Multiple sequence alignment - TraesCS2B01G311400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G311400 chr2B 100.000 1761 0 0 1 1761 445489085 445490845 0.000000e+00 3253.0
1 TraesCS2B01G311400 chr2B 100.000 499 0 0 2231 2729 445491315 445491813 0.000000e+00 922.0
2 TraesCS2B01G311400 chr2B 84.906 106 16 0 157 262 778784533 778784638 1.030000e-19 108.0
3 TraesCS2B01G311400 chr2B 92.188 64 5 0 2617 2680 10743318 10743255 1.040000e-14 91.6
4 TraesCS2B01G311400 chr2A 90.950 1326 64 18 465 1761 507601373 507602671 0.000000e+00 1733.0
5 TraesCS2B01G311400 chr2A 93.617 141 3 5 2478 2617 507602872 507603007 3.560000e-49 206.0
6 TraesCS2B01G311400 chr2A 83.575 207 26 4 2231 2430 507602664 507602869 1.290000e-43 187.0
7 TraesCS2B01G311400 chr2D 91.620 1253 57 14 534 1754 375254406 375255642 0.000000e+00 1688.0
8 TraesCS2B01G311400 chr2D 89.076 476 39 9 1 468 375248613 375249083 1.820000e-161 579.0
9 TraesCS2B01G311400 chr2D 84.817 191 25 2 2243 2430 375255646 375255835 3.590000e-44 189.0
10 TraesCS2B01G311400 chr2D 87.500 144 3 10 2482 2625 375255835 375255963 4.710000e-33 152.0
11 TraesCS2B01G311400 chr2D 83.962 106 13 4 165 267 592430098 592430202 6.220000e-17 99.0
12 TraesCS2B01G311400 chr1A 76.558 337 59 15 1 328 571647012 571647337 1.680000e-37 167.0
13 TraesCS2B01G311400 chr7A 78.544 261 45 9 7 261 448110840 448110585 7.820000e-36 161.0
14 TraesCS2B01G311400 chr7A 91.803 61 5 0 2617 2677 661848972 661849032 4.840000e-13 86.1
15 TraesCS2B01G311400 chr7A 94.444 36 2 0 1 36 222502945 222502980 3.800000e-04 56.5
16 TraesCS2B01G311400 chr4D 77.778 216 37 8 143 352 116240343 116240553 3.690000e-24 122.0
17 TraesCS2B01G311400 chr4D 91.667 60 5 0 2617 2676 427027602 427027543 1.740000e-12 84.2
18 TraesCS2B01G311400 chr6D 83.740 123 17 2 144 263 62239615 62239737 2.220000e-21 113.0
19 TraesCS2B01G311400 chr6D 79.389 131 22 5 155 282 333054774 333054646 1.350000e-13 87.9
20 TraesCS2B01G311400 chr1B 85.321 109 13 3 157 263 622989959 622990066 2.870000e-20 110.0
21 TraesCS2B01G311400 chr7B 95.082 61 3 0 2617 2677 723891460 723891520 2.240000e-16 97.1
22 TraesCS2B01G311400 chr7B 89.706 68 6 1 2616 2682 589712285 589712218 4.840000e-13 86.1
23 TraesCS2B01G311400 chr4B 95.082 61 3 0 2617 2677 600366577 600366637 2.240000e-16 97.1
24 TraesCS2B01G311400 chr5B 78.676 136 28 1 157 291 176135134 176135269 3.740000e-14 89.8
25 TraesCS2B01G311400 chr5B 90.769 65 6 0 2616 2680 53667088 53667024 1.350000e-13 87.9
26 TraesCS2B01G311400 chr5B 91.935 62 5 0 2616 2677 325721588 325721527 1.350000e-13 87.9
27 TraesCS2B01G311400 chr4A 79.688 128 23 3 139 263 530276741 530276614 3.740000e-14 89.8
28 TraesCS2B01G311400 chr4A 89.552 67 7 0 2617 2683 38778061 38777995 4.840000e-13 86.1
29 TraesCS2B01G311400 chr4A 86.154 65 7 1 1 65 576607184 576607122 4.880000e-08 69.4
30 TraesCS2B01G311400 chr1D 88.679 53 5 1 296 347 449488118 449488066 2.270000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G311400 chr2B 445489085 445491813 2728 False 2087.500000 3253 100.000000 1 2729 2 chr2B.!!$F2 2728
1 TraesCS2B01G311400 chr2A 507601373 507603007 1634 False 708.666667 1733 89.380667 465 2617 3 chr2A.!!$F1 2152
2 TraesCS2B01G311400 chr2D 375254406 375255963 1557 False 676.333333 1688 87.979000 534 2625 3 chr2D.!!$F3 2091

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
63 64 0.028242 CGCAGTCGGCTGTAGACTAG 59.972 60.0 19.84 0.0 46.16 2.57 F
1287 1301 0.036388 TGGAGTTGGAGGCAATCGTC 60.036 55.0 0.00 0.0 0.00 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1623 1682 0.318784 GCGACAGGACTGAAACGTCT 60.319 55.0 6.29 0.0 34.38 4.18 R
2396 2460 0.034863 GAAAGGGGCGGGATACACAA 60.035 55.0 0.00 0.0 39.74 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.838271 GATGAGCGGGCTGTCGGA 61.838 66.667 0.00 0.00 0.00 4.55
18 19 4.148825 ATGAGCGGGCTGTCGGAC 62.149 66.667 0.00 0.00 0.00 4.79
20 21 4.148825 GAGCGGGCTGTCGGACAT 62.149 66.667 11.86 0.00 0.00 3.06
21 22 4.457496 AGCGGGCTGTCGGACATG 62.457 66.667 11.86 7.20 0.00 3.21
23 24 4.838152 CGGGCTGTCGGACATGGG 62.838 72.222 11.86 1.23 0.00 4.00
24 25 4.489771 GGGCTGTCGGACATGGGG 62.490 72.222 11.86 0.85 0.00 4.96
25 26 3.399181 GGCTGTCGGACATGGGGA 61.399 66.667 11.86 0.00 0.00 4.81
26 27 2.668632 GCTGTCGGACATGGGGAA 59.331 61.111 11.86 0.00 0.00 3.97
27 28 1.450312 GCTGTCGGACATGGGGAAG 60.450 63.158 11.86 0.00 0.00 3.46
28 29 1.899437 GCTGTCGGACATGGGGAAGA 61.899 60.000 11.86 0.00 0.00 2.87
29 30 0.176680 CTGTCGGACATGGGGAAGAG 59.823 60.000 11.86 0.00 0.00 2.85
30 31 0.252057 TGTCGGACATGGGGAAGAGA 60.252 55.000 6.76 0.00 0.00 3.10
31 32 0.902531 GTCGGACATGGGGAAGAGAA 59.097 55.000 2.62 0.00 0.00 2.87
32 33 1.486726 GTCGGACATGGGGAAGAGAAT 59.513 52.381 2.62 0.00 0.00 2.40
33 34 1.486310 TCGGACATGGGGAAGAGAATG 59.514 52.381 0.00 0.00 0.00 2.67
34 35 1.475751 CGGACATGGGGAAGAGAATGG 60.476 57.143 0.00 0.00 0.00 3.16
35 36 1.846439 GGACATGGGGAAGAGAATGGA 59.154 52.381 0.00 0.00 0.00 3.41
36 37 2.422093 GGACATGGGGAAGAGAATGGAC 60.422 54.545 0.00 0.00 0.00 4.02
37 38 1.210478 ACATGGGGAAGAGAATGGACG 59.790 52.381 0.00 0.00 0.00 4.79
38 39 0.181350 ATGGGGAAGAGAATGGACGC 59.819 55.000 0.00 0.00 0.00 5.19
39 40 0.909610 TGGGGAAGAGAATGGACGCT 60.910 55.000 0.00 0.00 0.00 5.07
40 41 0.179070 GGGGAAGAGAATGGACGCTC 60.179 60.000 0.00 0.00 0.00 5.03
41 42 0.179070 GGGAAGAGAATGGACGCTCC 60.179 60.000 0.00 0.00 36.96 4.70
42 43 0.528684 GGAAGAGAATGGACGCTCCG 60.529 60.000 0.00 0.00 40.17 4.63
43 44 1.148759 GAAGAGAATGGACGCTCCGC 61.149 60.000 0.00 0.00 40.17 5.54
44 45 2.579684 AAGAGAATGGACGCTCCGCC 62.580 60.000 0.00 0.00 40.17 6.13
45 46 4.514577 AGAATGGACGCTCCGCCG 62.515 66.667 0.59 0.00 40.17 6.46
62 63 2.095750 CGCAGTCGGCTGTAGACTA 58.904 57.895 19.84 0.00 46.16 2.59
63 64 0.028242 CGCAGTCGGCTGTAGACTAG 59.972 60.000 19.84 0.00 46.16 2.57
64 65 1.096416 GCAGTCGGCTGTAGACTAGT 58.904 55.000 19.84 0.00 46.16 2.57
65 66 1.064357 GCAGTCGGCTGTAGACTAGTC 59.936 57.143 19.84 15.41 46.16 2.59
66 67 2.357075 CAGTCGGCTGTAGACTAGTCA 58.643 52.381 24.44 8.16 46.16 3.41
67 68 2.747989 CAGTCGGCTGTAGACTAGTCAA 59.252 50.000 24.44 8.95 46.16 3.18
68 69 3.011119 AGTCGGCTGTAGACTAGTCAAG 58.989 50.000 24.44 18.06 46.06 3.02
69 70 2.097791 GTCGGCTGTAGACTAGTCAAGG 59.902 54.545 24.44 12.08 35.84 3.61
70 71 1.405821 CGGCTGTAGACTAGTCAAGGG 59.594 57.143 24.44 12.41 0.00 3.95
71 72 2.458620 GGCTGTAGACTAGTCAAGGGT 58.541 52.381 24.44 6.24 0.00 4.34
72 73 3.629087 GGCTGTAGACTAGTCAAGGGTA 58.371 50.000 24.44 5.23 0.00 3.69
73 74 4.216708 GGCTGTAGACTAGTCAAGGGTAT 58.783 47.826 24.44 4.78 0.00 2.73
74 75 4.278919 GGCTGTAGACTAGTCAAGGGTATC 59.721 50.000 24.44 5.87 0.00 2.24
75 76 5.134661 GCTGTAGACTAGTCAAGGGTATCT 58.865 45.833 24.44 3.32 0.00 1.98
76 77 5.009210 GCTGTAGACTAGTCAAGGGTATCTG 59.991 48.000 24.44 9.72 0.00 2.90
77 78 6.075949 TGTAGACTAGTCAAGGGTATCTGT 57.924 41.667 24.44 2.07 0.00 3.41
78 79 5.886474 TGTAGACTAGTCAAGGGTATCTGTG 59.114 44.000 24.44 0.00 0.00 3.66
79 80 4.936802 AGACTAGTCAAGGGTATCTGTGT 58.063 43.478 24.44 0.00 0.00 3.72
80 81 5.334421 AGACTAGTCAAGGGTATCTGTGTT 58.666 41.667 24.44 0.00 0.00 3.32
81 82 5.186021 AGACTAGTCAAGGGTATCTGTGTTG 59.814 44.000 24.44 0.00 0.00 3.33
82 83 4.838986 ACTAGTCAAGGGTATCTGTGTTGT 59.161 41.667 0.00 0.00 0.00 3.32
83 84 4.008074 AGTCAAGGGTATCTGTGTTGTG 57.992 45.455 0.00 0.00 0.00 3.33
84 85 3.074412 GTCAAGGGTATCTGTGTTGTGG 58.926 50.000 0.00 0.00 0.00 4.17
85 86 2.039746 TCAAGGGTATCTGTGTTGTGGG 59.960 50.000 0.00 0.00 0.00 4.61
86 87 2.038863 AGGGTATCTGTGTTGTGGGA 57.961 50.000 0.00 0.00 0.00 4.37
87 88 2.344592 AGGGTATCTGTGTTGTGGGAA 58.655 47.619 0.00 0.00 0.00 3.97
88 89 2.919602 AGGGTATCTGTGTTGTGGGAAT 59.080 45.455 0.00 0.00 0.00 3.01
89 90 3.016736 GGGTATCTGTGTTGTGGGAATG 58.983 50.000 0.00 0.00 0.00 2.67
90 91 3.016736 GGTATCTGTGTTGTGGGAATGG 58.983 50.000 0.00 0.00 0.00 3.16
91 92 3.308117 GGTATCTGTGTTGTGGGAATGGA 60.308 47.826 0.00 0.00 0.00 3.41
92 93 3.744940 ATCTGTGTTGTGGGAATGGAT 57.255 42.857 0.00 0.00 0.00 3.41
93 94 4.860802 ATCTGTGTTGTGGGAATGGATA 57.139 40.909 0.00 0.00 0.00 2.59
94 95 4.860802 TCTGTGTTGTGGGAATGGATAT 57.139 40.909 0.00 0.00 0.00 1.63
95 96 4.780815 TCTGTGTTGTGGGAATGGATATC 58.219 43.478 0.00 0.00 0.00 1.63
96 97 3.885297 CTGTGTTGTGGGAATGGATATCC 59.115 47.826 15.39 15.39 36.16 2.59
97 98 2.878406 GTGTTGTGGGAATGGATATCCG 59.122 50.000 17.04 0.00 37.87 4.18
98 99 1.880027 GTTGTGGGAATGGATATCCGC 59.120 52.381 17.04 8.67 37.87 5.54
99 100 0.400213 TGTGGGAATGGATATCCGCC 59.600 55.000 17.04 16.47 37.87 6.13
100 101 0.673644 GTGGGAATGGATATCCGCCG 60.674 60.000 17.04 0.00 37.87 6.46
101 102 0.834261 TGGGAATGGATATCCGCCGA 60.834 55.000 17.04 12.05 37.87 5.54
102 103 0.391263 GGGAATGGATATCCGCCGAC 60.391 60.000 17.04 6.07 37.87 4.79
103 104 0.736325 GGAATGGATATCCGCCGACG 60.736 60.000 17.04 0.00 39.43 5.12
104 105 1.352156 GAATGGATATCCGCCGACGC 61.352 60.000 17.04 0.00 39.43 5.19
105 106 2.781595 AATGGATATCCGCCGACGCC 62.782 60.000 17.04 0.00 39.43 5.68
193 194 8.970691 ATTTCTTCTTGTTTACATGAAATCCG 57.029 30.769 0.00 2.56 38.83 4.18
194 195 7.504924 TTCTTCTTGTTTACATGAAATCCGT 57.495 32.000 0.00 0.00 38.83 4.69
195 196 7.129109 TCTTCTTGTTTACATGAAATCCGTC 57.871 36.000 0.00 0.00 38.83 4.79
196 197 5.524511 TCTTGTTTACATGAAATCCGTCG 57.475 39.130 0.00 0.00 0.00 5.12
197 198 4.992319 TCTTGTTTACATGAAATCCGTCGT 59.008 37.500 0.00 0.00 0.00 4.34
198 199 4.655440 TGTTTACATGAAATCCGTCGTG 57.345 40.909 0.00 0.00 39.90 4.35
199 200 4.059511 TGTTTACATGAAATCCGTCGTGT 58.940 39.130 0.00 5.47 46.85 4.49
200 201 4.512198 TGTTTACATGAAATCCGTCGTGTT 59.488 37.500 0.00 0.00 43.68 3.32
201 202 5.007823 TGTTTACATGAAATCCGTCGTGTTT 59.992 36.000 0.00 0.00 43.68 2.83
202 203 3.536158 ACATGAAATCCGTCGTGTTTG 57.464 42.857 0.00 0.00 43.68 2.93
203 204 2.241722 CATGAAATCCGTCGTGTTTGC 58.758 47.619 0.00 0.00 31.10 3.68
204 205 1.300481 TGAAATCCGTCGTGTTTGCA 58.700 45.000 0.00 0.00 0.00 4.08
205 206 1.003331 TGAAATCCGTCGTGTTTGCAC 60.003 47.619 0.00 0.00 41.97 4.57
227 228 5.585500 CGAATTTCGTCTGGTTAGTTCAA 57.415 39.130 10.61 0.00 34.72 2.69
228 229 5.981174 CGAATTTCGTCTGGTTAGTTCAAA 58.019 37.500 10.61 0.00 34.72 2.69
229 230 6.599437 CGAATTTCGTCTGGTTAGTTCAAAT 58.401 36.000 10.61 0.00 34.72 2.32
230 231 7.735500 CGAATTTCGTCTGGTTAGTTCAAATA 58.264 34.615 10.61 0.00 34.72 1.40
231 232 7.898309 CGAATTTCGTCTGGTTAGTTCAAATAG 59.102 37.037 10.61 0.00 34.72 1.73
232 233 8.617290 AATTTCGTCTGGTTAGTTCAAATAGT 57.383 30.769 0.00 0.00 0.00 2.12
233 234 7.416154 TTTCGTCTGGTTAGTTCAAATAGTG 57.584 36.000 0.00 0.00 0.00 2.74
234 235 6.335471 TCGTCTGGTTAGTTCAAATAGTGA 57.665 37.500 0.00 0.00 0.00 3.41
235 236 6.931838 TCGTCTGGTTAGTTCAAATAGTGAT 58.068 36.000 0.00 0.00 35.70 3.06
236 237 7.383687 TCGTCTGGTTAGTTCAAATAGTGATT 58.616 34.615 0.00 0.00 35.70 2.57
237 238 7.330946 TCGTCTGGTTAGTTCAAATAGTGATTG 59.669 37.037 0.00 0.00 35.70 2.67
238 239 7.330946 CGTCTGGTTAGTTCAAATAGTGATTGA 59.669 37.037 0.00 0.00 35.70 2.57
239 240 8.999431 GTCTGGTTAGTTCAAATAGTGATTGAA 58.001 33.333 0.00 0.00 42.73 2.69
240 241 9.567776 TCTGGTTAGTTCAAATAGTGATTGAAA 57.432 29.630 3.51 0.00 45.43 2.69
247 248 9.793252 AGTTCAAATAGTGATTGAAATGTATGC 57.207 29.630 3.51 0.00 45.43 3.14
248 249 8.736742 GTTCAAATAGTGATTGAAATGTATGCG 58.263 33.333 3.51 0.00 45.43 4.73
249 250 7.416817 TCAAATAGTGATTGAAATGTATGCGG 58.583 34.615 0.00 0.00 34.04 5.69
250 251 5.947228 ATAGTGATTGAAATGTATGCGGG 57.053 39.130 0.00 0.00 0.00 6.13
251 252 3.884895 AGTGATTGAAATGTATGCGGGA 58.115 40.909 0.00 0.00 0.00 5.14
252 253 3.879295 AGTGATTGAAATGTATGCGGGAG 59.121 43.478 0.00 0.00 0.00 4.30
264 265 3.177600 CGGGAGCGTTTGATGGTG 58.822 61.111 0.00 0.00 0.00 4.17
265 266 2.398554 CGGGAGCGTTTGATGGTGG 61.399 63.158 0.00 0.00 0.00 4.61
266 267 2.700773 GGGAGCGTTTGATGGTGGC 61.701 63.158 0.00 0.00 0.00 5.01
267 268 1.971167 GGAGCGTTTGATGGTGGCA 60.971 57.895 0.00 0.00 0.00 4.92
268 269 1.315257 GGAGCGTTTGATGGTGGCAT 61.315 55.000 0.00 0.00 0.00 4.40
269 270 0.179156 GAGCGTTTGATGGTGGCATG 60.179 55.000 0.00 0.00 0.00 4.06
270 271 0.895100 AGCGTTTGATGGTGGCATGT 60.895 50.000 0.00 0.00 0.00 3.21
271 272 0.733566 GCGTTTGATGGTGGCATGTG 60.734 55.000 0.00 0.00 0.00 3.21
272 273 0.109179 CGTTTGATGGTGGCATGTGG 60.109 55.000 0.00 0.00 0.00 4.17
273 274 0.390209 GTTTGATGGTGGCATGTGGC 60.390 55.000 0.00 0.00 43.74 5.01
280 281 4.005902 TGGCATGTGGCATCACTG 57.994 55.556 5.03 0.00 46.12 3.66
281 282 1.075305 TGGCATGTGGCATCACTGT 59.925 52.632 5.03 0.00 46.12 3.55
282 283 0.540133 TGGCATGTGGCATCACTGTT 60.540 50.000 5.03 0.00 46.12 3.16
283 284 2.097464 TGGCATGTGGCATCACTGTTT 61.097 47.619 5.03 0.00 46.12 2.83
284 285 1.705256 GCATGTGGCATCACTGTTTG 58.295 50.000 0.00 0.00 43.94 2.93
285 286 1.270274 GCATGTGGCATCACTGTTTGA 59.730 47.619 0.00 0.00 43.94 2.69
286 287 2.670229 GCATGTGGCATCACTGTTTGAG 60.670 50.000 0.00 0.00 43.94 3.02
287 288 1.608055 TGTGGCATCACTGTTTGAGG 58.392 50.000 0.00 0.00 43.94 3.86
288 289 1.142667 TGTGGCATCACTGTTTGAGGA 59.857 47.619 0.00 0.00 43.94 3.71
289 290 1.537202 GTGGCATCACTGTTTGAGGAC 59.463 52.381 0.00 0.00 45.00 3.85
290 291 1.421268 TGGCATCACTGTTTGAGGACT 59.579 47.619 0.00 0.00 45.02 3.85
291 292 2.637382 TGGCATCACTGTTTGAGGACTA 59.363 45.455 0.00 0.00 45.02 2.59
292 293 3.264193 TGGCATCACTGTTTGAGGACTAT 59.736 43.478 0.00 0.00 45.02 2.12
293 294 3.873952 GGCATCACTGTTTGAGGACTATC 59.126 47.826 0.00 0.00 41.20 2.08
294 295 3.873952 GCATCACTGTTTGAGGACTATCC 59.126 47.826 0.00 0.00 38.35 2.59
303 304 3.831651 AGGACTATCCTCCTGTCCG 57.168 57.895 0.00 0.00 45.66 4.79
304 305 0.468400 AGGACTATCCTCCTGTCCGC 60.468 60.000 0.00 0.00 45.66 5.54
305 306 1.655329 GACTATCCTCCTGTCCGCG 59.345 63.158 0.00 0.00 0.00 6.46
306 307 1.797211 GACTATCCTCCTGTCCGCGG 61.797 65.000 22.12 22.12 0.00 6.46
307 308 1.528542 CTATCCTCCTGTCCGCGGA 60.529 63.158 27.28 27.28 0.00 5.54
308 309 1.797211 CTATCCTCCTGTCCGCGGAC 61.797 65.000 43.88 43.88 44.77 4.79
327 328 2.755836 CGGATACCGGAGCAAATTTG 57.244 50.000 9.46 14.03 44.15 2.32
336 337 4.645692 GCAAATTTGCGGTTCGGT 57.354 50.000 26.15 0.00 45.11 4.69
337 338 2.140923 GCAAATTTGCGGTTCGGTG 58.859 52.632 26.15 0.00 45.11 4.94
338 339 0.596341 GCAAATTTGCGGTTCGGTGT 60.596 50.000 26.15 0.00 45.11 4.16
339 340 1.404477 CAAATTTGCGGTTCGGTGTC 58.596 50.000 5.01 0.00 0.00 3.67
340 341 0.040781 AAATTTGCGGTTCGGTGTCG 60.041 50.000 0.00 0.00 37.82 4.35
341 342 1.847890 AATTTGCGGTTCGGTGTCGG 61.848 55.000 0.00 0.00 36.95 4.79
342 343 2.718747 ATTTGCGGTTCGGTGTCGGA 62.719 55.000 0.00 0.00 36.95 4.55
343 344 3.851845 TTGCGGTTCGGTGTCGGAG 62.852 63.158 0.00 0.00 36.95 4.63
344 345 4.047059 GCGGTTCGGTGTCGGAGA 62.047 66.667 0.00 0.00 36.95 3.71
345 346 2.882876 CGGTTCGGTGTCGGAGAT 59.117 61.111 0.00 0.00 40.67 2.75
346 347 1.516386 CGGTTCGGTGTCGGAGATG 60.516 63.158 0.00 0.00 40.67 2.90
347 348 1.810030 GGTTCGGTGTCGGAGATGC 60.810 63.158 0.00 0.00 40.67 3.91
348 349 2.158959 GTTCGGTGTCGGAGATGCG 61.159 63.158 0.00 0.00 40.67 4.73
349 350 3.982372 TTCGGTGTCGGAGATGCGC 62.982 63.158 0.00 0.00 40.67 6.09
350 351 4.498520 CGGTGTCGGAGATGCGCT 62.499 66.667 9.73 0.00 40.67 5.92
351 352 2.125512 GGTGTCGGAGATGCGCTT 60.126 61.111 9.73 0.55 40.67 4.68
352 353 2.456119 GGTGTCGGAGATGCGCTTG 61.456 63.158 9.73 0.00 40.67 4.01
353 354 2.125552 TGTCGGAGATGCGCTTGG 60.126 61.111 9.73 0.00 40.67 3.61
354 355 2.184322 GTCGGAGATGCGCTTGGA 59.816 61.111 9.73 0.00 40.67 3.53
355 356 1.447838 GTCGGAGATGCGCTTGGAA 60.448 57.895 9.73 0.00 40.67 3.53
356 357 1.153568 TCGGAGATGCGCTTGGAAG 60.154 57.895 9.73 0.00 0.00 3.46
371 372 2.162716 GAAGCAATCTTCACGCGGT 58.837 52.632 12.47 0.00 46.14 5.68
372 373 0.095417 GAAGCAATCTTCACGCGGTC 59.905 55.000 12.47 0.00 46.14 4.79
373 374 1.626654 AAGCAATCTTCACGCGGTCG 61.627 55.000 12.47 0.00 42.43 4.79
374 375 2.092291 GCAATCTTCACGCGGTCGA 61.092 57.895 12.47 0.00 39.41 4.20
375 376 1.991430 CAATCTTCACGCGGTCGAG 59.009 57.895 12.47 2.63 39.41 4.04
376 377 0.456142 CAATCTTCACGCGGTCGAGA 60.456 55.000 12.47 8.65 39.41 4.04
377 378 0.456221 AATCTTCACGCGGTCGAGAT 59.544 50.000 12.47 10.69 39.41 2.75
378 379 0.456221 ATCTTCACGCGGTCGAGATT 59.544 50.000 12.47 0.00 39.41 2.40
379 380 0.456142 TCTTCACGCGGTCGAGATTG 60.456 55.000 12.47 0.00 39.41 2.67
380 381 0.732880 CTTCACGCGGTCGAGATTGT 60.733 55.000 12.47 0.00 39.41 2.71
381 382 0.319211 TTCACGCGGTCGAGATTGTT 60.319 50.000 12.47 0.00 39.41 2.83
382 383 0.522626 TCACGCGGTCGAGATTGTTA 59.477 50.000 12.47 0.00 39.41 2.41
383 384 1.068402 TCACGCGGTCGAGATTGTTAA 60.068 47.619 12.47 0.00 39.41 2.01
384 385 1.722464 CACGCGGTCGAGATTGTTAAA 59.278 47.619 12.47 0.00 39.41 1.52
385 386 2.156117 CACGCGGTCGAGATTGTTAAAA 59.844 45.455 12.47 0.00 39.41 1.52
386 387 2.801679 ACGCGGTCGAGATTGTTAAAAA 59.198 40.909 12.47 0.00 39.41 1.94
420 421 6.567769 CTGCAAGTTCAATGTTTAAAACGT 57.432 33.333 0.00 0.00 0.00 3.99
421 422 7.672351 CTGCAAGTTCAATGTTTAAAACGTA 57.328 32.000 0.00 0.00 0.00 3.57
422 423 7.439204 TGCAAGTTCAATGTTTAAAACGTAC 57.561 32.000 0.00 0.00 0.00 3.67
423 424 7.251994 TGCAAGTTCAATGTTTAAAACGTACT 58.748 30.769 0.00 0.00 0.00 2.73
424 425 8.396390 TGCAAGTTCAATGTTTAAAACGTACTA 58.604 29.630 0.00 0.00 0.00 1.82
425 426 8.675888 GCAAGTTCAATGTTTAAAACGTACTAC 58.324 33.333 0.00 0.00 0.00 2.73
426 427 9.925268 CAAGTTCAATGTTTAAAACGTACTACT 57.075 29.630 0.00 0.00 0.00 2.57
430 431 8.770850 TCAATGTTTAAAACGTACTACTTTGC 57.229 30.769 0.00 0.00 0.00 3.68
431 432 8.396390 TCAATGTTTAAAACGTACTACTTTGCA 58.604 29.630 0.00 0.00 0.00 4.08
432 433 9.176181 CAATGTTTAAAACGTACTACTTTGCAT 57.824 29.630 0.00 0.00 0.00 3.96
433 434 9.738832 AATGTTTAAAACGTACTACTTTGCATT 57.261 25.926 0.00 0.00 0.00 3.56
434 435 9.738832 ATGTTTAAAACGTACTACTTTGCATTT 57.261 25.926 0.00 0.00 0.00 2.32
435 436 9.570488 TGTTTAAAACGTACTACTTTGCATTTT 57.430 25.926 0.00 0.00 0.00 1.82
440 441 8.736751 AAACGTACTACTTTGCATTTTATTGG 57.263 30.769 0.00 0.00 0.00 3.16
441 442 6.319399 ACGTACTACTTTGCATTTTATTGGC 58.681 36.000 0.00 0.00 0.00 4.52
442 443 6.150474 ACGTACTACTTTGCATTTTATTGGCT 59.850 34.615 0.00 0.00 0.00 4.75
443 444 7.334921 ACGTACTACTTTGCATTTTATTGGCTA 59.665 33.333 0.00 0.00 0.00 3.93
444 445 8.178964 CGTACTACTTTGCATTTTATTGGCTAA 58.821 33.333 0.00 0.00 0.00 3.09
445 446 9.849166 GTACTACTTTGCATTTTATTGGCTAAA 57.151 29.630 0.00 0.00 0.00 1.85
450 451 9.546428 ACTTTGCATTTTATTGGCTAAATATCC 57.454 29.630 0.00 0.00 30.74 2.59
451 452 9.545105 CTTTGCATTTTATTGGCTAAATATCCA 57.455 29.630 0.00 0.00 30.74 3.41
452 453 9.896645 TTTGCATTTTATTGGCTAAATATCCAA 57.103 25.926 0.00 0.00 45.35 3.53
461 462 7.581213 TTGGCTAAATATCCAATGGTAGTTG 57.419 36.000 0.00 0.00 37.43 3.16
463 464 6.068670 GGCTAAATATCCAATGGTAGTTGGT 58.931 40.000 0.00 0.00 46.92 3.67
470 471 3.008594 TCCAATGGTAGTTGGTGTTCGAT 59.991 43.478 0.00 0.00 46.92 3.59
479 480 0.896479 TGGTGTTCGATCCGGAGACA 60.896 55.000 11.34 9.40 29.79 3.41
485 486 2.052782 TCGATCCGGAGACATCTTGA 57.947 50.000 11.34 0.00 0.00 3.02
486 487 2.587522 TCGATCCGGAGACATCTTGAT 58.412 47.619 11.34 0.00 0.00 2.57
487 488 2.554462 TCGATCCGGAGACATCTTGATC 59.446 50.000 11.34 0.00 33.14 2.92
488 489 2.556189 CGATCCGGAGACATCTTGATCT 59.444 50.000 11.34 0.00 33.74 2.75
489 490 3.753797 CGATCCGGAGACATCTTGATCTA 59.246 47.826 11.34 0.00 33.74 1.98
500 501 6.538021 AGACATCTTGATCTACAGTCAAATGC 59.462 38.462 0.00 0.00 35.36 3.56
540 541 5.067153 TGGACCCAAGTGATAAATTAATGCG 59.933 40.000 0.00 0.00 0.00 4.73
582 583 6.686130 ATTACAAGTAACACTCGAGAAACG 57.314 37.500 21.68 6.89 44.09 3.60
646 647 0.666577 GGCAGTACGTCACAGTCACC 60.667 60.000 0.00 0.00 0.00 4.02
654 655 1.153061 TCACAGTCACCCCTCTCGT 59.847 57.895 0.00 0.00 0.00 4.18
746 747 2.423185 TGAAACACGCCATCATTCCATC 59.577 45.455 0.00 0.00 0.00 3.51
767 768 2.287608 CGAGCAAACTCCAAAACTTCCC 60.288 50.000 0.00 0.00 40.03 3.97
768 769 2.035961 GAGCAAACTCCAAAACTTCCCC 59.964 50.000 0.00 0.00 36.90 4.81
769 770 1.070134 GCAAACTCCAAAACTTCCCCC 59.930 52.381 0.00 0.00 0.00 5.40
770 771 2.677914 CAAACTCCAAAACTTCCCCCT 58.322 47.619 0.00 0.00 0.00 4.79
771 772 3.038280 CAAACTCCAAAACTTCCCCCTT 58.962 45.455 0.00 0.00 0.00 3.95
772 773 2.677542 ACTCCAAAACTTCCCCCTTC 57.322 50.000 0.00 0.00 0.00 3.46
773 774 1.147191 ACTCCAAAACTTCCCCCTTCC 59.853 52.381 0.00 0.00 0.00 3.46
815 816 3.637273 GACCCTCCCAACGGCACT 61.637 66.667 0.00 0.00 0.00 4.40
816 817 3.607370 GACCCTCCCAACGGCACTC 62.607 68.421 0.00 0.00 0.00 3.51
817 818 4.760047 CCCTCCCAACGGCACTCG 62.760 72.222 0.00 0.00 45.88 4.18
913 923 4.229812 CCTCCCTTTTATACCAAACCTCCT 59.770 45.833 0.00 0.00 0.00 3.69
916 926 5.192321 TCCCTTTTATACCAAACCTCCTACC 59.808 44.000 0.00 0.00 0.00 3.18
917 927 5.044698 CCCTTTTATACCAAACCTCCTACCA 60.045 44.000 0.00 0.00 0.00 3.25
937 947 0.838122 CCAGAGTCCCAGTTCCCAGT 60.838 60.000 0.00 0.00 0.00 4.00
953 963 6.556495 AGTTCCCAGTCATACACATCTGATAT 59.444 38.462 0.00 0.00 0.00 1.63
966 976 6.985059 ACACATCTGATATCAATCACTCACAG 59.015 38.462 6.90 0.00 37.20 3.66
970 980 4.124970 TGATATCAATCACTCACAGCTGC 58.875 43.478 15.27 0.00 37.20 5.25
975 985 2.816601 ATCACTCACAGCTGCTGCCC 62.817 60.000 28.39 0.00 40.80 5.36
999 1010 0.607489 GCAGGCAAGAAGAGGCAAGA 60.607 55.000 0.00 0.00 0.00 3.02
1214 1225 2.434331 CGGCTCCAACCCCAAGAA 59.566 61.111 0.00 0.00 0.00 2.52
1246 1260 3.484547 CGACGCGTAACAAGGGCC 61.485 66.667 13.97 0.00 0.00 5.80
1287 1301 0.036388 TGGAGTTGGAGGCAATCGTC 60.036 55.000 0.00 0.00 0.00 4.20
1290 1304 0.389948 AGTTGGAGGCAATCGTCGTC 60.390 55.000 0.00 0.00 0.00 4.20
1443 1457 2.904866 GTGTCGTGCTTTGGGGCA 60.905 61.111 0.00 0.00 40.15 5.36
1574 1633 2.358247 CAACCGTCGGGAAGGTGG 60.358 66.667 17.28 0.34 42.33 4.61
1582 1641 1.689233 CGGGAAGGTGGATCTGGGA 60.689 63.158 0.00 0.00 0.00 4.37
1679 1738 1.079750 GACTGGGAGACGTGAAGCC 60.080 63.158 0.00 0.00 0.00 4.35
1680 1739 2.266055 CTGGGAGACGTGAAGCCC 59.734 66.667 0.00 0.00 41.08 5.19
1754 1814 1.301716 GCGTGCTTGAGGAACAGGA 60.302 57.895 0.00 0.00 0.00 3.86
1755 1815 0.884704 GCGTGCTTGAGGAACAGGAA 60.885 55.000 0.00 0.00 0.00 3.36
1757 1817 0.877743 GTGCTTGAGGAACAGGAAGC 59.122 55.000 0.00 0.00 32.43 3.86
1758 1818 0.473755 TGCTTGAGGAACAGGAAGCA 59.526 50.000 0.00 0.00 37.48 3.91
1759 1819 0.877743 GCTTGAGGAACAGGAAGCAC 59.122 55.000 0.00 0.00 32.19 4.40
1760 1820 1.151668 CTTGAGGAACAGGAAGCACG 58.848 55.000 0.00 0.00 0.00 5.34
2273 2337 3.809832 ACACATCTTCAGTTGTACACAGC 59.190 43.478 0.00 0.00 0.00 4.40
2277 2341 3.728845 TCTTCAGTTGTACACAGCCTTC 58.271 45.455 0.00 0.00 0.00 3.46
2285 2349 0.320421 TACACAGCCTTCCGTGCTTC 60.320 55.000 0.00 0.00 36.81 3.86
2301 2365 1.885163 CTTCGGTAGGCACGGGAACT 61.885 60.000 0.00 0.00 0.00 3.01
2335 2399 2.740452 GGTTGCCGAGCATAGTAGTAC 58.260 52.381 0.00 0.00 38.76 2.73
2336 2400 2.382519 GTTGCCGAGCATAGTAGTACG 58.617 52.381 0.00 0.00 38.76 3.67
2337 2401 1.671979 TGCCGAGCATAGTAGTACGT 58.328 50.000 0.00 0.00 31.71 3.57
2375 2439 2.465855 CCCGTGCTAAACAAAACCAAC 58.534 47.619 0.00 0.00 0.00 3.77
2378 2442 3.429684 CCGTGCTAAACAAAACCAACCTT 60.430 43.478 0.00 0.00 0.00 3.50
2385 2449 6.420903 GCTAAACAAAACCAACCTTTGATCTC 59.579 38.462 2.51 0.00 37.25 2.75
2390 2454 4.731313 AACCAACCTTTGATCTCCTCTT 57.269 40.909 0.00 0.00 0.00 2.85
2396 2460 3.009916 ACCTTTGATCTCCTCTTGTGCAT 59.990 43.478 0.00 0.00 0.00 3.96
2408 2475 0.808125 TTGTGCATTGTGTATCCCGC 59.192 50.000 0.00 0.00 0.00 6.13
2410 2477 1.453015 TGCATTGTGTATCCCGCCC 60.453 57.895 0.00 0.00 0.00 6.13
2429 2496 3.440522 GCCCCTTTCTTTTGTACAGCTAG 59.559 47.826 0.00 0.00 0.00 3.42
2430 2497 3.440522 CCCCTTTCTTTTGTACAGCTAGC 59.559 47.826 6.62 6.62 0.00 3.42
2431 2498 4.327680 CCCTTTCTTTTGTACAGCTAGCT 58.672 43.478 12.68 12.68 0.00 3.32
2432 2499 5.488341 CCCTTTCTTTTGTACAGCTAGCTA 58.512 41.667 18.86 0.00 0.00 3.32
2433 2500 5.351740 CCCTTTCTTTTGTACAGCTAGCTAC 59.648 44.000 18.86 13.91 0.00 3.58
2434 2501 5.062308 CCTTTCTTTTGTACAGCTAGCTACG 59.938 44.000 18.86 8.88 0.00 3.51
2435 2502 3.508762 TCTTTTGTACAGCTAGCTACGC 58.491 45.455 18.86 10.55 0.00 4.42
2436 2503 2.288961 TTTGTACAGCTAGCTACGCC 57.711 50.000 18.86 6.42 0.00 5.68
2437 2504 1.471119 TTGTACAGCTAGCTACGCCT 58.529 50.000 18.86 0.15 0.00 5.52
2438 2505 0.738975 TGTACAGCTAGCTACGCCTG 59.261 55.000 18.86 7.43 0.00 4.85
2439 2506 0.595310 GTACAGCTAGCTACGCCTGC 60.595 60.000 18.86 0.05 0.00 4.85
2440 2507 0.752009 TACAGCTAGCTACGCCTGCT 60.752 55.000 18.86 5.30 43.79 4.24
2441 2508 1.142748 CAGCTAGCTACGCCTGCTT 59.857 57.895 18.86 0.00 41.46 3.91
2442 2509 0.873743 CAGCTAGCTACGCCTGCTTC 60.874 60.000 18.86 0.00 41.46 3.86
2443 2510 1.592939 GCTAGCTACGCCTGCTTCC 60.593 63.158 7.70 0.00 41.46 3.46
2444 2511 2.022240 GCTAGCTACGCCTGCTTCCT 62.022 60.000 7.70 0.00 41.46 3.36
2445 2512 0.461961 CTAGCTACGCCTGCTTCCTT 59.538 55.000 2.87 0.00 41.46 3.36
2446 2513 0.460311 TAGCTACGCCTGCTTCCTTC 59.540 55.000 2.87 0.00 41.46 3.46
2447 2514 1.815840 GCTACGCCTGCTTCCTTCC 60.816 63.158 0.00 0.00 0.00 3.46
2448 2515 1.596934 CTACGCCTGCTTCCTTCCA 59.403 57.895 0.00 0.00 0.00 3.53
2449 2516 0.179000 CTACGCCTGCTTCCTTCCAT 59.821 55.000 0.00 0.00 0.00 3.41
2450 2517 0.107703 TACGCCTGCTTCCTTCCATG 60.108 55.000 0.00 0.00 0.00 3.66
2451 2518 1.377725 CGCCTGCTTCCTTCCATGT 60.378 57.895 0.00 0.00 0.00 3.21
2452 2519 0.107703 CGCCTGCTTCCTTCCATGTA 60.108 55.000 0.00 0.00 0.00 2.29
2453 2520 1.383523 GCCTGCTTCCTTCCATGTAC 58.616 55.000 0.00 0.00 0.00 2.90
2454 2521 1.656652 CCTGCTTCCTTCCATGTACG 58.343 55.000 0.00 0.00 0.00 3.67
2455 2522 1.656652 CTGCTTCCTTCCATGTACGG 58.343 55.000 0.00 0.00 0.00 4.02
2456 2523 0.251916 TGCTTCCTTCCATGTACGGG 59.748 55.000 0.00 0.00 0.00 5.28
2457 2524 1.095807 GCTTCCTTCCATGTACGGGC 61.096 60.000 0.00 0.00 0.00 6.13
2458 2525 0.810031 CTTCCTTCCATGTACGGGCG 60.810 60.000 0.00 0.00 0.00 6.13
2459 2526 2.862674 TTCCTTCCATGTACGGGCGC 62.863 60.000 0.00 0.00 0.00 6.53
2460 2527 2.125310 CTTCCATGTACGGGCGCA 60.125 61.111 10.83 0.00 0.00 6.09
2461 2528 1.743623 CTTCCATGTACGGGCGCAA 60.744 57.895 10.83 0.00 0.00 4.85
2462 2529 1.705337 CTTCCATGTACGGGCGCAAG 61.705 60.000 10.83 4.46 43.44 4.01
2475 2542 3.604130 CGCAAGCAGGTAAAATCGG 57.396 52.632 0.00 0.00 0.00 4.18
2476 2543 0.802494 CGCAAGCAGGTAAAATCGGT 59.198 50.000 0.00 0.00 0.00 4.69
2477 2544 1.465689 CGCAAGCAGGTAAAATCGGTG 60.466 52.381 0.00 0.00 0.00 4.94
2478 2545 1.539827 GCAAGCAGGTAAAATCGGTGT 59.460 47.619 0.00 0.00 0.00 4.16
2479 2546 2.745281 GCAAGCAGGTAAAATCGGTGTA 59.255 45.455 0.00 0.00 0.00 2.90
2480 2547 3.425758 GCAAGCAGGTAAAATCGGTGTAC 60.426 47.826 0.00 0.00 0.00 2.90
2524 2598 6.385649 AATCGGTGTTTGACTTTTGTATGT 57.614 33.333 0.00 0.00 0.00 2.29
2526 2600 6.289745 TCGGTGTTTGACTTTTGTATGTAC 57.710 37.500 0.00 0.00 0.00 2.90
2569 2643 1.293924 GGCACAATCTCATCACTCGG 58.706 55.000 0.00 0.00 0.00 4.63
2584 2658 1.001269 TCGGTCACTGGTCGGAGAT 60.001 57.895 0.00 0.00 40.67 2.75
2586 2660 1.100510 CGGTCACTGGTCGGAGATAA 58.899 55.000 0.00 0.00 40.67 1.75
2587 2661 1.475280 CGGTCACTGGTCGGAGATAAA 59.525 52.381 0.00 0.00 40.67 1.40
2588 2662 2.479730 CGGTCACTGGTCGGAGATAAAG 60.480 54.545 0.00 0.00 40.67 1.85
2617 2691 5.340439 AAGGCAATGTGTACTACTCCTAC 57.660 43.478 0.00 0.00 0.00 3.18
2618 2692 4.611367 AGGCAATGTGTACTACTCCTACT 58.389 43.478 0.00 0.00 0.00 2.57
2619 2693 5.763355 AGGCAATGTGTACTACTCCTACTA 58.237 41.667 0.00 0.00 0.00 1.82
2621 2695 5.593502 GGCAATGTGTACTACTCCTACTAGT 59.406 44.000 0.00 0.00 0.00 2.57
2622 2696 6.459848 GGCAATGTGTACTACTCCTACTAGTG 60.460 46.154 5.39 0.00 0.00 2.74
2623 2697 6.459848 GCAATGTGTACTACTCCTACTAGTGG 60.460 46.154 5.39 1.52 34.39 4.00
2624 2698 5.768980 TGTGTACTACTCCTACTAGTGGT 57.231 43.478 5.39 2.05 42.92 4.16
2625 2699 6.131972 TGTGTACTACTCCTACTAGTGGTT 57.868 41.667 5.39 0.55 41.01 3.67
2626 2700 5.942236 TGTGTACTACTCCTACTAGTGGTTG 59.058 44.000 5.39 0.00 41.01 3.77
2627 2701 5.356470 GTGTACTACTCCTACTAGTGGTTGG 59.644 48.000 5.39 0.55 41.01 3.77
2628 2702 3.978610 ACTACTCCTACTAGTGGTTGGG 58.021 50.000 5.39 0.28 37.90 4.12
2629 2703 2.249309 ACTCCTACTAGTGGTTGGGG 57.751 55.000 5.39 5.45 44.92 4.96
2630 2704 0.831307 CTCCTACTAGTGGTTGGGGC 59.169 60.000 5.39 0.00 40.41 5.80
2631 2705 0.974010 TCCTACTAGTGGTTGGGGCG 60.974 60.000 5.39 0.00 40.41 6.13
2632 2706 1.153429 CTACTAGTGGTTGGGGCGC 60.153 63.158 5.39 0.00 0.00 6.53
2633 2707 2.588856 CTACTAGTGGTTGGGGCGCC 62.589 65.000 21.18 21.18 0.00 6.53
2634 2708 4.028490 CTAGTGGTTGGGGCGCCA 62.028 66.667 30.85 20.22 0.00 5.69
2650 2724 4.335647 CACCTGGTGGCGCCTCTT 62.336 66.667 29.70 7.29 38.35 2.85
2651 2725 4.335647 ACCTGGTGGCGCCTCTTG 62.336 66.667 29.70 19.08 38.35 3.02
2652 2726 4.020617 CCTGGTGGCGCCTCTTGA 62.021 66.667 29.70 2.88 38.35 3.02
2653 2727 2.270205 CTGGTGGCGCCTCTTGAT 59.730 61.111 29.70 0.00 38.35 2.57
2654 2728 2.046023 TGGTGGCGCCTCTTGATG 60.046 61.111 29.70 0.00 38.35 3.07
2655 2729 3.512516 GGTGGCGCCTCTTGATGC 61.513 66.667 29.70 6.19 0.00 3.91
2656 2730 2.747460 GTGGCGCCTCTTGATGCA 60.747 61.111 29.70 0.00 0.00 3.96
2657 2731 2.437180 TGGCGCCTCTTGATGCAG 60.437 61.111 29.70 0.00 0.00 4.41
2658 2732 3.207669 GGCGCCTCTTGATGCAGG 61.208 66.667 22.15 0.00 0.00 4.85
2659 2733 2.124983 GCGCCTCTTGATGCAGGA 60.125 61.111 0.00 0.00 30.32 3.86
2660 2734 1.525535 GCGCCTCTTGATGCAGGAT 60.526 57.895 0.00 0.00 30.32 3.24
2661 2735 1.099879 GCGCCTCTTGATGCAGGATT 61.100 55.000 0.00 0.00 30.32 3.01
2662 2736 0.661552 CGCCTCTTGATGCAGGATTG 59.338 55.000 0.00 0.00 30.32 2.67
2663 2737 1.030457 GCCTCTTGATGCAGGATTGG 58.970 55.000 0.00 0.00 30.32 3.16
2664 2738 1.688772 CCTCTTGATGCAGGATTGGG 58.311 55.000 0.00 0.00 30.32 4.12
2665 2739 1.030457 CTCTTGATGCAGGATTGGGC 58.970 55.000 0.00 0.00 0.00 5.36
2666 2740 0.332293 TCTTGATGCAGGATTGGGCA 59.668 50.000 0.00 0.00 45.23 5.36
2667 2741 0.458669 CTTGATGCAGGATTGGGCAC 59.541 55.000 0.00 0.00 43.75 5.01
2668 2742 0.251698 TTGATGCAGGATTGGGCACA 60.252 50.000 0.00 0.00 43.75 4.57
2669 2743 0.966875 TGATGCAGGATTGGGCACAC 60.967 55.000 0.00 0.00 43.75 3.82
2670 2744 0.682209 GATGCAGGATTGGGCACACT 60.682 55.000 0.00 0.00 43.75 3.55
2671 2745 0.625316 ATGCAGGATTGGGCACACTA 59.375 50.000 0.00 0.00 43.75 2.74
2672 2746 0.403655 TGCAGGATTGGGCACACTAA 59.596 50.000 0.00 0.00 34.58 2.24
2673 2747 1.005805 TGCAGGATTGGGCACACTAAT 59.994 47.619 0.00 0.00 34.58 1.73
2674 2748 1.678101 GCAGGATTGGGCACACTAATC 59.322 52.381 0.00 0.00 43.93 1.75
2675 2749 2.945440 GCAGGATTGGGCACACTAATCA 60.945 50.000 0.00 0.00 45.78 2.57
2676 2750 3.355378 CAGGATTGGGCACACTAATCAA 58.645 45.455 0.00 0.00 45.78 2.57
2677 2751 3.763360 CAGGATTGGGCACACTAATCAAA 59.237 43.478 0.00 0.00 45.78 2.69
2678 2752 4.403432 CAGGATTGGGCACACTAATCAAAT 59.597 41.667 0.00 0.00 45.78 2.32
2679 2753 5.025453 AGGATTGGGCACACTAATCAAATT 58.975 37.500 0.00 0.00 45.78 1.82
2680 2754 5.127682 AGGATTGGGCACACTAATCAAATTC 59.872 40.000 0.00 0.00 45.78 2.17
2681 2755 4.799564 TTGGGCACACTAATCAAATTCC 57.200 40.909 0.00 0.00 0.00 3.01
2682 2756 3.772387 TGGGCACACTAATCAAATTCCA 58.228 40.909 0.00 0.00 0.00 3.53
2683 2757 4.155709 TGGGCACACTAATCAAATTCCAA 58.844 39.130 0.00 0.00 0.00 3.53
2684 2758 4.590647 TGGGCACACTAATCAAATTCCAAA 59.409 37.500 0.00 0.00 0.00 3.28
2685 2759 5.248020 TGGGCACACTAATCAAATTCCAAAT 59.752 36.000 0.00 0.00 0.00 2.32
2686 2760 5.812127 GGGCACACTAATCAAATTCCAAATC 59.188 40.000 0.00 0.00 0.00 2.17
2687 2761 5.812127 GGCACACTAATCAAATTCCAAATCC 59.188 40.000 0.00 0.00 0.00 3.01
2688 2762 6.397272 GCACACTAATCAAATTCCAAATCCA 58.603 36.000 0.00 0.00 0.00 3.41
2689 2763 6.311200 GCACACTAATCAAATTCCAAATCCAC 59.689 38.462 0.00 0.00 0.00 4.02
2690 2764 7.605449 CACACTAATCAAATTCCAAATCCACT 58.395 34.615 0.00 0.00 0.00 4.00
2691 2765 8.090214 CACACTAATCAAATTCCAAATCCACTT 58.910 33.333 0.00 0.00 0.00 3.16
2692 2766 8.650490 ACACTAATCAAATTCCAAATCCACTTT 58.350 29.630 0.00 0.00 0.00 2.66
2693 2767 8.928733 CACTAATCAAATTCCAAATCCACTTTG 58.071 33.333 0.00 0.00 43.27 2.77
2694 2768 8.650490 ACTAATCAAATTCCAAATCCACTTTGT 58.350 29.630 0.00 0.00 42.29 2.83
2695 2769 9.492973 CTAATCAAATTCCAAATCCACTTTGTT 57.507 29.630 0.00 0.00 42.29 2.83
2696 2770 7.967890 ATCAAATTCCAAATCCACTTTGTTC 57.032 32.000 0.00 0.00 42.29 3.18
2697 2771 6.882656 TCAAATTCCAAATCCACTTTGTTCA 58.117 32.000 0.00 0.00 42.29 3.18
2698 2772 7.507829 TCAAATTCCAAATCCACTTTGTTCAT 58.492 30.769 0.00 0.00 42.29 2.57
2699 2773 8.646004 TCAAATTCCAAATCCACTTTGTTCATA 58.354 29.630 0.00 0.00 42.29 2.15
2700 2774 9.270640 CAAATTCCAAATCCACTTTGTTCATAA 57.729 29.630 0.00 0.00 42.29 1.90
2702 2776 9.657419 AATTCCAAATCCACTTTGTTCATAATC 57.343 29.630 0.00 0.00 42.29 1.75
2703 2777 7.169158 TCCAAATCCACTTTGTTCATAATCC 57.831 36.000 0.00 0.00 42.29 3.01
2704 2778 6.154363 TCCAAATCCACTTTGTTCATAATCCC 59.846 38.462 0.00 0.00 42.29 3.85
2705 2779 6.070881 CCAAATCCACTTTGTTCATAATCCCA 60.071 38.462 0.00 0.00 42.29 4.37
2706 2780 7.364939 CCAAATCCACTTTGTTCATAATCCCAT 60.365 37.037 0.00 0.00 42.29 4.00
2707 2781 8.694540 CAAATCCACTTTGTTCATAATCCCATA 58.305 33.333 0.00 0.00 39.55 2.74
2708 2782 9.438163 AAATCCACTTTGTTCATAATCCCATAT 57.562 29.630 0.00 0.00 0.00 1.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.838271 TCCGACAGCCCGCTCATC 61.838 66.667 0.00 0.00 0.00 2.92
1 2 4.148825 GTCCGACAGCCCGCTCAT 62.149 66.667 0.00 0.00 0.00 2.90
3 4 4.148825 ATGTCCGACAGCCCGCTC 62.149 66.667 7.41 0.00 0.00 5.03
4 5 4.457496 CATGTCCGACAGCCCGCT 62.457 66.667 7.41 0.00 0.00 5.52
6 7 4.838152 CCCATGTCCGACAGCCCG 62.838 72.222 7.41 0.00 0.00 6.13
7 8 4.489771 CCCCATGTCCGACAGCCC 62.490 72.222 7.41 0.00 0.00 5.19
8 9 2.876368 CTTCCCCATGTCCGACAGCC 62.876 65.000 7.41 0.00 0.00 4.85
9 10 1.450312 CTTCCCCATGTCCGACAGC 60.450 63.158 7.41 0.00 0.00 4.40
10 11 0.176680 CTCTTCCCCATGTCCGACAG 59.823 60.000 7.41 0.00 0.00 3.51
11 12 0.252057 TCTCTTCCCCATGTCCGACA 60.252 55.000 3.10 3.10 0.00 4.35
12 13 0.902531 TTCTCTTCCCCATGTCCGAC 59.097 55.000 0.00 0.00 0.00 4.79
13 14 1.486310 CATTCTCTTCCCCATGTCCGA 59.514 52.381 0.00 0.00 0.00 4.55
14 15 1.475751 CCATTCTCTTCCCCATGTCCG 60.476 57.143 0.00 0.00 0.00 4.79
15 16 1.846439 TCCATTCTCTTCCCCATGTCC 59.154 52.381 0.00 0.00 0.00 4.02
16 17 2.743183 CGTCCATTCTCTTCCCCATGTC 60.743 54.545 0.00 0.00 0.00 3.06
17 18 1.210478 CGTCCATTCTCTTCCCCATGT 59.790 52.381 0.00 0.00 0.00 3.21
18 19 1.959042 CGTCCATTCTCTTCCCCATG 58.041 55.000 0.00 0.00 0.00 3.66
19 20 0.181350 GCGTCCATTCTCTTCCCCAT 59.819 55.000 0.00 0.00 0.00 4.00
20 21 0.909610 AGCGTCCATTCTCTTCCCCA 60.910 55.000 0.00 0.00 0.00 4.96
21 22 0.179070 GAGCGTCCATTCTCTTCCCC 60.179 60.000 0.00 0.00 0.00 4.81
22 23 0.179070 GGAGCGTCCATTCTCTTCCC 60.179 60.000 0.00 0.00 36.28 3.97
23 24 0.528684 CGGAGCGTCCATTCTCTTCC 60.529 60.000 5.15 0.00 35.91 3.46
24 25 2.964911 CGGAGCGTCCATTCTCTTC 58.035 57.895 5.15 0.00 35.91 2.87
47 48 2.783609 TGACTAGTCTACAGCCGACT 57.216 50.000 23.01 0.00 43.64 4.18
48 49 2.097791 CCTTGACTAGTCTACAGCCGAC 59.902 54.545 23.01 0.00 0.00 4.79
49 50 2.366533 CCTTGACTAGTCTACAGCCGA 58.633 52.381 23.01 0.00 0.00 5.54
50 51 1.405821 CCCTTGACTAGTCTACAGCCG 59.594 57.143 23.01 4.25 0.00 5.52
51 52 2.458620 ACCCTTGACTAGTCTACAGCC 58.541 52.381 23.01 0.00 0.00 4.85
52 53 5.009210 CAGATACCCTTGACTAGTCTACAGC 59.991 48.000 23.01 6.13 0.00 4.40
53 54 6.038825 CACAGATACCCTTGACTAGTCTACAG 59.961 46.154 23.01 15.25 0.00 2.74
54 55 5.886474 CACAGATACCCTTGACTAGTCTACA 59.114 44.000 23.01 7.07 0.00 2.74
55 56 5.887035 ACACAGATACCCTTGACTAGTCTAC 59.113 44.000 23.01 3.66 0.00 2.59
56 57 6.075949 ACACAGATACCCTTGACTAGTCTA 57.924 41.667 23.01 15.07 0.00 2.59
57 58 4.936802 ACACAGATACCCTTGACTAGTCT 58.063 43.478 23.01 5.66 0.00 3.24
58 59 5.047235 ACAACACAGATACCCTTGACTAGTC 60.047 44.000 16.32 16.32 0.00 2.59
59 60 4.838986 ACAACACAGATACCCTTGACTAGT 59.161 41.667 0.00 0.00 0.00 2.57
60 61 5.171476 CACAACACAGATACCCTTGACTAG 58.829 45.833 0.00 0.00 0.00 2.57
61 62 4.020573 CCACAACACAGATACCCTTGACTA 60.021 45.833 0.00 0.00 0.00 2.59
62 63 3.244561 CCACAACACAGATACCCTTGACT 60.245 47.826 0.00 0.00 0.00 3.41
63 64 3.074412 CCACAACACAGATACCCTTGAC 58.926 50.000 0.00 0.00 0.00 3.18
64 65 2.039746 CCCACAACACAGATACCCTTGA 59.960 50.000 0.00 0.00 0.00 3.02
65 66 2.039746 TCCCACAACACAGATACCCTTG 59.960 50.000 0.00 0.00 0.00 3.61
66 67 2.344592 TCCCACAACACAGATACCCTT 58.655 47.619 0.00 0.00 0.00 3.95
67 68 2.038863 TCCCACAACACAGATACCCT 57.961 50.000 0.00 0.00 0.00 4.34
68 69 2.871096 TTCCCACAACACAGATACCC 57.129 50.000 0.00 0.00 0.00 3.69
69 70 3.016736 CCATTCCCACAACACAGATACC 58.983 50.000 0.00 0.00 0.00 2.73
70 71 3.950397 TCCATTCCCACAACACAGATAC 58.050 45.455 0.00 0.00 0.00 2.24
71 72 4.860802 ATCCATTCCCACAACACAGATA 57.139 40.909 0.00 0.00 0.00 1.98
72 73 3.744940 ATCCATTCCCACAACACAGAT 57.255 42.857 0.00 0.00 0.00 2.90
73 74 4.385199 GGATATCCATTCCCACAACACAGA 60.385 45.833 17.34 0.00 35.64 3.41
74 75 3.885297 GGATATCCATTCCCACAACACAG 59.115 47.826 17.34 0.00 35.64 3.66
75 76 3.684130 CGGATATCCATTCCCACAACACA 60.684 47.826 21.70 0.00 35.14 3.72
76 77 2.878406 CGGATATCCATTCCCACAACAC 59.122 50.000 21.70 0.00 35.14 3.32
77 78 2.748132 GCGGATATCCATTCCCACAACA 60.748 50.000 21.70 0.00 35.14 3.33
78 79 1.880027 GCGGATATCCATTCCCACAAC 59.120 52.381 21.70 0.00 35.14 3.32
79 80 1.202879 GGCGGATATCCATTCCCACAA 60.203 52.381 21.70 0.00 35.14 3.33
80 81 0.400213 GGCGGATATCCATTCCCACA 59.600 55.000 21.70 0.00 35.14 4.17
81 82 0.673644 CGGCGGATATCCATTCCCAC 60.674 60.000 21.70 2.51 35.14 4.61
82 83 0.834261 TCGGCGGATATCCATTCCCA 60.834 55.000 21.70 5.36 35.14 4.37
83 84 0.391263 GTCGGCGGATATCCATTCCC 60.391 60.000 21.70 13.62 35.14 3.97
84 85 0.736325 CGTCGGCGGATATCCATTCC 60.736 60.000 21.70 16.46 35.14 3.01
85 86 1.352156 GCGTCGGCGGATATCCATTC 61.352 60.000 21.70 9.48 38.78 2.67
86 87 1.374252 GCGTCGGCGGATATCCATT 60.374 57.895 21.70 0.00 38.78 3.16
87 88 2.261671 GCGTCGGCGGATATCCAT 59.738 61.111 21.70 0.00 38.78 3.41
88 89 3.986006 GGCGTCGGCGGATATCCA 61.986 66.667 21.70 0.00 41.24 3.41
103 104 2.643933 AAAACTAGTCTACGACCGGC 57.356 50.000 0.00 0.00 32.18 6.13
104 105 4.954092 AGTAAAACTAGTCTACGACCGG 57.046 45.455 0.00 0.00 32.18 5.28
105 106 7.522374 ACTAAAGTAAAACTAGTCTACGACCG 58.478 38.462 0.00 0.00 32.18 4.79
106 107 8.726068 AGACTAAAGTAAAACTAGTCTACGACC 58.274 37.037 9.66 0.00 40.49 4.79
107 108 9.540431 CAGACTAAAGTAAAACTAGTCTACGAC 57.460 37.037 10.62 0.00 40.38 4.34
108 109 8.725148 CCAGACTAAAGTAAAACTAGTCTACGA 58.275 37.037 10.62 0.00 40.38 3.43
109 110 8.510505 ACCAGACTAAAGTAAAACTAGTCTACG 58.489 37.037 10.62 7.78 40.38 3.51
167 168 9.410556 CGGATTTCATGTAAACAAGAAGAAATT 57.589 29.630 12.89 0.00 35.40 1.82
168 169 8.576442 ACGGATTTCATGTAAACAAGAAGAAAT 58.424 29.630 12.11 12.11 35.40 2.17
169 170 7.936584 ACGGATTTCATGTAAACAAGAAGAAA 58.063 30.769 1.61 0.00 35.40 2.52
170 171 7.504924 ACGGATTTCATGTAAACAAGAAGAA 57.495 32.000 1.61 0.00 35.40 2.52
171 172 6.128661 CGACGGATTTCATGTAAACAAGAAGA 60.129 38.462 1.61 0.00 35.40 2.87
172 173 6.015504 CGACGGATTTCATGTAAACAAGAAG 58.984 40.000 1.61 0.00 35.40 2.85
173 174 5.467399 ACGACGGATTTCATGTAAACAAGAA 59.533 36.000 0.00 0.00 32.54 2.52
174 175 4.992319 ACGACGGATTTCATGTAAACAAGA 59.008 37.500 0.00 0.00 0.00 3.02
175 176 5.079406 CACGACGGATTTCATGTAAACAAG 58.921 41.667 0.00 0.00 0.00 3.16
176 177 4.512198 ACACGACGGATTTCATGTAAACAA 59.488 37.500 0.00 0.00 0.00 2.83
177 178 4.059511 ACACGACGGATTTCATGTAAACA 58.940 39.130 0.00 0.00 0.00 2.83
178 179 4.657075 ACACGACGGATTTCATGTAAAC 57.343 40.909 0.00 0.00 0.00 2.01
179 180 5.444983 CAAACACGACGGATTTCATGTAAA 58.555 37.500 0.00 0.00 0.00 2.01
180 181 4.611807 GCAAACACGACGGATTTCATGTAA 60.612 41.667 0.00 0.00 0.00 2.41
181 182 3.120477 GCAAACACGACGGATTTCATGTA 60.120 43.478 0.00 0.00 0.00 2.29
182 183 2.350388 GCAAACACGACGGATTTCATGT 60.350 45.455 0.00 0.00 0.00 3.21
183 184 2.241722 GCAAACACGACGGATTTCATG 58.758 47.619 0.00 0.00 0.00 3.07
184 185 1.876799 TGCAAACACGACGGATTTCAT 59.123 42.857 0.00 0.00 0.00 2.57
185 186 1.003331 GTGCAAACACGACGGATTTCA 60.003 47.619 0.00 0.00 36.98 2.69
186 187 1.670326 GTGCAAACACGACGGATTTC 58.330 50.000 0.00 0.00 36.98 2.17
187 188 3.837669 GTGCAAACACGACGGATTT 57.162 47.368 0.00 0.00 36.98 2.17
205 206 5.585500 TTGAACTAACCAGACGAAATTCG 57.415 39.130 14.35 14.35 46.93 3.34
206 207 8.718734 ACTATTTGAACTAACCAGACGAAATTC 58.281 33.333 0.00 0.00 0.00 2.17
207 208 8.504005 CACTATTTGAACTAACCAGACGAAATT 58.496 33.333 0.00 0.00 0.00 1.82
208 209 7.876068 TCACTATTTGAACTAACCAGACGAAAT 59.124 33.333 0.00 0.00 0.00 2.17
209 210 7.211573 TCACTATTTGAACTAACCAGACGAAA 58.788 34.615 0.00 0.00 0.00 3.46
210 211 6.751157 TCACTATTTGAACTAACCAGACGAA 58.249 36.000 0.00 0.00 0.00 3.85
211 212 6.335471 TCACTATTTGAACTAACCAGACGA 57.665 37.500 0.00 0.00 0.00 4.20
212 213 7.330946 TCAATCACTATTTGAACTAACCAGACG 59.669 37.037 0.00 0.00 37.92 4.18
213 214 8.547967 TCAATCACTATTTGAACTAACCAGAC 57.452 34.615 0.00 0.00 37.92 3.51
214 215 9.567776 TTTCAATCACTATTTGAACTAACCAGA 57.432 29.630 0.00 0.00 41.45 3.86
221 222 9.793252 GCATACATTTCAATCACTATTTGAACT 57.207 29.630 0.00 0.00 41.45 3.01
222 223 8.736742 CGCATACATTTCAATCACTATTTGAAC 58.263 33.333 0.00 0.00 41.45 3.18
223 224 7.914871 CCGCATACATTTCAATCACTATTTGAA 59.085 33.333 0.00 0.00 40.37 2.69
224 225 7.416817 CCGCATACATTTCAATCACTATTTGA 58.583 34.615 0.00 0.00 39.11 2.69
225 226 6.638063 CCCGCATACATTTCAATCACTATTTG 59.362 38.462 0.00 0.00 0.00 2.32
226 227 6.545666 TCCCGCATACATTTCAATCACTATTT 59.454 34.615 0.00 0.00 0.00 1.40
227 228 6.061441 TCCCGCATACATTTCAATCACTATT 58.939 36.000 0.00 0.00 0.00 1.73
228 229 5.620206 TCCCGCATACATTTCAATCACTAT 58.380 37.500 0.00 0.00 0.00 2.12
229 230 5.029807 TCCCGCATACATTTCAATCACTA 57.970 39.130 0.00 0.00 0.00 2.74
230 231 3.879295 CTCCCGCATACATTTCAATCACT 59.121 43.478 0.00 0.00 0.00 3.41
231 232 3.548818 GCTCCCGCATACATTTCAATCAC 60.549 47.826 0.00 0.00 35.78 3.06
232 233 2.618241 GCTCCCGCATACATTTCAATCA 59.382 45.455 0.00 0.00 35.78 2.57
233 234 2.349817 CGCTCCCGCATACATTTCAATC 60.350 50.000 0.00 0.00 35.30 2.67
234 235 1.603802 CGCTCCCGCATACATTTCAAT 59.396 47.619 0.00 0.00 35.30 2.57
235 236 1.013596 CGCTCCCGCATACATTTCAA 58.986 50.000 0.00 0.00 35.30 2.69
236 237 0.107897 ACGCTCCCGCATACATTTCA 60.108 50.000 0.00 0.00 38.22 2.69
237 238 1.014352 AACGCTCCCGCATACATTTC 58.986 50.000 0.00 0.00 38.22 2.17
238 239 1.132262 CAAACGCTCCCGCATACATTT 59.868 47.619 0.00 0.00 38.22 2.32
239 240 0.732571 CAAACGCTCCCGCATACATT 59.267 50.000 0.00 0.00 38.22 2.71
240 241 0.107897 TCAAACGCTCCCGCATACAT 60.108 50.000 0.00 0.00 38.22 2.29
241 242 0.107897 ATCAAACGCTCCCGCATACA 60.108 50.000 0.00 0.00 38.22 2.29
242 243 0.304705 CATCAAACGCTCCCGCATAC 59.695 55.000 0.00 0.00 38.22 2.39
243 244 0.813610 CCATCAAACGCTCCCGCATA 60.814 55.000 0.00 0.00 38.22 3.14
244 245 2.114670 CCATCAAACGCTCCCGCAT 61.115 57.895 0.00 0.00 38.22 4.73
245 246 2.745884 CCATCAAACGCTCCCGCA 60.746 61.111 0.00 0.00 38.22 5.69
246 247 2.746277 ACCATCAAACGCTCCCGC 60.746 61.111 0.00 0.00 38.22 6.13
247 248 2.398554 CCACCATCAAACGCTCCCG 61.399 63.158 0.00 0.00 41.14 5.14
248 249 2.700773 GCCACCATCAAACGCTCCC 61.701 63.158 0.00 0.00 0.00 4.30
249 250 1.315257 ATGCCACCATCAAACGCTCC 61.315 55.000 0.00 0.00 0.00 4.70
250 251 0.179156 CATGCCACCATCAAACGCTC 60.179 55.000 0.00 0.00 0.00 5.03
251 252 0.895100 ACATGCCACCATCAAACGCT 60.895 50.000 0.00 0.00 0.00 5.07
252 253 0.733566 CACATGCCACCATCAAACGC 60.734 55.000 0.00 0.00 0.00 4.84
253 254 0.109179 CCACATGCCACCATCAAACG 60.109 55.000 0.00 0.00 0.00 3.60
254 255 0.390209 GCCACATGCCACCATCAAAC 60.390 55.000 0.00 0.00 0.00 2.93
255 256 0.830866 TGCCACATGCCACCATCAAA 60.831 50.000 0.00 0.00 40.16 2.69
256 257 0.615261 ATGCCACATGCCACCATCAA 60.615 50.000 0.00 0.00 40.16 2.57
257 258 1.000612 ATGCCACATGCCACCATCA 59.999 52.632 0.00 0.00 40.16 3.07
258 259 1.038681 TGATGCCACATGCCACCATC 61.039 55.000 0.00 1.10 40.16 3.51
259 260 1.000612 TGATGCCACATGCCACCAT 59.999 52.632 0.00 0.00 40.16 3.55
260 261 1.978080 GTGATGCCACATGCCACCA 60.978 57.895 0.00 0.00 42.72 4.17
261 262 1.679977 AGTGATGCCACATGCCACC 60.680 57.895 0.00 0.00 45.54 4.61
262 263 1.246056 ACAGTGATGCCACATGCCAC 61.246 55.000 0.00 0.00 45.54 5.01
263 264 0.540133 AACAGTGATGCCACATGCCA 60.540 50.000 0.00 0.00 45.54 4.92
264 265 0.604578 AAACAGTGATGCCACATGCC 59.395 50.000 0.00 0.00 45.54 4.40
265 266 1.270274 TCAAACAGTGATGCCACATGC 59.730 47.619 0.00 0.00 45.54 4.06
266 267 2.094906 CCTCAAACAGTGATGCCACATG 60.095 50.000 0.00 0.00 45.54 3.21
267 268 2.165167 CCTCAAACAGTGATGCCACAT 58.835 47.619 0.00 0.00 45.54 3.21
268 269 1.142667 TCCTCAAACAGTGATGCCACA 59.857 47.619 0.00 0.00 45.54 4.17
269 270 1.537202 GTCCTCAAACAGTGATGCCAC 59.463 52.381 0.00 0.00 43.50 5.01
270 271 1.421268 AGTCCTCAAACAGTGATGCCA 59.579 47.619 0.00 0.00 35.07 4.92
271 272 2.191128 AGTCCTCAAACAGTGATGCC 57.809 50.000 0.00 0.00 35.07 4.40
272 273 3.873952 GGATAGTCCTCAAACAGTGATGC 59.126 47.826 0.00 0.00 35.07 3.91
273 274 5.350504 AGGATAGTCCTCAAACAGTGATG 57.649 43.478 0.00 0.00 45.66 3.07
286 287 1.797211 CGCGGACAGGAGGATAGTCC 61.797 65.000 0.00 0.00 46.48 3.85
287 288 1.655329 CGCGGACAGGAGGATAGTC 59.345 63.158 0.00 0.00 0.00 2.59
288 289 1.828660 CCGCGGACAGGAGGATAGT 60.829 63.158 24.07 0.00 0.00 2.12
289 290 1.528542 TCCGCGGACAGGAGGATAG 60.529 63.158 27.28 0.00 30.43 2.08
290 291 1.826921 GTCCGCGGACAGGAGGATA 60.827 63.158 44.88 12.82 44.02 2.59
291 292 3.148279 GTCCGCGGACAGGAGGAT 61.148 66.667 44.88 0.00 44.02 3.24
302 303 4.323843 CTCCGGTATCCGTCCGCG 62.324 72.222 0.00 0.00 46.80 6.46
303 304 4.642542 GCTCCGGTATCCGTCCGC 62.643 72.222 0.00 3.26 46.80 5.54
304 305 2.287457 TTTGCTCCGGTATCCGTCCG 62.287 60.000 0.00 0.00 46.80 4.79
305 306 0.106149 ATTTGCTCCGGTATCCGTCC 59.894 55.000 0.00 0.00 46.80 4.79
306 307 1.949465 AATTTGCTCCGGTATCCGTC 58.051 50.000 0.00 0.00 46.80 4.79
307 308 2.014128 CAAATTTGCTCCGGTATCCGT 58.986 47.619 5.01 0.00 46.80 4.69
320 321 1.404477 GACACCGAACCGCAAATTTG 58.596 50.000 14.03 14.03 0.00 2.32
321 322 0.040781 CGACACCGAACCGCAAATTT 60.041 50.000 0.00 0.00 38.22 1.82
322 323 1.572447 CGACACCGAACCGCAAATT 59.428 52.632 0.00 0.00 38.22 1.82
323 324 2.322081 CCGACACCGAACCGCAAAT 61.322 57.895 0.00 0.00 38.22 2.32
324 325 2.968156 CCGACACCGAACCGCAAA 60.968 61.111 0.00 0.00 38.22 3.68
325 326 3.851845 CTCCGACACCGAACCGCAA 62.852 63.158 0.00 0.00 38.22 4.85
326 327 4.351938 CTCCGACACCGAACCGCA 62.352 66.667 0.00 0.00 38.22 5.69
327 328 3.352338 ATCTCCGACACCGAACCGC 62.352 63.158 0.00 0.00 38.22 5.68
328 329 1.516386 CATCTCCGACACCGAACCG 60.516 63.158 0.00 0.00 38.22 4.44
329 330 1.810030 GCATCTCCGACACCGAACC 60.810 63.158 0.00 0.00 38.22 3.62
330 331 2.158959 CGCATCTCCGACACCGAAC 61.159 63.158 0.00 0.00 38.22 3.95
331 332 2.180769 CGCATCTCCGACACCGAA 59.819 61.111 0.00 0.00 38.22 4.30
332 333 4.492160 GCGCATCTCCGACACCGA 62.492 66.667 0.30 0.00 38.22 4.69
333 334 3.989698 AAGCGCATCTCCGACACCG 62.990 63.158 11.47 0.00 0.00 4.94
334 335 2.125512 AAGCGCATCTCCGACACC 60.126 61.111 11.47 0.00 0.00 4.16
335 336 2.456119 CCAAGCGCATCTCCGACAC 61.456 63.158 11.47 0.00 0.00 3.67
336 337 2.125552 CCAAGCGCATCTCCGACA 60.126 61.111 11.47 0.00 0.00 4.35
337 338 1.424493 CTTCCAAGCGCATCTCCGAC 61.424 60.000 11.47 0.00 0.00 4.79
338 339 1.153568 CTTCCAAGCGCATCTCCGA 60.154 57.895 11.47 0.00 0.00 4.55
339 340 2.817423 GCTTCCAAGCGCATCTCCG 61.817 63.158 11.47 0.00 42.88 4.63
340 341 3.105659 GCTTCCAAGCGCATCTCC 58.894 61.111 11.47 0.00 42.88 3.71
354 355 1.626654 CGACCGCGTGAAGATTGCTT 61.627 55.000 4.92 0.00 36.96 3.91
355 356 2.094659 CGACCGCGTGAAGATTGCT 61.095 57.895 4.92 0.00 0.00 3.91
356 357 2.014093 CTCGACCGCGTGAAGATTGC 62.014 60.000 4.92 0.00 38.98 3.56
357 358 0.456142 TCTCGACCGCGTGAAGATTG 60.456 55.000 4.92 0.00 37.12 2.67
358 359 0.456221 ATCTCGACCGCGTGAAGATT 59.544 50.000 4.92 0.00 42.39 2.40
359 360 0.456221 AATCTCGACCGCGTGAAGAT 59.544 50.000 4.92 5.05 42.39 2.40
360 361 0.456142 CAATCTCGACCGCGTGAAGA 60.456 55.000 4.92 2.59 42.39 2.87
361 362 0.732880 ACAATCTCGACCGCGTGAAG 60.733 55.000 4.92 0.00 42.39 3.02
362 363 0.319211 AACAATCTCGACCGCGTGAA 60.319 50.000 4.92 0.00 42.39 3.18
363 364 0.522626 TAACAATCTCGACCGCGTGA 59.477 50.000 4.92 0.00 43.14 4.35
364 365 1.342555 TTAACAATCTCGACCGCGTG 58.657 50.000 4.92 0.00 38.98 5.34
365 366 2.068837 TTTAACAATCTCGACCGCGT 57.931 45.000 4.92 0.00 38.98 6.01
366 367 3.443054 TTTTTAACAATCTCGACCGCG 57.557 42.857 0.00 0.00 39.35 6.46
385 386 9.328845 ACATTGAACTTGCAGTTTCAATTATTT 57.671 25.926 24.46 12.96 38.80 1.40
386 387 8.891671 ACATTGAACTTGCAGTTTCAATTATT 57.108 26.923 24.46 14.62 38.80 1.40
387 388 8.891671 AACATTGAACTTGCAGTTTCAATTAT 57.108 26.923 24.46 17.05 38.80 1.28
388 389 8.715191 AAACATTGAACTTGCAGTTTCAATTA 57.285 26.923 24.46 8.86 38.80 1.40
389 390 7.614124 AAACATTGAACTTGCAGTTTCAATT 57.386 28.000 24.46 15.14 38.80 2.32
390 391 8.715191 TTAAACATTGAACTTGCAGTTTCAAT 57.285 26.923 22.61 22.61 38.80 2.57
391 392 8.539770 TTTAAACATTGAACTTGCAGTTTCAA 57.460 26.923 20.77 20.77 38.80 2.69
392 393 8.439286 GTTTTAAACATTGAACTTGCAGTTTCA 58.561 29.630 2.62 7.74 38.80 2.69
393 394 7.630606 CGTTTTAAACATTGAACTTGCAGTTTC 59.369 33.333 8.61 1.75 38.80 2.78
394 395 7.117092 ACGTTTTAAACATTGAACTTGCAGTTT 59.883 29.630 8.61 3.07 38.80 2.66
395 396 6.588373 ACGTTTTAAACATTGAACTTGCAGTT 59.412 30.769 8.61 1.82 41.95 3.16
396 397 6.096695 ACGTTTTAAACATTGAACTTGCAGT 58.903 32.000 8.61 0.00 0.00 4.40
397 398 6.567769 ACGTTTTAAACATTGAACTTGCAG 57.432 33.333 8.61 0.00 0.00 4.41
398 399 7.251994 AGTACGTTTTAAACATTGAACTTGCA 58.748 30.769 8.61 0.00 0.00 4.08
399 400 7.673810 AGTACGTTTTAAACATTGAACTTGC 57.326 32.000 8.61 0.00 0.00 4.01
400 401 9.925268 AGTAGTACGTTTTAAACATTGAACTTG 57.075 29.630 8.61 0.00 0.00 3.16
404 405 9.224058 GCAAAGTAGTACGTTTTAAACATTGAA 57.776 29.630 8.61 0.00 0.00 2.69
405 406 8.396390 TGCAAAGTAGTACGTTTTAAACATTGA 58.604 29.630 8.61 0.00 0.00 2.57
406 407 8.549777 TGCAAAGTAGTACGTTTTAAACATTG 57.450 30.769 8.61 0.00 0.00 2.82
407 408 9.738832 AATGCAAAGTAGTACGTTTTAAACATT 57.261 25.926 8.61 3.05 0.00 2.71
408 409 9.738832 AAATGCAAAGTAGTACGTTTTAAACAT 57.261 25.926 8.61 0.00 0.00 2.71
409 410 9.570488 AAAATGCAAAGTAGTACGTTTTAAACA 57.430 25.926 8.61 0.00 31.34 2.83
414 415 9.187455 CCAATAAAATGCAAAGTAGTACGTTTT 57.813 29.630 0.00 0.00 35.84 2.43
415 416 7.327518 GCCAATAAAATGCAAAGTAGTACGTTT 59.672 33.333 0.00 0.00 0.00 3.60
416 417 6.804783 GCCAATAAAATGCAAAGTAGTACGTT 59.195 34.615 0.00 0.00 0.00 3.99
417 418 6.150474 AGCCAATAAAATGCAAAGTAGTACGT 59.850 34.615 0.00 0.00 0.00 3.57
418 419 6.551736 AGCCAATAAAATGCAAAGTAGTACG 58.448 36.000 0.00 0.00 0.00 3.67
419 420 9.849166 TTTAGCCAATAAAATGCAAAGTAGTAC 57.151 29.630 0.00 0.00 30.28 2.73
424 425 9.546428 GGATATTTAGCCAATAAAATGCAAAGT 57.454 29.630 0.00 0.00 36.94 2.66
425 426 9.545105 TGGATATTTAGCCAATAAAATGCAAAG 57.455 29.630 0.00 0.00 39.09 2.77
426 427 9.896645 TTGGATATTTAGCCAATAAAATGCAAA 57.103 25.926 3.25 0.00 45.85 3.68
450 451 3.374058 GGATCGAACACCAACTACCATTG 59.626 47.826 0.00 0.00 0.00 2.82
451 452 3.606687 GGATCGAACACCAACTACCATT 58.393 45.455 0.00 0.00 0.00 3.16
452 453 2.418197 CGGATCGAACACCAACTACCAT 60.418 50.000 0.00 0.00 0.00 3.55
453 454 1.067425 CGGATCGAACACCAACTACCA 60.067 52.381 0.00 0.00 0.00 3.25
454 455 1.636988 CGGATCGAACACCAACTACC 58.363 55.000 0.00 0.00 0.00 3.18
455 456 1.203052 TCCGGATCGAACACCAACTAC 59.797 52.381 0.00 0.00 0.00 2.73
456 457 1.475280 CTCCGGATCGAACACCAACTA 59.525 52.381 3.57 0.00 0.00 2.24
457 458 0.246635 CTCCGGATCGAACACCAACT 59.753 55.000 3.57 0.00 0.00 3.16
458 459 0.245539 TCTCCGGATCGAACACCAAC 59.754 55.000 3.57 0.00 0.00 3.77
459 460 0.245539 GTCTCCGGATCGAACACCAA 59.754 55.000 3.57 0.00 0.00 3.67
460 461 0.896479 TGTCTCCGGATCGAACACCA 60.896 55.000 3.57 0.00 0.00 4.17
461 462 0.460311 ATGTCTCCGGATCGAACACC 59.540 55.000 3.57 0.00 0.00 4.16
462 463 1.405821 AGATGTCTCCGGATCGAACAC 59.594 52.381 3.57 3.33 0.00 3.32
463 464 1.763968 AGATGTCTCCGGATCGAACA 58.236 50.000 3.57 8.11 0.00 3.18
470 471 3.885901 CTGTAGATCAAGATGTCTCCGGA 59.114 47.826 2.93 2.93 0.00 5.14
479 480 6.887013 AGAGCATTTGACTGTAGATCAAGAT 58.113 36.000 0.00 0.00 37.38 2.40
485 486 5.423610 AGTGGTAGAGCATTTGACTGTAGAT 59.576 40.000 0.00 0.00 0.00 1.98
486 487 4.772624 AGTGGTAGAGCATTTGACTGTAGA 59.227 41.667 0.00 0.00 0.00 2.59
487 488 5.078411 AGTGGTAGAGCATTTGACTGTAG 57.922 43.478 0.00 0.00 0.00 2.74
488 489 6.599356 TTAGTGGTAGAGCATTTGACTGTA 57.401 37.500 0.00 0.00 0.00 2.74
489 490 5.482908 CTTAGTGGTAGAGCATTTGACTGT 58.517 41.667 0.00 0.00 0.00 3.55
500 501 3.574826 GGGTCCATAGCTTAGTGGTAGAG 59.425 52.174 10.98 0.00 36.84 2.43
582 583 6.314896 CACATCTGAATTGGTCTTTCTACTCC 59.685 42.308 0.00 0.00 0.00 3.85
746 747 2.287608 GGGAAGTTTTGGAGTTTGCTCG 60.288 50.000 0.00 0.00 42.53 5.03
913 923 1.640917 GAACTGGGACTCTGGTGGTA 58.359 55.000 0.00 0.00 0.00 3.25
916 926 1.127567 TGGGAACTGGGACTCTGGTG 61.128 60.000 0.00 0.00 0.00 4.17
917 927 0.838122 CTGGGAACTGGGACTCTGGT 60.838 60.000 0.00 0.00 0.00 4.00
937 947 8.863086 TGAGTGATTGATATCAGATGTGTATGA 58.137 33.333 5.39 0.00 41.33 2.15
953 963 1.804601 CAGCAGCTGTGAGTGATTGA 58.195 50.000 16.64 0.00 0.00 2.57
975 985 1.306642 CCTCTTCTTGCCTGCTGCTG 61.307 60.000 0.00 0.00 42.00 4.41
999 1010 0.463295 CCAGATCGAGCTGTGGCATT 60.463 55.000 27.39 0.00 41.70 3.56
1088 1099 2.504244 CGTCAACGTCGGAGGCTC 60.504 66.667 5.78 5.78 34.11 4.70
1131 1142 0.694444 ACCAGGCCCAGATAATCCGT 60.694 55.000 0.00 0.00 0.00 4.69
1198 1209 1.971695 CGTTCTTGGGGTTGGAGCC 60.972 63.158 0.00 0.00 34.31 4.70
1377 1391 2.437180 TCGCTCGCGAAGACCCTA 60.437 61.111 11.33 0.00 46.01 3.53
1478 1528 3.024356 TCCGCTCCTCCTCCTCCT 61.024 66.667 0.00 0.00 0.00 3.69
1528 1587 2.661537 GCCGCACAAAAAGCCACC 60.662 61.111 0.00 0.00 0.00 4.61
1574 1633 2.126914 CGATTCACTCGTCCCAGATC 57.873 55.000 0.00 0.00 42.56 2.75
1623 1682 0.318784 GCGACAGGACTGAAACGTCT 60.319 55.000 6.29 0.00 34.38 4.18
1662 1721 2.584391 GGGCTTCACGTCTCCCAGT 61.584 63.158 6.17 0.00 38.62 4.00
2285 2349 2.125673 CAGTTCCCGTGCCTACCG 60.126 66.667 0.00 0.00 0.00 4.02
2301 2365 0.871722 GCAACCGTGAATGTACAGCA 59.128 50.000 0.33 0.00 0.00 4.41
2325 2389 5.271625 CAGGCAAGTACACGTACTACTATG 58.728 45.833 10.16 6.38 44.96 2.23
2326 2390 4.201990 GCAGGCAAGTACACGTACTACTAT 60.202 45.833 10.16 0.00 44.96 2.12
2327 2391 3.127548 GCAGGCAAGTACACGTACTACTA 59.872 47.826 10.16 0.00 44.96 1.82
2328 2392 2.094854 GCAGGCAAGTACACGTACTACT 60.095 50.000 10.16 6.76 44.96 2.57
2329 2393 2.094854 AGCAGGCAAGTACACGTACTAC 60.095 50.000 10.16 6.11 44.96 2.73
2330 2394 2.165167 AGCAGGCAAGTACACGTACTA 58.835 47.619 10.16 0.00 44.96 1.82
2332 2396 1.459592 CAAGCAGGCAAGTACACGTAC 59.540 52.381 0.00 0.00 36.35 3.67
2333 2397 1.790755 CAAGCAGGCAAGTACACGTA 58.209 50.000 0.00 0.00 0.00 3.57
2335 2399 1.207593 GCAAGCAGGCAAGTACACG 59.792 57.895 0.00 0.00 0.00 4.49
2336 2400 1.207593 CGCAAGCAGGCAAGTACAC 59.792 57.895 0.00 0.00 0.00 2.90
2337 2401 3.654201 CGCAAGCAGGCAAGTACA 58.346 55.556 0.00 0.00 0.00 2.90
2375 2439 3.063510 TGCACAAGAGGAGATCAAAGG 57.936 47.619 0.00 0.00 0.00 3.11
2378 2442 3.754850 CACAATGCACAAGAGGAGATCAA 59.245 43.478 0.00 0.00 0.00 2.57
2385 2449 2.684881 GGGATACACAATGCACAAGAGG 59.315 50.000 0.00 0.00 39.74 3.69
2390 2454 1.029408 GGCGGGATACACAATGCACA 61.029 55.000 0.00 0.00 39.74 4.57
2396 2460 0.034863 GAAAGGGGCGGGATACACAA 60.035 55.000 0.00 0.00 39.74 3.33
2408 2475 3.440522 GCTAGCTGTACAAAAGAAAGGGG 59.559 47.826 7.70 0.00 0.00 4.79
2410 2477 5.062308 CGTAGCTAGCTGTACAAAAGAAAGG 59.938 44.000 27.68 4.34 0.00 3.11
2430 2497 0.179000 ATGGAAGGAAGCAGGCGTAG 59.821 55.000 0.00 0.00 0.00 3.51
2431 2498 0.107703 CATGGAAGGAAGCAGGCGTA 60.108 55.000 0.00 0.00 0.00 4.42
2432 2499 1.377725 CATGGAAGGAAGCAGGCGT 60.378 57.895 0.00 0.00 0.00 5.68
2433 2500 0.107703 TACATGGAAGGAAGCAGGCG 60.108 55.000 0.00 0.00 0.00 5.52
2434 2501 1.383523 GTACATGGAAGGAAGCAGGC 58.616 55.000 0.00 0.00 0.00 4.85
2435 2502 1.656652 CGTACATGGAAGGAAGCAGG 58.343 55.000 0.00 0.00 0.00 4.85
2436 2503 1.656652 CCGTACATGGAAGGAAGCAG 58.343 55.000 3.34 0.00 0.00 4.24
2437 2504 0.251916 CCCGTACATGGAAGGAAGCA 59.748 55.000 12.08 0.00 0.00 3.91
2438 2505 1.095807 GCCCGTACATGGAAGGAAGC 61.096 60.000 12.08 3.32 0.00 3.86
2439 2506 0.810031 CGCCCGTACATGGAAGGAAG 60.810 60.000 12.08 0.79 0.00 3.46
2440 2507 1.219664 CGCCCGTACATGGAAGGAA 59.780 57.895 12.08 0.00 0.00 3.36
2441 2508 2.897207 CGCCCGTACATGGAAGGA 59.103 61.111 12.08 0.00 0.00 3.36
2442 2509 2.895372 GCGCCCGTACATGGAAGG 60.895 66.667 2.30 2.30 0.00 3.46
2443 2510 1.705337 CTTGCGCCCGTACATGGAAG 61.705 60.000 4.18 0.00 0.00 3.46
2444 2511 1.743623 CTTGCGCCCGTACATGGAA 60.744 57.895 4.18 0.00 0.00 3.53
2445 2512 2.125310 CTTGCGCCCGTACATGGA 60.125 61.111 4.18 0.00 0.00 3.41
2446 2513 3.876198 GCTTGCGCCCGTACATGG 61.876 66.667 4.18 0.00 0.00 3.66
2447 2514 3.099619 CTGCTTGCGCCCGTACATG 62.100 63.158 4.18 0.00 34.43 3.21
2448 2515 2.819595 CTGCTTGCGCCCGTACAT 60.820 61.111 4.18 0.00 34.43 2.29
2450 2517 3.652539 TACCTGCTTGCGCCCGTAC 62.653 63.158 4.18 0.00 34.43 3.67
2451 2518 2.451928 TTTACCTGCTTGCGCCCGTA 62.452 55.000 4.18 0.00 34.43 4.02
2452 2519 3.835790 TTTACCTGCTTGCGCCCGT 62.836 57.895 4.18 0.00 34.43 5.28
2453 2520 1.933115 ATTTTACCTGCTTGCGCCCG 61.933 55.000 4.18 0.00 34.43 6.13
2454 2521 0.179137 GATTTTACCTGCTTGCGCCC 60.179 55.000 4.18 0.00 34.43 6.13
2455 2522 0.523335 CGATTTTACCTGCTTGCGCC 60.523 55.000 4.18 0.00 34.43 6.53
2456 2523 0.523335 CCGATTTTACCTGCTTGCGC 60.523 55.000 0.00 0.00 0.00 6.09
2457 2524 0.802494 ACCGATTTTACCTGCTTGCG 59.198 50.000 0.00 0.00 0.00 4.85
2458 2525 1.539827 ACACCGATTTTACCTGCTTGC 59.460 47.619 0.00 0.00 0.00 4.01
2459 2526 3.181524 CGTACACCGATTTTACCTGCTTG 60.182 47.826 0.00 0.00 39.56 4.01
2460 2527 2.997986 CGTACACCGATTTTACCTGCTT 59.002 45.455 0.00 0.00 39.56 3.91
2461 2528 2.028748 ACGTACACCGATTTTACCTGCT 60.029 45.455 0.00 0.00 40.70 4.24
2462 2529 2.340337 ACGTACACCGATTTTACCTGC 58.660 47.619 0.00 0.00 40.70 4.85
2463 2530 4.737054 ACTACGTACACCGATTTTACCTG 58.263 43.478 0.00 0.00 40.70 4.00
2464 2531 5.648092 ACTACTACGTACACCGATTTTACCT 59.352 40.000 0.00 0.00 40.70 3.08
2465 2532 5.880341 ACTACTACGTACACCGATTTTACC 58.120 41.667 0.00 0.00 40.70 2.85
2466 2533 8.335356 TGATACTACTACGTACACCGATTTTAC 58.665 37.037 0.00 0.00 40.70 2.01
2467 2534 8.432110 TGATACTACTACGTACACCGATTTTA 57.568 34.615 0.00 0.00 40.70 1.52
2468 2535 7.320443 TGATACTACTACGTACACCGATTTT 57.680 36.000 0.00 0.00 40.70 1.82
2469 2536 6.925610 TGATACTACTACGTACACCGATTT 57.074 37.500 0.00 0.00 40.70 2.17
2470 2537 7.012704 ACAATGATACTACTACGTACACCGATT 59.987 37.037 0.00 0.00 40.70 3.34
2471 2538 6.484643 ACAATGATACTACTACGTACACCGAT 59.515 38.462 0.00 0.00 40.70 4.18
2472 2539 5.817296 ACAATGATACTACTACGTACACCGA 59.183 40.000 0.00 0.00 40.70 4.69
2473 2540 5.905733 CACAATGATACTACTACGTACACCG 59.094 44.000 0.00 0.00 44.03 4.94
2474 2541 5.684626 GCACAATGATACTACTACGTACACC 59.315 44.000 0.00 0.00 0.00 4.16
2475 2542 5.394613 CGCACAATGATACTACTACGTACAC 59.605 44.000 0.00 0.00 0.00 2.90
2476 2543 5.294060 TCGCACAATGATACTACTACGTACA 59.706 40.000 0.00 0.00 0.00 2.90
2477 2544 5.741425 TCGCACAATGATACTACTACGTAC 58.259 41.667 0.00 0.00 0.00 3.67
2478 2545 5.989551 TCGCACAATGATACTACTACGTA 57.010 39.130 0.00 0.00 0.00 3.57
2479 2546 4.888038 TCGCACAATGATACTACTACGT 57.112 40.909 0.00 0.00 0.00 3.57
2480 2547 6.397584 CGATTTCGCACAATGATACTACTACG 60.398 42.308 0.00 0.00 0.00 3.51
2499 2573 6.915843 ACATACAAAAGTCAAACACCGATTTC 59.084 34.615 0.00 0.00 0.00 2.17
2524 2598 6.542370 CCCAAAGAAAGAGTGAAGTGAAAGTA 59.458 38.462 0.00 0.00 0.00 2.24
2526 2600 5.221126 CCCCAAAGAAAGAGTGAAGTGAAAG 60.221 44.000 0.00 0.00 0.00 2.62
2569 2643 4.451629 TTCTTTATCTCCGACCAGTGAC 57.548 45.455 0.00 0.00 0.00 3.67
2584 2658 7.777095 AGTACACATTGCCTTTGTTTTCTTTA 58.223 30.769 0.00 0.00 0.00 1.85
2586 2660 6.220726 AGTACACATTGCCTTTGTTTTCTT 57.779 33.333 0.00 0.00 0.00 2.52
2587 2661 5.852282 AGTACACATTGCCTTTGTTTTCT 57.148 34.783 0.00 0.00 0.00 2.52
2588 2662 6.735130 AGTAGTACACATTGCCTTTGTTTTC 58.265 36.000 2.52 0.00 0.00 2.29
2617 2691 4.028490 TGGCGCCCCAACCACTAG 62.028 66.667 26.77 0.00 38.46 2.57
2634 2708 4.335647 CAAGAGGCGCCACCAGGT 62.336 66.667 31.54 6.18 43.14 4.00
2635 2709 3.335356 ATCAAGAGGCGCCACCAGG 62.335 63.158 31.54 14.70 43.14 4.45
2636 2710 2.110967 CATCAAGAGGCGCCACCAG 61.111 63.158 31.54 17.73 43.14 4.00
2637 2711 2.046023 CATCAAGAGGCGCCACCA 60.046 61.111 31.54 9.88 43.14 4.17
2638 2712 3.512516 GCATCAAGAGGCGCCACC 61.513 66.667 31.54 20.10 39.61 4.61
2639 2713 2.747460 TGCATCAAGAGGCGCCAC 60.747 61.111 31.54 24.27 41.64 5.01
2640 2714 2.437180 CTGCATCAAGAGGCGCCA 60.437 61.111 31.54 7.75 41.64 5.69
2641 2715 2.955022 ATCCTGCATCAAGAGGCGCC 62.955 60.000 21.89 21.89 41.64 6.53
2642 2716 1.099879 AATCCTGCATCAAGAGGCGC 61.100 55.000 0.00 0.00 41.64 6.53
2643 2717 0.661552 CAATCCTGCATCAAGAGGCG 59.338 55.000 2.12 0.00 41.64 5.52
2644 2718 1.030457 CCAATCCTGCATCAAGAGGC 58.970 55.000 0.00 0.00 38.80 4.70
2645 2719 1.688772 CCCAATCCTGCATCAAGAGG 58.311 55.000 0.00 0.00 0.00 3.69
2646 2720 1.030457 GCCCAATCCTGCATCAAGAG 58.970 55.000 0.00 0.00 0.00 2.85
2647 2721 0.332293 TGCCCAATCCTGCATCAAGA 59.668 50.000 0.00 0.00 31.31 3.02
2648 2722 0.458669 GTGCCCAATCCTGCATCAAG 59.541 55.000 0.00 0.00 40.07 3.02
2649 2723 0.251698 TGTGCCCAATCCTGCATCAA 60.252 50.000 0.00 0.00 40.07 2.57
2650 2724 0.966875 GTGTGCCCAATCCTGCATCA 60.967 55.000 0.00 0.00 40.07 3.07
2651 2725 0.682209 AGTGTGCCCAATCCTGCATC 60.682 55.000 0.00 0.00 40.07 3.91
2652 2726 0.625316 TAGTGTGCCCAATCCTGCAT 59.375 50.000 0.00 0.00 40.07 3.96
2653 2727 0.403655 TTAGTGTGCCCAATCCTGCA 59.596 50.000 0.00 0.00 34.54 4.41
2654 2728 1.678101 GATTAGTGTGCCCAATCCTGC 59.322 52.381 0.00 0.00 0.00 4.85
2655 2729 3.003394 TGATTAGTGTGCCCAATCCTG 57.997 47.619 0.00 0.00 0.00 3.86
2656 2730 3.737559 TTGATTAGTGTGCCCAATCCT 57.262 42.857 0.00 0.00 0.00 3.24
2657 2731 5.343307 AATTTGATTAGTGTGCCCAATCC 57.657 39.130 0.00 0.00 0.00 3.01
2658 2732 5.105392 TGGAATTTGATTAGTGTGCCCAATC 60.105 40.000 0.00 0.00 0.00 2.67
2659 2733 4.776837 TGGAATTTGATTAGTGTGCCCAAT 59.223 37.500 0.00 0.00 0.00 3.16
2660 2734 4.155709 TGGAATTTGATTAGTGTGCCCAA 58.844 39.130 0.00 0.00 0.00 4.12
2661 2735 3.772387 TGGAATTTGATTAGTGTGCCCA 58.228 40.909 0.00 0.00 0.00 5.36
2662 2736 4.799564 TTGGAATTTGATTAGTGTGCCC 57.200 40.909 0.00 0.00 0.00 5.36
2663 2737 5.812127 GGATTTGGAATTTGATTAGTGTGCC 59.188 40.000 0.00 0.00 0.00 5.01
2664 2738 6.311200 GTGGATTTGGAATTTGATTAGTGTGC 59.689 38.462 0.00 0.00 0.00 4.57
2665 2739 7.605449 AGTGGATTTGGAATTTGATTAGTGTG 58.395 34.615 0.00 0.00 0.00 3.82
2666 2740 7.781324 AGTGGATTTGGAATTTGATTAGTGT 57.219 32.000 0.00 0.00 0.00 3.55
2667 2741 8.928733 CAAAGTGGATTTGGAATTTGATTAGTG 58.071 33.333 0.00 0.00 43.88 2.74
2682 2756 7.738437 ATGGGATTATGAACAAAGTGGATTT 57.262 32.000 0.00 0.00 0.00 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.