Multiple sequence alignment - TraesCS2B01G308700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G308700 chr2B 100.000 3008 0 0 1 3008 441872067 441875074 0.000000e+00 5555.0
1 TraesCS2B01G308700 chr2D 93.079 2153 71 22 642 2755 372321625 372323738 0.000000e+00 3079.0
2 TraesCS2B01G308700 chr2D 83.381 349 13 12 1 335 372321310 372321627 6.350000e-72 281.0
3 TraesCS2B01G308700 chr2A 90.845 2130 105 41 807 2885 503453917 503456007 0.000000e+00 2771.0
4 TraesCS2B01G308700 chr2A 80.119 337 18 13 31 335 503453509 503453828 3.930000e-49 206.0
5 TraesCS2B01G308700 chr2A 100.000 48 0 0 727 774 503453873 503453920 4.130000e-14 89.8
6 TraesCS2B01G308700 chr3A 98.738 317 3 1 329 645 51751570 51751885 2.020000e-156 562.0
7 TraesCS2B01G308700 chr1A 98.413 315 4 1 332 645 261368708 261368394 1.220000e-153 553.0
8 TraesCS2B01G308700 chr1A 98.077 312 6 0 336 647 309691857 309691546 7.330000e-151 544.0
9 TraesCS2B01G308700 chr7B 98.408 314 4 1 332 645 462883217 462882905 4.380000e-153 551.0
10 TraesCS2B01G308700 chr7B 97.771 314 7 0 336 649 51911329 51911016 2.640000e-150 542.0
11 TraesCS2B01G308700 chr6A 98.710 310 4 0 337 646 359051268 359050959 4.380000e-153 551.0
12 TraesCS2B01G308700 chr4B 98.403 313 4 1 333 645 385922982 385922671 1.580000e-152 549.0
13 TraesCS2B01G308700 chr5B 98.701 308 4 0 338 645 641808571 641808264 5.670000e-152 547.0
14 TraesCS2B01G308700 chr4A 97.771 314 6 1 333 646 590230532 590230220 9.490000e-150 540.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G308700 chr2B 441872067 441875074 3007 False 5555.000000 5555 100.000000 1 3008 1 chr2B.!!$F1 3007
1 TraesCS2B01G308700 chr2D 372321310 372323738 2428 False 1680.000000 3079 88.230000 1 2755 2 chr2D.!!$F1 2754
2 TraesCS2B01G308700 chr2A 503453509 503456007 2498 False 1022.266667 2771 90.321333 31 2885 3 chr2A.!!$F1 2854

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
719 762 0.0293 TCGAGCACAAGCACAAAAGC 59.971 50.0 0.0 0.0 45.49 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2495 2606 0.106708 TTATCCTCATCTGCACCCGC 59.893 55.0 0.0 0.0 39.24 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.818274 CCGTTTCGCCCCTACAGC 60.818 66.667 0.00 0.00 0.00 4.40
20 21 0.804933 CGTTTCGCCCCTACAGCTAC 60.805 60.000 0.00 0.00 0.00 3.58
21 22 0.248289 GTTTCGCCCCTACAGCTACA 59.752 55.000 0.00 0.00 0.00 2.74
22 23 0.535335 TTTCGCCCCTACAGCTACAG 59.465 55.000 0.00 0.00 0.00 2.74
24 25 2.058595 CGCCCCTACAGCTACAGGT 61.059 63.158 10.96 0.00 0.00 4.00
27 28 1.522569 CCCTACAGCTACAGGTGCC 59.477 63.158 8.29 0.00 46.62 5.01
28 29 1.141881 CCTACAGCTACAGGTGCCG 59.858 63.158 8.29 0.30 46.62 5.69
77 78 4.142160 GGCCATTTAGGAAAGCAGTAAAGG 60.142 45.833 0.00 0.00 41.22 3.11
80 81 4.382386 TTTAGGAAAGCAGTAAAGGCCT 57.618 40.909 0.00 0.00 0.00 5.19
136 137 1.347050 CTGCCTGACTGCTATGCCTAT 59.653 52.381 0.00 0.00 0.00 2.57
144 151 4.082845 GACTGCTATGCCTATGAGGACTA 58.917 47.826 0.00 0.00 37.67 2.59
146 153 5.832221 ACTGCTATGCCTATGAGGACTATA 58.168 41.667 0.00 0.00 37.67 1.31
151 158 6.834451 GCTATGCCTATGAGGACTATAGGTTA 59.166 42.308 4.43 3.75 45.82 2.85
169 176 3.691118 GGTTATTCCTTCCGTTTACCCAC 59.309 47.826 0.00 0.00 0.00 4.61
170 177 4.566278 GGTTATTCCTTCCGTTTACCCACT 60.566 45.833 0.00 0.00 0.00 4.00
171 178 2.845363 TTCCTTCCGTTTACCCACTC 57.155 50.000 0.00 0.00 0.00 3.51
177 184 3.116079 TCCGTTTACCCACTCTGTTTC 57.884 47.619 0.00 0.00 0.00 2.78
310 345 4.592351 TCTCCACTAGCGACCTACTACTAT 59.408 45.833 0.00 0.00 0.00 2.12
320 355 8.101654 AGCGACCTACTACTATTGATAAGAAG 57.898 38.462 0.00 0.00 0.00 2.85
321 356 7.937942 AGCGACCTACTACTATTGATAAGAAGA 59.062 37.037 0.00 0.00 0.00 2.87
340 375 8.922931 AAGAAGAACTACTACTACTATAGGCC 57.077 38.462 4.43 0.00 0.00 5.19
341 376 8.278988 AGAAGAACTACTACTACTATAGGCCT 57.721 38.462 11.78 11.78 0.00 5.19
342 377 8.377799 AGAAGAACTACTACTACTATAGGCCTC 58.622 40.741 9.68 0.00 0.00 4.70
343 378 7.019656 AGAACTACTACTACTATAGGCCTCC 57.980 44.000 9.68 0.00 0.00 4.30
344 379 6.793988 AGAACTACTACTACTATAGGCCTCCT 59.206 42.308 9.68 0.00 37.71 3.69
345 380 7.295434 AGAACTACTACTACTATAGGCCTCCTT 59.705 40.741 9.68 0.00 34.61 3.36
346 381 7.405228 ACTACTACTACTATAGGCCTCCTTT 57.595 40.000 9.68 0.00 34.61 3.11
347 382 7.232910 ACTACTACTACTATAGGCCTCCTTTG 58.767 42.308 9.68 0.00 34.61 2.77
348 383 5.395611 ACTACTACTATAGGCCTCCTTTGG 58.604 45.833 9.68 0.00 34.61 3.28
349 384 4.282292 ACTACTATAGGCCTCCTTTGGT 57.718 45.455 9.68 3.72 34.61 3.67
350 385 4.632292 ACTACTATAGGCCTCCTTTGGTT 58.368 43.478 9.68 0.00 34.61 3.67
351 386 5.037598 ACTACTATAGGCCTCCTTTGGTTT 58.962 41.667 9.68 0.00 34.61 3.27
352 387 4.236527 ACTATAGGCCTCCTTTGGTTTG 57.763 45.455 9.68 0.00 34.61 2.93
353 388 2.532250 ATAGGCCTCCTTTGGTTTGG 57.468 50.000 9.68 0.00 34.61 3.28
354 389 1.451449 TAGGCCTCCTTTGGTTTGGA 58.549 50.000 9.68 0.00 34.61 3.53
355 390 0.113190 AGGCCTCCTTTGGTTTGGAG 59.887 55.000 0.00 0.00 46.91 3.86
362 397 5.551305 CTCCTTTGGTTTGGAGGAATTTT 57.449 39.130 0.00 0.00 44.44 1.82
363 398 6.664428 CTCCTTTGGTTTGGAGGAATTTTA 57.336 37.500 0.00 0.00 44.44 1.52
364 399 7.244886 CTCCTTTGGTTTGGAGGAATTTTAT 57.755 36.000 0.00 0.00 44.44 1.40
365 400 8.361169 CTCCTTTGGTTTGGAGGAATTTTATA 57.639 34.615 0.00 0.00 44.44 0.98
366 401 8.361169 TCCTTTGGTTTGGAGGAATTTTATAG 57.639 34.615 0.00 0.00 36.67 1.31
367 402 7.398904 TCCTTTGGTTTGGAGGAATTTTATAGG 59.601 37.037 0.00 0.00 36.67 2.57
368 403 7.398904 CCTTTGGTTTGGAGGAATTTTATAGGA 59.601 37.037 0.00 0.00 32.11 2.94
369 404 8.909423 TTTGGTTTGGAGGAATTTTATAGGAT 57.091 30.769 0.00 0.00 0.00 3.24
370 405 8.909423 TTGGTTTGGAGGAATTTTATAGGATT 57.091 30.769 0.00 0.00 0.00 3.01
371 406 8.909423 TGGTTTGGAGGAATTTTATAGGATTT 57.091 30.769 0.00 0.00 0.00 2.17
372 407 9.332713 TGGTTTGGAGGAATTTTATAGGATTTT 57.667 29.630 0.00 0.00 0.00 1.82
373 408 9.817809 GGTTTGGAGGAATTTTATAGGATTTTC 57.182 33.333 0.00 0.00 0.00 2.29
412 447 9.965902 TTCTATAGGAAAAATTCTTTCAGAGCT 57.034 29.630 0.00 0.00 0.00 4.09
413 448 9.606631 TCTATAGGAAAAATTCTTTCAGAGCTC 57.393 33.333 5.27 5.27 0.00 4.09
414 449 9.612066 CTATAGGAAAAATTCTTTCAGAGCTCT 57.388 33.333 11.45 11.45 0.00 4.09
415 450 8.876303 ATAGGAAAAATTCTTTCAGAGCTCTT 57.124 30.769 15.27 0.00 0.00 2.85
416 451 7.594351 AGGAAAAATTCTTTCAGAGCTCTTT 57.406 32.000 15.27 1.02 0.00 2.52
417 452 7.432059 AGGAAAAATTCTTTCAGAGCTCTTTG 58.568 34.615 15.27 4.87 0.00 2.77
418 453 6.644181 GGAAAAATTCTTTCAGAGCTCTTTGG 59.356 38.462 15.27 2.92 0.00 3.28
419 454 6.721704 AAAATTCTTTCAGAGCTCTTTGGT 57.278 33.333 15.27 0.00 0.00 3.67
420 455 6.721704 AAATTCTTTCAGAGCTCTTTGGTT 57.278 33.333 15.27 0.17 0.00 3.67
421 456 6.721704 AATTCTTTCAGAGCTCTTTGGTTT 57.278 33.333 15.27 0.00 0.00 3.27
422 457 5.505173 TTCTTTCAGAGCTCTTTGGTTTG 57.495 39.130 15.27 1.50 0.00 2.93
423 458 4.526970 TCTTTCAGAGCTCTTTGGTTTGT 58.473 39.130 15.27 0.00 31.30 2.83
424 459 5.680619 TCTTTCAGAGCTCTTTGGTTTGTA 58.319 37.500 15.27 0.00 31.30 2.41
425 460 5.760253 TCTTTCAGAGCTCTTTGGTTTGTAG 59.240 40.000 15.27 0.00 31.30 2.74
426 461 4.008074 TCAGAGCTCTTTGGTTTGTAGG 57.992 45.455 15.27 0.00 31.30 3.18
427 462 3.646162 TCAGAGCTCTTTGGTTTGTAGGA 59.354 43.478 15.27 0.20 31.30 2.94
428 463 4.102524 TCAGAGCTCTTTGGTTTGTAGGAA 59.897 41.667 15.27 0.00 31.30 3.36
429 464 5.006386 CAGAGCTCTTTGGTTTGTAGGAAT 58.994 41.667 15.27 0.00 0.00 3.01
430 465 5.006386 AGAGCTCTTTGGTTTGTAGGAATG 58.994 41.667 11.45 0.00 0.00 2.67
431 466 4.985538 AGCTCTTTGGTTTGTAGGAATGA 58.014 39.130 0.00 0.00 0.00 2.57
432 467 5.385198 AGCTCTTTGGTTTGTAGGAATGAA 58.615 37.500 0.00 0.00 0.00 2.57
433 468 5.833131 AGCTCTTTGGTTTGTAGGAATGAAA 59.167 36.000 0.00 0.00 0.00 2.69
434 469 6.494835 AGCTCTTTGGTTTGTAGGAATGAAAT 59.505 34.615 0.00 0.00 0.00 2.17
435 470 6.808704 GCTCTTTGGTTTGTAGGAATGAAATC 59.191 38.462 0.00 0.00 0.00 2.17
436 471 7.227049 TCTTTGGTTTGTAGGAATGAAATCC 57.773 36.000 0.00 0.00 39.96 3.01
450 485 7.922382 GGAATGAAATCCTATTCCTATGGAGA 58.078 38.462 8.37 0.00 45.66 3.71
451 486 8.386264 GGAATGAAATCCTATTCCTATGGAGAA 58.614 37.037 8.37 0.00 45.66 2.87
452 487 9.799106 GAATGAAATCCTATTCCTATGGAGAAA 57.201 33.333 0.00 0.00 32.95 2.52
455 490 9.799106 TGAAATCCTATTCCTATGGAGAAATTC 57.201 33.333 0.00 0.00 32.95 2.17
459 494 7.978925 TCCTATTCCTATGGAGAAATTCTTCC 58.021 38.462 0.00 2.15 31.21 3.46
460 495 7.796637 TCCTATTCCTATGGAGAAATTCTTCCT 59.203 37.037 0.00 0.00 31.21 3.36
461 496 9.105844 CCTATTCCTATGGAGAAATTCTTCCTA 57.894 37.037 0.00 0.00 31.21 2.94
464 499 7.560796 TCCTATGGAGAAATTCTTCCTATCC 57.439 40.000 0.00 0.00 31.28 2.59
465 500 7.316841 TCCTATGGAGAAATTCTTCCTATCCT 58.683 38.462 0.00 0.00 31.28 3.24
466 501 7.456269 TCCTATGGAGAAATTCTTCCTATCCTC 59.544 40.741 0.00 0.00 31.28 3.71
467 502 5.896073 TGGAGAAATTCTTCCTATCCTCC 57.104 43.478 0.00 0.00 39.38 4.30
468 503 5.288687 TGGAGAAATTCTTCCTATCCTCCA 58.711 41.667 0.00 0.00 44.48 3.86
469 504 5.131142 TGGAGAAATTCTTCCTATCCTCCAC 59.869 44.000 0.00 0.00 42.58 4.02
470 505 5.131142 GGAGAAATTCTTCCTATCCTCCACA 59.869 44.000 0.00 0.00 38.91 4.17
471 506 6.183361 GGAGAAATTCTTCCTATCCTCCACAT 60.183 42.308 0.00 0.00 38.91 3.21
472 507 7.218314 AGAAATTCTTCCTATCCTCCACATT 57.782 36.000 0.00 0.00 31.28 2.71
473 508 7.646884 AGAAATTCTTCCTATCCTCCACATTT 58.353 34.615 0.00 0.00 31.28 2.32
474 509 7.777440 AGAAATTCTTCCTATCCTCCACATTTC 59.223 37.037 0.00 0.00 31.28 2.17
475 510 6.581388 ATTCTTCCTATCCTCCACATTTCA 57.419 37.500 0.00 0.00 0.00 2.69
476 511 6.581388 TTCTTCCTATCCTCCACATTTCAT 57.419 37.500 0.00 0.00 0.00 2.57
477 512 7.690454 TTCTTCCTATCCTCCACATTTCATA 57.310 36.000 0.00 0.00 0.00 2.15
478 513 7.308450 TCTTCCTATCCTCCACATTTCATAG 57.692 40.000 0.00 0.00 0.00 2.23
479 514 6.270927 TCTTCCTATCCTCCACATTTCATAGG 59.729 42.308 0.00 0.00 35.93 2.57
480 515 5.726560 TCCTATCCTCCACATTTCATAGGA 58.273 41.667 2.01 2.01 39.61 2.94
481 516 6.150332 TCCTATCCTCCACATTTCATAGGAA 58.850 40.000 3.47 0.00 39.17 3.36
482 517 6.619437 TCCTATCCTCCACATTTCATAGGAAA 59.381 38.462 4.85 4.85 46.36 3.13
483 518 7.128728 TCCTATCCTCCACATTTCATAGGAAAA 59.871 37.037 6.65 0.00 45.52 2.29
484 519 7.229506 CCTATCCTCCACATTTCATAGGAAAAC 59.770 40.741 6.65 0.00 45.52 2.43
485 520 5.886609 TCCTCCACATTTCATAGGAAAACA 58.113 37.500 6.65 0.00 45.52 2.83
486 521 6.310941 TCCTCCACATTTCATAGGAAAACAA 58.689 36.000 6.65 0.00 45.52 2.83
487 522 6.780031 TCCTCCACATTTCATAGGAAAACAAA 59.220 34.615 6.65 0.00 45.52 2.83
488 523 6.868339 CCTCCACATTTCATAGGAAAACAAAC 59.132 38.462 6.65 0.00 45.52 2.93
489 524 7.353414 TCCACATTTCATAGGAAAACAAACA 57.647 32.000 6.65 0.00 45.52 2.83
490 525 7.961351 TCCACATTTCATAGGAAAACAAACAT 58.039 30.769 6.65 0.00 45.52 2.71
491 526 8.428063 TCCACATTTCATAGGAAAACAAACATT 58.572 29.630 6.65 0.00 45.52 2.71
492 527 9.703892 CCACATTTCATAGGAAAACAAACATTA 57.296 29.630 6.65 0.00 45.52 1.90
494 529 9.423061 ACATTTCATAGGAAAACAAACATTAGC 57.577 29.630 6.65 0.00 45.52 3.09
495 530 8.872845 CATTTCATAGGAAAACAAACATTAGCC 58.127 33.333 6.65 0.00 45.52 3.93
496 531 7.775053 TTCATAGGAAAACAAACATTAGCCT 57.225 32.000 0.00 0.00 0.00 4.58
497 532 8.871629 TTCATAGGAAAACAAACATTAGCCTA 57.128 30.769 0.00 0.00 0.00 3.93
498 533 8.506168 TCATAGGAAAACAAACATTAGCCTAG 57.494 34.615 0.00 0.00 31.03 3.02
499 534 8.325787 TCATAGGAAAACAAACATTAGCCTAGA 58.674 33.333 0.00 0.00 31.03 2.43
500 535 6.819397 AGGAAAACAAACATTAGCCTAGAC 57.181 37.500 0.00 0.00 0.00 2.59
501 536 6.543735 AGGAAAACAAACATTAGCCTAGACT 58.456 36.000 0.00 0.00 0.00 3.24
502 537 6.655425 AGGAAAACAAACATTAGCCTAGACTC 59.345 38.462 0.00 0.00 0.00 3.36
503 538 6.430000 GGAAAACAAACATTAGCCTAGACTCA 59.570 38.462 0.00 0.00 0.00 3.41
504 539 7.040686 GGAAAACAAACATTAGCCTAGACTCAA 60.041 37.037 0.00 0.00 0.00 3.02
505 540 8.409358 AAAACAAACATTAGCCTAGACTCAAT 57.591 30.769 0.00 0.00 0.00 2.57
506 541 6.992063 ACAAACATTAGCCTAGACTCAATG 57.008 37.500 0.00 0.00 33.75 2.82
507 542 5.882557 ACAAACATTAGCCTAGACTCAATGG 59.117 40.000 0.00 0.00 32.20 3.16
508 543 5.957771 AACATTAGCCTAGACTCAATGGA 57.042 39.130 0.00 0.00 32.20 3.41
509 544 5.957771 ACATTAGCCTAGACTCAATGGAA 57.042 39.130 0.00 0.00 32.20 3.53
510 545 6.313519 ACATTAGCCTAGACTCAATGGAAA 57.686 37.500 0.00 0.00 32.20 3.13
511 546 6.721318 ACATTAGCCTAGACTCAATGGAAAA 58.279 36.000 0.00 0.00 32.20 2.29
512 547 7.175104 ACATTAGCCTAGACTCAATGGAAAAA 58.825 34.615 0.00 0.00 32.20 1.94
531 566 5.913137 AAAAATCCTATGGTGCGAATCAA 57.087 34.783 0.00 0.00 0.00 2.57
532 567 5.913137 AAAATCCTATGGTGCGAATCAAA 57.087 34.783 0.00 0.00 0.00 2.69
533 568 5.505173 AAATCCTATGGTGCGAATCAAAG 57.495 39.130 0.00 0.00 0.00 2.77
534 569 2.917933 TCCTATGGTGCGAATCAAAGG 58.082 47.619 0.00 0.00 0.00 3.11
535 570 1.949525 CCTATGGTGCGAATCAAAGGG 59.050 52.381 0.00 0.00 0.00 3.95
536 571 1.334869 CTATGGTGCGAATCAAAGGGC 59.665 52.381 0.00 0.00 0.00 5.19
537 572 0.611618 ATGGTGCGAATCAAAGGGCA 60.612 50.000 0.00 0.00 0.00 5.36
538 573 0.611618 TGGTGCGAATCAAAGGGCAT 60.612 50.000 0.00 0.00 37.77 4.40
539 574 0.101219 GGTGCGAATCAAAGGGCATC 59.899 55.000 0.00 0.00 37.77 3.91
540 575 1.098050 GTGCGAATCAAAGGGCATCT 58.902 50.000 0.00 0.00 37.77 2.90
541 576 1.064654 GTGCGAATCAAAGGGCATCTC 59.935 52.381 0.00 0.00 37.77 2.75
542 577 1.065199 TGCGAATCAAAGGGCATCTCT 60.065 47.619 0.00 0.00 0.00 3.10
543 578 2.019984 GCGAATCAAAGGGCATCTCTT 58.980 47.619 0.00 0.00 0.00 2.85
544 579 2.424956 GCGAATCAAAGGGCATCTCTTT 59.575 45.455 0.00 0.00 35.09 2.52
545 580 3.119352 GCGAATCAAAGGGCATCTCTTTT 60.119 43.478 0.00 0.00 32.72 2.27
546 581 4.619160 GCGAATCAAAGGGCATCTCTTTTT 60.619 41.667 0.00 0.00 32.72 1.94
547 582 5.098211 CGAATCAAAGGGCATCTCTTTTTC 58.902 41.667 0.00 0.00 32.72 2.29
548 583 5.105997 CGAATCAAAGGGCATCTCTTTTTCT 60.106 40.000 0.00 0.00 32.72 2.52
549 584 6.094048 CGAATCAAAGGGCATCTCTTTTTCTA 59.906 38.462 0.00 0.00 32.72 2.10
550 585 7.201767 CGAATCAAAGGGCATCTCTTTTTCTAT 60.202 37.037 0.00 0.00 32.72 1.98
551 586 7.968014 ATCAAAGGGCATCTCTTTTTCTATT 57.032 32.000 0.00 0.00 32.72 1.73
552 587 7.396540 TCAAAGGGCATCTCTTTTTCTATTC 57.603 36.000 0.00 0.00 32.72 1.75
553 588 6.378280 TCAAAGGGCATCTCTTTTTCTATTCC 59.622 38.462 0.00 0.00 32.72 3.01
554 589 5.723860 AGGGCATCTCTTTTTCTATTCCT 57.276 39.130 0.00 0.00 0.00 3.36
555 590 6.831664 AGGGCATCTCTTTTTCTATTCCTA 57.168 37.500 0.00 0.00 0.00 2.94
556 591 7.399674 AGGGCATCTCTTTTTCTATTCCTAT 57.600 36.000 0.00 0.00 0.00 2.57
557 592 7.230027 AGGGCATCTCTTTTTCTATTCCTATG 58.770 38.462 0.00 0.00 0.00 2.23
558 593 6.072230 GGGCATCTCTTTTTCTATTCCTATGC 60.072 42.308 0.00 0.00 36.22 3.14
559 594 6.488006 GGCATCTCTTTTTCTATTCCTATGCA 59.512 38.462 0.00 0.00 38.14 3.96
560 595 7.176340 GGCATCTCTTTTTCTATTCCTATGCAT 59.824 37.037 3.79 3.79 38.14 3.96
561 596 9.224267 GCATCTCTTTTTCTATTCCTATGCATA 57.776 33.333 6.20 6.20 36.79 3.14
579 614 5.044428 GCATAGGATTTGAGATGCATGTC 57.956 43.478 16.63 16.63 43.36 3.06
580 615 4.517832 GCATAGGATTTGAGATGCATGTCA 59.482 41.667 21.70 21.70 43.36 3.58
581 616 5.183331 GCATAGGATTTGAGATGCATGTCAT 59.817 40.000 25.41 13.07 43.36 3.06
594 629 6.819397 ATGCATGTCATCTCATTTCCTATG 57.181 37.500 0.00 0.00 0.00 2.23
595 630 5.932455 TGCATGTCATCTCATTTCCTATGA 58.068 37.500 0.00 0.00 0.00 2.15
596 631 5.761726 TGCATGTCATCTCATTTCCTATGAC 59.238 40.000 7.23 7.23 45.40 3.06
597 632 5.996513 GCATGTCATCTCATTTCCTATGACT 59.003 40.000 13.59 0.19 45.40 3.41
598 633 6.485984 GCATGTCATCTCATTTCCTATGACTT 59.514 38.462 13.59 6.42 45.40 3.01
599 634 7.013083 GCATGTCATCTCATTTCCTATGACTTT 59.987 37.037 13.59 1.75 45.40 2.66
600 635 8.557864 CATGTCATCTCATTTCCTATGACTTTC 58.442 37.037 13.59 0.00 45.40 2.62
601 636 7.050377 TGTCATCTCATTTCCTATGACTTTCC 58.950 38.462 13.59 0.00 45.40 3.13
602 637 7.092712 TGTCATCTCATTTCCTATGACTTTCCT 60.093 37.037 13.59 0.00 45.40 3.36
603 638 8.424918 GTCATCTCATTTCCTATGACTTTCCTA 58.575 37.037 0.00 0.00 43.07 2.94
604 639 9.163894 TCATCTCATTTCCTATGACTTTCCTAT 57.836 33.333 0.00 0.00 0.00 2.57
605 640 9.790344 CATCTCATTTCCTATGACTTTCCTATT 57.210 33.333 0.00 0.00 0.00 1.73
607 642 8.432805 TCTCATTTCCTATGACTTTCCTATTCC 58.567 37.037 0.00 0.00 0.00 3.01
608 643 8.337118 TCATTTCCTATGACTTTCCTATTCCT 57.663 34.615 0.00 0.00 0.00 3.36
609 644 9.447279 TCATTTCCTATGACTTTCCTATTCCTA 57.553 33.333 0.00 0.00 0.00 2.94
612 647 9.447279 TTTCCTATGACTTTCCTATTCCTATGA 57.553 33.333 0.00 0.00 0.00 2.15
613 648 9.621239 TTCCTATGACTTTCCTATTCCTATGAT 57.379 33.333 0.00 0.00 0.00 2.45
614 649 9.621239 TCCTATGACTTTCCTATTCCTATGATT 57.379 33.333 0.00 0.00 0.00 2.57
618 653 8.980481 TGACTTTCCTATTCCTATGATTTTCC 57.020 34.615 0.00 0.00 0.00 3.13
619 654 8.556589 TGACTTTCCTATTCCTATGATTTTCCA 58.443 33.333 0.00 0.00 0.00 3.53
620 655 9.408648 GACTTTCCTATTCCTATGATTTTCCAA 57.591 33.333 0.00 0.00 0.00 3.53
621 656 9.942526 ACTTTCCTATTCCTATGATTTTCCAAT 57.057 29.630 0.00 0.00 0.00 3.16
623 658 8.940397 TTCCTATTCCTATGATTTTCCAATCC 57.060 34.615 0.00 0.00 38.50 3.01
624 659 8.293027 TCCTATTCCTATGATTTTCCAATCCT 57.707 34.615 0.00 0.00 38.50 3.24
625 660 9.405369 TCCTATTCCTATGATTTTCCAATCCTA 57.595 33.333 0.00 0.00 38.50 2.94
630 665 8.924511 TCCTATGATTTTCCAATCCTATGAAC 57.075 34.615 0.00 0.00 38.50 3.18
631 666 7.944554 TCCTATGATTTTCCAATCCTATGAACC 59.055 37.037 0.00 0.00 38.50 3.62
632 667 7.725397 CCTATGATTTTCCAATCCTATGAACCA 59.275 37.037 0.00 0.00 38.50 3.67
633 668 7.976414 ATGATTTTCCAATCCTATGAACCAA 57.024 32.000 0.00 0.00 38.50 3.67
634 669 7.789202 TGATTTTCCAATCCTATGAACCAAA 57.211 32.000 0.00 0.00 38.50 3.28
635 670 7.839907 TGATTTTCCAATCCTATGAACCAAAG 58.160 34.615 0.00 0.00 38.50 2.77
636 671 6.603940 TTTTCCAATCCTATGAACCAAAGG 57.396 37.500 0.00 0.00 0.00 3.11
637 672 5.528600 TTCCAATCCTATGAACCAAAGGA 57.471 39.130 0.00 0.00 43.38 3.36
638 673 5.116084 TCCAATCCTATGAACCAAAGGAG 57.884 43.478 0.00 0.00 42.53 3.69
639 674 4.079787 TCCAATCCTATGAACCAAAGGAGG 60.080 45.833 0.00 0.00 42.53 4.30
640 675 3.584733 ATCCTATGAACCAAAGGAGGC 57.415 47.619 0.00 0.00 42.53 4.70
641 676 1.564348 TCCTATGAACCAAAGGAGGCC 59.436 52.381 0.00 0.00 34.46 5.19
642 677 1.566231 CCTATGAACCAAAGGAGGCCT 59.434 52.381 3.86 3.86 33.87 5.19
643 678 2.777692 CCTATGAACCAAAGGAGGCCTA 59.222 50.000 4.42 0.00 31.13 3.93
644 679 3.202151 CCTATGAACCAAAGGAGGCCTAA 59.798 47.826 4.42 0.00 31.13 2.69
645 680 3.825908 ATGAACCAAAGGAGGCCTAAA 57.174 42.857 4.42 0.00 31.13 1.85
646 681 3.154827 TGAACCAAAGGAGGCCTAAAG 57.845 47.619 4.42 0.00 31.13 1.85
649 684 1.177401 CCAAAGGAGGCCTAAAGCAC 58.823 55.000 4.42 0.00 46.50 4.40
664 699 5.525378 CCTAAAGCACAAGGAAGCATACTAG 59.475 44.000 0.00 0.00 34.58 2.57
690 728 6.978261 AGGAGGGAATACAGTACAGTACTAA 58.022 40.000 13.12 5.27 37.23 2.24
716 759 0.463654 AGGTCGAGCACAAGCACAAA 60.464 50.000 18.15 0.00 45.49 2.83
719 762 0.029300 TCGAGCACAAGCACAAAAGC 59.971 50.000 0.00 0.00 45.49 3.51
721 764 0.936297 GAGCACAAGCACAAAAGCCG 60.936 55.000 0.00 0.00 45.49 5.52
862 911 2.162681 CCGAACTTGCTTCATTCCCTT 58.837 47.619 0.00 0.00 0.00 3.95
866 915 2.800250 ACTTGCTTCATTCCCTTCCTG 58.200 47.619 0.00 0.00 0.00 3.86
948 1005 1.819632 CCCCAAAGCGATTCCTCCG 60.820 63.158 0.00 0.00 0.00 4.63
949 1006 1.220749 CCCAAAGCGATTCCTCCGA 59.779 57.895 0.00 0.00 0.00 4.55
958 1024 1.693627 GATTCCTCCGAGTGCTCCTA 58.306 55.000 0.00 0.00 0.00 2.94
959 1025 1.338655 GATTCCTCCGAGTGCTCCTAC 59.661 57.143 0.00 0.00 0.00 3.18
986 1052 1.373246 GCCTGCACGTACGTAACCA 60.373 57.895 22.34 16.53 0.00 3.67
1854 1937 1.142748 GACGAGGCTGTGGATGGAG 59.857 63.158 0.00 0.00 0.00 3.86
1909 1992 1.018226 CAAGGAGCACGAGAAGCCTG 61.018 60.000 0.00 0.00 0.00 4.85
2022 2111 1.202417 ACCTGATCTGTACATTCCGCG 60.202 52.381 0.00 0.00 0.00 6.46
2030 2119 1.206132 TGTACATTCCGCGACAGGATT 59.794 47.619 8.23 0.00 40.48 3.01
2031 2120 2.277084 GTACATTCCGCGACAGGATTT 58.723 47.619 8.23 0.00 40.48 2.17
2032 2121 2.684001 ACATTCCGCGACAGGATTTA 57.316 45.000 8.23 0.00 40.48 1.40
2033 2122 3.194005 ACATTCCGCGACAGGATTTAT 57.806 42.857 8.23 0.00 40.48 1.40
2034 2123 3.541632 ACATTCCGCGACAGGATTTATT 58.458 40.909 8.23 0.00 40.48 1.40
2035 2124 3.945285 ACATTCCGCGACAGGATTTATTT 59.055 39.130 8.23 0.00 40.48 1.40
2036 2125 4.035208 ACATTCCGCGACAGGATTTATTTC 59.965 41.667 8.23 0.00 40.48 2.17
2077 2169 4.142381 ACTTCTTCTTGGTTTGTGTGCTTC 60.142 41.667 0.00 0.00 0.00 3.86
2116 2209 4.960938 TGGATGTACTACTGATTGATGCC 58.039 43.478 0.00 0.00 0.00 4.40
2156 2249 2.035832 TGCTTCACAGAATCACACGAGA 59.964 45.455 0.00 0.00 0.00 4.04
2157 2250 2.665537 GCTTCACAGAATCACACGAGAG 59.334 50.000 0.00 0.00 0.00 3.20
2261 2358 5.900865 TGCTTGCTGATTTGATTGATACA 57.099 34.783 0.00 0.00 0.00 2.29
2262 2359 5.886992 TGCTTGCTGATTTGATTGATACAG 58.113 37.500 0.00 0.00 0.00 2.74
2263 2360 4.738740 GCTTGCTGATTTGATTGATACAGC 59.261 41.667 0.00 0.00 46.91 4.40
2266 2363 5.496133 GCTGATTTGATTGATACAGCAGT 57.504 39.130 0.00 0.00 46.30 4.40
2267 2364 6.609237 GCTGATTTGATTGATACAGCAGTA 57.391 37.500 0.00 0.00 46.30 2.74
2268 2365 6.425504 GCTGATTTGATTGATACAGCAGTAC 58.574 40.000 0.00 0.00 46.30 2.73
2329 2433 5.393902 CAAAGGTTGCAACATCTTGTTTC 57.606 39.130 29.55 9.95 38.77 2.78
2350 2454 4.935702 TCAACTGTTTGCTCCTTTTCATG 58.064 39.130 0.00 0.00 32.17 3.07
2397 2501 3.431673 TGAGCATGTTTGTATGGGTCA 57.568 42.857 0.00 0.00 34.04 4.02
2439 2543 6.041069 CCCTTAAAACCGCAATATTTGGGATA 59.959 38.462 8.24 0.00 45.47 2.59
2440 2544 7.256154 CCCTTAAAACCGCAATATTTGGGATAT 60.256 37.037 8.24 0.00 45.47 1.63
2448 2558 4.917415 GCAATATTTGGGATATTGACACGC 59.083 41.667 18.14 3.68 41.89 5.34
2449 2559 5.507149 GCAATATTTGGGATATTGACACGCA 60.507 40.000 18.14 0.00 41.89 5.24
2450 2560 6.502652 CAATATTTGGGATATTGACACGCAA 58.497 36.000 11.47 0.00 41.89 4.85
2451 2561 4.637483 ATTTGGGATATTGACACGCAAG 57.363 40.909 0.00 0.00 40.42 4.01
2452 2562 3.342377 TTGGGATATTGACACGCAAGA 57.658 42.857 0.00 0.00 40.42 3.02
2453 2563 2.905075 TGGGATATTGACACGCAAGAG 58.095 47.619 0.00 0.00 40.42 2.85
2462 2572 2.729360 TGACACGCAAGAGTGATAAACG 59.271 45.455 10.87 0.00 42.67 3.60
2502 2613 1.166531 GGATATGTCAAGGCGGGTGC 61.167 60.000 0.00 0.00 41.71 5.01
2508 2619 2.046023 CAAGGCGGGTGCAGATGA 60.046 61.111 0.00 0.00 45.35 2.92
2571 2682 1.003331 CTTTGAGTAAACCGCGCACAA 60.003 47.619 8.75 0.00 0.00 3.33
2576 2687 1.009900 TAAACCGCGCACAAAACCG 60.010 52.632 8.75 0.00 0.00 4.44
2585 2696 0.878416 GCACAAAACCGTAGCCATCA 59.122 50.000 0.00 0.00 0.00 3.07
2755 2868 2.375174 TGAAACATGGTCCAGCCTTACT 59.625 45.455 0.00 0.00 38.35 2.24
2756 2869 2.496899 AACATGGTCCAGCCTTACTG 57.503 50.000 0.00 0.00 46.77 2.74
2772 2900 4.020573 CCTTACTGGTCTACACATTGTGGA 60.021 45.833 20.33 11.67 37.94 4.02
2784 2912 8.352201 TCTACACATTGTGGAATTCTGAAAAAG 58.648 33.333 20.33 0.00 34.87 2.27
2787 2915 8.206189 ACACATTGTGGAATTCTGAAAAAGAAT 58.794 29.630 20.33 0.00 46.00 2.40
2817 2945 8.611757 TCAGATATGATTACACACAAATTTCCG 58.388 33.333 0.00 0.00 0.00 4.30
2818 2946 7.857389 CAGATATGATTACACACAAATTTCCGG 59.143 37.037 0.00 0.00 0.00 5.14
2819 2947 4.775058 TGATTACACACAAATTTCCGGG 57.225 40.909 0.00 0.00 0.00 5.73
2820 2948 3.057174 TGATTACACACAAATTTCCGGGC 60.057 43.478 0.00 0.00 0.00 6.13
2821 2949 1.982660 TACACACAAATTTCCGGGCA 58.017 45.000 0.00 0.00 0.00 5.36
2822 2950 1.337118 ACACACAAATTTCCGGGCAT 58.663 45.000 0.00 0.00 0.00 4.40
2823 2951 1.000731 ACACACAAATTTCCGGGCATG 59.999 47.619 0.00 0.00 0.00 4.06
2824 2952 1.000731 CACACAAATTTCCGGGCATGT 59.999 47.619 0.00 0.00 0.00 3.21
2825 2953 2.230025 CACACAAATTTCCGGGCATGTA 59.770 45.455 0.00 0.00 0.00 2.29
2826 2954 3.096092 ACACAAATTTCCGGGCATGTAT 58.904 40.909 0.00 0.00 0.00 2.29
2827 2955 3.513515 ACACAAATTTCCGGGCATGTATT 59.486 39.130 0.00 0.00 0.00 1.89
2828 2956 3.864583 CACAAATTTCCGGGCATGTATTG 59.135 43.478 0.00 1.22 0.00 1.90
2829 2957 3.118811 ACAAATTTCCGGGCATGTATTGG 60.119 43.478 0.00 0.00 0.00 3.16
2830 2958 2.452600 ATTTCCGGGCATGTATTGGT 57.547 45.000 0.00 0.00 0.00 3.67
2831 2959 2.223803 TTTCCGGGCATGTATTGGTT 57.776 45.000 0.00 0.00 0.00 3.67
2832 2960 1.468985 TTCCGGGCATGTATTGGTTG 58.531 50.000 0.00 0.00 0.00 3.77
2833 2961 1.034838 TCCGGGCATGTATTGGTTGC 61.035 55.000 0.00 0.00 35.64 4.17
2834 2962 1.318886 CCGGGCATGTATTGGTTGCA 61.319 55.000 0.00 0.00 38.12 4.08
2835 2963 0.179140 CGGGCATGTATTGGTTGCAC 60.179 55.000 0.00 0.00 38.12 4.57
2836 2964 0.894141 GGGCATGTATTGGTTGCACA 59.106 50.000 0.00 0.00 39.58 4.57
2837 2965 1.135024 GGGCATGTATTGGTTGCACAG 60.135 52.381 0.00 0.00 39.58 3.66
2867 2995 2.032030 GGACGTTTATCCGATGCAATGG 60.032 50.000 0.00 0.00 0.00 3.16
2885 3013 3.281727 TGGTGGCATAAGTTCAGGATC 57.718 47.619 0.00 0.00 0.00 3.36
2886 3014 2.575735 TGGTGGCATAAGTTCAGGATCA 59.424 45.455 0.00 0.00 0.00 2.92
2887 3015 3.209410 GGTGGCATAAGTTCAGGATCAG 58.791 50.000 0.00 0.00 0.00 2.90
2888 3016 3.209410 GTGGCATAAGTTCAGGATCAGG 58.791 50.000 0.00 0.00 0.00 3.86
2889 3017 3.114606 TGGCATAAGTTCAGGATCAGGA 58.885 45.455 0.00 0.00 0.00 3.86
2890 3018 3.718434 TGGCATAAGTTCAGGATCAGGAT 59.282 43.478 0.00 0.00 0.00 3.24
2891 3019 4.907269 TGGCATAAGTTCAGGATCAGGATA 59.093 41.667 0.00 0.00 0.00 2.59
2892 3020 5.012458 TGGCATAAGTTCAGGATCAGGATAG 59.988 44.000 0.00 0.00 0.00 2.08
2893 3021 5.012561 GGCATAAGTTCAGGATCAGGATAGT 59.987 44.000 0.00 0.00 0.00 2.12
2894 3022 6.211584 GGCATAAGTTCAGGATCAGGATAGTA 59.788 42.308 0.00 0.00 0.00 1.82
2895 3023 7.319646 GCATAAGTTCAGGATCAGGATAGTAG 58.680 42.308 0.00 0.00 0.00 2.57
2896 3024 7.039363 GCATAAGTTCAGGATCAGGATAGTAGT 60.039 40.741 0.00 0.00 0.00 2.73
2897 3025 6.969993 AAGTTCAGGATCAGGATAGTAGTC 57.030 41.667 0.00 0.00 0.00 2.59
2898 3026 6.274322 AGTTCAGGATCAGGATAGTAGTCT 57.726 41.667 0.00 0.00 0.00 3.24
2899 3027 7.395525 AGTTCAGGATCAGGATAGTAGTCTA 57.604 40.000 0.00 0.00 0.00 2.59
2900 3028 7.458397 AGTTCAGGATCAGGATAGTAGTCTAG 58.542 42.308 0.00 0.00 0.00 2.43
2901 3029 7.073215 AGTTCAGGATCAGGATAGTAGTCTAGT 59.927 40.741 0.00 0.00 0.00 2.57
2902 3030 7.011499 TCAGGATCAGGATAGTAGTCTAGTC 57.989 44.000 0.00 0.00 0.00 2.59
2903 3031 6.013206 TCAGGATCAGGATAGTAGTCTAGTCC 60.013 46.154 0.00 0.00 0.00 3.85
2904 3032 6.012858 CAGGATCAGGATAGTAGTCTAGTCCT 60.013 46.154 0.00 3.58 36.04 3.85
2905 3033 6.214819 AGGATCAGGATAGTAGTCTAGTCCTC 59.785 46.154 0.00 0.00 34.80 3.71
2906 3034 6.214819 GGATCAGGATAGTAGTCTAGTCCTCT 59.785 46.154 0.00 0.00 34.80 3.69
2907 3035 6.428083 TCAGGATAGTAGTCTAGTCCTCTG 57.572 45.833 5.73 5.57 34.80 3.35
2908 3036 6.144625 TCAGGATAGTAGTCTAGTCCTCTGA 58.855 44.000 5.73 7.25 34.80 3.27
2909 3037 6.790461 TCAGGATAGTAGTCTAGTCCTCTGAT 59.210 42.308 5.73 0.00 34.80 2.90
2910 3038 7.038587 TCAGGATAGTAGTCTAGTCCTCTGATC 60.039 44.444 5.73 0.00 34.80 2.92
2911 3039 6.790461 AGGATAGTAGTCTAGTCCTCTGATCA 59.210 42.308 0.00 0.00 33.31 2.92
2912 3040 7.293771 AGGATAGTAGTCTAGTCCTCTGATCAA 59.706 40.741 0.00 0.00 33.31 2.57
2913 3041 7.606456 GGATAGTAGTCTAGTCCTCTGATCAAG 59.394 44.444 0.00 0.00 0.00 3.02
2914 3042 6.569127 AGTAGTCTAGTCCTCTGATCAAGA 57.431 41.667 0.00 0.00 0.00 3.02
2915 3043 7.149202 AGTAGTCTAGTCCTCTGATCAAGAT 57.851 40.000 0.00 0.00 33.29 2.40
2916 3044 6.998074 AGTAGTCTAGTCCTCTGATCAAGATG 59.002 42.308 0.00 0.00 33.29 2.90
2917 3045 5.139727 AGTCTAGTCCTCTGATCAAGATGG 58.860 45.833 0.00 0.00 33.29 3.51
2918 3046 3.894427 TCTAGTCCTCTGATCAAGATGGC 59.106 47.826 0.00 0.00 33.29 4.40
2919 3047 2.761809 AGTCCTCTGATCAAGATGGCT 58.238 47.619 0.00 0.00 31.34 4.75
2920 3048 3.113824 AGTCCTCTGATCAAGATGGCTT 58.886 45.455 0.00 0.00 32.14 4.35
2921 3049 3.522750 AGTCCTCTGATCAAGATGGCTTT 59.477 43.478 0.00 0.00 32.14 3.51
2922 3050 3.626670 GTCCTCTGATCAAGATGGCTTTG 59.373 47.826 0.00 0.00 33.29 2.77
2923 3051 2.358267 CCTCTGATCAAGATGGCTTTGC 59.642 50.000 0.00 0.00 33.29 3.68
2924 3052 3.280295 CTCTGATCAAGATGGCTTTGCT 58.720 45.455 0.00 0.00 33.29 3.91
2925 3053 4.449131 CTCTGATCAAGATGGCTTTGCTA 58.551 43.478 0.00 0.00 33.29 3.49
2926 3054 4.847198 TCTGATCAAGATGGCTTTGCTAA 58.153 39.130 0.00 0.00 30.14 3.09
2927 3055 5.443283 TCTGATCAAGATGGCTTTGCTAAT 58.557 37.500 0.00 0.00 30.14 1.73
2928 3056 5.889853 TCTGATCAAGATGGCTTTGCTAATT 59.110 36.000 0.00 0.00 30.14 1.40
2929 3057 6.379133 TCTGATCAAGATGGCTTTGCTAATTT 59.621 34.615 0.00 0.00 30.14 1.82
2930 3058 7.557358 TCTGATCAAGATGGCTTTGCTAATTTA 59.443 33.333 0.00 0.00 30.14 1.40
2931 3059 8.241497 TGATCAAGATGGCTTTGCTAATTTAT 57.759 30.769 0.00 0.00 30.14 1.40
2932 3060 8.698210 TGATCAAGATGGCTTTGCTAATTTATT 58.302 29.630 0.00 0.00 30.14 1.40
2933 3061 8.882415 ATCAAGATGGCTTTGCTAATTTATTG 57.118 30.769 0.00 0.00 30.14 1.90
2934 3062 8.065473 TCAAGATGGCTTTGCTAATTTATTGA 57.935 30.769 0.00 0.00 30.14 2.57
2935 3063 7.975616 TCAAGATGGCTTTGCTAATTTATTGAC 59.024 33.333 0.00 0.00 30.14 3.18
2936 3064 6.809869 AGATGGCTTTGCTAATTTATTGACC 58.190 36.000 0.00 0.00 0.00 4.02
2937 3065 6.608808 AGATGGCTTTGCTAATTTATTGACCT 59.391 34.615 0.00 0.00 0.00 3.85
2938 3066 7.779798 AGATGGCTTTGCTAATTTATTGACCTA 59.220 33.333 0.00 0.00 0.00 3.08
2939 3067 7.095695 TGGCTTTGCTAATTTATTGACCTAC 57.904 36.000 0.00 0.00 0.00 3.18
2940 3068 6.889722 TGGCTTTGCTAATTTATTGACCTACT 59.110 34.615 0.00 0.00 0.00 2.57
2941 3069 7.148086 TGGCTTTGCTAATTTATTGACCTACTG 60.148 37.037 0.00 0.00 0.00 2.74
2942 3070 7.148069 GGCTTTGCTAATTTATTGACCTACTGT 60.148 37.037 0.00 0.00 0.00 3.55
2943 3071 8.244113 GCTTTGCTAATTTATTGACCTACTGTT 58.756 33.333 0.00 0.00 0.00 3.16
2945 3073 9.906660 TTTGCTAATTTATTGACCTACTGTTTG 57.093 29.630 0.00 0.00 0.00 2.93
2946 3074 7.535139 TGCTAATTTATTGACCTACTGTTTGC 58.465 34.615 0.00 0.00 0.00 3.68
2947 3075 6.972901 GCTAATTTATTGACCTACTGTTTGCC 59.027 38.462 0.00 0.00 0.00 4.52
2948 3076 7.148069 GCTAATTTATTGACCTACTGTTTGCCT 60.148 37.037 0.00 0.00 0.00 4.75
2949 3077 7.539034 AATTTATTGACCTACTGTTTGCCTT 57.461 32.000 0.00 0.00 0.00 4.35
2950 3078 6.569179 TTTATTGACCTACTGTTTGCCTTC 57.431 37.500 0.00 0.00 0.00 3.46
2951 3079 3.569194 TTGACCTACTGTTTGCCTTCA 57.431 42.857 0.00 0.00 0.00 3.02
2952 3080 3.788227 TGACCTACTGTTTGCCTTCAT 57.212 42.857 0.00 0.00 0.00 2.57
2953 3081 4.098914 TGACCTACTGTTTGCCTTCATT 57.901 40.909 0.00 0.00 0.00 2.57
2954 3082 3.820467 TGACCTACTGTTTGCCTTCATTG 59.180 43.478 0.00 0.00 0.00 2.82
2955 3083 3.821033 GACCTACTGTTTGCCTTCATTGT 59.179 43.478 0.00 0.00 0.00 2.71
2956 3084 3.569701 ACCTACTGTTTGCCTTCATTGTG 59.430 43.478 0.00 0.00 0.00 3.33
2957 3085 3.057315 CCTACTGTTTGCCTTCATTGTGG 60.057 47.826 0.00 0.00 0.00 4.17
2963 3091 3.746900 GCCTTCATTGTGGCCATTC 57.253 52.632 9.72 0.00 43.11 2.67
2964 3092 0.896923 GCCTTCATTGTGGCCATTCA 59.103 50.000 9.72 0.00 43.11 2.57
2965 3093 1.134907 GCCTTCATTGTGGCCATTCAG 60.135 52.381 9.72 0.00 43.11 3.02
2966 3094 1.134907 CCTTCATTGTGGCCATTCAGC 60.135 52.381 9.72 0.00 0.00 4.26
2967 3095 1.822990 CTTCATTGTGGCCATTCAGCT 59.177 47.619 9.72 0.00 0.00 4.24
2968 3096 1.179152 TCATTGTGGCCATTCAGCTG 58.821 50.000 9.72 7.63 0.00 4.24
2969 3097 0.459585 CATTGTGGCCATTCAGCTGC 60.460 55.000 9.72 0.00 0.00 5.25
2970 3098 0.901114 ATTGTGGCCATTCAGCTGCA 60.901 50.000 9.72 0.00 0.00 4.41
2971 3099 0.901114 TTGTGGCCATTCAGCTGCAT 60.901 50.000 9.72 0.00 0.00 3.96
2972 3100 0.034283 TGTGGCCATTCAGCTGCATA 60.034 50.000 9.72 0.00 0.00 3.14
2973 3101 1.105457 GTGGCCATTCAGCTGCATAA 58.895 50.000 9.72 0.00 0.00 1.90
2974 3102 1.105457 TGGCCATTCAGCTGCATAAC 58.895 50.000 9.47 0.00 0.00 1.89
2975 3103 1.105457 GGCCATTCAGCTGCATAACA 58.895 50.000 9.47 0.00 0.00 2.41
2976 3104 1.477700 GGCCATTCAGCTGCATAACAA 59.522 47.619 9.47 0.00 0.00 2.83
2977 3105 2.101917 GGCCATTCAGCTGCATAACAAT 59.898 45.455 9.47 0.00 0.00 2.71
2978 3106 3.120792 GCCATTCAGCTGCATAACAATG 58.879 45.455 9.47 12.25 0.00 2.82
2990 3118 4.293415 GCATAACAATGCTATTCACCTGC 58.707 43.478 3.15 0.00 43.79 4.85
2991 3119 4.794003 GCATAACAATGCTATTCACCTGCC 60.794 45.833 3.15 0.00 43.79 4.85
2992 3120 2.814805 ACAATGCTATTCACCTGCCT 57.185 45.000 0.00 0.00 0.00 4.75
2993 3121 2.372264 ACAATGCTATTCACCTGCCTG 58.628 47.619 0.00 0.00 0.00 4.85
2994 3122 1.066605 CAATGCTATTCACCTGCCTGC 59.933 52.381 0.00 0.00 0.00 4.85
2995 3123 0.816825 ATGCTATTCACCTGCCTGCG 60.817 55.000 0.00 0.00 0.00 5.18
2996 3124 1.153369 GCTATTCACCTGCCTGCGA 60.153 57.895 0.00 0.00 0.00 5.10
2997 3125 0.744414 GCTATTCACCTGCCTGCGAA 60.744 55.000 0.00 0.00 0.00 4.70
2998 3126 1.737838 CTATTCACCTGCCTGCGAAA 58.262 50.000 0.00 0.00 0.00 3.46
2999 3127 1.667724 CTATTCACCTGCCTGCGAAAG 59.332 52.381 0.00 0.00 0.00 2.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 1.005394 AAACGGTCGGCACCTGTAG 60.005 57.895 0.00 0.00 41.17 2.74
20 21 3.411351 CGAAACGGTCGGCACCTG 61.411 66.667 3.07 2.07 46.45 4.00
80 81 3.685139 AACGCATCTTCTTCTTGAGGA 57.315 42.857 0.00 0.00 35.22 3.71
109 110 4.421515 CAGTCAGGCAGGGCAGGG 62.422 72.222 0.00 0.00 0.00 4.45
111 112 1.980784 ATAGCAGTCAGGCAGGGCAG 61.981 60.000 0.00 0.00 35.83 4.85
112 113 1.997311 ATAGCAGTCAGGCAGGGCA 60.997 57.895 0.00 0.00 35.83 5.36
113 114 1.525535 CATAGCAGTCAGGCAGGGC 60.526 63.158 0.00 0.00 35.83 5.19
151 158 2.910977 AGAGTGGGTAAACGGAAGGAAT 59.089 45.455 0.00 0.00 0.00 3.01
169 176 3.922171 AAGGAGGCCTATGAAACAGAG 57.078 47.619 4.42 0.00 31.13 3.35
170 177 4.567747 GGAAAAGGAGGCCTATGAAACAGA 60.568 45.833 4.42 0.00 31.13 3.41
171 178 3.696548 GGAAAAGGAGGCCTATGAAACAG 59.303 47.826 4.42 0.00 31.13 3.16
177 184 2.420058 AACGGAAAAGGAGGCCTATG 57.580 50.000 4.42 0.00 31.13 2.23
320 355 7.019656 AGGAGGCCTATAGTAGTAGTAGTTC 57.980 44.000 4.42 0.00 28.47 3.01
321 356 7.405228 AAGGAGGCCTATAGTAGTAGTAGTT 57.595 40.000 4.42 0.00 31.13 2.24
325 360 5.103172 ACCAAAGGAGGCCTATAGTAGTAGT 60.103 44.000 4.42 0.00 31.13 2.73
335 370 1.354368 CTCCAAACCAAAGGAGGCCTA 59.646 52.381 4.42 0.00 46.11 3.93
341 376 7.398904 CCTATAAAATTCCTCCAAACCAAAGGA 59.601 37.037 0.00 0.00 37.42 3.36
342 377 7.398904 TCCTATAAAATTCCTCCAAACCAAAGG 59.601 37.037 0.00 0.00 0.00 3.11
343 378 8.361169 TCCTATAAAATTCCTCCAAACCAAAG 57.639 34.615 0.00 0.00 0.00 2.77
344 379 8.909423 ATCCTATAAAATTCCTCCAAACCAAA 57.091 30.769 0.00 0.00 0.00 3.28
345 380 8.909423 AATCCTATAAAATTCCTCCAAACCAA 57.091 30.769 0.00 0.00 0.00 3.67
346 381 8.909423 AAATCCTATAAAATTCCTCCAAACCA 57.091 30.769 0.00 0.00 0.00 3.67
347 382 9.817809 GAAAATCCTATAAAATTCCTCCAAACC 57.182 33.333 0.00 0.00 0.00 3.27
386 421 9.965902 AGCTCTGAAAGAATTTTTCCTATAGAA 57.034 29.630 0.00 0.00 46.34 2.10
387 422 9.606631 GAGCTCTGAAAGAATTTTTCCTATAGA 57.393 33.333 6.43 6.05 46.34 1.98
388 423 9.612066 AGAGCTCTGAAAGAATTTTTCCTATAG 57.388 33.333 17.42 0.00 46.34 1.31
389 424 9.965902 AAGAGCTCTGAAAGAATTTTTCCTATA 57.034 29.630 19.06 0.00 46.34 1.31
390 425 8.876303 AAGAGCTCTGAAAGAATTTTTCCTAT 57.124 30.769 19.06 0.00 46.34 2.57
391 426 8.571336 CAAAGAGCTCTGAAAGAATTTTTCCTA 58.429 33.333 19.06 0.80 46.34 2.94
392 427 7.432059 CAAAGAGCTCTGAAAGAATTTTTCCT 58.568 34.615 19.06 0.00 46.34 3.36
393 428 6.644181 CCAAAGAGCTCTGAAAGAATTTTTCC 59.356 38.462 19.06 0.00 46.34 3.13
394 429 7.205992 ACCAAAGAGCTCTGAAAGAATTTTTC 58.794 34.615 19.06 6.30 46.34 2.29
395 430 7.117285 ACCAAAGAGCTCTGAAAGAATTTTT 57.883 32.000 19.06 0.00 46.34 1.94
396 431 6.721704 ACCAAAGAGCTCTGAAAGAATTTT 57.278 33.333 19.06 0.81 46.34 1.82
397 432 6.721704 AACCAAAGAGCTCTGAAAGAATTT 57.278 33.333 19.06 1.63 46.34 1.82
398 433 6.097412 ACAAACCAAAGAGCTCTGAAAGAATT 59.903 34.615 19.06 2.47 46.34 2.17
399 434 5.595952 ACAAACCAAAGAGCTCTGAAAGAAT 59.404 36.000 19.06 0.00 46.34 2.40
400 435 4.949856 ACAAACCAAAGAGCTCTGAAAGAA 59.050 37.500 19.06 0.00 46.34 2.52
401 436 4.526970 ACAAACCAAAGAGCTCTGAAAGA 58.473 39.130 19.06 0.00 43.69 2.52
402 437 4.907879 ACAAACCAAAGAGCTCTGAAAG 57.092 40.909 19.06 9.30 0.00 2.62
403 438 4.821805 CCTACAAACCAAAGAGCTCTGAAA 59.178 41.667 19.06 0.00 0.00 2.69
404 439 4.102524 TCCTACAAACCAAAGAGCTCTGAA 59.897 41.667 19.06 0.00 0.00 3.02
405 440 3.646162 TCCTACAAACCAAAGAGCTCTGA 59.354 43.478 19.06 2.19 0.00 3.27
406 441 4.008074 TCCTACAAACCAAAGAGCTCTG 57.992 45.455 19.06 7.57 0.00 3.35
407 442 4.706842 TTCCTACAAACCAAAGAGCTCT 57.293 40.909 11.45 11.45 0.00 4.09
408 443 5.003804 TCATTCCTACAAACCAAAGAGCTC 58.996 41.667 5.27 5.27 0.00 4.09
409 444 4.985538 TCATTCCTACAAACCAAAGAGCT 58.014 39.130 0.00 0.00 0.00 4.09
410 445 5.705609 TTCATTCCTACAAACCAAAGAGC 57.294 39.130 0.00 0.00 0.00 4.09
411 446 7.177392 AGGATTTCATTCCTACAAACCAAAGAG 59.823 37.037 0.00 0.00 44.50 2.85
412 447 7.010160 AGGATTTCATTCCTACAAACCAAAGA 58.990 34.615 0.00 0.00 44.50 2.52
413 448 7.232118 AGGATTTCATTCCTACAAACCAAAG 57.768 36.000 0.00 0.00 44.50 2.77
426 461 9.799106 TTTCTCCATAGGAATAGGATTTCATTC 57.201 33.333 0.00 0.00 0.00 2.67
429 464 9.799106 GAATTTCTCCATAGGAATAGGATTTCA 57.201 33.333 0.00 0.00 28.82 2.69
433 468 8.610369 GGAAGAATTTCTCCATAGGAATAGGAT 58.390 37.037 0.00 0.00 28.82 3.24
434 469 7.796637 AGGAAGAATTTCTCCATAGGAATAGGA 59.203 37.037 13.77 0.00 28.82 2.94
435 470 7.983363 AGGAAGAATTTCTCCATAGGAATAGG 58.017 38.462 13.77 0.00 28.82 2.57
438 473 8.610369 GGATAGGAAGAATTTCTCCATAGGAAT 58.390 37.037 13.77 0.00 31.74 3.01
439 474 7.796637 AGGATAGGAAGAATTTCTCCATAGGAA 59.203 37.037 13.77 0.00 31.06 3.36
440 475 7.316841 AGGATAGGAAGAATTTCTCCATAGGA 58.683 38.462 13.77 0.00 31.06 2.94
441 476 7.310983 GGAGGATAGGAAGAATTTCTCCATAGG 60.311 44.444 13.77 0.00 39.30 2.57
442 477 7.236432 TGGAGGATAGGAAGAATTTCTCCATAG 59.764 40.741 13.77 0.00 42.91 2.23
443 478 7.082316 TGGAGGATAGGAAGAATTTCTCCATA 58.918 38.462 13.77 0.00 42.91 2.74
444 479 5.913534 TGGAGGATAGGAAGAATTTCTCCAT 59.086 40.000 13.77 0.00 42.91 3.41
445 480 5.131142 GTGGAGGATAGGAAGAATTTCTCCA 59.869 44.000 13.77 0.00 44.77 3.86
446 481 5.131142 TGTGGAGGATAGGAAGAATTTCTCC 59.869 44.000 0.00 3.47 39.77 3.71
447 482 6.240549 TGTGGAGGATAGGAAGAATTTCTC 57.759 41.667 0.00 0.00 33.68 2.87
448 483 6.838401 ATGTGGAGGATAGGAAGAATTTCT 57.162 37.500 0.00 0.00 33.68 2.52
449 484 7.557719 TGAAATGTGGAGGATAGGAAGAATTTC 59.442 37.037 0.00 0.00 33.19 2.17
450 485 7.413446 TGAAATGTGGAGGATAGGAAGAATTT 58.587 34.615 0.00 0.00 0.00 1.82
451 486 6.973642 TGAAATGTGGAGGATAGGAAGAATT 58.026 36.000 0.00 0.00 0.00 2.17
452 487 6.581388 TGAAATGTGGAGGATAGGAAGAAT 57.419 37.500 0.00 0.00 0.00 2.40
453 488 6.581388 ATGAAATGTGGAGGATAGGAAGAA 57.419 37.500 0.00 0.00 0.00 2.52
454 489 6.270927 CCTATGAAATGTGGAGGATAGGAAGA 59.729 42.308 0.00 0.00 36.16 2.87
455 490 6.270927 TCCTATGAAATGTGGAGGATAGGAAG 59.729 42.308 0.00 0.00 38.86 3.46
456 491 6.150332 TCCTATGAAATGTGGAGGATAGGAA 58.850 40.000 0.00 0.00 38.86 3.36
457 492 5.726560 TCCTATGAAATGTGGAGGATAGGA 58.273 41.667 0.00 0.00 39.29 2.94
458 493 6.439636 TTCCTATGAAATGTGGAGGATAGG 57.560 41.667 0.00 0.00 36.22 2.57
459 494 7.775093 TGTTTTCCTATGAAATGTGGAGGATAG 59.225 37.037 0.00 0.00 40.08 2.08
460 495 7.638444 TGTTTTCCTATGAAATGTGGAGGATA 58.362 34.615 0.00 0.00 40.08 2.59
461 496 6.493166 TGTTTTCCTATGAAATGTGGAGGAT 58.507 36.000 0.00 0.00 40.08 3.24
462 497 5.886609 TGTTTTCCTATGAAATGTGGAGGA 58.113 37.500 0.00 0.00 40.08 3.71
463 498 6.588719 TTGTTTTCCTATGAAATGTGGAGG 57.411 37.500 0.00 0.00 40.08 4.30
464 499 7.432869 TGTTTGTTTTCCTATGAAATGTGGAG 58.567 34.615 0.00 0.00 40.08 3.86
465 500 7.353414 TGTTTGTTTTCCTATGAAATGTGGA 57.647 32.000 0.00 0.00 40.08 4.02
466 501 8.606040 AATGTTTGTTTTCCTATGAAATGTGG 57.394 30.769 0.00 0.00 40.08 4.17
468 503 9.423061 GCTAATGTTTGTTTTCCTATGAAATGT 57.577 29.630 0.00 0.00 40.08 2.71
469 504 8.872845 GGCTAATGTTTGTTTTCCTATGAAATG 58.127 33.333 0.00 0.00 40.08 2.32
470 505 8.815912 AGGCTAATGTTTGTTTTCCTATGAAAT 58.184 29.630 0.00 0.00 40.08 2.17
471 506 8.189119 AGGCTAATGTTTGTTTTCCTATGAAA 57.811 30.769 0.00 0.00 38.69 2.69
472 507 7.775053 AGGCTAATGTTTGTTTTCCTATGAA 57.225 32.000 0.00 0.00 0.00 2.57
473 508 8.325787 TCTAGGCTAATGTTTGTTTTCCTATGA 58.674 33.333 0.00 0.00 0.00 2.15
474 509 8.398665 GTCTAGGCTAATGTTTGTTTTCCTATG 58.601 37.037 0.00 0.00 0.00 2.23
475 510 8.329502 AGTCTAGGCTAATGTTTGTTTTCCTAT 58.670 33.333 0.00 0.00 0.00 2.57
476 511 7.686434 AGTCTAGGCTAATGTTTGTTTTCCTA 58.314 34.615 0.00 0.00 0.00 2.94
477 512 6.543735 AGTCTAGGCTAATGTTTGTTTTCCT 58.456 36.000 0.00 0.00 0.00 3.36
478 513 6.430000 TGAGTCTAGGCTAATGTTTGTTTTCC 59.570 38.462 0.00 0.00 0.00 3.13
479 514 7.435068 TGAGTCTAGGCTAATGTTTGTTTTC 57.565 36.000 0.00 0.00 0.00 2.29
480 515 7.817418 TTGAGTCTAGGCTAATGTTTGTTTT 57.183 32.000 0.00 0.00 0.00 2.43
481 516 7.094205 CCATTGAGTCTAGGCTAATGTTTGTTT 60.094 37.037 17.62 0.00 0.00 2.83
482 517 6.375455 CCATTGAGTCTAGGCTAATGTTTGTT 59.625 38.462 17.62 0.00 0.00 2.83
483 518 5.882557 CCATTGAGTCTAGGCTAATGTTTGT 59.117 40.000 17.62 0.00 0.00 2.83
484 519 6.115446 TCCATTGAGTCTAGGCTAATGTTTG 58.885 40.000 17.62 8.79 0.00 2.93
485 520 6.313519 TCCATTGAGTCTAGGCTAATGTTT 57.686 37.500 17.62 0.00 0.00 2.83
486 521 5.957771 TCCATTGAGTCTAGGCTAATGTT 57.042 39.130 17.62 0.00 0.00 2.71
487 522 5.957771 TTCCATTGAGTCTAGGCTAATGT 57.042 39.130 17.62 0.00 0.00 2.71
488 523 7.630242 TTTTTCCATTGAGTCTAGGCTAATG 57.370 36.000 0.00 8.01 0.00 1.90
509 544 5.913137 TTGATTCGCACCATAGGATTTTT 57.087 34.783 0.00 0.00 0.00 1.94
510 545 5.163519 CCTTTGATTCGCACCATAGGATTTT 60.164 40.000 0.00 0.00 34.69 1.82
511 546 4.339247 CCTTTGATTCGCACCATAGGATTT 59.661 41.667 0.00 0.00 34.69 2.17
512 547 3.885297 CCTTTGATTCGCACCATAGGATT 59.115 43.478 0.00 0.00 34.69 3.01
513 548 3.480470 CCTTTGATTCGCACCATAGGAT 58.520 45.455 0.00 0.00 34.69 3.24
514 549 2.421388 CCCTTTGATTCGCACCATAGGA 60.421 50.000 0.00 0.00 34.69 2.94
515 550 1.949525 CCCTTTGATTCGCACCATAGG 59.050 52.381 0.00 0.00 33.22 2.57
516 551 1.334869 GCCCTTTGATTCGCACCATAG 59.665 52.381 0.00 0.00 0.00 2.23
517 552 1.340502 TGCCCTTTGATTCGCACCATA 60.341 47.619 0.00 0.00 0.00 2.74
518 553 0.611618 TGCCCTTTGATTCGCACCAT 60.612 50.000 0.00 0.00 0.00 3.55
519 554 0.611618 ATGCCCTTTGATTCGCACCA 60.612 50.000 0.00 0.00 33.31 4.17
520 555 0.101219 GATGCCCTTTGATTCGCACC 59.899 55.000 0.00 0.00 33.31 5.01
521 556 1.064654 GAGATGCCCTTTGATTCGCAC 59.935 52.381 0.00 0.00 33.31 5.34
522 557 1.065199 AGAGATGCCCTTTGATTCGCA 60.065 47.619 0.00 0.00 35.35 5.10
523 558 1.673168 AGAGATGCCCTTTGATTCGC 58.327 50.000 0.00 0.00 0.00 4.70
524 559 4.708726 AAAAGAGATGCCCTTTGATTCG 57.291 40.909 0.00 0.00 34.42 3.34
525 560 6.278172 AGAAAAAGAGATGCCCTTTGATTC 57.722 37.500 0.00 0.00 34.42 2.52
526 561 7.968014 ATAGAAAAAGAGATGCCCTTTGATT 57.032 32.000 0.00 0.00 34.42 2.57
527 562 7.069208 GGAATAGAAAAAGAGATGCCCTTTGAT 59.931 37.037 0.00 0.00 34.42 2.57
528 563 6.378280 GGAATAGAAAAAGAGATGCCCTTTGA 59.622 38.462 0.00 0.00 34.42 2.69
529 564 6.379417 AGGAATAGAAAAAGAGATGCCCTTTG 59.621 38.462 0.00 0.00 34.42 2.77
530 565 6.497640 AGGAATAGAAAAAGAGATGCCCTTT 58.502 36.000 0.00 0.00 35.55 3.11
531 566 6.084749 AGGAATAGAAAAAGAGATGCCCTT 57.915 37.500 0.00 0.00 0.00 3.95
532 567 5.723860 AGGAATAGAAAAAGAGATGCCCT 57.276 39.130 0.00 0.00 0.00 5.19
533 568 6.072230 GCATAGGAATAGAAAAAGAGATGCCC 60.072 42.308 0.00 0.00 31.89 5.36
534 569 6.488006 TGCATAGGAATAGAAAAAGAGATGCC 59.512 38.462 0.00 0.00 36.09 4.40
535 570 7.502120 TGCATAGGAATAGAAAAAGAGATGC 57.498 36.000 0.00 0.00 37.16 3.91
557 592 4.517832 TGACATGCATCTCAAATCCTATGC 59.482 41.667 1.73 0.00 43.92 3.14
558 593 6.819397 ATGACATGCATCTCAAATCCTATG 57.181 37.500 8.81 0.00 28.85 2.23
571 606 6.430308 GTCATAGGAAATGAGATGACATGCAT 59.570 38.462 8.58 0.00 44.91 3.96
572 607 5.761726 GTCATAGGAAATGAGATGACATGCA 59.238 40.000 8.58 0.00 44.91 3.96
573 608 5.996513 AGTCATAGGAAATGAGATGACATGC 59.003 40.000 14.37 0.00 46.94 4.06
574 609 8.447924 AAAGTCATAGGAAATGAGATGACATG 57.552 34.615 14.37 0.00 46.94 3.21
575 610 7.718753 GGAAAGTCATAGGAAATGAGATGACAT 59.281 37.037 14.37 1.96 46.94 3.06
576 611 7.050377 GGAAAGTCATAGGAAATGAGATGACA 58.950 38.462 14.37 0.00 46.94 3.58
577 612 7.278875 AGGAAAGTCATAGGAAATGAGATGAC 58.721 38.462 5.86 5.86 45.57 3.06
578 613 7.443302 AGGAAAGTCATAGGAAATGAGATGA 57.557 36.000 0.00 0.00 0.00 2.92
579 614 9.790344 AATAGGAAAGTCATAGGAAATGAGATG 57.210 33.333 0.00 0.00 0.00 2.90
581 616 8.432805 GGAATAGGAAAGTCATAGGAAATGAGA 58.567 37.037 0.00 0.00 0.00 3.27
582 617 8.435982 AGGAATAGGAAAGTCATAGGAAATGAG 58.564 37.037 0.00 0.00 0.00 2.90
583 618 8.337118 AGGAATAGGAAAGTCATAGGAAATGA 57.663 34.615 0.00 0.00 0.00 2.57
586 621 9.447279 TCATAGGAATAGGAAAGTCATAGGAAA 57.553 33.333 0.00 0.00 0.00 3.13
587 622 9.621239 ATCATAGGAATAGGAAAGTCATAGGAA 57.379 33.333 0.00 0.00 0.00 3.36
588 623 9.621239 AATCATAGGAATAGGAAAGTCATAGGA 57.379 33.333 0.00 0.00 0.00 2.94
592 627 9.579932 GGAAAATCATAGGAATAGGAAAGTCAT 57.420 33.333 0.00 0.00 0.00 3.06
593 628 8.556589 TGGAAAATCATAGGAATAGGAAAGTCA 58.443 33.333 0.00 0.00 0.00 3.41
594 629 8.980481 TGGAAAATCATAGGAATAGGAAAGTC 57.020 34.615 0.00 0.00 0.00 3.01
595 630 9.942526 ATTGGAAAATCATAGGAATAGGAAAGT 57.057 29.630 0.00 0.00 0.00 2.66
597 632 9.367160 GGATTGGAAAATCATAGGAATAGGAAA 57.633 33.333 1.28 0.00 0.00 3.13
598 633 8.736675 AGGATTGGAAAATCATAGGAATAGGAA 58.263 33.333 1.28 0.00 0.00 3.36
599 634 8.293027 AGGATTGGAAAATCATAGGAATAGGA 57.707 34.615 1.28 0.00 0.00 2.94
604 639 9.354673 GTTCATAGGATTGGAAAATCATAGGAA 57.645 33.333 13.10 13.10 41.07 3.36
605 640 7.944554 GGTTCATAGGATTGGAAAATCATAGGA 59.055 37.037 4.08 4.08 35.40 2.94
606 641 7.725397 TGGTTCATAGGATTGGAAAATCATAGG 59.275 37.037 1.28 0.58 30.31 2.57
607 642 8.696043 TGGTTCATAGGATTGGAAAATCATAG 57.304 34.615 1.28 0.00 30.31 2.23
608 643 9.486123 TTTGGTTCATAGGATTGGAAAATCATA 57.514 29.630 1.28 0.00 31.19 2.15
609 644 7.976414 TTGGTTCATAGGATTGGAAAATCAT 57.024 32.000 1.28 0.00 0.00 2.45
610 645 7.093377 CCTTTGGTTCATAGGATTGGAAAATCA 60.093 37.037 0.00 0.00 35.14 2.57
611 646 7.124147 TCCTTTGGTTCATAGGATTGGAAAATC 59.876 37.037 3.54 0.00 36.84 2.17
612 647 6.959366 TCCTTTGGTTCATAGGATTGGAAAAT 59.041 34.615 3.54 0.00 36.84 1.82
613 648 6.318913 TCCTTTGGTTCATAGGATTGGAAAA 58.681 36.000 3.54 0.00 36.84 2.29
614 649 5.898120 TCCTTTGGTTCATAGGATTGGAAA 58.102 37.500 3.54 0.00 36.84 3.13
615 650 5.509498 CTCCTTTGGTTCATAGGATTGGAA 58.491 41.667 7.38 0.00 39.94 3.53
616 651 4.079787 CCTCCTTTGGTTCATAGGATTGGA 60.080 45.833 7.38 0.00 39.94 3.53
617 652 4.210331 CCTCCTTTGGTTCATAGGATTGG 58.790 47.826 7.38 3.85 39.94 3.16
618 653 3.633986 GCCTCCTTTGGTTCATAGGATTG 59.366 47.826 7.38 4.49 39.94 2.67
619 654 3.373110 GGCCTCCTTTGGTTCATAGGATT 60.373 47.826 0.00 0.00 39.94 3.01
620 655 2.175715 GGCCTCCTTTGGTTCATAGGAT 59.824 50.000 0.00 0.00 39.94 3.24
621 656 1.564348 GGCCTCCTTTGGTTCATAGGA 59.436 52.381 0.00 6.86 38.81 2.94
622 657 1.566231 AGGCCTCCTTTGGTTCATAGG 59.434 52.381 0.00 0.00 34.61 2.57
623 658 4.503714 TTAGGCCTCCTTTGGTTCATAG 57.496 45.455 9.68 0.00 34.61 2.23
624 659 4.855340 CTTTAGGCCTCCTTTGGTTCATA 58.145 43.478 9.68 0.00 34.61 2.15
625 660 3.701664 CTTTAGGCCTCCTTTGGTTCAT 58.298 45.455 9.68 0.00 34.61 2.57
626 661 2.817839 GCTTTAGGCCTCCTTTGGTTCA 60.818 50.000 9.68 0.00 34.61 3.18
627 662 1.819288 GCTTTAGGCCTCCTTTGGTTC 59.181 52.381 9.68 0.00 34.61 3.62
628 663 1.146982 TGCTTTAGGCCTCCTTTGGTT 59.853 47.619 9.68 0.00 40.92 3.67
629 664 0.777446 TGCTTTAGGCCTCCTTTGGT 59.223 50.000 9.68 0.00 40.92 3.67
630 665 1.177401 GTGCTTTAGGCCTCCTTTGG 58.823 55.000 9.68 0.00 40.92 3.28
631 666 1.909700 TGTGCTTTAGGCCTCCTTTG 58.090 50.000 9.68 0.00 40.92 2.77
632 667 2.519013 CTTGTGCTTTAGGCCTCCTTT 58.481 47.619 9.68 0.00 40.92 3.11
633 668 1.272147 CCTTGTGCTTTAGGCCTCCTT 60.272 52.381 9.68 0.00 40.92 3.36
634 669 0.329596 CCTTGTGCTTTAGGCCTCCT 59.670 55.000 9.68 0.00 40.92 3.69
635 670 0.328258 TCCTTGTGCTTTAGGCCTCC 59.672 55.000 9.68 0.00 40.92 4.30
636 671 2.087646 CTTCCTTGTGCTTTAGGCCTC 58.912 52.381 9.68 0.00 40.92 4.70
637 672 1.888391 GCTTCCTTGTGCTTTAGGCCT 60.888 52.381 11.78 11.78 40.92 5.19
638 673 0.528017 GCTTCCTTGTGCTTTAGGCC 59.472 55.000 0.00 0.00 40.92 5.19
639 674 1.247567 TGCTTCCTTGTGCTTTAGGC 58.752 50.000 0.00 0.00 42.22 3.93
640 675 4.265073 AGTATGCTTCCTTGTGCTTTAGG 58.735 43.478 0.00 0.00 0.00 2.69
641 676 6.109359 ACTAGTATGCTTCCTTGTGCTTTAG 58.891 40.000 0.00 0.00 0.00 1.85
642 677 6.049955 ACTAGTATGCTTCCTTGTGCTTTA 57.950 37.500 0.00 0.00 0.00 1.85
643 678 4.911390 ACTAGTATGCTTCCTTGTGCTTT 58.089 39.130 0.00 0.00 0.00 3.51
644 679 4.559862 ACTAGTATGCTTCCTTGTGCTT 57.440 40.909 0.00 0.00 0.00 3.91
645 680 4.100189 CCTACTAGTATGCTTCCTTGTGCT 59.900 45.833 2.33 0.00 0.00 4.40
646 681 4.099573 TCCTACTAGTATGCTTCCTTGTGC 59.900 45.833 2.33 0.00 0.00 4.57
649 684 4.282195 CCCTCCTACTAGTATGCTTCCTTG 59.718 50.000 2.33 0.00 0.00 3.61
664 699 6.363882 AGTACTGTACTGTATTCCCTCCTAC 58.636 44.000 19.09 2.24 37.69 3.18
690 728 2.675317 GCTTGTGCTCGACCTCAACTAT 60.675 50.000 0.00 0.00 36.03 2.12
716 759 1.073199 CCTCCAACTCCAACGGCTT 59.927 57.895 0.00 0.00 0.00 4.35
719 762 1.774894 TTCCCCTCCAACTCCAACGG 61.775 60.000 0.00 0.00 0.00 4.44
721 764 1.617322 GTTTCCCCTCCAACTCCAAC 58.383 55.000 0.00 0.00 0.00 3.77
948 1005 2.184579 GGCACGGTAGGAGCACTC 59.815 66.667 0.00 0.00 0.00 3.51
991 1057 0.842030 AGGTCCTTCATGCCCAGTCA 60.842 55.000 0.00 0.00 0.00 3.41
1182 1253 1.153997 GTCGACGAGCAGGTCCTTC 60.154 63.158 0.00 0.00 33.30 3.46
1566 1646 1.166531 ACTCCAAGAAGCGCGCTTTT 61.167 50.000 42.93 36.07 36.26 2.27
1959 2048 1.615116 CCTTGGATGAGCAGGCAGAAA 60.615 52.381 0.00 0.00 0.00 2.52
2022 2111 8.286191 AGATTGGTGAAGAAATAAATCCTGTC 57.714 34.615 0.00 0.00 0.00 3.51
2030 2119 8.846211 AGTCGAAAAAGATTGGTGAAGAAATAA 58.154 29.630 0.00 0.00 0.00 1.40
2031 2120 8.391075 AGTCGAAAAAGATTGGTGAAGAAATA 57.609 30.769 0.00 0.00 0.00 1.40
2032 2121 7.277174 AGTCGAAAAAGATTGGTGAAGAAAT 57.723 32.000 0.00 0.00 0.00 2.17
2033 2122 6.693315 AGTCGAAAAAGATTGGTGAAGAAA 57.307 33.333 0.00 0.00 0.00 2.52
2034 2123 6.542370 AGAAGTCGAAAAAGATTGGTGAAGAA 59.458 34.615 0.00 0.00 0.00 2.52
2035 2124 6.055588 AGAAGTCGAAAAAGATTGGTGAAGA 58.944 36.000 0.00 0.00 0.00 2.87
2036 2125 6.305693 AGAAGTCGAAAAAGATTGGTGAAG 57.694 37.500 0.00 0.00 0.00 3.02
2077 2169 8.840321 AGTACATCCATCCTAAATTTCATTTCG 58.160 33.333 0.00 0.00 33.82 3.46
2116 2209 2.539547 GCATCGGATCAATTCACAACCG 60.540 50.000 0.00 0.00 41.39 4.44
2157 2250 1.394917 CTACCATTCACAGCTTCACGC 59.605 52.381 0.00 0.00 39.57 5.34
2264 2361 1.618837 ACGCATTCACAGTCAGGTACT 59.381 47.619 0.00 0.00 39.81 2.73
2265 2362 2.080286 ACGCATTCACAGTCAGGTAC 57.920 50.000 0.00 0.00 0.00 3.34
2266 2363 2.224185 ACAACGCATTCACAGTCAGGTA 60.224 45.455 0.00 0.00 0.00 3.08
2267 2364 1.229428 CAACGCATTCACAGTCAGGT 58.771 50.000 0.00 0.00 0.00 4.00
2268 2365 1.069703 CACAACGCATTCACAGTCAGG 60.070 52.381 0.00 0.00 0.00 3.86
2282 2379 6.907212 GCTGTATATTTCTGAAATCCACAACG 59.093 38.462 18.22 12.72 32.38 4.10
2322 2426 4.376340 AGGAGCAAACAGTTGAAACAAG 57.624 40.909 0.00 0.00 36.83 3.16
2329 2433 4.053295 CCATGAAAAGGAGCAAACAGTTG 58.947 43.478 0.00 0.00 37.83 3.16
2333 2437 2.037901 TGCCATGAAAAGGAGCAAACA 58.962 42.857 0.00 0.00 0.00 2.83
2350 2454 7.893045 ACAAAATGTTTTTGTGGCTATGTGCC 61.893 38.462 15.43 4.80 45.44 5.01
2366 2470 6.740411 ACAAACATGCTCAAACAAAATGTT 57.260 29.167 0.00 0.00 43.41 2.71
2367 2471 7.041916 CCATACAAACATGCTCAAACAAAATGT 60.042 33.333 0.00 0.00 32.99 2.71
2397 2501 3.091633 AGGGTGCAAATCAGCTTACAT 57.908 42.857 0.00 0.00 42.57 2.29
2439 2543 4.143115 CGTTTATCACTCTTGCGTGTCAAT 60.143 41.667 0.00 0.00 36.33 2.57
2440 2544 3.183574 CGTTTATCACTCTTGCGTGTCAA 59.816 43.478 0.00 0.00 36.33 3.18
2448 2558 5.597813 AACTTGCTCGTTTATCACTCTTG 57.402 39.130 0.00 0.00 0.00 3.02
2449 2559 7.152645 TCTTAACTTGCTCGTTTATCACTCTT 58.847 34.615 0.00 0.00 0.00 2.85
2450 2560 6.688578 TCTTAACTTGCTCGTTTATCACTCT 58.311 36.000 0.00 0.00 0.00 3.24
2451 2561 6.946229 TCTTAACTTGCTCGTTTATCACTC 57.054 37.500 0.00 0.00 0.00 3.51
2452 2562 7.724305 TTTCTTAACTTGCTCGTTTATCACT 57.276 32.000 0.00 0.00 0.00 3.41
2453 2563 8.068380 AGTTTTCTTAACTTGCTCGTTTATCAC 58.932 33.333 0.00 0.00 0.00 3.06
2495 2606 0.106708 TTATCCTCATCTGCACCCGC 59.893 55.000 0.00 0.00 39.24 6.13
2502 2613 9.617975 GAGAAAAAGTGTTTTTATCCTCATCTG 57.382 33.333 7.85 0.00 42.17 2.90
2571 2682 0.390735 GTCGGTGATGGCTACGGTTT 60.391 55.000 0.00 0.00 0.00 3.27
2576 2687 1.585521 CGACGTCGGTGATGGCTAC 60.586 63.158 29.70 0.00 35.37 3.58
2585 2696 1.443872 GCTCACAATCGACGTCGGT 60.444 57.895 35.05 28.47 40.29 4.69
2659 2772 2.438021 TGGAATAATTGAGAGGGACCCG 59.562 50.000 4.40 0.00 0.00 5.28
2723 2836 5.163322 TGGACCATGTTTCATTTGCTTCTTT 60.163 36.000 0.00 0.00 0.00 2.52
2755 2868 5.003160 CAGAATTCCACAATGTGTAGACCA 58.997 41.667 12.79 0.00 0.00 4.02
2756 2869 5.245531 TCAGAATTCCACAATGTGTAGACC 58.754 41.667 12.79 0.00 0.00 3.85
2759 2872 8.352201 TCTTTTTCAGAATTCCACAATGTGTAG 58.648 33.333 12.79 0.00 0.00 2.74
2761 2874 7.111247 TCTTTTTCAGAATTCCACAATGTGT 57.889 32.000 12.79 0.00 0.00 3.72
2791 2919 8.611757 CGGAAATTTGTGTGTAATCATATCTGA 58.388 33.333 0.00 0.00 35.41 3.27
2792 2920 7.857389 CCGGAAATTTGTGTGTAATCATATCTG 59.143 37.037 0.00 0.00 0.00 2.90
2793 2921 7.013274 CCCGGAAATTTGTGTGTAATCATATCT 59.987 37.037 0.73 0.00 0.00 1.98
2794 2922 7.138736 CCCGGAAATTTGTGTGTAATCATATC 58.861 38.462 0.73 0.00 0.00 1.63
2796 2924 5.163602 GCCCGGAAATTTGTGTGTAATCATA 60.164 40.000 0.73 0.00 0.00 2.15
2799 2927 3.057174 TGCCCGGAAATTTGTGTGTAATC 60.057 43.478 0.73 0.00 0.00 1.75
2800 2928 2.894126 TGCCCGGAAATTTGTGTGTAAT 59.106 40.909 0.73 0.00 0.00 1.89
2802 2930 1.982660 TGCCCGGAAATTTGTGTGTA 58.017 45.000 0.73 0.00 0.00 2.90
2803 2931 1.000731 CATGCCCGGAAATTTGTGTGT 59.999 47.619 0.73 0.00 0.00 3.72
2804 2932 1.000731 ACATGCCCGGAAATTTGTGTG 59.999 47.619 0.73 0.00 0.00 3.82
2805 2933 1.337118 ACATGCCCGGAAATTTGTGT 58.663 45.000 0.73 0.00 0.00 3.72
2807 2935 3.118811 CCAATACATGCCCGGAAATTTGT 60.119 43.478 0.73 1.64 0.00 2.83
2808 2936 3.118811 ACCAATACATGCCCGGAAATTTG 60.119 43.478 0.73 0.00 0.00 2.32
2809 2937 3.103742 ACCAATACATGCCCGGAAATTT 58.896 40.909 0.73 0.00 0.00 1.82
2810 2938 2.745968 ACCAATACATGCCCGGAAATT 58.254 42.857 0.73 0.00 0.00 1.82
2811 2939 2.430332 CAACCAATACATGCCCGGAAAT 59.570 45.455 0.73 0.00 0.00 2.17
2812 2940 1.821753 CAACCAATACATGCCCGGAAA 59.178 47.619 0.73 0.00 0.00 3.13
2813 2941 1.468985 CAACCAATACATGCCCGGAA 58.531 50.000 0.73 0.00 0.00 4.30
2814 2942 1.034838 GCAACCAATACATGCCCGGA 61.035 55.000 0.73 0.00 34.03 5.14
2815 2943 1.318886 TGCAACCAATACATGCCCGG 61.319 55.000 0.00 0.00 39.31 5.73
2816 2944 0.179140 GTGCAACCAATACATGCCCG 60.179 55.000 0.00 0.00 39.31 6.13
2817 2945 0.894141 TGTGCAACCAATACATGCCC 59.106 50.000 0.00 0.00 39.31 5.36
2818 2946 1.818060 TCTGTGCAACCAATACATGCC 59.182 47.619 0.00 0.00 39.31 4.40
2819 2947 2.749076 TCTCTGTGCAACCAATACATGC 59.251 45.455 0.00 0.00 40.45 4.06
2820 2948 4.005650 AGTCTCTGTGCAACCAATACATG 58.994 43.478 0.00 0.00 34.36 3.21
2821 2949 4.292186 AGTCTCTGTGCAACCAATACAT 57.708 40.909 0.00 0.00 34.36 2.29
2822 2950 3.769739 AGTCTCTGTGCAACCAATACA 57.230 42.857 0.00 0.00 34.36 2.29
2823 2951 3.189287 CCAAGTCTCTGTGCAACCAATAC 59.811 47.826 0.00 0.00 34.36 1.89
2824 2952 3.411446 CCAAGTCTCTGTGCAACCAATA 58.589 45.455 0.00 0.00 34.36 1.90
2825 2953 2.233271 CCAAGTCTCTGTGCAACCAAT 58.767 47.619 0.00 0.00 34.36 3.16
2826 2954 1.679139 CCAAGTCTCTGTGCAACCAA 58.321 50.000 0.00 0.00 34.36 3.67
2827 2955 0.179020 CCCAAGTCTCTGTGCAACCA 60.179 55.000 0.00 0.00 34.36 3.67
2828 2956 0.890996 CCCCAAGTCTCTGTGCAACC 60.891 60.000 0.00 0.00 34.36 3.77
2829 2957 0.108585 TCCCCAAGTCTCTGTGCAAC 59.891 55.000 0.00 0.00 37.35 4.17
2830 2958 0.108585 GTCCCCAAGTCTCTGTGCAA 59.891 55.000 0.00 0.00 0.00 4.08
2831 2959 1.754745 GTCCCCAAGTCTCTGTGCA 59.245 57.895 0.00 0.00 0.00 4.57
2832 2960 1.374758 CGTCCCCAAGTCTCTGTGC 60.375 63.158 0.00 0.00 0.00 4.57
2833 2961 0.393077 AACGTCCCCAAGTCTCTGTG 59.607 55.000 0.00 0.00 0.00 3.66
2834 2962 1.129058 AAACGTCCCCAAGTCTCTGT 58.871 50.000 0.00 0.00 0.00 3.41
2835 2963 3.522553 GATAAACGTCCCCAAGTCTCTG 58.477 50.000 0.00 0.00 0.00 3.35
2836 2964 2.500504 GGATAAACGTCCCCAAGTCTCT 59.499 50.000 0.00 0.00 31.82 3.10
2837 2965 2.737679 CGGATAAACGTCCCCAAGTCTC 60.738 54.545 0.00 0.00 34.67 3.36
2867 2995 3.118261 TCCTGATCCTGAACTTATGCCAC 60.118 47.826 0.00 0.00 0.00 5.01
2876 3004 7.228590 ACTAGACTACTATCCTGATCCTGAAC 58.771 42.308 0.00 0.00 0.00 3.18
2885 3013 6.428083 TCAGAGGACTAGACTACTATCCTG 57.572 45.833 9.11 0.00 37.08 3.86
2886 3014 6.790461 TGATCAGAGGACTAGACTACTATCCT 59.210 42.308 0.00 0.00 38.29 3.24
2887 3015 7.011499 TGATCAGAGGACTAGACTACTATCC 57.989 44.000 0.00 0.00 32.09 2.59
2888 3016 8.372459 TCTTGATCAGAGGACTAGACTACTATC 58.628 40.741 0.00 0.00 0.00 2.08
2889 3017 8.270137 TCTTGATCAGAGGACTAGACTACTAT 57.730 38.462 0.00 0.00 0.00 2.12
2890 3018 7.678207 TCTTGATCAGAGGACTAGACTACTA 57.322 40.000 0.00 0.00 0.00 1.82
2891 3019 6.569127 TCTTGATCAGAGGACTAGACTACT 57.431 41.667 0.00 0.00 0.00 2.57
2892 3020 6.206634 CCATCTTGATCAGAGGACTAGACTAC 59.793 46.154 0.00 0.00 35.07 2.73
2893 3021 6.303054 CCATCTTGATCAGAGGACTAGACTA 58.697 44.000 0.00 0.00 35.07 2.59
2894 3022 5.139727 CCATCTTGATCAGAGGACTAGACT 58.860 45.833 0.00 0.00 35.07 3.24
2895 3023 4.261994 GCCATCTTGATCAGAGGACTAGAC 60.262 50.000 0.00 0.00 35.07 2.59
2896 3024 3.894427 GCCATCTTGATCAGAGGACTAGA 59.106 47.826 0.00 0.00 35.07 2.43
2897 3025 3.896888 AGCCATCTTGATCAGAGGACTAG 59.103 47.826 0.00 0.00 35.07 2.57
2898 3026 3.921104 AGCCATCTTGATCAGAGGACTA 58.079 45.455 0.00 0.00 35.07 2.59
2899 3027 2.761809 AGCCATCTTGATCAGAGGACT 58.238 47.619 0.00 0.00 35.07 3.85
2900 3028 3.557228 AAGCCATCTTGATCAGAGGAC 57.443 47.619 0.00 0.00 35.07 3.85
2901 3029 3.882444 CAAAGCCATCTTGATCAGAGGA 58.118 45.455 0.00 0.00 35.07 3.71
2902 3030 2.358267 GCAAAGCCATCTTGATCAGAGG 59.642 50.000 0.00 0.00 33.87 3.69
2903 3031 3.280295 AGCAAAGCCATCTTGATCAGAG 58.720 45.455 0.00 0.00 33.87 3.35
2904 3032 3.361281 AGCAAAGCCATCTTGATCAGA 57.639 42.857 0.00 0.00 35.33 3.27
2905 3033 5.769484 ATTAGCAAAGCCATCTTGATCAG 57.231 39.130 0.00 0.00 31.78 2.90
2906 3034 6.534475 AAATTAGCAAAGCCATCTTGATCA 57.466 33.333 0.00 0.00 31.78 2.92
2907 3035 8.975439 CAATAAATTAGCAAAGCCATCTTGATC 58.025 33.333 0.00 0.00 31.78 2.92
2908 3036 8.698210 TCAATAAATTAGCAAAGCCATCTTGAT 58.302 29.630 0.00 0.00 31.78 2.57
2909 3037 7.975616 GTCAATAAATTAGCAAAGCCATCTTGA 59.024 33.333 0.00 0.00 31.78 3.02
2910 3038 7.223387 GGTCAATAAATTAGCAAAGCCATCTTG 59.777 37.037 0.00 0.00 31.78 3.02
2911 3039 7.124750 AGGTCAATAAATTAGCAAAGCCATCTT 59.875 33.333 0.00 0.00 0.00 2.40
2912 3040 6.608808 AGGTCAATAAATTAGCAAAGCCATCT 59.391 34.615 0.00 0.00 0.00 2.90
2913 3041 6.809869 AGGTCAATAAATTAGCAAAGCCATC 58.190 36.000 0.00 0.00 0.00 3.51
2914 3042 6.796785 AGGTCAATAAATTAGCAAAGCCAT 57.203 33.333 0.00 0.00 0.00 4.40
2915 3043 6.889722 AGTAGGTCAATAAATTAGCAAAGCCA 59.110 34.615 0.00 0.00 0.00 4.75
2916 3044 7.148069 ACAGTAGGTCAATAAATTAGCAAAGCC 60.148 37.037 0.00 0.00 0.00 4.35
2917 3045 7.762382 ACAGTAGGTCAATAAATTAGCAAAGC 58.238 34.615 0.00 0.00 0.00 3.51
2919 3047 9.906660 CAAACAGTAGGTCAATAAATTAGCAAA 57.093 29.630 0.00 0.00 0.00 3.68
2920 3048 8.026607 GCAAACAGTAGGTCAATAAATTAGCAA 58.973 33.333 0.00 0.00 0.00 3.91
2921 3049 7.362574 GGCAAACAGTAGGTCAATAAATTAGCA 60.363 37.037 0.00 0.00 0.00 3.49
2922 3050 6.972901 GGCAAACAGTAGGTCAATAAATTAGC 59.027 38.462 0.00 0.00 0.00 3.09
2923 3051 8.281212 AGGCAAACAGTAGGTCAATAAATTAG 57.719 34.615 0.00 0.00 0.00 1.73
2924 3052 8.644374 AAGGCAAACAGTAGGTCAATAAATTA 57.356 30.769 0.00 0.00 0.00 1.40
2925 3053 7.232534 TGAAGGCAAACAGTAGGTCAATAAATT 59.767 33.333 0.00 0.00 0.00 1.82
2926 3054 6.719370 TGAAGGCAAACAGTAGGTCAATAAAT 59.281 34.615 0.00 0.00 0.00 1.40
2927 3055 6.065374 TGAAGGCAAACAGTAGGTCAATAAA 58.935 36.000 0.00 0.00 0.00 1.40
2928 3056 5.626142 TGAAGGCAAACAGTAGGTCAATAA 58.374 37.500 0.00 0.00 0.00 1.40
2929 3057 5.235850 TGAAGGCAAACAGTAGGTCAATA 57.764 39.130 0.00 0.00 0.00 1.90
2930 3058 4.098914 TGAAGGCAAACAGTAGGTCAAT 57.901 40.909 0.00 0.00 0.00 2.57
2931 3059 3.569194 TGAAGGCAAACAGTAGGTCAA 57.431 42.857 0.00 0.00 0.00 3.18
2932 3060 3.788227 ATGAAGGCAAACAGTAGGTCA 57.212 42.857 0.00 0.00 0.00 4.02
2933 3061 3.821033 ACAATGAAGGCAAACAGTAGGTC 59.179 43.478 0.00 0.00 0.00 3.85
2934 3062 3.569701 CACAATGAAGGCAAACAGTAGGT 59.430 43.478 0.00 0.00 0.00 3.08
2935 3063 3.057315 CCACAATGAAGGCAAACAGTAGG 60.057 47.826 0.00 0.00 0.00 3.18
2936 3064 4.164822 CCACAATGAAGGCAAACAGTAG 57.835 45.455 0.00 0.00 0.00 2.57
2946 3074 1.134907 GCTGAATGGCCACAATGAAGG 60.135 52.381 8.16 0.00 0.00 3.46
2947 3075 1.822990 AGCTGAATGGCCACAATGAAG 59.177 47.619 8.16 0.99 0.00 3.02
2948 3076 1.546923 CAGCTGAATGGCCACAATGAA 59.453 47.619 8.16 0.00 0.00 2.57
2949 3077 1.179152 CAGCTGAATGGCCACAATGA 58.821 50.000 8.16 0.00 0.00 2.57
2950 3078 0.459585 GCAGCTGAATGGCCACAATG 60.460 55.000 20.43 5.73 0.00 2.82
2951 3079 0.901114 TGCAGCTGAATGGCCACAAT 60.901 50.000 20.43 0.00 0.00 2.71
2952 3080 0.901114 ATGCAGCTGAATGGCCACAA 60.901 50.000 20.43 0.00 0.00 3.33
2953 3081 0.034283 TATGCAGCTGAATGGCCACA 60.034 50.000 20.43 0.36 0.00 4.17
2954 3082 1.105457 TTATGCAGCTGAATGGCCAC 58.895 50.000 20.43 0.00 0.00 5.01
2955 3083 1.105457 GTTATGCAGCTGAATGGCCA 58.895 50.000 20.43 8.56 0.00 5.36
2956 3084 1.105457 TGTTATGCAGCTGAATGGCC 58.895 50.000 20.43 5.51 0.00 5.36
2957 3085 2.945447 TTGTTATGCAGCTGAATGGC 57.055 45.000 20.43 10.52 0.00 4.40
2969 3097 4.581824 AGGCAGGTGAATAGCATTGTTATG 59.418 41.667 0.00 0.00 34.76 1.90
2970 3098 4.581824 CAGGCAGGTGAATAGCATTGTTAT 59.418 41.667 0.00 0.00 0.00 1.89
2971 3099 3.947196 CAGGCAGGTGAATAGCATTGTTA 59.053 43.478 0.00 0.00 0.00 2.41
2972 3100 2.756760 CAGGCAGGTGAATAGCATTGTT 59.243 45.455 0.00 0.00 0.00 2.83
2973 3101 2.372264 CAGGCAGGTGAATAGCATTGT 58.628 47.619 0.00 0.00 0.00 2.71
2974 3102 1.066605 GCAGGCAGGTGAATAGCATTG 59.933 52.381 0.00 0.00 0.00 2.82
2975 3103 1.396653 GCAGGCAGGTGAATAGCATT 58.603 50.000 0.00 0.00 0.00 3.56
2976 3104 0.816825 CGCAGGCAGGTGAATAGCAT 60.817 55.000 0.00 0.00 0.00 3.79
2977 3105 1.450134 CGCAGGCAGGTGAATAGCA 60.450 57.895 0.00 0.00 0.00 3.49
2978 3106 0.744414 TTCGCAGGCAGGTGAATAGC 60.744 55.000 1.69 0.00 32.71 2.97
2979 3107 1.667724 CTTTCGCAGGCAGGTGAATAG 59.332 52.381 6.10 4.17 37.16 1.73
2980 3108 1.678728 CCTTTCGCAGGCAGGTGAATA 60.679 52.381 6.10 0.00 37.16 1.75
2981 3109 0.962356 CCTTTCGCAGGCAGGTGAAT 60.962 55.000 6.10 0.00 37.16 2.57
2982 3110 1.600636 CCTTTCGCAGGCAGGTGAA 60.601 57.895 1.69 1.69 35.13 3.18
2983 3111 2.032528 CCTTTCGCAGGCAGGTGA 59.967 61.111 0.00 0.00 35.13 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.