 43.478 0.00 0.00 0.00 3.18
1877 2040 1.225704 CCCTGATGCCTGTTCCCTC 59.774 63.158 0.00 0.00 0.00 4.30
1995 2161 5.756347 TGTAGAACAAGTAAATCGTGTGCTT 59.244 36.000 0.43 0.00 40.60 3.91
2036 2209 6.313905 GCAACTGCTATGTTAGTGTATCACTT 59.686 38.462 7.70 0.00 40.70 3.16
2069 2242 1.139455 CCCAATTGATCAACCATGGCC 59.861 52.381 22.49 0.00 0.00 5.36
2097 2270 0.108992 CTTGTAAGCCCTACGTCGCA 60.109 55.000 0.00 0.00 32.65 5.10
2123 2296 5.680229 CGACTATTACGCTTAAGATTGACGT 59.320 40.000 6.67 8.41 40.53 4.34
2127 2300 5.944049 TTACGCTTAAGATTGACGTCATC 57.056 39.130 20.80 17.67 38.12 2.92
2174 2380 4.323417 TGTTAGAACATTGATGCGGAACT 58.677 39.130 0.00 0.00 33.17 3.01
2175 2381 4.759693 TGTTAGAACATTGATGCGGAACTT 59.240 37.500 0.00 0.00 33.17 2.66
2189 2395 3.562557 GCGGAACTTAAAACAGGTCTTCA 59.437 43.478 0.00 0.00 30.40 3.02
2214 2422 2.427812 TCATCCGTGTAAGCATCGGTAA 59.572 45.455 0.00 0.00 43.94 2.85
2259 2467 1.180029 CTTTCATGGTTCAGGCCCAG 58.820 55.000 0.00 0.00 34.92 4.45
2274 2482 4.038402 CAGGCCCAGGTTTCATGATATTTC 59.962 45.833 0.00 0.00 0.00 2.17
2283 2491 5.334105 GGTTTCATGATATTTCCGATGGACG 60.334 44.000 0.00 0.00 42.18 4.79
2307 2517 5.185454 ACCACACACACATACATATTCAGG 58.815 41.667 0.00 0.00 0.00 3.86
2336 2546 6.481954 AATAGTGTTCAGATTCACGGAAAC 57.518 37.500 0.00 0.00 39.25 2.78
2359 2569 9.950680 AAACACTGAAACATGTCAAAACTATAG 57.049 29.630 0.00 0.00 0.00 1.31
2400 2612 6.317663 TCACATATATCATTAGCCAGCCAT 57.682 37.500 0.00 0.00 0.00 4.40
2408 2620 4.539726 TCATTAGCCAGCCATGAGAATTT 58.460 39.130 0.00 0.00 0.00 1.82
2449 2663 7.443259 ACCTGTAATTACGCATAACTTTGTT 57.557 32.000 10.92 0.00 0.00 2.83
2461 2675 1.680338 ACTTTGTTGAGACACCCTGC 58.320 50.000 0.00 0.00 34.98 4.85
2475 2689 1.325355 CCCTGCTATCATTTGCCAGG 58.675 55.000 0.00 0.00 0.00 4.45
2477 2691 1.395635 CTGCTATCATTTGCCAGGCA 58.604 50.000 11.22 11.22 36.47 4.75
2478 2692 1.066605 CTGCTATCATTTGCCAGGCAC 59.933 52.381 15.89 0.00 38.71 5.01
2479 2693 1.105457 GCTATCATTTGCCAGGCACA 58.895 50.000 15.89 8.63 38.71 4.57
2499 2713 4.840401 CAAGAATTGTGCAATGATGCTG 57.160 40.909 2.22 0.00 45.23 4.41
2500 2714 3.062099 CAAGAATTGTGCAATGATGCTGC 59.938 43.478 2.22 0.00 45.23 5.25
2501 2715 6.229901 CAAGAATTGTGCAATGATGCTGCG 62.230 45.833 2.22 0.00 45.23 5.18
2510 2724 3.818387 CAATGATGCTGCGATTGATACC 58.182 45.455 11.35 0.00 30.03 2.73
2565 2779 4.754667 GCCTCCACCCGTTCGGAC 62.755 72.222 13.08 0.00 34.64 4.79
2567 2781 2.048503 CTCCACCCGTTCGGACAC 60.049 66.667 13.08 0.00 34.64 3.67
2586 2800 2.294791 CACGGTGTTTATTTTCTGGCCA 59.705 45.455 4.71 4.71 0.00 5.36
2605 2819 4.423732 GCCAACTTTATACCAGCAACATG 58.576 43.478 0.00 0.00 0.00 3.21
2625 2839 3.431415 TGCATAGCATATACTCCTCCGT 58.569 45.455 0.00 0.00 31.71 4.69
2626 2840 3.832490 TGCATAGCATATACTCCTCCGTT 59.168 43.478 0.00 0.00 31.71 4.44
2627 2841 4.082190 TGCATAGCATATACTCCTCCGTTC 60.082 45.833 0.00 0.00 31.71 3.95
2628 2842 4.678309 GCATAGCATATACTCCTCCGTTCC 60.678 50.000 0.00 0.00 0.00 3.62
2629 2843 1.887198 AGCATATACTCCTCCGTTCCG 59.113 52.381 0.00 0.00 0.00 4.30
2630 2844 1.884579 GCATATACTCCTCCGTTCCGA 59.115 52.381 0.00 0.00 0.00 4.55
2631 2845 2.295349 GCATATACTCCTCCGTTCCGAA 59.705 50.000 0.00 0.00 0.00 4.30
2632 2846 3.243636 GCATATACTCCTCCGTTCCGAAA 60.244 47.826 0.00 0.00 0.00 3.46
2633 2847 4.560919 GCATATACTCCTCCGTTCCGAAAT 60.561 45.833 0.00 0.00 0.00 2.17
2634 2848 5.336213 GCATATACTCCTCCGTTCCGAAATA 60.336 44.000 0.00 0.00 0.00 1.40
2635 2849 6.627508 GCATATACTCCTCCGTTCCGAAATAT 60.628 42.308 0.00 0.00 0.00 1.28
2636 2850 5.803237 ATACTCCTCCGTTCCGAAATATT 57.197 39.130 0.00 0.00 0.00 1.28
2637 2851 4.482952 ACTCCTCCGTTCCGAAATATTT 57.517 40.909 0.00 0.00 0.00 1.40
2638 2852 4.189231 ACTCCTCCGTTCCGAAATATTTG 58.811 43.478 5.17 0.00 0.00 2.32
2639 2853 4.189231 CTCCTCCGTTCCGAAATATTTGT 58.811 43.478 5.17 0.00 0.00 2.83
2640 2854 4.186159 TCCTCCGTTCCGAAATATTTGTC 58.814 43.478 5.17 0.00 0.00 3.18
2641 2855 4.081309 TCCTCCGTTCCGAAATATTTGTCT 60.081 41.667 5.17 0.00 0.00 3.41
2642 2856 4.634443 CCTCCGTTCCGAAATATTTGTCTT 59.366 41.667 5.17 0.00 0.00 3.01
2643 2857 5.123344 CCTCCGTTCCGAAATATTTGTCTTT 59.877 40.000 5.17 0.00 0.00 2.52
2644 2858 6.349033 CCTCCGTTCCGAAATATTTGTCTTTT 60.349 38.462 5.17 0.00 0.00 2.27
2645 2859 6.972722 TCCGTTCCGAAATATTTGTCTTTTT 58.027 32.000 5.17 0.00 0.00 1.94
2646 2860 8.097078 TCCGTTCCGAAATATTTGTCTTTTTA 57.903 30.769 5.17 0.00 0.00 1.52
2647 2861 8.231837 TCCGTTCCGAAATATTTGTCTTTTTAG 58.768 33.333 5.17 0.00 0.00 1.85
2648 2862 8.231837 CCGTTCCGAAATATTTGTCTTTTTAGA 58.768 33.333 5.17 0.00 0.00 2.10
2649 2863 9.262472 CGTTCCGAAATATTTGTCTTTTTAGAG 57.738 33.333 5.17 0.00 0.00 2.43
2672 2886 8.353684 AGAGATTCAAATAGACTACCACATACG 58.646 37.037 0.00 0.00 0.00 3.06
2673 2887 7.434492 AGATTCAAATAGACTACCACATACGG 58.566 38.462 0.00 0.00 0.00 4.02
2674 2888 6.778834 TTCAAATAGACTACCACATACGGA 57.221 37.500 0.00 0.00 0.00 4.69
2675 2889 6.971726 TCAAATAGACTACCACATACGGAT 57.028 37.500 0.00 0.00 0.00 4.18
2676 2890 6.745116 TCAAATAGACTACCACATACGGATG 58.255 40.000 5.94 5.94 39.16 3.51
2678 2892 7.503230 TCAAATAGACTACCACATACGGATGTA 59.497 37.037 14.23 0.00 44.82 2.29
2679 2893 8.304596 CAAATAGACTACCACATACGGATGTAT 58.695 37.037 14.23 7.46 44.82 2.29
2680 2894 9.524496 AAATAGACTACCACATACGGATGTATA 57.476 33.333 14.23 8.27 44.82 1.47
2681 2895 9.696572 AATAGACTACCACATACGGATGTATAT 57.303 33.333 14.23 4.37 44.82 0.86
2683 2897 8.734218 AGACTACCACATACGGATGTATATAG 57.266 38.462 14.23 16.35 44.82 1.31
2684 2898 8.546322 AGACTACCACATACGGATGTATATAGA 58.454 37.037 22.62 5.04 44.82 1.98
2685 2899 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
2686 2900 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
2687 2901 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
2689 2903 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
2719 2933 9.331282 AGAGTGTATATTCACTTATTTTGCTCC 57.669 33.333 15.24 0.62 46.81 4.70
2720 2934 8.142994 AGTGTATATTCACTTATTTTGCTCCG 57.857 34.615 9.03 0.00 44.92 4.63
2721 2935 7.769044 AGTGTATATTCACTTATTTTGCTCCGT 59.231 33.333 9.03 0.00 44.92 4.69
2722 2936 9.037737 GTGTATATTCACTTATTTTGCTCCGTA 57.962 33.333 5.30 0.00 35.68 4.02
2723 2937 9.772973 TGTATATTCACTTATTTTGCTCCGTAT 57.227 29.630 0.00 0.00 0.00 3.06
2725 2939 8.677148 ATATTCACTTATTTTGCTCCGTATGT 57.323 30.769 0.00 0.00 0.00 2.29
2726 2940 9.772973 ATATTCACTTATTTTGCTCCGTATGTA 57.227 29.630 0.00 0.00 0.00 2.29
2727 2941 7.534085 TTCACTTATTTTGCTCCGTATGTAG 57.466 36.000 0.00 0.00 0.00 2.74
2728 2942 6.636705 TCACTTATTTTGCTCCGTATGTAGT 58.363 36.000 0.00 0.00 0.00 2.73
2729 2943 6.755141 TCACTTATTTTGCTCCGTATGTAGTC 59.245 38.462 0.00 0.00 0.00 2.59
2730 2944 6.533723 CACTTATTTTGCTCCGTATGTAGTCA 59.466 38.462 0.00 0.00 0.00 3.41
2731 2945 6.534079 ACTTATTTTGCTCCGTATGTAGTCAC 59.466 38.462 0.00 0.00 0.00 3.67
2732 2946 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
2733 2947 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
2734 2948 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
2735 2949 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
2736 2950 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
2737 2951 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
2738 2952 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
2739 2953 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
2740 2954 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
2741 2955 6.282167 TCCGTATGTAGTCACTTGTTGAAAA 58.718 36.000 0.00 0.00 35.39 2.29
2769 2983 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
2770 2984 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
2771 2985 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
2772 2986 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
2773 2987 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
2774 2988 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
2775 2989 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
2776 2990 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
2777 2991 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
2778 2992 6.416631 AATATTTAGGAACGGAGGGAGTAC 57.583 41.667 0.00 0.00 0.00 2.73
2779 2993 2.905415 TTAGGAACGGAGGGAGTACA 57.095 50.000 0.00 0.00 0.00 2.90
2780 2994 3.393426 TTAGGAACGGAGGGAGTACAT 57.607 47.619 0.00 0.00 0.00 2.29
2781 2995 2.249309 AGGAACGGAGGGAGTACATT 57.751 50.000 0.00 0.00 0.00 2.71
2782 2996 3.393426 AGGAACGGAGGGAGTACATTA 57.607 47.619 0.00 0.00 0.00 1.90
2783 2997 3.029570 AGGAACGGAGGGAGTACATTAC 58.970 50.000 0.00 0.00 0.00 1.89
2852 3067 7.766738 TGTGTATGTACATATCGTTCCAACATT 59.233 33.333 18.27 0.00 38.63 2.71
2856 3071 8.958119 ATGTACATATCGTTCCAACATTAACT 57.042 30.769 6.56 0.00 0.00 2.24
2878 3093 3.118702 TCGGTATGGAACGAAATAAGCCA 60.119 43.478 0.00 0.00 36.01 4.75
2882 3097 2.343101 TGGAACGAAATAAGCCAGTCG 58.657 47.619 0.00 0.00 39.37 4.18
2895 3110 1.226802 CAGTCGTCTCCATCCGCAG 60.227 63.158 0.00 0.00 0.00 5.18
2937 3152 5.787380 TGAGATTATCGACCATCTCCATTG 58.213 41.667 23.62 0.00 43.38 2.82
2945 3160 1.325355 CCATCTCCATTGCCCATCAC 58.675 55.000 0.00 0.00 0.00 3.06
2948 3163 2.440065 TCCATTGCCCATCACCGC 60.440 61.111 0.00 0.00 0.00 5.68
2962 3177 2.884207 CCGCGGTCGTCTTTAGGC 60.884 66.667 19.50 0.00 0.00 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.694628 GCATTTGATGGGCATTGGAGTA 59.305 45.455 0.00 0.00 0.00 2.59
44 45 9.289782 GATATACCTTTTGATCCACTGCTTTAT 57.710 33.333 0.00 0.00 0.00 1.40
151 153 1.626825 ACTTTCCTTAGGTGCGGCTTA 59.373 47.619 0.00 0.00 0.00 3.09
236 244 4.697352 CCAAATGATCGAAGTTGTCTCCTT 59.303 41.667 0.00 0.00 0.00 3.36
242 250 2.795329 AGCCCAAATGATCGAAGTTGT 58.205 42.857 0.00 0.00 0.00 3.32
254 262 6.294473 CAATCTGAGTCTGTATAGCCCAAAT 58.706 40.000 0.00 0.00 0.00 2.32
265 273 0.617413 CCTGCCCAATCTGAGTCTGT 59.383 55.000 0.00 0.00 0.00 3.41
282 290 4.430441 ACTTCCTATCCACTTTGTCTCCT 58.570 43.478 0.00 0.00 0.00 3.69
326 334 2.551459 CTCACCAAAGAGCAACCAAGAG 59.449 50.000 0.00 0.00 0.00 2.85
350 358 5.059833 CACAACTTTGCTTCTTAGAGGACT 58.940 41.667 0.00 0.00 0.00 3.85
354 362 5.525378 AGACACACAACTTTGCTTCTTAGAG 59.475 40.000 0.00 0.00 0.00 2.43
392 403 0.614979 ACCGACAGCCACATACTCCT 60.615 55.000 0.00 0.00 0.00 3.69
481 492 6.294176 GCACTTTCATTATCACACCAAAGAGT 60.294 38.462 0.00 0.00 0.00 3.24
516 527 1.278985 TGTTGCACCGGATTGAGAGAT 59.721 47.619 9.46 0.00 0.00 2.75
525 536 0.179234 TCTTGAAGTGTTGCACCGGA 59.821 50.000 9.46 0.00 34.49 5.14
558 569 4.072131 CCCGGATGAAATGATACCGAATT 58.928 43.478 0.73 0.00 45.31 2.17
570 581 3.747388 GCCTAATGTGATCCCGGATGAAA 60.747 47.826 4.08 0.00 0.00 2.69
639 650 3.945285 TCAAGGGCTTCGTGAAAATATCC 59.055 43.478 0.00 0.00 31.17 2.59
668 679 3.852286 TGCCTTAACTCGCGAAATCTTA 58.148 40.909 11.33 0.65 0.00 2.10
734 745 4.105057 TCAAGTTAAGTATGGTGGGGTGTT 59.895 41.667 0.00 0.00 0.00 3.32
750 761 6.072008 CCATTCAACCACATGACATCAAGTTA 60.072 38.462 0.00 0.00 0.00 2.24
762 773 4.927267 TCTCCTAACCATTCAACCACAT 57.073 40.909 0.00 0.00 0.00 3.21
766 777 5.710099 TCATTGTTCTCCTAACCATTCAACC 59.290 40.000 0.00 0.00 0.00 3.77
767 778 6.817765 TCATTGTTCTCCTAACCATTCAAC 57.182 37.500 0.00 0.00 0.00 3.18
768 779 9.699410 AATATCATTGTTCTCCTAACCATTCAA 57.301 29.630 0.00 0.00 0.00 2.69
769 780 9.699410 AAATATCATTGTTCTCCTAACCATTCA 57.301 29.630 0.00 0.00 0.00 2.57
772 783 9.699410 TGAAAATATCATTGTTCTCCTAACCAT 57.301 29.630 0.00 0.00 31.50 3.55
773 784 9.699410 ATGAAAATATCATTGTTCTCCTAACCA 57.301 29.630 0.00 0.00 46.85 3.67
812 823 9.507280 CGAACATCAATGTCAAAGCTAATAATT 57.493 29.630 0.00 0.00 40.80 1.40
813 824 7.645340 GCGAACATCAATGTCAAAGCTAATAAT 59.355 33.333 0.00 0.00 40.80 1.28
814 825 6.966632 GCGAACATCAATGTCAAAGCTAATAA 59.033 34.615 0.00 0.00 40.80 1.40
815 826 6.093357 TGCGAACATCAATGTCAAAGCTAATA 59.907 34.615 0.00 0.00 40.80 0.98
816 827 5.106197 TGCGAACATCAATGTCAAAGCTAAT 60.106 36.000 0.00 0.00 40.80 1.73
817 828 4.215185 TGCGAACATCAATGTCAAAGCTAA 59.785 37.500 0.00 0.00 40.80 3.09
818 829 3.750652 TGCGAACATCAATGTCAAAGCTA 59.249 39.130 0.00 0.00 40.80 3.32
819 830 2.553602 TGCGAACATCAATGTCAAAGCT 59.446 40.909 0.00 0.00 40.80 3.74
820 831 2.932498 TGCGAACATCAATGTCAAAGC 58.068 42.857 0.00 1.58 40.80 3.51
821 832 6.364165 AGAAAATGCGAACATCAATGTCAAAG 59.636 34.615 0.00 0.00 40.80 2.77
822 833 6.215121 AGAAAATGCGAACATCAATGTCAAA 58.785 32.000 0.00 0.00 40.80 2.69
823 834 5.771469 AGAAAATGCGAACATCAATGTCAA 58.229 33.333 0.00 0.00 40.80 3.18
824 835 5.375417 AGAAAATGCGAACATCAATGTCA 57.625 34.783 0.00 0.00 40.80 3.58
825 836 7.975866 ATTAGAAAATGCGAACATCAATGTC 57.024 32.000 0.00 0.00 40.80 3.06
826 837 8.761575 AAATTAGAAAATGCGAACATCAATGT 57.238 26.923 0.00 0.00 44.20 2.71
834 845 9.675553 GCTGAAATAAAATTAGAAAATGCGAAC 57.324 29.630 0.00 0.00 0.00 3.95
835 846 8.868916 GGCTGAAATAAAATTAGAAAATGCGAA 58.131 29.630 0.00 0.00 0.00 4.70
836 847 8.250332 AGGCTGAAATAAAATTAGAAAATGCGA 58.750 29.630 0.00 0.00 0.00 5.10
837 848 8.411318 AGGCTGAAATAAAATTAGAAAATGCG 57.589 30.769 0.00 0.00 0.00 4.73
850 861 9.995003 ACACATCATTAAAAAGGCTGAAATAAA 57.005 25.926 0.00 0.00 0.00 1.40
851 862 9.421806 CACACATCATTAAAAAGGCTGAAATAA 57.578 29.630 0.00 0.00 0.00 1.40
852 863 8.584157 ACACACATCATTAAAAAGGCTGAAATA 58.416 29.630 0.00 0.00 0.00 1.40
853 864 7.444299 ACACACATCATTAAAAAGGCTGAAAT 58.556 30.769 0.00 0.00 0.00 2.17
854 865 6.815089 ACACACATCATTAAAAAGGCTGAAA 58.185 32.000 0.00 0.00 0.00 2.69
855 866 6.403866 ACACACATCATTAAAAAGGCTGAA 57.596 33.333 0.00 0.00 0.00 3.02
856 867 6.403866 AACACACATCATTAAAAAGGCTGA 57.596 33.333 0.00 0.00 0.00 4.26
857 868 7.148755 GCTAAACACACATCATTAAAAAGGCTG 60.149 37.037 0.00 0.00 0.00 4.85
858 869 6.868339 GCTAAACACACATCATTAAAAAGGCT 59.132 34.615 0.00 0.00 0.00 4.58
859 870 6.183359 CGCTAAACACACATCATTAAAAAGGC 60.183 38.462 0.00 0.00 0.00 4.35
860 871 7.081349 TCGCTAAACACACATCATTAAAAAGG 58.919 34.615 0.00 0.00 0.00 3.11
861 872 7.271223 CCTCGCTAAACACACATCATTAAAAAG 59.729 37.037 0.00 0.00 0.00 2.27
862 873 7.081349 CCTCGCTAAACACACATCATTAAAAA 58.919 34.615 0.00 0.00 0.00 1.94
863 874 6.348950 CCCTCGCTAAACACACATCATTAAAA 60.349 38.462 0.00 0.00 0.00 1.52
864 875 5.123186 CCCTCGCTAAACACACATCATTAAA 59.877 40.000 0.00 0.00 0.00 1.52
865 876 4.634004 CCCTCGCTAAACACACATCATTAA 59.366 41.667 0.00 0.00 0.00 1.40
866 877 4.188462 CCCTCGCTAAACACACATCATTA 58.812 43.478 0.00 0.00 0.00 1.90
867 878 3.009723 CCCTCGCTAAACACACATCATT 58.990 45.455 0.00 0.00 0.00 2.57
868 879 2.632377 CCCTCGCTAAACACACATCAT 58.368 47.619 0.00 0.00 0.00 2.45
869 880 1.338674 CCCCTCGCTAAACACACATCA 60.339 52.381 0.00 0.00 0.00 3.07
870 881 1.066430 TCCCCTCGCTAAACACACATC 60.066 52.381 0.00 0.00 0.00 3.06
871 882 0.981183 TCCCCTCGCTAAACACACAT 59.019 50.000 0.00 0.00 0.00 3.21
872 883 0.320374 CTCCCCTCGCTAAACACACA 59.680 55.000 0.00 0.00 0.00 3.72
873 884 0.606604 TCTCCCCTCGCTAAACACAC 59.393 55.000 0.00 0.00 0.00 3.82
874 885 0.606604 GTCTCCCCTCGCTAAACACA 59.393 55.000 0.00 0.00 0.00 3.72
875 886 0.896226 AGTCTCCCCTCGCTAAACAC 59.104 55.000 0.00 0.00 0.00 3.32
876 887 1.640917 AAGTCTCCCCTCGCTAAACA 58.359 50.000 0.00 0.00 0.00 2.83
877 888 2.764439 AAAGTCTCCCCTCGCTAAAC 57.236 50.000 0.00 0.00 0.00 2.01
878 889 3.071892 TGAAAAAGTCTCCCCTCGCTAAA 59.928 43.478 0.00 0.00 0.00 1.85
879 890 2.635915 TGAAAAAGTCTCCCCTCGCTAA 59.364 45.455 0.00 0.00 0.00 3.09
880 891 2.253610 TGAAAAAGTCTCCCCTCGCTA 58.746 47.619 0.00 0.00 0.00 4.26
881 892 1.056660 TGAAAAAGTCTCCCCTCGCT 58.943 50.000 0.00 0.00 0.00 4.93
882 893 2.010497 GATGAAAAAGTCTCCCCTCGC 58.990 52.381 0.00 0.00 0.00 5.03
883 894 2.094182 TCGATGAAAAAGTCTCCCCTCG 60.094 50.000 0.00 0.00 0.00 4.63
884 895 3.611766 TCGATGAAAAAGTCTCCCCTC 57.388 47.619 0.00 0.00 0.00 4.30
885 896 4.576330 AATCGATGAAAAAGTCTCCCCT 57.424 40.909 0.00 0.00 0.00 4.79
886 897 6.055588 TCATAATCGATGAAAAAGTCTCCCC 58.944 40.000 0.00 0.00 41.80 4.81
898 909 7.254084 CGTCACAAACATCTTCATAATCGATGA 60.254 37.037 0.00 0.00 43.11 2.92
899 910 6.842780 CGTCACAAACATCTTCATAATCGATG 59.157 38.462 0.00 0.00 40.18 3.84
900 911 6.756542 TCGTCACAAACATCTTCATAATCGAT 59.243 34.615 0.00 0.00 0.00 3.59
901 912 6.034577 GTCGTCACAAACATCTTCATAATCGA 59.965 38.462 0.00 0.00 0.00 3.59
902 913 6.035005 AGTCGTCACAAACATCTTCATAATCG 59.965 38.462 0.00 0.00 0.00 3.34
903 914 7.295952 AGTCGTCACAAACATCTTCATAATC 57.704 36.000 0.00 0.00 0.00 1.75
904 915 7.672983 AAGTCGTCACAAACATCTTCATAAT 57.327 32.000 0.00 0.00 0.00 1.28
905 916 7.490962 AAAGTCGTCACAAACATCTTCATAA 57.509 32.000 0.00 0.00 0.00 1.90
906 917 8.771920 ATAAAGTCGTCACAAACATCTTCATA 57.228 30.769 0.00 0.00 0.00 2.15
907 918 7.387673 TGATAAAGTCGTCACAAACATCTTCAT 59.612 33.333 0.00 0.00 0.00 2.57
908 919 6.704050 TGATAAAGTCGTCACAAACATCTTCA 59.296 34.615 0.00 0.00 0.00 3.02
909 920 7.117241 TGATAAAGTCGTCACAAACATCTTC 57.883 36.000 0.00 0.00 0.00 2.87
910 921 7.490962 TTGATAAAGTCGTCACAAACATCTT 57.509 32.000 0.00 0.00 0.00 2.40
911 922 7.148407 GGATTGATAAAGTCGTCACAAACATCT 60.148 37.037 0.00 0.00 0.00 2.90
912 923 6.961554 GGATTGATAAAGTCGTCACAAACATC 59.038 38.462 0.00 0.00 0.00 3.06
913 924 6.429692 TGGATTGATAAAGTCGTCACAAACAT 59.570 34.615 0.00 0.00 0.00 2.71
914 925 5.760743 TGGATTGATAAAGTCGTCACAAACA 59.239 36.000 0.00 0.00 0.00 2.83
915 926 6.147164 TCTGGATTGATAAAGTCGTCACAAAC 59.853 38.462 0.00 0.00 0.00 2.93
916 927 6.227522 TCTGGATTGATAAAGTCGTCACAAA 58.772 36.000 0.00 0.00 0.00 2.83
917 928 5.789521 TCTGGATTGATAAAGTCGTCACAA 58.210 37.500 0.00 0.00 0.00 3.33
918 929 5.400066 TCTGGATTGATAAAGTCGTCACA 57.600 39.130 0.00 0.00 0.00 3.58
919 930 6.042777 TCATCTGGATTGATAAAGTCGTCAC 58.957 40.000 0.00 0.00 0.00 3.67
920 931 6.096846 TCTCATCTGGATTGATAAAGTCGTCA 59.903 38.462 0.00 0.00 0.00 4.35
921 932 6.507900 TCTCATCTGGATTGATAAAGTCGTC 58.492 40.000 0.00 0.00 0.00 4.20
922 933 6.471233 TCTCATCTGGATTGATAAAGTCGT 57.529 37.500 0.00 0.00 0.00 4.34
923 934 8.303156 AGTATCTCATCTGGATTGATAAAGTCG 58.697 37.037 0.00 0.00 0.00 4.18
927 938 9.828691 TCCTAGTATCTCATCTGGATTGATAAA 57.171 33.333 0.00 0.00 0.00 1.40
928 939 9.473007 CTCCTAGTATCTCATCTGGATTGATAA 57.527 37.037 0.00 0.00 0.00 1.75
929 940 8.619281 ACTCCTAGTATCTCATCTGGATTGATA 58.381 37.037 0.00 0.00 0.00 2.15
930 941 7.477864 ACTCCTAGTATCTCATCTGGATTGAT 58.522 38.462 0.00 0.00 0.00 2.57
931 942 6.857848 ACTCCTAGTATCTCATCTGGATTGA 58.142 40.000 0.00 0.00 0.00 2.57
932 943 7.377398 CAACTCCTAGTATCTCATCTGGATTG 58.623 42.308 0.00 0.00 0.00 2.67
933 944 6.014669 GCAACTCCTAGTATCTCATCTGGATT 60.015 42.308 0.00 0.00 0.00 3.01
934 945 5.480073 GCAACTCCTAGTATCTCATCTGGAT 59.520 44.000 0.00 0.00 0.00 3.41
935 946 4.830046 GCAACTCCTAGTATCTCATCTGGA 59.170 45.833 0.00 0.00 0.00 3.86
936 947 4.832266 AGCAACTCCTAGTATCTCATCTGG 59.168 45.833 0.00 0.00 0.00 3.86
937 948 5.334802 CGAGCAACTCCTAGTATCTCATCTG 60.335 48.000 0.00 0.00 30.78 2.90
938 949 4.759693 CGAGCAACTCCTAGTATCTCATCT 59.240 45.833 0.00 0.00 30.78 2.90
939 950 4.083003 CCGAGCAACTCCTAGTATCTCATC 60.083 50.000 0.00 0.00 30.78 2.92
940 951 3.823873 CCGAGCAACTCCTAGTATCTCAT 59.176 47.826 0.00 0.00 30.78 2.90
941 952 3.215151 CCGAGCAACTCCTAGTATCTCA 58.785 50.000 0.00 0.00 30.78 3.27
942 953 2.554893 CCCGAGCAACTCCTAGTATCTC 59.445 54.545 0.00 0.00 0.00 2.75
943 954 2.588620 CCCGAGCAACTCCTAGTATCT 58.411 52.381 0.00 0.00 0.00 1.98
944 955 1.000052 GCCCGAGCAACTCCTAGTATC 60.000 57.143 0.00 0.00 39.53 2.24
945 956 1.041437 GCCCGAGCAACTCCTAGTAT 58.959 55.000 0.00 0.00 39.53 2.12
946 957 2.501492 GCCCGAGCAACTCCTAGTA 58.499 57.895 0.00 0.00 39.53 1.82
947 958 3.300013 GCCCGAGCAACTCCTAGT 58.700 61.111 0.00 0.00 39.53 2.57
966 977 8.451748 CGCACTCACTTCTAGTATAAGCATATA 58.548 37.037 0.00 0.00 0.00 0.86
967 978 7.309177 CGCACTCACTTCTAGTATAAGCATAT 58.691 38.462 0.00 0.00 0.00 1.78
968 979 6.294010 CCGCACTCACTTCTAGTATAAGCATA 60.294 42.308 0.00 0.00 0.00 3.14
969 980 5.508153 CCGCACTCACTTCTAGTATAAGCAT 60.508 44.000 0.00 0.00 0.00 3.79
970 981 4.202020 CCGCACTCACTTCTAGTATAAGCA 60.202 45.833 0.00 0.00 0.00 3.91
971 982 4.291783 CCGCACTCACTTCTAGTATAAGC 58.708 47.826 0.00 0.00 0.00 3.09
972 983 4.338682 ACCCGCACTCACTTCTAGTATAAG 59.661 45.833 0.00 0.00 0.00 1.73
973 984 4.097437 CACCCGCACTCACTTCTAGTATAA 59.903 45.833 0.00 0.00 0.00 0.98
974 985 3.630769 CACCCGCACTCACTTCTAGTATA 59.369 47.826 0.00 0.00 0.00 1.47
975 986 2.427453 CACCCGCACTCACTTCTAGTAT 59.573 50.000 0.00 0.00 0.00 2.12
976 987 1.816835 CACCCGCACTCACTTCTAGTA 59.183 52.381 0.00 0.00 0.00 1.82
977 988 0.603569 CACCCGCACTCACTTCTAGT 59.396 55.000 0.00 0.00 0.00 2.57
978 989 0.108615 CCACCCGCACTCACTTCTAG 60.109 60.000 0.00 0.00 0.00 2.43
979 990 1.541310 CCCACCCGCACTCACTTCTA 61.541 60.000 0.00 0.00 0.00 2.10
980 991 2.743718 CCACCCGCACTCACTTCT 59.256 61.111 0.00 0.00 0.00 2.85
981 992 1.823169 TACCCACCCGCACTCACTTC 61.823 60.000 0.00 0.00 0.00 3.01
982 993 1.198759 ATACCCACCCGCACTCACTT 61.199 55.000 0.00 0.00 0.00 3.16
983 994 1.612442 ATACCCACCCGCACTCACT 60.612 57.895 0.00 0.00 0.00 3.41
984 995 1.449601 CATACCCACCCGCACTCAC 60.450 63.158 0.00 0.00 0.00 3.51
985 996 0.615261 TACATACCCACCCGCACTCA 60.615 55.000 0.00 0.00 0.00 3.41
986 997 0.756903 ATACATACCCACCCGCACTC 59.243 55.000 0.00 0.00 0.00 3.51
987 998 2.091098 TATACATACCCACCCGCACT 57.909 50.000 0.00 0.00 0.00 4.40
988 999 2.366266 TCTTATACATACCCACCCGCAC 59.634 50.000 0.00 0.00 0.00 5.34
989 1000 2.366266 GTCTTATACATACCCACCCGCA 59.634 50.000 0.00 0.00 0.00 5.69
990 1001 2.631545 AGTCTTATACATACCCACCCGC 59.368 50.000 0.00 0.00 0.00 6.13
991 1002 3.640029 ACAGTCTTATACATACCCACCCG 59.360 47.826 0.00 0.00 0.00 5.28
992 1003 5.625568 AACAGTCTTATACATACCCACCC 57.374 43.478 0.00 0.00 0.00 4.61
993 1004 8.042515 TGTTTAACAGTCTTATACATACCCACC 58.957 37.037 0.00 0.00 0.00 4.61
994 1005 9.609346 ATGTTTAACAGTCTTATACATACCCAC 57.391 33.333 3.63 0.00 29.20 4.61
995 1006 9.826574 GATGTTTAACAGTCTTATACATACCCA 57.173 33.333 3.63 0.00 30.47 4.51
996 1007 9.826574 TGATGTTTAACAGTCTTATACATACCC 57.173 33.333 3.63 0.00 30.47 3.69
1005 1016 9.781834 CTTTGTTTGTGATGTTTAACAGTCTTA 57.218 29.630 3.63 0.00 32.67 2.10
1006 1017 8.303876 ACTTTGTTTGTGATGTTTAACAGTCTT 58.696 29.630 3.63 0.00 32.67 3.01
1007 1018 7.826690 ACTTTGTTTGTGATGTTTAACAGTCT 58.173 30.769 3.63 0.00 32.67 3.24
1008 1019 9.006215 GTACTTTGTTTGTGATGTTTAACAGTC 57.994 33.333 3.63 2.78 32.67 3.51
1009 1020 8.736244 AGTACTTTGTTTGTGATGTTTAACAGT 58.264 29.630 3.63 0.00 32.67 3.55
1010 1021 9.567848 AAGTACTTTGTTTGTGATGTTTAACAG 57.432 29.630 1.12 0.00 32.67 3.16
1011 1022 9.347934 CAAGTACTTTGTTTGTGATGTTTAACA 57.652 29.630 5.07 0.00 31.92 2.41
1027 1038 8.973835 TTTCTTTTGGTTGTACAAGTACTTTG 57.026 30.769 8.98 4.54 42.68 2.77
1028 1039 7.758076 GCTTTCTTTTGGTTGTACAAGTACTTT 59.242 33.333 8.98 0.62 37.00 2.66
1031 1043 6.557110 TGCTTTCTTTTGGTTGTACAAGTAC 58.443 36.000 8.98 3.28 36.63 2.73
1053 1065 4.252130 CGTGATTTTGTTCGTGTTTTTGC 58.748 39.130 0.00 0.00 0.00 3.68
1075 1089 4.520846 CTCGTTTGCCATCGCGCC 62.521 66.667 0.00 0.00 38.08 6.53
1387 1407 0.846870 AGGAAAGGGAAGAGGGGTGG 60.847 60.000 0.00 0.00 0.00 4.61
1409 1429 1.754234 CTGATTTGGCCTTCGGGGG 60.754 63.158 3.32 0.00 35.16 5.40
1450 1471 7.277319 GCAGATAGATCATTTAGCGATCATCAA 59.723 37.037 0.00 0.00 41.49 2.57
1453 1474 6.047870 GGCAGATAGATCATTTAGCGATCAT 58.952 40.000 0.00 0.00 41.49 2.45
1455 1476 4.808364 GGGCAGATAGATCATTTAGCGATC 59.192 45.833 0.00 0.00 39.71 3.69
1457 1478 3.055819 GGGGCAGATAGATCATTTAGCGA 60.056 47.826 0.00 0.00 0.00 4.93
1469 1490 5.654497 GTTTTCATTTTCTGGGGCAGATAG 58.346 41.667 0.00 0.00 40.39 2.08
1496 1649 3.863424 GCTACCGAGAAATCAATCACGAA 59.137 43.478 0.00 0.00 35.78 3.85
1576 1729 9.309516 CCGTAAACTAATAGAGCATTTAGAACA 57.690 33.333 0.00 0.00 31.36 3.18
1577 1730 9.525409 TCCGTAAACTAATAGAGCATTTAGAAC 57.475 33.333 0.00 0.00 31.36 3.01
1578 1731 9.745880 CTCCGTAAACTAATAGAGCATTTAGAA 57.254 33.333 0.00 0.00 31.36 2.10
1579 1732 8.358148 CCTCCGTAAACTAATAGAGCATTTAGA 58.642 37.037 0.00 0.00 31.36 2.10
1580 1733 7.599245 CCCTCCGTAAACTAATAGAGCATTTAG 59.401 40.741 0.00 0.00 0.00 1.85
1581 1734 7.288389 TCCCTCCGTAAACTAATAGAGCATTTA 59.712 37.037 0.00 0.00 0.00 1.40
1582 1735 6.099269 TCCCTCCGTAAACTAATAGAGCATTT 59.901 38.462 0.00 0.00 0.00 2.32
1583 1736 5.601313 TCCCTCCGTAAACTAATAGAGCATT 59.399 40.000 0.00 0.00 0.00 3.56
1584 1737 5.145564 TCCCTCCGTAAACTAATAGAGCAT 58.854 41.667 0.00 0.00 0.00 3.79
1585 1738 4.539726 TCCCTCCGTAAACTAATAGAGCA 58.460 43.478 0.00 0.00 0.00 4.26
1586 1739 4.583907 ACTCCCTCCGTAAACTAATAGAGC 59.416 45.833 0.00 0.00 0.00 4.09
1587 1740 7.222872 TCTACTCCCTCCGTAAACTAATAGAG 58.777 42.308 0.00 0.00 0.00 2.43
1588 1741 7.141758 TCTACTCCCTCCGTAAACTAATAGA 57.858 40.000 0.00 0.00 0.00 1.98
1589 1742 7.814264 TTCTACTCCCTCCGTAAACTAATAG 57.186 40.000 0.00 0.00 0.00 1.73
1590 1743 7.449704 GGATTCTACTCCCTCCGTAAACTAATA 59.550 40.741 0.00 0.00 0.00 0.98
1591 1744 6.267242 GGATTCTACTCCCTCCGTAAACTAAT 59.733 42.308 0.00 0.00 0.00 1.73
1592 1745 5.595952 GGATTCTACTCCCTCCGTAAACTAA 59.404 44.000 0.00 0.00 0.00 2.24
1593 1746 5.103771 AGGATTCTACTCCCTCCGTAAACTA 60.104 44.000 0.00 0.00 35.79 2.24
1594 1747 3.959449 GGATTCTACTCCCTCCGTAAACT 59.041 47.826 0.00 0.00 0.00 2.66
1595 1748 3.959449 AGGATTCTACTCCCTCCGTAAAC 59.041 47.826 0.00 0.00 35.79 2.01
1596 1749 3.958798 CAGGATTCTACTCCCTCCGTAAA 59.041 47.826 0.00 0.00 35.79 2.01
1597 1750 3.203710 TCAGGATTCTACTCCCTCCGTAA 59.796 47.826 0.00 0.00 35.79 3.18
1598 1751 2.781757 TCAGGATTCTACTCCCTCCGTA 59.218 50.000 0.00 0.00 35.79 4.02
1599 1752 1.569548 TCAGGATTCTACTCCCTCCGT 59.430 52.381 0.00 0.00 35.79 4.69
1600 1753 2.366640 TCAGGATTCTACTCCCTCCG 57.633 55.000 0.00 0.00 35.79 4.63
1601 1754 7.676468 AGTTATAATCAGGATTCTACTCCCTCC 59.324 40.741 0.00 0.00 35.79 4.30
1602 1755 8.527810 CAGTTATAATCAGGATTCTACTCCCTC 58.472 40.741 0.00 0.00 35.79 4.30
1603 1756 8.013667 ACAGTTATAATCAGGATTCTACTCCCT 58.986 37.037 0.00 0.00 35.79 4.20
1604 1757 8.196378 ACAGTTATAATCAGGATTCTACTCCC 57.804 38.462 0.00 0.00 35.79 4.30
1605 1758 9.699703 GAACAGTTATAATCAGGATTCTACTCC 57.300 37.037 0.00 0.00 35.37 3.85
1608 1761 9.400638 CGAGAACAGTTATAATCAGGATTCTAC 57.599 37.037 0.00 0.00 32.50 2.59
1609 1762 8.082852 GCGAGAACAGTTATAATCAGGATTCTA 58.917 37.037 0.00 0.00 32.50 2.10
1610 1763 6.926272 GCGAGAACAGTTATAATCAGGATTCT 59.074 38.462 0.00 0.00 32.50 2.40
1611 1764 6.129062 CGCGAGAACAGTTATAATCAGGATTC 60.129 42.308 0.00 0.00 32.50 2.52
1648 1801 8.530804 AAAGATCAAATCCCCTAAATCTTGAG 57.469 34.615 0.00 0.00 34.59 3.02
1680 1837 1.481772 TGGCCCAGATAAAAATGCTGC 59.518 47.619 0.00 0.00 0.00 5.25
1741 1898 5.900789 GCTCGAAAATGAGATCATCGAAAAG 59.099 40.000 8.01 0.40 38.28 2.27
1749 1906 8.417106 AGAACTATTAGCTCGAAAATGAGATCA 58.583 33.333 0.00 0.00 38.28 2.92
1813 1971 3.260483 CAGACGATCGCAGGCAGC 61.260 66.667 16.60 0.00 40.87 5.25
1814 1972 1.153765 TTCAGACGATCGCAGGCAG 60.154 57.895 16.60 0.00 0.00 4.85
1815 1973 1.446099 GTTCAGACGATCGCAGGCA 60.446 57.895 16.60 0.00 0.00 4.75
1816 1974 0.807667 ATGTTCAGACGATCGCAGGC 60.808 55.000 16.60 2.21 0.00 4.85
1817 1975 1.645034 AATGTTCAGACGATCGCAGG 58.355 50.000 16.60 4.48 0.00 4.85
1822 1984 6.428385 AGGAATCAAAATGTTCAGACGATC 57.572 37.500 0.00 0.00 0.00 3.69
1830 1992 3.191371 ACAGCCGAGGAATCAAAATGTTC 59.809 43.478 0.00 0.00 0.00 3.18
1839 2001 0.537188 TCAGGAACAGCCGAGGAATC 59.463 55.000 0.00 0.00 43.43 2.52
1844 2006 2.266055 GGGTCAGGAACAGCCGAG 59.734 66.667 0.00 0.00 43.43 4.63
1854 2017 0.393537 GAACAGGCATCAGGGTCAGG 60.394 60.000 0.00 0.00 0.00 3.86
1877 2040 0.033504 AGGTACGTGTCCTGCAGTTG 59.966 55.000 13.81 0.00 33.62 3.16
1995 2161 1.953686 GTTGCCACAGCTTTTGAGGTA 59.046 47.619 0.00 0.00 39.49 3.08
2036 2209 7.894753 TGATCAATTGGGCAACTGATTATTA 57.105 32.000 5.42 0.00 37.39 0.98
2069 2242 3.799755 GCTTACAAGGGGCGCGTG 61.800 66.667 15.39 15.39 0.00 5.34
2107 2280 3.187700 GGATGACGTCAATCTTAAGCGT 58.812 45.455 24.13 0.75 38.55 5.07
2108 2281 3.186909 TGGATGACGTCAATCTTAAGCG 58.813 45.455 24.13 0.00 0.00 4.68
2119 2292 4.332543 TGATGCTTTTACATGGATGACGTC 59.667 41.667 9.11 9.11 0.00 4.34
2121 2294 4.880886 TGATGCTTTTACATGGATGACG 57.119 40.909 0.00 0.00 0.00 4.35
2123 2296 4.201940 CGCTTGATGCTTTTACATGGATGA 60.202 41.667 0.00 0.00 40.11 2.92
2127 2300 2.164219 ACCGCTTGATGCTTTTACATGG 59.836 45.455 0.00 0.00 40.11 3.66
2174 2380 7.013846 ACGGATGAAAATGAAGACCTGTTTTAA 59.986 33.333 0.00 0.00 0.00 1.52
2175 2381 6.488683 ACGGATGAAAATGAAGACCTGTTTTA 59.511 34.615 0.00 0.00 0.00 1.52
2189 2395 4.536364 CGATGCTTACACGGATGAAAAT 57.464 40.909 0.00 0.00 0.00 1.82
2214 2422 2.745281 CACCGAATATGTGTTTCCGGTT 59.255 45.455 0.00 0.00 31.94 4.44
2259 2467 5.334105 CGTCCATCGGAAATATCATGAAACC 60.334 44.000 0.00 0.00 31.38 3.27
2274 2482 1.736645 GTGTGTGGTCGTCCATCGG 60.737 63.158 4.29 0.00 46.20 4.18
2283 2491 5.294306 CCTGAATATGTATGTGTGTGTGGTC 59.706 44.000 0.00 0.00 0.00 4.02
2307 2517 3.938963 TGAATCTGAACACTATTTCGCCC 59.061 43.478 0.00 0.00 0.00 6.13
2336 2546 9.599322 GTTCTATAGTTTTGACATGTTTCAGTG 57.401 33.333 0.00 0.00 0.00 3.66
2374 2584 7.177184 TGGCTGGCTAATGATATATGTGAAAT 58.823 34.615 2.00 0.00 0.00 2.17
2378 2588 6.117488 TCATGGCTGGCTAATGATATATGTG 58.883 40.000 2.00 0.00 0.00 3.21
2379 2589 6.157471 TCTCATGGCTGGCTAATGATATATGT 59.843 38.462 2.00 0.00 30.31 2.29
2380 2590 6.589135 TCTCATGGCTGGCTAATGATATATG 58.411 40.000 2.00 0.00 30.31 1.78
2381 2591 6.819947 TCTCATGGCTGGCTAATGATATAT 57.180 37.500 2.00 0.00 30.31 0.86
2382 2592 6.625532 TTCTCATGGCTGGCTAATGATATA 57.374 37.500 2.00 0.00 30.31 0.86
2391 2603 1.206371 GCAAAATTCTCATGGCTGGCT 59.794 47.619 2.00 0.00 0.00 4.75
2400 2612 9.120538 GTATCCCTTAGTATTGCAAAATTCTCA 57.879 33.333 1.71 0.00 0.00 3.27
2408 2620 5.968676 ACAGGTATCCCTTAGTATTGCAA 57.031 39.130 0.00 0.00 39.89 4.08
2427 2641 8.440059 TCTCAACAAAGTTATGCGTAATTACAG 58.560 33.333 15.67 9.24 0.00 2.74
2436 2650 3.364964 GGGTGTCTCAACAAAGTTATGCG 60.365 47.826 0.00 0.00 37.08 4.73
2449 2663 3.877559 CAAATGATAGCAGGGTGTCTCA 58.122 45.455 0.00 0.00 0.00 3.27
2461 2675 3.018856 TCTTGTGCCTGGCAAATGATAG 58.981 45.455 25.23 12.47 41.47 2.08
2489 2703 3.365666 GGGTATCAATCGCAGCATCATTG 60.366 47.826 0.00 0.00 0.00 2.82
2494 2708 0.250901 GGGGGTATCAATCGCAGCAT 60.251 55.000 0.00 0.00 0.00 3.79
2498 2712 4.380843 AATTATGGGGGTATCAATCGCA 57.619 40.909 0.00 0.00 0.00 5.10
2499 2713 7.051623 TGTATAATTATGGGGGTATCAATCGC 58.948 38.462 8.28 0.00 0.00 4.58
2507 2721 9.624037 ACTGAGTTATGTATAATTATGGGGGTA 57.376 33.333 8.28 0.00 0.00 3.69
2508 2722 8.520119 ACTGAGTTATGTATAATTATGGGGGT 57.480 34.615 8.28 0.00 0.00 4.95
2509 2723 9.231297 CAACTGAGTTATGTATAATTATGGGGG 57.769 37.037 8.28 0.00 0.00 5.40
2510 2724 9.793259 ACAACTGAGTTATGTATAATTATGGGG 57.207 33.333 8.28 0.00 0.00 4.96
2561 2775 3.364565 CCAGAAAATAAACACCGTGTCCG 60.365 47.826 4.23 0.00 0.00 4.79
2565 2779 2.294791 TGGCCAGAAAATAAACACCGTG 59.705 45.455 0.00 0.00 0.00 4.94
2567 2781 3.005367 AGTTGGCCAGAAAATAAACACCG 59.995 43.478 5.11 0.00 0.00 4.94
2586 2800 5.920193 ATGCATGTTGCTGGTATAAAGTT 57.080 34.783 0.00 0.00 45.31 2.66
2605 2819 4.425520 GAACGGAGGAGTATATGCTATGC 58.574 47.826 0.00 0.00 0.00 3.14
2646 2860 8.353684 CGTATGTGGTAGTCTATTTGAATCTCT 58.646 37.037 0.00 0.00 0.00 3.10
2647 2861 7.595502 CCGTATGTGGTAGTCTATTTGAATCTC 59.404 40.741 0.00 0.00 0.00 2.75
2648 2862 7.287005 TCCGTATGTGGTAGTCTATTTGAATCT 59.713 37.037 0.00 0.00 0.00 2.40
2649 2863 7.431249 TCCGTATGTGGTAGTCTATTTGAATC 58.569 38.462 0.00 0.00 0.00 2.52
2650 2864 7.356089 TCCGTATGTGGTAGTCTATTTGAAT 57.644 36.000 0.00 0.00 0.00 2.57
2651 2865 6.778834 TCCGTATGTGGTAGTCTATTTGAA 57.221 37.500 0.00 0.00 0.00 2.69
2652 2866 6.322969 ACATCCGTATGTGGTAGTCTATTTGA 59.677 38.462 0.00 0.00 44.79 2.69
2653 2867 6.513180 ACATCCGTATGTGGTAGTCTATTTG 58.487 40.000 0.00 0.00 44.79 2.32
2654 2868 6.726490 ACATCCGTATGTGGTAGTCTATTT 57.274 37.500 0.00 0.00 44.79 1.40
2655 2869 9.696572 ATATACATCCGTATGTGGTAGTCTATT 57.303 33.333 3.56 0.00 45.99 1.73
2657 2871 9.828039 CTATATACATCCGTATGTGGTAGTCTA 57.172 37.037 3.56 0.00 45.99 2.59
2658 2872 8.546322 TCTATATACATCCGTATGTGGTAGTCT 58.454 37.037 3.56 0.00 45.99 3.24
2659 2873 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
2660 2874 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
2661 2875 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
2663 2877 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
2696 2910 7.916552 ACGGAGCAAAATAAGTGAATATACAC 58.083 34.615 0.00 0.00 40.60 2.90
2697 2911 9.772973 ATACGGAGCAAAATAAGTGAATATACA 57.227 29.630 0.00 0.00 0.00 2.29
2699 2913 9.772973 ACATACGGAGCAAAATAAGTGAATATA 57.227 29.630 0.00 0.00 0.00 0.86
2700 2914 8.677148 ACATACGGAGCAAAATAAGTGAATAT 57.323 30.769 0.00 0.00 0.00 1.28
2701 2915 9.256477 CTACATACGGAGCAAAATAAGTGAATA 57.744 33.333 0.00 0.00 0.00 1.75
2702 2916 7.769044 ACTACATACGGAGCAAAATAAGTGAAT 59.231 33.333 0.00 0.00 0.00 2.57
2703 2917 7.101054 ACTACATACGGAGCAAAATAAGTGAA 58.899 34.615 0.00 0.00 0.00 3.18
2704 2918 6.636705 ACTACATACGGAGCAAAATAAGTGA 58.363 36.000 0.00 0.00 0.00 3.41
2705 2919 6.533723 TGACTACATACGGAGCAAAATAAGTG 59.466 38.462 0.00 0.00 0.00 3.16
2706 2920 6.534079 GTGACTACATACGGAGCAAAATAAGT 59.466 38.462 0.00 0.00 0.00 2.24
2707 2921 6.757010 AGTGACTACATACGGAGCAAAATAAG 59.243 38.462 0.00 0.00 0.00 1.73
2708 2922 6.636705 AGTGACTACATACGGAGCAAAATAA 58.363 36.000 0.00 0.00 0.00 1.40
2709 2923 6.216801 AGTGACTACATACGGAGCAAAATA 57.783 37.500 0.00 0.00 0.00 1.40
2710 2924 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
2711 2925 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
2712 2926 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
2713 2927 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
2714 2928 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
2715 2929 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
2716 2930 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
2717 2931 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
2718 2932 6.202188 AGTTTTCAACAAGTGACTACATACGG 59.798 38.462 0.00 0.00 35.39 4.02
2719 2933 7.169308 AGAGTTTTCAACAAGTGACTACATACG 59.831 37.037 0.00 0.00 35.39 3.06
2720 2934 8.366671 AGAGTTTTCAACAAGTGACTACATAC 57.633 34.615 0.00 0.00 35.39 2.39
2721 2935 9.692749 CTAGAGTTTTCAACAAGTGACTACATA 57.307 33.333 0.00 0.00 35.39 2.29
2722 2936 8.421784 TCTAGAGTTTTCAACAAGTGACTACAT 58.578 33.333 0.00 0.00 35.39 2.29
2723 2937 7.778083 TCTAGAGTTTTCAACAAGTGACTACA 58.222 34.615 0.00 0.00 35.39 2.74
2724 2938 8.644318 TTCTAGAGTTTTCAACAAGTGACTAC 57.356 34.615 0.00 0.00 35.39 2.73
2725 2939 9.314321 CTTTCTAGAGTTTTCAACAAGTGACTA 57.686 33.333 0.00 0.00 35.39 2.59
2726 2940 8.041323 TCTTTCTAGAGTTTTCAACAAGTGACT 58.959 33.333 0.00 0.00 35.39 3.41
2727 2941 8.117370 GTCTTTCTAGAGTTTTCAACAAGTGAC 58.883 37.037 0.00 0.00 35.39 3.67
2728 2942 7.822334 TGTCTTTCTAGAGTTTTCAACAAGTGA 59.178 33.333 0.00 0.00 0.00 3.41
2729 2943 7.974675 TGTCTTTCTAGAGTTTTCAACAAGTG 58.025 34.615 0.00 0.00 0.00 3.16
2730 2944 8.561738 TTGTCTTTCTAGAGTTTTCAACAAGT 57.438 30.769 0.00 0.00 0.00 3.16
2743 2957 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
2744 2958 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
2745 2959 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
2746 2960 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
2747 2961 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
2748 2962 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2749 2963 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2750 2964 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2751 2965 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2752 2966 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
2753 2967 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2754 2968 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2755 2969 5.901276 TGTACTCCCTCCGTTCCTAAATATT 59.099 40.000 0.00 0.00 0.00 1.28
2756 2970 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
2757 2971 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
2758 2972 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
2759 2973 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
2760 2974 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
2761 2975 3.393426 AATGTACTCCCTCCGTTCCTA 57.607 47.619 0.00 0.00 0.00 2.94
2762 2976 2.249309 AATGTACTCCCTCCGTTCCT 57.751 50.000 0.00 0.00 0.00 3.36
2763 2977 2.762327 TGTAATGTACTCCCTCCGTTCC 59.238 50.000 0.00 0.00 0.00 3.62
2764 2978 4.460948 TTGTAATGTACTCCCTCCGTTC 57.539 45.455 0.00 0.00 0.00 3.95
2765 2979 5.422970 TGTATTGTAATGTACTCCCTCCGTT 59.577 40.000 0.00 0.00 0.00 4.44
2766 2980 4.957954 TGTATTGTAATGTACTCCCTCCGT 59.042 41.667 0.00 0.00 0.00 4.69
2767 2981 5.524971 TGTATTGTAATGTACTCCCTCCG 57.475 43.478 0.00 0.00 0.00 4.63
2768 2982 6.646267 TGTTGTATTGTAATGTACTCCCTCC 58.354 40.000 0.00 0.00 0.00 4.30
2769 2983 7.254795 GCATGTTGTATTGTAATGTACTCCCTC 60.255 40.741 0.00 0.00 0.00 4.30
2770 2984 6.542370 GCATGTTGTATTGTAATGTACTCCCT 59.458 38.462 0.00 0.00 0.00 4.20
2771 2985 6.238648 GGCATGTTGTATTGTAATGTACTCCC 60.239 42.308 0.00 0.00 0.00 4.30
2772 2986 6.542370 AGGCATGTTGTATTGTAATGTACTCC 59.458 38.462 0.00 0.00 0.00 3.85
2773 2987 7.553881 AGGCATGTTGTATTGTAATGTACTC 57.446 36.000 0.00 0.00 0.00 2.59
2774 2988 7.609918 TGAAGGCATGTTGTATTGTAATGTACT 59.390 33.333 0.00 0.00 0.00 2.73
2775 2989 7.757526 TGAAGGCATGTTGTATTGTAATGTAC 58.242 34.615 0.00 0.00 0.00 2.90
2776 2990 7.929941 TGAAGGCATGTTGTATTGTAATGTA 57.070 32.000 0.00 0.00 0.00 2.29
2777 2991 6.832520 TGAAGGCATGTTGTATTGTAATGT 57.167 33.333 0.00 0.00 0.00 2.71
2778 2992 6.531240 GGTTGAAGGCATGTTGTATTGTAATG 59.469 38.462 0.00 0.00 0.00 1.90
2779 2993 6.350949 GGGTTGAAGGCATGTTGTATTGTAAT 60.351 38.462 0.00 0.00 0.00 1.89
2780 2994 5.047660 GGGTTGAAGGCATGTTGTATTGTAA 60.048 40.000 0.00 0.00 0.00 2.41
2781 2995 4.461081 GGGTTGAAGGCATGTTGTATTGTA 59.539 41.667 0.00 0.00 0.00 2.41
2782 2996 3.258123 GGGTTGAAGGCATGTTGTATTGT 59.742 43.478 0.00 0.00 0.00 2.71
2783 2997 3.673052 CGGGTTGAAGGCATGTTGTATTG 60.673 47.826 0.00 0.00 0.00 1.90
2852 3067 5.750067 GCTTATTTCGTTCCATACCGAGTTA 59.250 40.000 0.00 0.00 34.16 2.24
2856 3071 3.118702 TGGCTTATTTCGTTCCATACCGA 60.119 43.478 0.00 0.00 0.00 4.69
2878 3093 3.069980 GCTGCGGATGGAGACGACT 62.070 63.158 0.00 0.00 35.14 4.18
2882 3097 2.175878 ATTATGCTGCGGATGGAGAC 57.824 50.000 0.00 0.00 35.14 3.36
2895 3110 5.485620 TCTCATCACAGGCTGATATTATGC 58.514 41.667 23.66 0.00 37.53 3.14
2945 3160 2.884207 GCCTAAAGACGACCGCGG 60.884 66.667 26.86 26.86 43.17 6.46
2948 3163 1.804326 CACCGCCTAAAGACGACCG 60.804 63.158 0.00 0.00 0.00 4.79
2952 3167 2.740714 GCAGCACCGCCTAAAGACG 61.741 63.158 0.00 0.00 0.00 4.18
2954 3169 1.079127 GAGCAGCACCGCCTAAAGA 60.079 57.895 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.