>input_sequence_64010
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--------------------------------------------------ATGTATAAGACTGTTAAACATCACAAACAA
-AGTACTTGTACAACCAAAAGAAAGCAAAAACACGAACA--AAATCACGGCGCGATGGCAAACGAGCGCAGCGCCGGCGA
---GGAGCGTGGAGCGGC---GGACAGCGTCGTGTGGAGGGAGGAGGCGGGGAAGTTCGAGACGCCCGACGGCGAGGCCT
TCCTCCAGTACCGCCTCGTCGTTCAGCCACGCGCCTCCTCCGGCGGCGGCGGCGCGTCCCCGGCGGCGATGGACATGGTG
CACACGTACGTGCCCGGGAGCAAGCGCGGGCAGGGGCTCGCCGCGCGCCTCTGCGACGCCGCCTTCGCCCACGCGCGGCG
CCACGGCATGCGCGTCATCCCCACCTGCTCCTACATCTCGGTACGGCCACCCCTCTTCCCTTTCCTCTCCCC-CGAAGGC
CAAATCAGCTCTTGCTCCGTGAGTTTCTCGTTGATGATCGCTAAATGATCTATCTGCCCCAGAAAATGA-----------
--------------------------------------------------------------------------------
-----------------------------------------AAACGGATTCGTGATTGATTTCTCGGTAGCGATAAGCAA
AATACTCCTCTGTAAACTAATATAAGAACGATTGGATCACTATTTTAGTGTTCTAAATGCTCTATTAGTTTACGGAGGGA
GTAGAATCCTGATTATAACTGTTCTCGCGTAGACTCGCGACTCAAGATTTAGGGGAT----TTGATCTTTTTCAGGGCAG
CATTTTTATCTGGGCCATAACTTCAGCTACAGCTTGGCTATGTCTACATGAACATTCCTTTTCGATGATCT-CATTTTCG
AGCTAATAGTTCTTCAGCTCGTCTCAAAACAAGTTGTTGAACTGCTTGGGGCTGC----CTGCGATCGTCTGAACATTTT
GATTCCTCG-GCTGTTCCTGACCCTGATGCCTGTTCCCTCAACTGCAGGACACGTACCTCCCTCGCAATCCGGCGTGGAA
CGATCTTGTCTACAAGGCTGACGAGCCCAAACACAGCAGCACCAGCAGTAGCATGTA---G-------------------
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>chr2B_1_TraesCS2B01G320200
TACTCCAATGCCCATCAAATGCCAACTTGACATAGATCCCAATGATAAAGCAGTGGATCAAAA-GGTATATCGCTCCATG
ATTGGCTCCTTGCTTTACCTTTGTGCATCTAGACCGGATATCATGTTGAGTGTGGAAATTTGTGCACGGTTTTAAGCCGC
ACCTAAGGAAAGTCACTTTATGGCGGTCAAGCGAATCTTTCGATATTTGGCTCATACCCCAAACTT------ATGGTACC
CAAAAGGAGACAACTTCGATCATTTGGGCTATACAGACTCAGATTGGGCAGGAGACAAAGTGGATAGGAAGTCCACCTCC
GGAGGGTGCCAATCTCTTGGTTGCTCTTTGGTGAGTTAGTCCTCTAAGAAGCAAAGTTGTGTGTCTCTCTC---CACCGA
AGAGGAGTATGTGGCTGTCGGTAGTTGTTGTGCTCAACTTCTATGGATGAGGCAAACTTTGAAGGATTACAGTGTCATTT
GTGACGAAGTGACTCTTTGGTGTGATAATGAAAGTGCCATCAAGATATCTCTCAATCCGGTGCAACACTTCAAGACGAAG
CATATTGAAATTCGGTATCATTTCATCCGGGATCACATTAGGCGAGGGGAGATCAAGCTCAAGTATGTCAACACTCATGA
TAACCTTGAGGATATTTTCACGAAGCCCTTGAATGAAGTAAGATTTCGCGAGTTAAGGCATGAGCTAAATACCATTGATT
CGAGCAATGTAGCTTGAACTCTTGAACACCCCACCATACTTAACTTGATGTCATGTGGTTGAATGGTTAGGAGAACAATG
ATATTTTCATCCATCAGAGTTTAATTATTAGCTTTGACATTGATGTTCGCATTTTCTAATTTTATTTCAGCCTTTTTAAT
GATGTGTGTTTAGCGAGGGGAGACTTTTTCATCGATTATGAAGATGTTTGTGACGACTTTATCAATCCAGATGAGATACT
AGGAGTTGCTCGGGCATATATGCTTATACTAGAAGTGAGTGCGGGTGGGTATGTATAAGACTGTTAAACATCACAAACAA
-AGTACTTGTACAACCAAAAGAAAGCAAAAACACGAACA--AAATCACGGCGCGATGGCAAACGAGCGCAGCGCCGGCGA
---GGAGCGTGGAGCGGC---GGACAGCGTCGTGTGGAGGGAGGAGGCGGGGAAGTTCGAGACGCCCGACGGCGAGGCCT
TCCTCCAGTACCGCCTCGTCGTTCAGCCACGCGCCTCCTCCGGCGGCGGCGGCGCGTCCCCGGCGGCGATGGACATGGTG
CACACGTACGTGCCCGGGAGCAAGCGCGGGCAGGGGCTCGCCGCGCGCCTCTGCGACGCCGCCTTCGCCCACGCGCGGCG
CCACGGCATGCGCGTCATCCCCACCTGCTCCTACATCTCGGTACGGCCACCCCTCTTCCCTTTCCTCTCCCC-CGAAGGC
CAAATCAGCTCTTGCTCCGTGAGTTTCTCGTTGATGATCGCTAAATGATCTATCTGCCCCAGAAAATGA-----------
--------------------------------------------------------------------------------
-----------------------------------------AAACGGATTCGTGATTGATTTCTCGGTAGCGATAAGCAA
AATACTCCTCTGTAAACTAATATAAGAACGATTGGATCACTATTTTAGTGTTCTAAATGCTCTATTAGTTTACGGAGGGA
GTAGAATCCTGATTATAACTGTTCTCGCGTAGACTCGCGACTCAAGATTTAGGGGAT----TTGATCTTTTTCAGGGCAG
CATTTTTATCTGGGCCATAACTTCAGCTACAGCTTGGCTATGTCTACATGAACATTCCTTTTCGATGATCT-CATTTTCG
AGCTAATAGTTCTTCAGCTCGTCTCAAAACAAGTTGTTGAACTGCTTGGGGCTGC----CTGCGATCGTCTGAACATTTT
GATTCCTCG-GCTGTTCCTGACCCTGATGCCTGTTCCCTCAACTGCAGGACACGTACCTCCCTCGCAATCCGGCGTGGAA
CGATCTTGTCTACAAGGCTGACGAGCCCAAACACAGCAGCACCAGCAGTAGCATGTA---GAACAAGTAAATCGTGTGCT
TACCTCAAAAGCTGTGG-------CAACTGCTATGTTAGTGTATCACTTAATAATCAGTTGCCCAATTGATCAACCATGG
CCACGCGCCCCTTGTAAGCCCTACGTCGCAGCGACTATTACGCTTAAGATTGACGTCATCCATGTAAAAGCATCAAGCGG
TCGATGT---------------------------------TAGAACATTGATGCGGAACTTAAAACAGGTCTTCATTTTC
ATCCGTGT--AAGCATCGGTAAACCGGAAACACATATTCGGTGGATGCTTTCATGGTTCAGGCCCAGGTTTCATGATATT
TCCGATGGACGACCACACACACAT--ACATATTCAGGGGCGAAATAGTGTTCAGATTCACGGAAACACTGAAACATGTCA
AAACTATAGAACAGTCTGCTGTGATTTCACAT--ATATCATTAGCCAGCCATGAGAATTTTGCAATACT--AAGGGATAC
CTGTAATTACGCATAACTTTGTTGAGACACCCTGCTATCATTTGCCAGGCACAAGAATTGTGCAATGATGCTGCGATTGA
TACCCCCATAATTATACATAACTCAGTTGTTACACATGGGTGCCTCCACCCGTTCGGACACGGTGTTTATTTTCTGGCCA
ACTTTATACCAGCAACATGCATAGCATATACTCCTCCGTTCCGAAATATTTGTCTTTTTAGAGATTCAAATAGACTACCA
CATACGGATGTATATAGACATATTTTAGAGTGTATATTCACTTATTTTGCTCCGTATGTAGTCACTTGTTGAAAACTCTA
GAAAGACAAATATTTAGGAACGGAGGGAGTACATTACAATACAACATGCCTTCAACCCGAAA-GGAAACAAGACAAGTAC
TGTGTATGTACATATCGTTCCAACATTAACTCGGTATGGAACGAAATAAGCCAGTCGTCTCCATCCGCAGCATAATATCA
GCCTGTGATGAGATTATCGACCATCTCCATTGCCCATCACCGCGGTCGTCTTTAGGCGGTGCTGCTCACC
>chr6B_2
-ACTCCAATGCCCGTCAAATGCCAACTTGACATAGATCCCAATGGTAAAGCAGTGGATCAAAA-GGTATATCGCTCCATG
ATTGGCTCCCTGCTTTACCTTTGTGCATCTAGACCGGGTATCATGTTGAGTGTGGGAATTTGTGCACGGTTTCAAGCCGC
ACCTAAGGAAAGCCACTACATGGCGGTCAAGCGAATCTTTCGATATTTGGCTCATACCCCAAACTTTGGATTGTGGTACC
CAAGAGGAGCCAACTTCAACCTTTTGGACTATTCAGACTCAGATTGGGCGGGAGACAGAGTGGATAGGAAGTCCACCTCT
GGAGGGTGCCAATTTCTTGGTTGCTCTTTGGTGAGTTGGTCTTCTAAGAAGCAAAGTTGTGTGTCTCTCTCGTCCACCTA
AGCGGAGTATGTGCCTGCCGGTAGTTGTTGTGCTCAACTTCTATGGATGAGGTAAACTTTGAAGGATTACGGTGTCATTT
GTGACGAAGTGCCTCTTTGGTGTGATAATGAAAGTGCCATCAAGATCTTTCTCAACCCGGTGCAACACTTCAAGACGAAG
CATATTGAGATTCGATATCACTTCATCCGGGATCACATTAGGCGAGGGGAGATCAAGCTCAAGTATGTCAACACTCATGA
TAACCTTGCAAATATTTTCACGAAGCCCTTGGATGAAGCAAGATTTCGTGAGTTAAGGCATGAGCTAAATATCATTGATT
CGAGCAATGTGGCTTGAACCTTTACACACCCCACCATACTCATCATGATGTCTTGT------------------------
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>chr3B_2
-ACTCCAATGCCCGTCAAATGCCAACTTGACATAGATCCCAATGGTAAAGCGGTGGATCAAAA-GGTATATCGCTCCATG
ATTGGCTCCTTGCTTTACCTTTGTGCATCTAGACCGGATATCATATTGAGTGTGGGAATTTGTGCACGGTTTCAATCCTC
ACCTAAGGAAAGTCACTATGTGGCGGTCAAGCAAATCTTTCGATGTTTGGCTCATACCCCAAAATTTGGCTTATGGTATC
CAAGAGGAGCCAACTTCAATCTTTTGGGCTATTCAGACTCAGATTGGGCGAGAGACAGAGTGGATAGGAAGTCCACCTCC
GGAGGGTGCCAATTTCTTGGTTGCTCTTTGGTGAGTTGGTCTTCTAAGAAGCAAAGTTGTGTGTCTCTCTCGTCCACCGA
AGCGGAGTATGTGGATGTCGGTAGTTGTTGTGCTCAATTTCTATGGATGAGACAAACTTTGAAGGATTACGGTGTCATTT
GTGATGAAGTGCCTCTTTGATGTGATAATGAAAGTGCCATCAAGATCTCTCTCAACCCGATGCAACACTTCAAGACAAAG
CATATCGAGATTCGGTGTCACTTCATCCGAGATCACATTAGGCGAGGGGAGATCAAGCTCAAGTATGTCAACACTCATGA
TAACCTTGCAGATATCTTCACGAACCCCTTAGATGAAGCAAGATTTCGCGAGTTAAGGCATGAGCTAAATATCATTGATT
CGAGCAATGTAGCTTGAACCCTTGCACACCCCACCATACTCAACTTGATATCTTGT------------------------
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>chr3B_2
-ACTCCAATGCCCGTCAAATGCCAACTTGACATAGATCCCAATGGTAAAGCGGTGGATCAAAA-GGTATATCGCTCCATG
ATTGGCTCCTTGCTTTACCTTTGTGCATCTAGACCGGATATCATGTTAAGTTTGGGAATTTGTGCACGGTTTCAAGCCGC
ACCTAAGGAAAGCCACTATGTGGCGGTCAAGCGAATCTTTCAATATTTGGCTCATACCCCAAACCTTGGCTTGTGGTACC
CAAGAAGAGCCAACTTCAACCTTTTGGGCTATTCAGACTCAGATTGGGCGGGAGACAGAGTGGATAGCAAGTCCACCTCC
GGAGGGTGCCAATTACTTGGTTGCTCTTTGGTGAGTTGGTCTTCTAAGAATCAAAGTTGTGTGTCTCTCTCGTCCATCAA
AGCGGAGTATGTGGCTGCCGGTAGTTGTTGTGCTCAACTTCTATGGATGAGGCAAACTTTGAAGGATTACGGTGTCATTT
GTGATGAAGTGCCTCTTTGGTGTGATAACGAAAGTGCCATCAAGATCTCTCTCAACCCCGTGCAACACTTCAAGACGAAG
CATATTGAGATTCGGTATCACTTCATCCGGGATCACATTAGGCGAGGGGAGATCAAGCTCAAGTATGTCAACACTCATGA
TAACCTTGCAGATATTTTCATGAAGCCCTTGGATGAAGCAAGATTTCACGAGTTAAGGCATGAACTAAATATCATTGATT
CGAGCAATGTAGCTTGAACTCTTGCACATCCCACCATAATCAACTTGA--------------------------------
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----------------------------------------------------------------------
>chr3B_2
-ACTCCAATGCCCATCAAATGCCAACTTGACATAGATCCCAATGGTAAAGCGGTGTATCAAAA-GGTATATCGCTCCATG
ATTGGCTCCCTGCTTTACCTTTGTGAATCTAGACCGGATATCATGTTGAGTGTGGGAATTTGTGCACGGTTTCAAGCCGC
ACCTAAGGAAATCCACTTTGTGGAGGTCAAGCAAATCTTTCGATATTTGGATCATACCCCAAACTTTATCTTATTGTACC
CAAGAGGATCCAACTTCGATCTTTTGGGCTATTTAGACTCAGATTGGGCGGGAGACAAAGTGGATAGGAAGTCCACCTCC
AGAGGGTGCCAATTTCTTGGTTTCTCTTTGGTGAGTTGGTCTGCTAAGAAGCAAAGTTGTGTATCTCTGTCGTCCACCGA
AGCGGAGTATGTGGCTGCCGGTAGTTGTTGTACTCAACTTCTATGGATGAGGCAAACTTTGAAGGATTACGGTGTCACTT
GTGATGAAGTGCATCTTTGGTGTGACAATGAAAGTGCCATCAAGATCTCTCTCAACCTGGTGCAACACTTCAAGACGAAG
CATATTGAGATTCGGTATCACTTCATCCAGGATCACATTAGGCGAGGGGAGATCAAGCTCAAGTATGTCAACACTCATGA
TAACCTTGCAGATTTTTTCATGAAGCCCTTGGATGAAGCAAGATTTCGCGAGTTAAGGCATGAGCTAAATATCATTGATT
TGAGTAATGTAGCTTGAACCCTTGCACACCCCACCATACTCAACTTGATATCTTGT------------------------
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----------------------------------------------------------------------
>chr4B_2
-ACCCCAATGCCCGTCAAATGCCAACTTGATATAGATCCTAATGGTAAAGTAATGGATCAAAA-GGTATATCACTCCATG
ATTGGCTCCTTGCTTTACCTTTGTGCATCTAGACCAGATATCATGTTGAGTGTGGGAATTTGTGCATGGTTTCAAGCCGC
ACCTAAGGAAAGCCACTTTGTGGCAGTTAAGCGAATCTTTCGATATTTGGCTCATACCCCAAAATTTGGCTTATGGTACC
CAAGAGGAGCCAACTTTGATCTTTTGGGCTATTCAGACTCAGATTGGGCGGGAGACAAAGTGGATAGGAAGTCCACCTCC
AGAGGGTGCCAATTTCTTGGTTGCTCTTTGGTGAGTTGGTCTTCTAAGAAGCAAAGTTGTGTGTCTCTCTCGTCCACCGA
GGCGGAGTATGTGGCTGCCGGTAGTTGTTGTGCTCAACTTCTATGGATGAGGCAAACTTTGAAGGATTA-AGTGTCACTT
GTGACAAAGTGCCTCTTTGGTGTGATAATGAAAGTGCCATCAAGATCTGTCTCAACCCGGTGCAACACTTCAAGACGAAG
CATATTGAGATTCGGTATCACTTCATTCAGGATCACATTAGGCGAGGGAAGATCAAGCTCAAGTATGTCAACACTCCTGA
TAACCATGCAAATATTTTCACGAAGCCCTTGAATGAAGCAAGATTTCGCGAGTTAAGGCATGAGCTAAATATCATTGATT
CAAGCAATGTAGCTTGAACCCTTTCACACCCCACCATACTCAACTTGATATCTTGT------------------------
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>chr5B_2
-ACTCCAATGCCCGTCAAATGCCAACTTGACATAGATCCCAATGGTAAAGCGGTGGA-CAAAA-GGTATATCGCTCCATA
ATTGGCTCCTTGCTTTACCTTTGTGCATCTAGACTGGATATCATGTTGAGTGTGGGAATTTTTGCACGGTTTCAAGCCGC
ACCTAAGGAAAGTCACTATGTGGCGGTCAAGCAAATCTTTTGATATTTGTCTCATACCCCAAACTTTGGCTCATGGTACC
CAAGAGGAACCAACTTCAATATTTTGGGCTATTCAGACTCAGATTGGGCGGGCGACAAAGTGGATAGGAAGTCCACCTCC
GGAGGGTGCCAATTTCTTGGTTGCTCTTTGGTGAGTTGGTCTTCCAAGAAGCAAAGTTGTGTGTCTCTCTCATCCACCGA
AGCAGAGTATGTGGCCGCCGGGAGTTGTTGTGCTCAAATTCTATGGATGAGGCAAACTTTGAAGGATTATGGTGTCACTT
GTGACGAAGTGCCTCTTTGGTGTGACAATGAAAGTGCCATCAAGATCTCTCTCAACCCGGTGCAACACTTTAAGACGAAG
CATATTGAGATTCAGTATCACTTCATCCGGGATCACATTAGGCGAGGGGAGATCAAGCTCAAGTATGTCAACACTCATGA
TAACCTTGAAGATATTTTCATGAAGTCCTTGGATGAAGCAAGATTTCGCGAGTTAAGGCATGAGCTAAATATCATTGATT
CGAGCAATGTAGCTTGAACCCTTGCACACCCCACCATACTCAACTTGAT-------------------------------
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>chr5B_2
-ACCCCAATGCCCGTCAAATGCCAACCTGACATAGATCCCAATGGTAAAGCAGTGGATCAAAA-GGTATATCGCTCCATG
ATTGGCTCCTTGCTTTACCTTTGTGCATCTAGACCGGATATCATGTTGAGTGTGGAAATTTGTGCATGGTTTCAAGCCGC
ACCTAAGGAAAGTCACTTTGTGGCGGTCAAGTGAATCTTTCGATATTTGGCTCATACCCCAAAATTTGGCTTATGGTACC
CAAGAGGAGCCAACTTTGATCTTTTGGGCCATTCAGACTCAGATTGGGCGGGAGACAAAGTGGATTGGAAGTCCACCTTT
GGAGGATGCCAATTTCTTGGTTGCTCTTTGGTAAGTTGGTATTTTAAGAAGCAAAGTTGTGTGTCTCTCTCGTCCATCGA
GGCAGAGTATGTGGCTGCCGGTAGTTGTTGTGCTCAACTTCTATGGATGAGGCAAACTTTGAAGGATTACAGTGTCACTT
GTGACAAAGTGCCTCTTTGGTGTGACAATGAAAGTGCCATCAAGATCTCTCTCAACCCGGTGCAACACTTCAAGACGAAG
CATATTGAGATTCGGTATCACTTCATCTGGGATCACATTATGCGAGGAGAGATCAAGATCAAGTATGTCAACACTCATGA
TAACCTTGCAGATATTTTCATGAAGCCCTTGGATGAAGCAAGATTTCGTGAGTTAAGGCATGAGCTAAATATCATTGATT
-GAGCAATGTAGCTTGAACCCTTGCACACCCCACCATACTCAACTTGAT-------------------------------
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>chr5A_2
-ACTCCAATGCCCGTCAAATGCCAACTTGACATAGATCCCAATGGTAAAGCGGTGGATCAAAAAGGTATGTCGCTCCATG
ATTGGCTTGTTGCTTTACCTTTGTGCATCTAGACCGGATATCATGTTGAGTGTGGGAATGTGTGCACGGTTTCAAGCTGC
ACCTAAGGAAAGCCACTTTGTGGCGGTCAAGCGTATCTTTTGATATTTGGCTCATACCCCAAAATTTGGCTTATGGTACC
CAAGAGGAGCCAACTTCGATCTTTTGGGCTATTCAGACTCAGATTGGGCGGGAGACAAAGTGGATAGGAAGTCCACCTCC
GGAGGGTGCCAATTCCTTGGTTGCTCTTTGGTGAGTTGGTCTTATAAGAAGCAAAGTTGTGTGTCTCTCTCGTCCACCGA
AGCGGAGTATGTGGCTGCCAGTAGTTGTTGTGCTCAACTTCTATGGATGAGGCAGACTTTGAAGGATTACGGTGTCACTT
GTGACGAAGTGTCTCTTTGGTGTGACAATGAAAGTGCCATCAAGATC-CTCTCAACCCGGTGCAACACTTCAAGACGAAG
CATATTGAGATTCAGTATCACTTCATCCGGGATCATATTAGGAGAGGGGAGATCAAGCTCAAGTATGTCAACACTCATGA
TAACCTTTCAGATATTTTCACGAAGCCCTTGGATGAAGCAACATTTCGTGAGTTAAGGCATGAGCTAAATATCATTGATT
CGAGCGATGTAGCTTGAACCCTTGCACATCCCACCATACTCAACTTGATATCTTGT------------------------
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>chr3D_2
-ACTCCAATGCCCGTCAAATGCCAACTTGACATAGATCCCAATGGTAAAGCGGTGGATCAAAA-GGTATATCGCTCCATG
ATTGGCTCCTTGCTTTTCCTTTGTGCATCTTGACCGGATATCATGTTGAGTGTGGGAATTTGTGCACGGTTTCAAGCCGC
ACCTAAGGAAAGCCACTTTGTGGCGGTCAAGCGAATCTTTTGATATTTGGCTCATACCCCAAA------CTTATGGTACC
CAAGAGGAGCAAACTTCAACCTTGTAGGCTATTCGGACTCCGATTGGGCGGGAGACAAAGTGGATAGGAAGTCAACTTCC
GGAGGGTGCCAATTCCTTGGTTGCTCTTTGGTGAGTTGGTCTTCGAAGAAGCAATGTTGTGTGTCTCTCTCGTCCACCGA
AGTGGAGTATGTGGCGGCCGGTAGTTGTTGTGCACAACTTCTATGGATGAGGCAAACTTTAAAGGATTACAGTGTCATTT
GTGACAAAGTGCGTCTTTGGTGTGACAATGAAAGTGCCATCAAGATTTCTCTCAACCCAGTGCAACACTTCAAGACGAAG
CATATTGAGATTTGGTATCACTTCATCCGGGATCACATTAGGCGAGGGGAGATCGAGCTCAACTACGTCAACACTCATGA
TAACCTTGCAGATATCTTCACGAAGCCCTTGGATGAAGCAAGATTTCGCGAGTTAAGGCATGAGCTAAATATCATTGATT
CGAGCAATGTGGCTTGAACCTTTGCACACCCCACCATACTCATCTTGATGTCTTGT------------------------
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>chr2A_1017
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------------------------------------------------------------------AACACCACAAAACA
GAATACTTGTACAGCCAAAAGAAAACAAAAACACGAACAGAAAATCACAGCGCGATGGCAAACGACGAGCGCGGCGCCGG
CGAGGAGCGGGGAGCGGCGGAGGACAGCATCGTGTGGAGGGAGGAGGCGGGGAAGTTCGAGACGCCCGACGGCGAGGCCT
TCCTCCAGTACCGCCTCGTCGTCCAGCCGCGCGCCTCCTCCGTCCGCGGCGGCGCGTCCCCGGCGGCGATGGACATGGTG
CACACGTACGTGCCCGGGAGCAAGCGCGGGCAGGGGCTCGCCGCGCGCCTCTGCGACGCCGCCTTTGCCCACGCGCAGCG
CCACGGCATGCGCGTCATCCCCGCCTGCTCCTACATCTCGGTACGGTCGCCCCTCTTCCCTTTCCTCTGCCC-CGAAGAC
CAAATCAACTCTTGCTCCGTGAGTTTCTCGGTGGTCAGCGCTAAATGATATATCTGCCCCAGAAAATGA-----------
--------------------------------------------------------------------------------
-----------------------------------------AAACGGAGTCGTGATTGATTTCTCGGTAGCGATAAGCTA
AATAGA--------------------------------------------------------------------------
----AATACTGATTGTGACTGTTCTCGCGTAGACTCGCGATTCAAGATTTAGGGGATTTGATTGAACTTCTTCAGGTCAG
CATTTTTATCTGGGCCGTAACTTCAGCTGCAGCTTGGCTATGTCTACATGAACATTC-TTTTCGAAGATCTCCATTTTCG
AGCTAATAGTTCTTCAGCTCGTCGCAAAACAAGTTGTTGAAGTGCTTGGGAA-------CTGCAATCGTCTCAACATTTT
TATTCTTCA-GCTGTTGCTGACCCTGATGCCTGTTCCCTGAACTGCAGGACACGTACCTCCCTCGCAATCCGGCGTGGAA
CGAACTTGTCTACAAGGCTGACGAGCCCAAACACAGCAGCACCAGCAGTAGCATGTAGTAGAACAAGTAAATCGTGTGCT
CACCTCAAAAGCTGTGGGTGTGCTCAGCTGCTATGTTAGTGTATCACTGAATAATCAGTTGCCCGGTTGATCAACCATGG
CGACGCGCCCCTTGTAAGCCCTACATCGCTGCGACTATTGAGCTTAAGATTCATGGCATTCATGTAAAAGCATCGAGCAG
TCGATGTGGAACGCGAAACAGGTCTTCGTTTTCATCCGTGTAGAACATTGATGCGGAACGCGAAACAGGTCTTCGTTTTC
ATCCGTGTACAAGCATCGGTAGACCGGAAACACATATTCGGTGGATGTTTTCATGGTTCAGGCCCAAGTTTCATGATATT
TTCGATGGACAACCACACACACAT----ATATTCAGCGGCGAAATAGTGTTCAGATTCAC--------------------
--------------------------------------------------ACGAGAATTATGCAATACTACAAGGGATAC
ATGTAATTATGCATAACTTTGTAGAGACACCCTGATATCATTTGCCAGACTTGAGAATTGTGGAATGCTGCGAATGATA-
----ACCATAATTATACATAACTCGGTTGTTACACAAGGGTGCCTCCACCCGTTTGGATATGGTGTTTATTTTCTGGCCC
ACTTTATACCAGCAACATACATAGCATATA---GTAT-------------------------------------------
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-------------------------------------AATACAACATGCCTTCAACCCGAAAAGGAAACAAGACAAGTAC
TGTGTATGTACATATCGTTCCAACATGAACACGGTATGGAACGAAATAAGCCGGTCCTCTCCATCCGCATCATAATATCA
GCCTGTGATGAGATTATCGACCATCTCCATTACCCGTCGTGGTGGTTGCCTTTAGGAGGTGCTGCTCACC
>chr2D_1023
ACAAA---------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
-AATACTTGTACAACCAAAAGAAAACAAAAACACGAACACAAAATCTCAGCGCGATGGCAAACGACGAGCGCGGCGCCGG
---CGAGCGTGGAGCGGCGGAGGACAGCGTCGTGTGGAGGGAGGAGGCGGGGAAGTTCGAGACGCCCGACGGCGAGGCCT
TCCTCCGGTACCGCCTCGTCGCCCAGCCGCGCGCCTCCTCCGGCCGCGGCGGCGCGTCCCCGGCGGCGATGAACATGGTG
CACACGTACGTGCCCGGGAGCAAGCGCGGGCAGGGGCTCGCCGCGCGCCTGTGCGACGCCGCCTTCGCCCACGCGCGGCG
CCACGGCATGCGCGTCATCCCCACCTGCTCCTACATCTCGGTACGGTCACCCCTCTTCCCTTTCCTCTGCCCCCGAAGAC
CAAATAAGCTCTTGCTC---------------------------------TATCTGCCCCCAAAACAATTGAAGGCTCTA
TTTGTGGTCTATTTGTGTCTTAGTTTTTTTTTTCTTCTTGTTGCTGTATTATATATTTATGAGAGTTTAGATATGACATC
TTAAAAAACATCTAGATGTGAATTAGTCAAACTGAAAATTGAAACGGGGTCGTGATTGATTTCTCGGTAGCGATAAGCAA
AATAGA--------------------------------------------------------------------------
----AATCCTGATTATAAGTGTTCTCGCGTAGACTTGCGATTCGAGATTTAGGGGAT----TTGATCTTTTTCAGGTGAG
CATTTTTATCTGGGCCATAACTTCAGCTACAGCTCTGCTCTGTCCACATGAACATTC-TATTCGAAGATCTCCATTTTCG
AGCTAATTGTCCTTCGGCTCGTCTCAAAACAAGTTGTTGAACTGCTTGGGAGCTGCAATCTGCAATCGTCTCAACATTTT
TATTCTTCGGGCTGTTGCTGACCCTGACGCCTGTTCCCTGAACTGCAGGACACGTACCTCCCTCGCAATCCGGCGTGGAA
CGATCTTGTCTACAAGGCTGACGAGCCCAAACGCAGCAGCACCAGCAGTAGCATGTAG---AACAAGTAAATCCTGTGCT
CACCTCAAAAGCTGTGGGTGTGCACAACTGCTATGTTAGTGTATCACTGAATAATCAGTTGCCCAATTGATCAACCATGG
CGACGCGCCCCTTGTAAGCCCTACGTCGCTGCGACTATTGAGCTTAAGATTCATGGCATTCATGTAAAAGCATCAAGCGG
TCGATGT---------------------------------TAGGACATTGATGCTGAACGCAAAACAGGTCTTCGTTTTC
ATCCGTGTACAAGCATCGGTACACCGGAAACACATA-TCGGCGGATGCTTTCATGGTTCAGGCCCAAGTTTCATGATATT
TTCGACGGACAACCACACACACACACACATATTCGGCAGCGAAATAGTGTTCAGATTCACGGAAATACTGAAACATGTCA
AAACTATAAAACAGTCTGCTGTGGTTTTCACATGATATCATTTGCCAGCCACGAGAATTATGCAATACTACAAGGGATAC
ATGTAATTATGCATAACTTTGTAGAGACACCCTGATACCATTTGCCAGACTTGAGAATTGTGGAATACTGCAAATGATA-
----CCCATAATTATACATAACTCGGTTGTTACACAAGGGTGCCTCCACCCGTTTCGATATGGTGTTTATTTTCTGGCCC
ACTTTATACCAGGAACATACATAGCATATACTCGTAT-------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------AATACAACATGCCTTCAACCCGAAAAGGAAACAAGACAAGTAC
TGTGTATGTACATATCGTTCCAACATGAACAAGGTACGGAACGAAATAAGCCGGTCCTCTACATCCGCATCATAATATCA
GCCTGTGATGAGATTATCGACCATCTCCATTACCAATCATCGTGGTTGCCTTTAGGAGGTGCTGCTCACC
>SNPs
S-------------------------------------------S-----------------------------------
------------------------------------------------------------------------S-------
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---S-----S-----------S----------S----------------S------------------------------
-------------S-----------------------S---S--------------------------------------
--S-----------------------------------------------------------------------------
-----------S----------------------------------S--------S------------------------
--------S-----------S-----------------------------------------------------------
---------S----------------------------S--------------------------------S--------
------------------------S---------------S-----------S---SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S------SS-
--S---------------------S-----------------------S----------------SSSSS---S--S--S
--------------------------------------------------------------------------------
----------------------S-----S---------------S-----------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------S---------S-
------------------------------S--S-S-S-----------S------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS------------------------------------S-----------------------------------S---
---------------------------------------------------------S-------S--------------
--------------------------------------------------SSSSS--------S-------S--------
S----S----------S----------------------S----------------------------------------
--------------------------------------------------------------------------------
S-----------------------------------------------S-------------------------------
-S---------------------------S---------SS----------S-S-S---S--------------------
-----------------------------------------------------------SS-------------S-----
---------------------S--------------------------------------------S-------------
-S--------S-------------------------S----------------------------S--------------
--------S--------------S---SSSSS----------S--------S-------S--------------------
S--------S------------S-----------S-------------S-SSS---------S----S---SSSSSS-SS
SSSS--------------------S-----------S-----------------S---S-S------------------S
------------------S--------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------
--------------------------S---S---------------------S---S------------S----------
-------------------------------S-------S--S---S-S-------S-------------
>forward_1008
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------CTAGAAGTGAGTGCGGGTGG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_2040
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CAACTGCAGGACACGTACCT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>forward_1972
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------GTTGTTGAACTGCTTGGGGC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_3169
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TCTTTAGGCGGTGCTGCTC---
