Multiple sequence alignment - TraesCS2B01G284900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G284900 chr2B 100.000 3014 0 0 1 3014 392609837 392612850 0.000000e+00 5566.0
1 TraesCS2B01G284900 chr2D 92.801 1653 70 13 418 2034 324036181 324037820 0.000000e+00 2348.0
2 TraesCS2B01G284900 chr2D 96.605 324 10 1 1 324 324034218 324034540 1.230000e-148 536.0
3 TraesCS2B01G284900 chr2D 83.276 586 45 24 2050 2613 324037877 324038431 9.710000e-135 490.0
4 TraesCS2B01G284900 chr7D 84.663 163 21 4 2855 3014 532897639 532897478 3.110000e-35 159.0
5 TraesCS2B01G284900 chr7D 88.000 75 9 0 1184 1258 37234900 37234826 4.140000e-14 89.8
6 TraesCS2B01G284900 chr5D 81.481 162 23 5 2855 3009 285841043 285841204 3.150000e-25 126.0
7 TraesCS2B01G284900 chr1B 80.420 143 20 6 1184 1325 389980343 389980478 5.320000e-18 102.0
8 TraesCS2B01G284900 chr1D 79.720 143 21 6 1184 1325 288546049 288546184 2.470000e-16 97.1
9 TraesCS2B01G284900 chrUn 89.474 76 6 2 1184 1258 90726744 90726670 8.900000e-16 95.3
10 TraesCS2B01G284900 chrUn 89.474 76 6 2 1184 1258 90939289 90939215 8.900000e-16 95.3
11 TraesCS2B01G284900 chrUn 89.474 76 6 2 1184 1258 401026614 401026540 8.900000e-16 95.3
12 TraesCS2B01G284900 chrUn 95.000 40 2 0 424 463 91000443 91000482 2.510000e-06 63.9
13 TraesCS2B01G284900 chrUn 95.000 40 2 0 424 463 91056850 91056889 2.510000e-06 63.9
14 TraesCS2B01G284900 chrUn 89.796 49 5 0 424 472 135321403 135321355 2.510000e-06 63.9
15 TraesCS2B01G284900 chrUn 89.796 49 5 0 424 472 135354557 135354509 2.510000e-06 63.9
16 TraesCS2B01G284900 chrUn 89.796 49 5 0 424 472 239422009 239421961 2.510000e-06 63.9
17 TraesCS2B01G284900 chrUn 89.796 49 5 0 424 472 245489044 245488996 2.510000e-06 63.9
18 TraesCS2B01G284900 chrUn 95.000 40 2 0 424 463 367976914 367976953 2.510000e-06 63.9
19 TraesCS2B01G284900 chr7A 89.474 76 6 2 1184 1258 36630015 36629941 8.900000e-16 95.3
20 TraesCS2B01G284900 chr4A 88.158 76 7 2 1184 1258 689137581 689137507 4.140000e-14 89.8
21 TraesCS2B01G284900 chr5A 85.714 77 10 1 2851 2926 309021282 309021358 2.490000e-11 80.5
22 TraesCS2B01G284900 chr2A 97.500 40 1 0 421 460 715268204 715268165 5.390000e-08 69.4
23 TraesCS2B01G284900 chr2A 93.333 45 2 1 418 462 621188574 621188617 6.970000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G284900 chr2B 392609837 392612850 3013 False 5566.000000 5566 100.000 1 3014 1 chr2B.!!$F1 3013
1 TraesCS2B01G284900 chr2D 324034218 324038431 4213 False 1124.666667 2348 90.894 1 2613 3 chr2D.!!$F1 2612

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
860 2501 0.096281 TTACACTGCGCGCTAATTGC 59.904 50.0 33.29 0.55 38.57 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2712 4417 0.034059 AGGAGCACCTGTCTTTCACG 59.966 55.0 0.22 0.0 45.92 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 5.367302 ACATTTCAATTGGTCCCAAAACTG 58.633 37.500 5.42 1.92 39.55 3.16
35 36 4.399004 TTCAATTGGTCCCAAAACTGTG 57.601 40.909 5.42 0.00 39.55 3.66
39 40 1.039068 TGGTCCCAAAACTGTGCATG 58.961 50.000 0.00 0.00 0.00 4.06
40 41 0.319813 GGTCCCAAAACTGTGCATGC 60.320 55.000 11.82 11.82 0.00 4.06
49 50 2.736144 ACTGTGCATGCAATTTCCAG 57.264 45.000 24.58 25.12 0.00 3.86
131 132 0.797249 CAATCTCACCGTCGTCGACC 60.797 60.000 19.29 2.53 39.71 4.79
324 325 4.213482 ACTCGTTTCTTTTCTGCCATGTAC 59.787 41.667 0.00 0.00 0.00 2.90
326 327 4.451096 TCGTTTCTTTTCTGCCATGTACTC 59.549 41.667 0.00 0.00 0.00 2.59
327 328 4.378459 CGTTTCTTTTCTGCCATGTACTCC 60.378 45.833 0.00 0.00 0.00 3.85
329 330 5.755409 TTCTTTTCTGCCATGTACTCCTA 57.245 39.130 0.00 0.00 0.00 2.94
330 331 5.957771 TCTTTTCTGCCATGTACTCCTAT 57.042 39.130 0.00 0.00 0.00 2.57
331 332 5.674525 TCTTTTCTGCCATGTACTCCTATG 58.325 41.667 0.00 0.00 0.00 2.23
332 333 5.425217 TCTTTTCTGCCATGTACTCCTATGA 59.575 40.000 0.00 0.00 0.00 2.15
334 335 3.234353 TCTGCCATGTACTCCTATGAGG 58.766 50.000 0.00 0.00 43.29 3.86
335 336 2.301296 CTGCCATGTACTCCTATGAGGG 59.699 54.545 0.00 0.00 43.29 4.30
336 337 1.002544 GCCATGTACTCCTATGAGGGC 59.997 57.143 0.00 0.00 43.29 5.19
337 338 2.614259 CCATGTACTCCTATGAGGGCT 58.386 52.381 0.00 0.00 43.29 5.19
338 339 2.564947 CCATGTACTCCTATGAGGGCTC 59.435 54.545 0.00 0.00 43.29 4.70
339 340 3.505386 CATGTACTCCTATGAGGGCTCT 58.495 50.000 0.00 0.00 43.29 4.09
340 341 3.231207 TGTACTCCTATGAGGGCTCTC 57.769 52.381 6.66 6.66 43.29 3.20
341 342 2.158445 TGTACTCCTATGAGGGCTCTCC 60.158 54.545 12.09 0.00 43.29 3.71
352 353 3.882131 GGCTCTCCCAATGCAGTAA 57.118 52.632 0.00 0.00 0.00 2.24
353 354 2.128771 GGCTCTCCCAATGCAGTAAA 57.871 50.000 0.00 0.00 0.00 2.01
354 355 2.446435 GGCTCTCCCAATGCAGTAAAA 58.554 47.619 0.00 0.00 0.00 1.52
355 356 2.825532 GGCTCTCCCAATGCAGTAAAAA 59.174 45.455 0.00 0.00 0.00 1.94
386 387 8.240883 ACTTGCAGTAAAGTTTAAGATAGACG 57.759 34.615 0.00 0.00 37.05 4.18
387 388 7.331193 ACTTGCAGTAAAGTTTAAGATAGACGG 59.669 37.037 0.00 0.00 37.05 4.79
388 389 6.927416 TGCAGTAAAGTTTAAGATAGACGGA 58.073 36.000 0.00 0.00 0.00 4.69
389 390 6.810182 TGCAGTAAAGTTTAAGATAGACGGAC 59.190 38.462 0.00 0.00 0.00 4.79
390 391 6.255237 GCAGTAAAGTTTAAGATAGACGGACC 59.745 42.308 0.00 0.00 0.00 4.46
391 392 7.318141 CAGTAAAGTTTAAGATAGACGGACCA 58.682 38.462 0.00 0.00 0.00 4.02
392 393 7.980099 CAGTAAAGTTTAAGATAGACGGACCAT 59.020 37.037 0.00 0.00 0.00 3.55
393 394 7.980099 AGTAAAGTTTAAGATAGACGGACCATG 59.020 37.037 0.00 0.00 0.00 3.66
394 395 5.934402 AGTTTAAGATAGACGGACCATGT 57.066 39.130 0.00 0.00 0.00 3.21
401 402 9.675464 TTAAGATAGACGGACCATGTTAAAATT 57.325 29.630 0.00 0.00 0.00 1.82
406 407 6.235664 AGACGGACCATGTTAAAATTAGTGT 58.764 36.000 0.00 0.00 0.00 3.55
408 409 7.879160 AGACGGACCATGTTAAAATTAGTGTAA 59.121 33.333 0.00 0.00 0.00 2.41
454 2059 4.153296 CACACGTGTGGCACTTATCATTTA 59.847 41.667 35.65 0.00 42.10 1.40
490 2104 7.997773 TGGCGTAGATGAGTATTACTCTTAT 57.002 36.000 21.35 15.71 45.27 1.73
523 2138 8.262227 TGTGAAAAGTTAATATAGACGGACCAT 58.738 33.333 0.00 0.00 0.00 3.55
524 2139 8.548721 GTGAAAAGTTAATATAGACGGACCATG 58.451 37.037 0.00 0.00 0.00 3.66
538 2153 8.488651 AGACGGACCATGTTAAAATTACTTAG 57.511 34.615 0.00 0.00 0.00 2.18
565 2188 8.465201 ACTAATTCCAGTTAGTTACCTCTTACG 58.535 37.037 0.00 0.00 40.96 3.18
589 2212 6.475596 ACAAATGATCCCTCAAATGATTCC 57.524 37.500 0.00 0.00 34.37 3.01
590 2213 6.200114 ACAAATGATCCCTCAAATGATTCCT 58.800 36.000 0.00 0.00 34.37 3.36
591 2214 7.356680 ACAAATGATCCCTCAAATGATTCCTA 58.643 34.615 0.00 0.00 34.37 2.94
592 2215 7.286316 ACAAATGATCCCTCAAATGATTCCTAC 59.714 37.037 0.00 0.00 34.37 3.18
593 2216 5.974156 TGATCCCTCAAATGATTCCTACA 57.026 39.130 0.00 0.00 0.00 2.74
594 2217 6.325993 TGATCCCTCAAATGATTCCTACAA 57.674 37.500 0.00 0.00 0.00 2.41
595 2218 6.359804 TGATCCCTCAAATGATTCCTACAAG 58.640 40.000 0.00 0.00 0.00 3.16
664 2287 6.974932 ATATTCATACCAATCACTGATCGC 57.025 37.500 0.00 0.00 0.00 4.58
665 2288 2.742774 TCATACCAATCACTGATCGCG 58.257 47.619 0.00 0.00 0.00 5.87
666 2289 1.794701 CATACCAATCACTGATCGCGG 59.205 52.381 6.13 0.00 0.00 6.46
735 2358 1.088306 TGAACACACACCGACCAAAC 58.912 50.000 0.00 0.00 0.00 2.93
750 2373 3.920446 ACCAAACACACAAAAGGTTGAC 58.080 40.909 0.00 0.00 38.20 3.18
786 2409 4.026804 GTCAACGTACTGCTTAATCATCCG 60.027 45.833 0.00 0.00 0.00 4.18
792 2415 2.954753 GCTTAATCATCCGCGGGCG 61.955 63.158 27.83 17.07 39.44 6.13
850 2473 4.731961 CGTACTTACTACCATTACACTGCG 59.268 45.833 0.00 0.00 0.00 5.18
860 2501 0.096281 TTACACTGCGCGCTAATTGC 59.904 50.000 33.29 0.55 38.57 3.56
893 2534 9.627123 TTCACTAATCCCAATCCTAATTTGTAG 57.373 33.333 0.00 0.00 0.00 2.74
896 2537 9.232882 ACTAATCCCAATCCTAATTTGTAGGTA 57.767 33.333 0.00 0.00 36.16 3.08
915 2556 4.082895 AGGTAGACACTATATAAAGCGGCG 60.083 45.833 0.51 0.51 0.00 6.46
920 2561 1.278127 ACTATATAAAGCGGCGGCCAT 59.722 47.619 20.71 6.93 41.24 4.40
939 2580 2.831770 CCGGAGGCATACAGGCAT 59.168 61.111 0.00 0.00 46.14 4.40
940 2581 1.302033 CCGGAGGCATACAGGCATC 60.302 63.158 0.00 0.00 46.14 3.91
947 2588 1.142870 GGCATACAGGCATCCCAAGTA 59.857 52.381 0.00 0.00 43.51 2.24
952 2593 3.456380 ACAGGCATCCCAAGTAACAAT 57.544 42.857 0.00 0.00 0.00 2.71
962 2603 2.846827 CCAAGTAACAATCTCCCCCTCT 59.153 50.000 0.00 0.00 0.00 3.69
972 2613 2.202899 CCCCCTCTCCCTCTAGCC 59.797 72.222 0.00 0.00 0.00 3.93
973 2614 2.716203 CCCCCTCTCCCTCTAGCCA 61.716 68.421 0.00 0.00 0.00 4.75
974 2615 1.551358 CCCCTCTCCCTCTAGCCAT 59.449 63.158 0.00 0.00 0.00 4.40
980 2621 4.449376 CCCTCTCCCTCTAGCCATAACTTA 60.449 50.000 0.00 0.00 0.00 2.24
981 2622 4.770010 CCTCTCCCTCTAGCCATAACTTAG 59.230 50.000 0.00 0.00 0.00 2.18
987 2628 4.443457 CCTCTAGCCATAACTTAGCAAGCA 60.443 45.833 0.00 0.00 0.00 3.91
993 2634 4.009675 CCATAACTTAGCAAGCAACTCCA 58.990 43.478 0.00 0.00 0.00 3.86
996 2637 0.445436 CTTAGCAAGCAACTCCAGCG 59.555 55.000 0.00 0.00 37.01 5.18
1031 2672 0.969917 AGGTCTCTCAGCAGTCGCAT 60.970 55.000 0.00 0.00 42.27 4.73
1268 2909 1.645704 CTGATCGACTCCACCGACGT 61.646 60.000 0.00 0.00 38.97 4.34
1274 2915 4.351938 CTCCACCGACGTCGCCAA 62.352 66.667 31.73 15.17 38.18 4.52
1277 2918 1.876714 CCACCGACGTCGCCAATAG 60.877 63.158 31.73 19.05 38.18 1.73
1281 2922 2.185867 GACGTCGCCAATAGCCCA 59.814 61.111 0.00 0.00 38.78 5.36
1362 3003 4.459089 GACAGGCTCCAGTCCGCC 62.459 72.222 0.48 0.00 46.65 6.13
1374 3015 4.077184 TCCGCCTGCCCTAACACG 62.077 66.667 0.00 0.00 0.00 4.49
1547 3188 1.424493 CGCCTCTCCAAGATGTTCGC 61.424 60.000 0.00 0.00 0.00 4.70
1548 3189 1.092345 GCCTCTCCAAGATGTTCGCC 61.092 60.000 0.00 0.00 0.00 5.54
1575 3216 0.667792 GCCTCGACGCCAAGGATATC 60.668 60.000 5.31 0.00 34.35 1.63
1648 3289 0.320697 GGACCGGCTGTACAACTTCT 59.679 55.000 0.00 0.00 0.00 2.85
1659 3300 2.040544 CAACTTCTCCGGCGCCAAT 61.041 57.895 28.98 0.00 0.00 3.16
1877 3518 2.202878 CACCAGGGCATACGTCGG 60.203 66.667 0.00 0.00 0.00 4.79
1923 3564 1.071567 CCGAGTTCTTCCGCGACTTC 61.072 60.000 8.23 0.00 0.00 3.01
1951 3592 1.548081 CATGGTCAAGATGGGCAACA 58.452 50.000 0.00 0.00 39.74 3.33
1988 3629 0.537188 GAACAGGGCGAGATCAGGAA 59.463 55.000 0.00 0.00 0.00 3.36
2034 3675 1.202639 TCATCGATTCAACCATCGGGG 60.203 52.381 0.00 0.00 45.16 5.73
2035 3676 7.205329 TAATCATCGATTCAACCATCGGGGT 62.205 44.000 0.00 0.00 45.16 4.95
2036 3677 7.925031 TAATCATCGATTCAACCATCGGGGTA 61.925 42.308 0.00 0.00 45.16 3.69
2037 3678 9.613864 TAATCATCGATTCAACCATCGGGGTAG 62.614 44.444 0.00 0.00 45.16 3.18
2044 3685 2.780595 CCATCGGGGTAGTGCAAAG 58.219 57.895 0.00 0.00 0.00 2.77
2045 3686 0.035439 CCATCGGGGTAGTGCAAAGT 60.035 55.000 0.00 0.00 0.00 2.66
2046 3687 1.086696 CATCGGGGTAGTGCAAAGTG 58.913 55.000 0.00 0.00 0.00 3.16
2047 3688 0.676782 ATCGGGGTAGTGCAAAGTGC 60.677 55.000 0.00 0.00 45.29 4.40
2064 3746 1.093972 TGCATGCATGGTTAACTCGG 58.906 50.000 27.34 0.00 0.00 4.63
2069 3751 4.689071 CATGCATGGTTAACTCGGTACTA 58.311 43.478 19.40 0.00 0.00 1.82
2084 3766 3.546815 CGGTACTATGATTGCTTGCTTGC 60.547 47.826 0.00 0.00 0.00 4.01
2085 3767 3.629398 GGTACTATGATTGCTTGCTTGCT 59.371 43.478 0.00 0.00 0.00 3.91
2086 3768 4.096984 GGTACTATGATTGCTTGCTTGCTT 59.903 41.667 0.00 0.00 0.00 3.91
2087 3769 4.106029 ACTATGATTGCTTGCTTGCTTG 57.894 40.909 3.47 0.00 0.00 4.01
2096 3778 2.159707 GCTTGCTTGCTTGATTGCATTG 60.160 45.455 0.00 0.00 42.96 2.82
2101 3783 3.655486 CTTGCTTGATTGCATTGGTTCA 58.345 40.909 0.00 0.00 42.96 3.18
2116 3802 7.094848 TGCATTGGTTCATACATATAATCGTGG 60.095 37.037 0.00 0.00 0.00 4.94
2135 3821 5.697633 TCGTGGTTAATTAACTTGACCTGTC 59.302 40.000 23.89 8.03 42.58 3.51
2151 3837 3.739300 ACCTGTCATATATTTACGCGCAC 59.261 43.478 5.73 0.00 0.00 5.34
2152 3838 3.987868 CCTGTCATATATTTACGCGCACT 59.012 43.478 5.73 0.00 0.00 4.40
2221 3910 3.603158 TTGATTGTAGAGTGCCGCTTA 57.397 42.857 0.00 0.00 0.00 3.09
2254 3943 8.503573 TGTTTTTATTTCCATTTTAAGGGGGTT 58.496 29.630 0.00 0.00 0.00 4.11
2255 3944 9.357161 GTTTTTATTTCCATTTTAAGGGGGTTT 57.643 29.630 0.00 0.00 0.00 3.27
2288 3977 4.514816 TCATGTATTGGCATCATGTAACGG 59.485 41.667 19.44 2.89 39.61 4.44
2366 4055 9.809096 TTTATCATAGATAGATGAATCCTTCGC 57.191 33.333 0.00 0.00 39.25 4.70
2435 4136 0.609957 TGGACTTGGGCTGCATCTTG 60.610 55.000 0.50 0.00 0.00 3.02
2456 4157 0.472471 GTGTTCCACTCTTGGTCCCA 59.528 55.000 0.00 0.00 44.35 4.37
2468 4169 2.359967 GGTCCCACTCCCCTCTTCG 61.360 68.421 0.00 0.00 0.00 3.79
2470 4171 1.157751 TCCCACTCCCCTCTTCGTT 59.842 57.895 0.00 0.00 0.00 3.85
2474 4175 1.263356 CACTCCCCTCTTCGTTGGTA 58.737 55.000 0.00 0.00 0.00 3.25
2481 4182 6.210984 ACTCCCCTCTTCGTTGGTATATTATC 59.789 42.308 0.00 0.00 0.00 1.75
2495 4196 5.517770 GGTATATTATCGCCGGTATCAACAC 59.482 44.000 1.90 0.00 0.00 3.32
2512 4216 1.276989 ACACGGGTTATGAACGACCAT 59.723 47.619 0.00 0.00 37.68 3.55
2530 4234 9.642327 AACGACCATTTGTAAACTTTAGTTTTT 57.358 25.926 12.62 0.00 45.07 1.94
2560 4265 3.347958 TGTGCTTTCTAAAACAAGCCG 57.652 42.857 1.62 0.00 44.15 5.52
2565 4270 5.342259 GTGCTTTCTAAAACAAGCCGTTATG 59.658 40.000 1.62 0.00 44.15 1.90
2566 4271 5.009210 TGCTTTCTAAAACAAGCCGTTATGT 59.991 36.000 1.62 0.00 44.15 2.29
2570 4275 6.621316 TCTAAAACAAGCCGTTATGTTTCA 57.379 33.333 9.26 0.00 46.09 2.69
2593 4298 0.326595 TTTGCCGCCAAGTCCTCATA 59.673 50.000 0.00 0.00 31.52 2.15
2602 4307 3.391296 GCCAAGTCCTCATAACCCAGATA 59.609 47.826 0.00 0.00 0.00 1.98
2608 4313 6.153924 AGTCCTCATAACCCAGATATCCTTT 58.846 40.000 0.00 0.00 0.00 3.11
2609 4314 7.313731 AGTCCTCATAACCCAGATATCCTTTA 58.686 38.462 0.00 0.00 0.00 1.85
2610 4315 7.235812 AGTCCTCATAACCCAGATATCCTTTAC 59.764 40.741 0.00 0.00 0.00 2.01
2612 4317 7.794683 TCCTCATAACCCAGATATCCTTTACTT 59.205 37.037 0.00 0.00 0.00 2.24
2613 4318 9.101325 CCTCATAACCCAGATATCCTTTACTTA 57.899 37.037 0.00 0.00 0.00 2.24
2615 4320 9.892444 TCATAACCCAGATATCCTTTACTTAGA 57.108 33.333 0.00 0.00 0.00 2.10
2619 4324 9.853177 AACCCAGATATCCTTTACTTAGAAATG 57.147 33.333 0.00 0.00 0.00 2.32
2620 4325 8.440771 ACCCAGATATCCTTTACTTAGAAATGG 58.559 37.037 0.00 0.00 0.00 3.16
2621 4326 7.885399 CCCAGATATCCTTTACTTAGAAATGGG 59.115 40.741 0.00 0.95 0.00 4.00
2622 4327 8.660435 CCAGATATCCTTTACTTAGAAATGGGA 58.340 37.037 0.00 0.00 0.00 4.37
2640 4345 3.442273 TGGGATTTTATCACAGAAACGGC 59.558 43.478 0.00 0.00 37.88 5.68
2641 4346 3.442273 GGGATTTTATCACAGAAACGGCA 59.558 43.478 0.00 0.00 31.40 5.69
2642 4347 4.082463 GGGATTTTATCACAGAAACGGCAA 60.082 41.667 0.00 0.00 31.40 4.52
2643 4348 4.857037 GGATTTTATCACAGAAACGGCAAC 59.143 41.667 0.00 0.00 0.00 4.17
2644 4349 4.902443 TTTTATCACAGAAACGGCAACA 57.098 36.364 0.00 0.00 0.00 3.33
2645 4350 3.889196 TTATCACAGAAACGGCAACAC 57.111 42.857 0.00 0.00 0.00 3.32
2646 4351 0.951558 ATCACAGAAACGGCAACACC 59.048 50.000 0.00 0.00 0.00 4.16
2647 4352 0.107410 TCACAGAAACGGCAACACCT 60.107 50.000 0.00 0.00 35.61 4.00
2648 4353 1.139256 TCACAGAAACGGCAACACCTA 59.861 47.619 0.00 0.00 35.61 3.08
2649 4354 2.151202 CACAGAAACGGCAACACCTAT 58.849 47.619 0.00 0.00 35.61 2.57
2650 4355 3.007074 TCACAGAAACGGCAACACCTATA 59.993 43.478 0.00 0.00 35.61 1.31
2651 4356 3.124636 CACAGAAACGGCAACACCTATAC 59.875 47.826 0.00 0.00 35.61 1.47
2652 4357 2.676342 CAGAAACGGCAACACCTATACC 59.324 50.000 0.00 0.00 35.61 2.73
2653 4358 2.303600 AGAAACGGCAACACCTATACCA 59.696 45.455 0.00 0.00 35.61 3.25
2654 4359 2.863132 AACGGCAACACCTATACCAA 57.137 45.000 0.00 0.00 35.61 3.67
2655 4360 2.863132 ACGGCAACACCTATACCAAA 57.137 45.000 0.00 0.00 35.61 3.28
2656 4361 2.706890 ACGGCAACACCTATACCAAAG 58.293 47.619 0.00 0.00 35.61 2.77
2657 4362 2.303600 ACGGCAACACCTATACCAAAGA 59.696 45.455 0.00 0.00 35.61 2.52
2658 4363 3.054655 ACGGCAACACCTATACCAAAGAT 60.055 43.478 0.00 0.00 35.61 2.40
2659 4364 3.560068 CGGCAACACCTATACCAAAGATC 59.440 47.826 0.00 0.00 35.61 2.75
2660 4365 3.560068 GGCAACACCTATACCAAAGATCG 59.440 47.826 0.00 0.00 34.51 3.69
2661 4366 4.439057 GCAACACCTATACCAAAGATCGA 58.561 43.478 0.00 0.00 0.00 3.59
2662 4367 5.057149 GCAACACCTATACCAAAGATCGAT 58.943 41.667 0.00 0.00 0.00 3.59
2663 4368 6.220930 GCAACACCTATACCAAAGATCGATA 58.779 40.000 0.00 0.00 0.00 2.92
2664 4369 6.145696 GCAACACCTATACCAAAGATCGATAC 59.854 42.308 0.00 0.00 0.00 2.24
2665 4370 6.342338 ACACCTATACCAAAGATCGATACC 57.658 41.667 0.00 0.00 0.00 2.73
2666 4371 5.836898 ACACCTATACCAAAGATCGATACCA 59.163 40.000 0.00 0.00 0.00 3.25
2667 4372 6.325545 ACACCTATACCAAAGATCGATACCAA 59.674 38.462 0.00 0.00 0.00 3.67
2668 4373 6.868864 CACCTATACCAAAGATCGATACCAAG 59.131 42.308 0.00 0.00 0.00 3.61
2669 4374 6.553852 ACCTATACCAAAGATCGATACCAAGT 59.446 38.462 0.00 0.00 0.00 3.16
2670 4375 7.727186 ACCTATACCAAAGATCGATACCAAGTA 59.273 37.037 0.00 0.00 0.00 2.24
2671 4376 8.582437 CCTATACCAAAGATCGATACCAAGTAA 58.418 37.037 0.00 0.00 0.00 2.24
2672 4377 9.627395 CTATACCAAAGATCGATACCAAGTAAG 57.373 37.037 0.00 0.00 0.00 2.34
2673 4378 6.295719 ACCAAAGATCGATACCAAGTAAGT 57.704 37.500 0.00 0.00 0.00 2.24
2674 4379 6.708285 ACCAAAGATCGATACCAAGTAAGTT 58.292 36.000 0.00 0.00 0.00 2.66
2675 4380 6.594159 ACCAAAGATCGATACCAAGTAAGTTG 59.406 38.462 0.00 0.00 35.71 3.16
2676 4381 6.594159 CCAAAGATCGATACCAAGTAAGTTGT 59.406 38.462 0.00 0.00 33.87 3.32
2677 4382 7.119262 CCAAAGATCGATACCAAGTAAGTTGTT 59.881 37.037 0.00 0.00 33.87 2.83
2678 4383 7.829378 AAGATCGATACCAAGTAAGTTGTTC 57.171 36.000 0.00 0.00 33.87 3.18
2679 4384 6.338937 AGATCGATACCAAGTAAGTTGTTCC 58.661 40.000 0.00 0.00 33.87 3.62
2680 4385 4.824289 TCGATACCAAGTAAGTTGTTCCC 58.176 43.478 0.00 0.00 33.87 3.97
2681 4386 4.283978 TCGATACCAAGTAAGTTGTTCCCA 59.716 41.667 0.00 0.00 33.87 4.37
2682 4387 4.390909 CGATACCAAGTAAGTTGTTCCCAC 59.609 45.833 0.00 0.00 33.87 4.61
2683 4388 3.945640 ACCAAGTAAGTTGTTCCCACT 57.054 42.857 0.00 0.00 33.87 4.00
2684 4389 6.572898 CGATACCAAGTAAGTTGTTCCCACTA 60.573 42.308 0.00 0.00 33.87 2.74
2685 4390 5.376756 ACCAAGTAAGTTGTTCCCACTAA 57.623 39.130 0.00 0.00 33.87 2.24
2686 4391 5.757988 ACCAAGTAAGTTGTTCCCACTAAA 58.242 37.500 0.00 0.00 33.87 1.85
2687 4392 6.189133 ACCAAGTAAGTTGTTCCCACTAAAA 58.811 36.000 0.00 0.00 33.87 1.52
2688 4393 6.095860 ACCAAGTAAGTTGTTCCCACTAAAAC 59.904 38.462 0.00 0.00 33.87 2.43
2689 4394 5.996669 AGTAAGTTGTTCCCACTAAAACG 57.003 39.130 0.00 0.00 0.00 3.60
2690 4395 5.673514 AGTAAGTTGTTCCCACTAAAACGA 58.326 37.500 0.00 0.00 0.00 3.85
2691 4396 4.888038 AAGTTGTTCCCACTAAAACGAC 57.112 40.909 0.00 0.00 39.20 4.34
2692 4397 2.867975 AGTTGTTCCCACTAAAACGACG 59.132 45.455 0.00 0.00 42.24 5.12
2693 4398 2.865551 GTTGTTCCCACTAAAACGACGA 59.134 45.455 0.00 0.00 31.90 4.20
2694 4399 2.746269 TGTTCCCACTAAAACGACGAG 58.254 47.619 0.00 0.00 0.00 4.18
2695 4400 2.101249 TGTTCCCACTAAAACGACGAGT 59.899 45.455 0.00 0.00 0.00 4.18
2696 4401 3.317711 TGTTCCCACTAAAACGACGAGTA 59.682 43.478 0.00 0.00 0.00 2.59
2697 4402 4.202101 TGTTCCCACTAAAACGACGAGTAA 60.202 41.667 0.00 0.00 0.00 2.24
2698 4403 4.582701 TCCCACTAAAACGACGAGTAAA 57.417 40.909 0.00 0.00 0.00 2.01
2699 4404 4.298332 TCCCACTAAAACGACGAGTAAAC 58.702 43.478 0.00 0.00 0.00 2.01
2700 4405 4.050553 CCCACTAAAACGACGAGTAAACA 58.949 43.478 0.00 0.00 0.00 2.83
2701 4406 4.687483 CCCACTAAAACGACGAGTAAACAT 59.313 41.667 0.00 0.00 0.00 2.71
2702 4407 5.178067 CCCACTAAAACGACGAGTAAACATT 59.822 40.000 0.00 0.00 0.00 2.71
2703 4408 6.068931 CCACTAAAACGACGAGTAAACATTG 58.931 40.000 0.00 0.00 0.00 2.82
2704 4409 6.292488 CCACTAAAACGACGAGTAAACATTGT 60.292 38.462 0.00 0.00 0.00 2.71
2705 4410 7.121272 CACTAAAACGACGAGTAAACATTGTT 58.879 34.615 0.00 0.00 0.00 2.83
2706 4411 7.637132 CACTAAAACGACGAGTAAACATTGTTT 59.363 33.333 18.13 18.13 0.00 2.83
2707 4412 7.847564 ACTAAAACGACGAGTAAACATTGTTTC 59.152 33.333 17.64 10.02 0.00 2.78
2708 4413 5.978934 AACGACGAGTAAACATTGTTTCT 57.021 34.783 17.64 14.02 0.00 2.52
2709 4414 5.978934 ACGACGAGTAAACATTGTTTCTT 57.021 34.783 17.64 7.92 0.00 2.52
2710 4415 5.970879 ACGACGAGTAAACATTGTTTCTTC 58.029 37.500 17.64 14.52 0.00 2.87
2711 4416 5.521010 ACGACGAGTAAACATTGTTTCTTCA 59.479 36.000 17.64 0.00 0.00 3.02
2712 4417 5.839239 CGACGAGTAAACATTGTTTCTTCAC 59.161 40.000 17.64 10.71 0.00 3.18
2713 4418 5.734311 ACGAGTAAACATTGTTTCTTCACG 58.266 37.500 17.64 18.53 0.00 4.35
2714 4419 5.292589 ACGAGTAAACATTGTTTCTTCACGT 59.707 36.000 17.64 19.03 0.00 4.49
2715 4420 5.615581 CGAGTAAACATTGTTTCTTCACGTG 59.384 40.000 17.64 9.94 0.00 4.49
2716 4421 6.508880 CGAGTAAACATTGTTTCTTCACGTGA 60.509 38.462 15.76 15.76 0.00 4.35
2717 4422 7.079182 AGTAAACATTGTTTCTTCACGTGAA 57.921 32.000 28.07 28.07 0.00 3.18
2718 4423 7.531716 AGTAAACATTGTTTCTTCACGTGAAA 58.468 30.769 29.32 18.12 33.07 2.69
2719 4424 6.869421 AAACATTGTTTCTTCACGTGAAAG 57.131 33.333 29.32 22.24 34.58 2.62
2720 4425 5.811399 ACATTGTTTCTTCACGTGAAAGA 57.189 34.783 29.32 23.86 34.58 2.52
2721 4426 5.569413 ACATTGTTTCTTCACGTGAAAGAC 58.431 37.500 29.32 24.91 34.58 3.01
2722 4427 5.123186 ACATTGTTTCTTCACGTGAAAGACA 59.877 36.000 29.32 26.75 34.58 3.41
2723 4428 4.857871 TGTTTCTTCACGTGAAAGACAG 57.142 40.909 29.32 18.51 34.58 3.51
2724 4429 3.621268 TGTTTCTTCACGTGAAAGACAGG 59.379 43.478 29.32 17.62 39.84 4.00
2725 4430 3.536956 TTCTTCACGTGAAAGACAGGT 57.463 42.857 29.32 0.00 46.48 4.00
2729 4434 3.290776 ACGTGAAAGACAGGTGCTC 57.709 52.632 0.00 0.00 44.34 4.26
2730 4435 0.249911 ACGTGAAAGACAGGTGCTCC 60.250 55.000 0.00 0.00 44.34 4.70
2731 4436 0.034059 CGTGAAAGACAGGTGCTCCT 59.966 55.000 0.18 0.18 46.37 3.69
2732 4437 1.272490 CGTGAAAGACAGGTGCTCCTA 59.728 52.381 7.08 0.00 43.07 2.94
2733 4438 2.093973 CGTGAAAGACAGGTGCTCCTAT 60.094 50.000 7.08 0.00 43.07 2.57
2734 4439 3.130516 CGTGAAAGACAGGTGCTCCTATA 59.869 47.826 7.08 0.00 43.07 1.31
2735 4440 4.688021 GTGAAAGACAGGTGCTCCTATAG 58.312 47.826 7.08 0.00 43.07 1.31
2736 4441 4.402793 GTGAAAGACAGGTGCTCCTATAGA 59.597 45.833 7.08 0.00 43.07 1.98
2737 4442 5.069781 GTGAAAGACAGGTGCTCCTATAGAT 59.930 44.000 7.08 0.00 43.07 1.98
2738 4443 5.069648 TGAAAGACAGGTGCTCCTATAGATG 59.930 44.000 7.08 0.00 43.07 2.90
2739 4444 4.191804 AGACAGGTGCTCCTATAGATGT 57.808 45.455 7.08 0.63 43.07 3.06
2740 4445 3.894427 AGACAGGTGCTCCTATAGATGTG 59.106 47.826 7.08 0.00 43.07 3.21
2741 4446 3.891977 GACAGGTGCTCCTATAGATGTGA 59.108 47.826 7.08 0.00 43.07 3.58
2742 4447 4.290093 ACAGGTGCTCCTATAGATGTGAA 58.710 43.478 7.08 0.00 43.07 3.18
2743 4448 4.716784 ACAGGTGCTCCTATAGATGTGAAA 59.283 41.667 7.08 0.00 43.07 2.69
2744 4449 5.189736 ACAGGTGCTCCTATAGATGTGAAAA 59.810 40.000 7.08 0.00 43.07 2.29
2745 4450 5.757320 CAGGTGCTCCTATAGATGTGAAAAG 59.243 44.000 7.08 0.00 43.07 2.27
2746 4451 5.663106 AGGTGCTCCTATAGATGTGAAAAGA 59.337 40.000 5.27 0.00 43.12 2.52
2747 4452 6.156949 AGGTGCTCCTATAGATGTGAAAAGAA 59.843 38.462 5.27 0.00 43.12 2.52
2748 4453 6.823689 GGTGCTCCTATAGATGTGAAAAGAAA 59.176 38.462 0.00 0.00 0.00 2.52
2749 4454 7.336931 GGTGCTCCTATAGATGTGAAAAGAAAA 59.663 37.037 0.00 0.00 0.00 2.29
2750 4455 8.897752 GTGCTCCTATAGATGTGAAAAGAAAAT 58.102 33.333 0.00 0.00 0.00 1.82
2751 4456 9.466497 TGCTCCTATAGATGTGAAAAGAAAATT 57.534 29.630 0.00 0.00 0.00 1.82
2762 4467 9.979578 ATGTGAAAAGAAAATTAGCATACAACA 57.020 25.926 0.00 0.00 0.00 3.33
2763 4468 9.243637 TGTGAAAAGAAAATTAGCATACAACAC 57.756 29.630 0.00 0.00 0.00 3.32
2764 4469 9.463443 GTGAAAAGAAAATTAGCATACAACACT 57.537 29.630 0.00 0.00 0.00 3.55
2768 4473 8.728088 AAGAAAATTAGCATACAACACTTTCG 57.272 30.769 0.00 0.00 0.00 3.46
2769 4474 8.094798 AGAAAATTAGCATACAACACTTTCGA 57.905 30.769 0.00 0.00 0.00 3.71
2770 4475 8.564574 AGAAAATTAGCATACAACACTTTCGAA 58.435 29.630 0.00 0.00 0.00 3.71
2771 4476 8.728088 AAAATTAGCATACAACACTTTCGAAG 57.272 30.769 0.00 0.00 0.00 3.79
2772 4477 7.667043 AATTAGCATACAACACTTTCGAAGA 57.333 32.000 0.00 0.00 0.00 2.87
2773 4478 7.849804 ATTAGCATACAACACTTTCGAAGAT 57.150 32.000 0.00 0.00 35.04 2.40
2774 4479 5.786401 AGCATACAACACTTTCGAAGATC 57.214 39.130 0.00 0.00 35.04 2.75
2775 4480 4.631813 AGCATACAACACTTTCGAAGATCC 59.368 41.667 0.00 0.00 35.04 3.36
2776 4481 4.391830 GCATACAACACTTTCGAAGATCCA 59.608 41.667 0.00 0.00 35.04 3.41
2777 4482 5.446473 GCATACAACACTTTCGAAGATCCAG 60.446 44.000 0.00 0.00 35.04 3.86
2778 4483 4.073293 ACAACACTTTCGAAGATCCAGT 57.927 40.909 0.00 0.00 35.04 4.00
2779 4484 4.451900 ACAACACTTTCGAAGATCCAGTT 58.548 39.130 0.00 0.00 35.04 3.16
2780 4485 4.273480 ACAACACTTTCGAAGATCCAGTTG 59.727 41.667 17.98 17.98 39.57 3.16
2781 4486 4.336889 ACACTTTCGAAGATCCAGTTGA 57.663 40.909 0.00 0.00 35.04 3.18
2782 4487 4.058817 ACACTTTCGAAGATCCAGTTGAC 58.941 43.478 0.00 0.00 35.04 3.18
2783 4488 4.202264 ACACTTTCGAAGATCCAGTTGACT 60.202 41.667 0.00 0.00 35.04 3.41
2784 4489 4.151335 CACTTTCGAAGATCCAGTTGACTG 59.849 45.833 4.15 4.15 39.25 3.51
2785 4490 4.039245 ACTTTCGAAGATCCAGTTGACTGA 59.961 41.667 12.54 0.00 41.15 3.41
2786 4491 3.857549 TCGAAGATCCAGTTGACTGAG 57.142 47.619 12.54 3.46 46.59 3.35
2787 4492 2.493675 TCGAAGATCCAGTTGACTGAGG 59.506 50.000 12.54 0.00 46.59 3.86
2788 4493 2.493675 CGAAGATCCAGTTGACTGAGGA 59.506 50.000 12.54 2.92 46.59 3.71
2789 4494 3.674682 CGAAGATCCAGTTGACTGAGGAC 60.675 52.174 12.54 2.11 46.59 3.85
2790 4495 2.894731 AGATCCAGTTGACTGAGGACA 58.105 47.619 12.54 0.00 46.59 4.02
2791 4496 3.448934 AGATCCAGTTGACTGAGGACAT 58.551 45.455 12.54 0.00 46.59 3.06
2792 4497 3.197333 AGATCCAGTTGACTGAGGACATG 59.803 47.826 12.54 0.00 46.59 3.21
2793 4498 2.329267 TCCAGTTGACTGAGGACATGT 58.671 47.619 12.54 0.00 46.59 3.21
2794 4499 2.705658 TCCAGTTGACTGAGGACATGTT 59.294 45.455 12.54 0.00 46.59 2.71
2795 4500 3.136443 TCCAGTTGACTGAGGACATGTTT 59.864 43.478 12.54 0.00 46.59 2.83
2796 4501 3.885297 CCAGTTGACTGAGGACATGTTTT 59.115 43.478 12.54 0.00 46.59 2.43
2797 4502 5.063204 CCAGTTGACTGAGGACATGTTTTA 58.937 41.667 12.54 0.00 46.59 1.52
2798 4503 5.707298 CCAGTTGACTGAGGACATGTTTTAT 59.293 40.000 12.54 0.00 46.59 1.40
2799 4504 6.207417 CCAGTTGACTGAGGACATGTTTTATT 59.793 38.462 12.54 0.00 46.59 1.40
2800 4505 7.255590 CCAGTTGACTGAGGACATGTTTTATTT 60.256 37.037 12.54 0.00 46.59 1.40
2801 4506 7.805071 CAGTTGACTGAGGACATGTTTTATTTC 59.195 37.037 5.19 0.00 46.59 2.17
2802 4507 7.721399 AGTTGACTGAGGACATGTTTTATTTCT 59.279 33.333 0.00 0.00 0.00 2.52
2803 4508 8.352942 GTTGACTGAGGACATGTTTTATTTCTT 58.647 33.333 0.00 0.00 0.00 2.52
2804 4509 8.099364 TGACTGAGGACATGTTTTATTTCTTC 57.901 34.615 0.00 0.00 0.00 2.87
2805 4510 7.174946 TGACTGAGGACATGTTTTATTTCTTCC 59.825 37.037 0.00 0.00 0.00 3.46
2806 4511 7.004086 ACTGAGGACATGTTTTATTTCTTCCA 58.996 34.615 0.00 0.00 0.00 3.53
2807 4512 7.175641 ACTGAGGACATGTTTTATTTCTTCCAG 59.824 37.037 0.00 0.00 0.00 3.86
2808 4513 7.004086 TGAGGACATGTTTTATTTCTTCCAGT 58.996 34.615 0.00 0.00 0.00 4.00
2809 4514 7.040478 TGAGGACATGTTTTATTTCTTCCAGTG 60.040 37.037 0.00 0.00 0.00 3.66
2810 4515 6.209391 AGGACATGTTTTATTTCTTCCAGTGG 59.791 38.462 1.40 1.40 0.00 4.00
2811 4516 6.208599 GGACATGTTTTATTTCTTCCAGTGGA 59.791 38.462 8.12 8.12 0.00 4.02
2812 4517 7.255801 GGACATGTTTTATTTCTTCCAGTGGAA 60.256 37.037 23.23 23.23 39.66 3.53
2822 4527 0.693049 TCCAGTGGAAGAAAGAGGGC 59.307 55.000 10.20 0.00 0.00 5.19
2823 4528 0.322906 CCAGTGGAAGAAAGAGGGCC 60.323 60.000 1.68 0.00 0.00 5.80
2824 4529 0.322906 CAGTGGAAGAAAGAGGGCCC 60.323 60.000 16.46 16.46 0.00 5.80
2825 4530 0.476611 AGTGGAAGAAAGAGGGCCCT 60.477 55.000 29.18 29.18 0.00 5.19
2826 4531 0.405973 GTGGAAGAAAGAGGGCCCTT 59.594 55.000 29.39 10.84 0.00 3.95
2827 4532 1.158007 TGGAAGAAAGAGGGCCCTTT 58.842 50.000 29.39 19.74 38.92 3.11
2828 4533 1.203050 TGGAAGAAAGAGGGCCCTTTG 60.203 52.381 29.39 0.00 36.58 2.77
2829 4534 1.550327 GAAGAAAGAGGGCCCTTTGG 58.450 55.000 29.39 0.00 36.58 3.28
2841 4546 2.115343 CCCTTTGGCTAGTGTTCCTC 57.885 55.000 0.00 0.00 0.00 3.71
2842 4547 1.676014 CCCTTTGGCTAGTGTTCCTCG 60.676 57.143 0.00 0.00 0.00 4.63
2843 4548 1.676014 CCTTTGGCTAGTGTTCCTCGG 60.676 57.143 0.00 0.00 0.00 4.63
2844 4549 0.323629 TTTGGCTAGTGTTCCTCGGG 59.676 55.000 0.00 0.00 0.00 5.14
2845 4550 2.180159 TTGGCTAGTGTTCCTCGGGC 62.180 60.000 0.00 0.00 0.00 6.13
2846 4551 2.359967 GGCTAGTGTTCCTCGGGCT 61.360 63.158 0.00 0.00 0.00 5.19
2847 4552 1.597461 GCTAGTGTTCCTCGGGCTT 59.403 57.895 0.00 0.00 0.00 4.35
2848 4553 0.460459 GCTAGTGTTCCTCGGGCTTC 60.460 60.000 0.00 0.00 0.00 3.86
2849 4554 0.175989 CTAGTGTTCCTCGGGCTTCC 59.824 60.000 0.00 0.00 0.00 3.46
2850 4555 1.262640 TAGTGTTCCTCGGGCTTCCC 61.263 60.000 0.00 0.00 41.09 3.97
2859 4564 3.961414 GGGCTTCCCGTTGGTCCA 61.961 66.667 0.00 0.00 32.13 4.02
2860 4565 2.671963 GGCTTCCCGTTGGTCCAC 60.672 66.667 0.00 0.00 0.00 4.02
2861 4566 2.671963 GCTTCCCGTTGGTCCACC 60.672 66.667 0.00 0.00 0.00 4.61
2862 4567 3.157680 CTTCCCGTTGGTCCACCT 58.842 61.111 0.00 0.00 36.82 4.00
2863 4568 1.003718 CTTCCCGTTGGTCCACCTC 60.004 63.158 0.00 0.00 36.82 3.85
2864 4569 2.781595 CTTCCCGTTGGTCCACCTCG 62.782 65.000 0.00 0.00 36.82 4.63
2865 4570 3.622826 CCCGTTGGTCCACCTCGT 61.623 66.667 0.00 0.00 36.82 4.18
2866 4571 2.048503 CCGTTGGTCCACCTCGTC 60.049 66.667 0.00 0.00 36.82 4.20
2867 4572 2.571216 CCGTTGGTCCACCTCGTCT 61.571 63.158 0.00 0.00 36.82 4.18
2868 4573 1.366366 CGTTGGTCCACCTCGTCTT 59.634 57.895 0.00 0.00 36.82 3.01
2869 4574 0.666577 CGTTGGTCCACCTCGTCTTC 60.667 60.000 0.00 0.00 36.82 2.87
2870 4575 0.680061 GTTGGTCCACCTCGTCTTCT 59.320 55.000 0.00 0.00 36.82 2.85
2871 4576 0.679505 TTGGTCCACCTCGTCTTCTG 59.320 55.000 0.00 0.00 36.82 3.02
2872 4577 0.469331 TGGTCCACCTCGTCTTCTGT 60.469 55.000 0.00 0.00 36.82 3.41
2873 4578 0.038159 GGTCCACCTCGTCTTCTGTG 60.038 60.000 0.00 0.00 0.00 3.66
2874 4579 4.996976 CCACCTCGTCTTCTGTGG 57.003 61.111 0.00 0.00 42.01 4.17
2875 4580 0.469331 TCCACCTCGTCTTCTGTGGT 60.469 55.000 7.34 0.00 46.59 4.16
2876 4581 0.038159 CCACCTCGTCTTCTGTGGTC 60.038 60.000 0.00 0.00 42.61 4.02
2877 4582 0.962489 CACCTCGTCTTCTGTGGTCT 59.038 55.000 0.00 0.00 0.00 3.85
2878 4583 1.341531 CACCTCGTCTTCTGTGGTCTT 59.658 52.381 0.00 0.00 0.00 3.01
2879 4584 2.557056 CACCTCGTCTTCTGTGGTCTTA 59.443 50.000 0.00 0.00 0.00 2.10
2880 4585 2.820787 ACCTCGTCTTCTGTGGTCTTAG 59.179 50.000 0.00 0.00 0.00 2.18
2881 4586 2.164624 CCTCGTCTTCTGTGGTCTTAGG 59.835 54.545 0.00 0.00 0.00 2.69
2882 4587 1.544691 TCGTCTTCTGTGGTCTTAGGC 59.455 52.381 0.00 0.00 0.00 3.93
2883 4588 1.404315 CGTCTTCTGTGGTCTTAGGCC 60.404 57.143 0.00 0.00 0.00 5.19
2884 4589 1.623811 GTCTTCTGTGGTCTTAGGCCA 59.376 52.381 0.00 0.00 0.00 5.36
2885 4590 2.237392 GTCTTCTGTGGTCTTAGGCCAT 59.763 50.000 9.42 0.00 38.40 4.40
2886 4591 2.237143 TCTTCTGTGGTCTTAGGCCATG 59.763 50.000 9.42 5.66 38.40 3.66
2887 4592 1.951209 TCTGTGGTCTTAGGCCATGA 58.049 50.000 9.42 8.12 38.40 3.07
2888 4593 2.265367 TCTGTGGTCTTAGGCCATGAA 58.735 47.619 9.42 0.00 38.40 2.57
2889 4594 2.237143 TCTGTGGTCTTAGGCCATGAAG 59.763 50.000 9.42 7.79 38.40 3.02
2890 4595 1.281867 TGTGGTCTTAGGCCATGAAGG 59.718 52.381 9.42 0.00 38.40 3.46
2901 4606 2.997899 CATGAAGGCGTGGAGGATC 58.002 57.895 0.00 0.00 0.00 3.36
2912 4617 2.194326 GAGGATCCTGGCCCTTGC 59.806 66.667 22.02 0.00 31.84 4.01
2937 4642 1.593196 GGGGGCTTTGTTTTTCTTGC 58.407 50.000 0.00 0.00 0.00 4.01
2938 4643 1.140852 GGGGGCTTTGTTTTTCTTGCT 59.859 47.619 0.00 0.00 0.00 3.91
2939 4644 2.421388 GGGGGCTTTGTTTTTCTTGCTT 60.421 45.455 0.00 0.00 0.00 3.91
2940 4645 3.278574 GGGGCTTTGTTTTTCTTGCTTT 58.721 40.909 0.00 0.00 0.00 3.51
2941 4646 3.694072 GGGGCTTTGTTTTTCTTGCTTTT 59.306 39.130 0.00 0.00 0.00 2.27
2942 4647 4.157656 GGGGCTTTGTTTTTCTTGCTTTTT 59.842 37.500 0.00 0.00 0.00 1.94
2943 4648 5.094812 GGGCTTTGTTTTTCTTGCTTTTTG 58.905 37.500 0.00 0.00 0.00 2.44
2944 4649 5.106357 GGGCTTTGTTTTTCTTGCTTTTTGA 60.106 36.000 0.00 0.00 0.00 2.69
2945 4650 6.023435 GGCTTTGTTTTTCTTGCTTTTTGAG 58.977 36.000 0.00 0.00 0.00 3.02
2946 4651 6.348458 GGCTTTGTTTTTCTTGCTTTTTGAGT 60.348 34.615 0.00 0.00 0.00 3.41
2947 4652 7.077605 GCTTTGTTTTTCTTGCTTTTTGAGTT 58.922 30.769 0.00 0.00 0.00 3.01
2948 4653 7.591057 GCTTTGTTTTTCTTGCTTTTTGAGTTT 59.409 29.630 0.00 0.00 0.00 2.66
2949 4654 9.449550 CTTTGTTTTTCTTGCTTTTTGAGTTTT 57.550 25.926 0.00 0.00 0.00 2.43
2950 4655 8.779603 TTGTTTTTCTTGCTTTTTGAGTTTTG 57.220 26.923 0.00 0.00 0.00 2.44
2951 4656 7.924940 TGTTTTTCTTGCTTTTTGAGTTTTGT 58.075 26.923 0.00 0.00 0.00 2.83
2952 4657 8.401709 TGTTTTTCTTGCTTTTTGAGTTTTGTT 58.598 25.926 0.00 0.00 0.00 2.83
2953 4658 9.871299 GTTTTTCTTGCTTTTTGAGTTTTGTTA 57.129 25.926 0.00 0.00 0.00 2.41
2955 4660 7.826260 TTCTTGCTTTTTGAGTTTTGTTAGG 57.174 32.000 0.00 0.00 0.00 2.69
2956 4661 6.337356 TCTTGCTTTTTGAGTTTTGTTAGGG 58.663 36.000 0.00 0.00 0.00 3.53
2957 4662 5.669164 TGCTTTTTGAGTTTTGTTAGGGT 57.331 34.783 0.00 0.00 0.00 4.34
2958 4663 6.043854 TGCTTTTTGAGTTTTGTTAGGGTT 57.956 33.333 0.00 0.00 0.00 4.11
2959 4664 6.468543 TGCTTTTTGAGTTTTGTTAGGGTTT 58.531 32.000 0.00 0.00 0.00 3.27
2960 4665 6.370166 TGCTTTTTGAGTTTTGTTAGGGTTTG 59.630 34.615 0.00 0.00 0.00 2.93
2961 4666 6.674519 GCTTTTTGAGTTTTGTTAGGGTTTGC 60.675 38.462 0.00 0.00 0.00 3.68
2962 4667 3.701532 TGAGTTTTGTTAGGGTTTGCG 57.298 42.857 0.00 0.00 0.00 4.85
2963 4668 3.018149 TGAGTTTTGTTAGGGTTTGCGT 58.982 40.909 0.00 0.00 0.00 5.24
2964 4669 3.065648 TGAGTTTTGTTAGGGTTTGCGTC 59.934 43.478 0.00 0.00 0.00 5.19
2965 4670 3.284617 AGTTTTGTTAGGGTTTGCGTCT 58.715 40.909 0.00 0.00 0.00 4.18
2966 4671 3.697542 AGTTTTGTTAGGGTTTGCGTCTT 59.302 39.130 0.00 0.00 0.00 3.01
2967 4672 3.701532 TTTGTTAGGGTTTGCGTCTTG 57.298 42.857 0.00 0.00 0.00 3.02
2968 4673 0.948678 TGTTAGGGTTTGCGTCTTGC 59.051 50.000 0.00 0.00 46.70 4.01
2969 4674 1.235724 GTTAGGGTTTGCGTCTTGCT 58.764 50.000 0.00 0.00 46.63 3.91
2970 4675 1.197036 GTTAGGGTTTGCGTCTTGCTC 59.803 52.381 0.00 0.00 46.63 4.26
2971 4676 0.394938 TAGGGTTTGCGTCTTGCTCA 59.605 50.000 0.00 0.00 46.63 4.26
2972 4677 1.166531 AGGGTTTGCGTCTTGCTCAC 61.167 55.000 0.00 0.00 46.63 3.51
2973 4678 1.444119 GGGTTTGCGTCTTGCTCACA 61.444 55.000 0.00 0.00 46.63 3.58
2974 4679 0.040958 GGTTTGCGTCTTGCTCACAG 60.041 55.000 0.00 0.00 46.63 3.66
2975 4680 0.937304 GTTTGCGTCTTGCTCACAGA 59.063 50.000 0.00 0.00 46.63 3.41
2976 4681 1.070309 GTTTGCGTCTTGCTCACAGAG 60.070 52.381 0.00 0.00 46.63 3.35
2996 4701 4.863925 GAGGCGGCGACTGCTCTC 62.864 72.222 25.55 0.00 42.25 3.20
2999 4704 4.121669 GCGGCGACTGCTCTCTGA 62.122 66.667 12.98 0.00 42.25 3.27
3000 4705 2.568612 CGGCGACTGCTCTCTGAA 59.431 61.111 0.00 0.00 42.25 3.02
3001 4706 1.515952 CGGCGACTGCTCTCTGAAG 60.516 63.158 0.00 0.00 42.25 3.02
3002 4707 1.886585 GGCGACTGCTCTCTGAAGA 59.113 57.895 0.00 0.00 42.25 2.87
3003 4708 0.459489 GGCGACTGCTCTCTGAAGAT 59.541 55.000 0.00 0.00 42.25 2.40
3004 4709 1.558741 GCGACTGCTCTCTGAAGATG 58.441 55.000 0.00 0.00 38.39 2.90
3005 4710 1.802136 GCGACTGCTCTCTGAAGATGG 60.802 57.143 0.00 0.00 38.39 3.51
3006 4711 1.747924 CGACTGCTCTCTGAAGATGGA 59.252 52.381 0.00 0.00 0.00 3.41
3007 4712 2.165234 CGACTGCTCTCTGAAGATGGAA 59.835 50.000 0.00 0.00 0.00 3.53
3008 4713 3.181477 CGACTGCTCTCTGAAGATGGAAT 60.181 47.826 0.00 0.00 0.00 3.01
3009 4714 4.037327 CGACTGCTCTCTGAAGATGGAATA 59.963 45.833 0.00 0.00 0.00 1.75
3010 4715 5.451103 CGACTGCTCTCTGAAGATGGAATAA 60.451 44.000 0.00 0.00 0.00 1.40
3011 4716 6.305272 ACTGCTCTCTGAAGATGGAATAAA 57.695 37.500 0.00 0.00 0.00 1.40
3012 4717 6.347696 ACTGCTCTCTGAAGATGGAATAAAG 58.652 40.000 0.00 0.00 0.00 1.85
3013 4718 6.070309 ACTGCTCTCTGAAGATGGAATAAAGT 60.070 38.462 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.786937 TGCACAGTTTTGGGACCAAT 58.213 45.000 4.36 0.00 35.70 3.16
23 24 1.117994 TTGCATGCACAGTTTTGGGA 58.882 45.000 22.58 0.00 0.00 4.37
33 34 2.991190 CACTTCTGGAAATTGCATGCAC 59.009 45.455 22.58 8.87 0.00 4.57
35 36 3.308438 ACACTTCTGGAAATTGCATGC 57.692 42.857 11.82 11.82 0.00 4.06
39 40 6.273071 ACAAACTAACACTTCTGGAAATTGC 58.727 36.000 0.00 0.00 0.00 3.56
40 41 7.435192 GGAACAAACTAACACTTCTGGAAATTG 59.565 37.037 0.00 0.00 0.00 2.32
49 50 4.812626 TCGAAGGGAACAAACTAACACTTC 59.187 41.667 0.00 0.00 0.00 3.01
124 125 2.022902 CACGGAGATCGGTCGACG 59.977 66.667 9.92 12.41 44.45 5.12
334 335 2.128771 TTTACTGCATTGGGAGAGCC 57.871 50.000 0.00 0.00 36.18 4.70
362 363 7.544566 TCCGTCTATCTTAAACTTTACTGCAAG 59.455 37.037 0.00 0.00 42.29 4.01
363 364 7.330208 GTCCGTCTATCTTAAACTTTACTGCAA 59.670 37.037 0.00 0.00 0.00 4.08
364 365 6.810182 GTCCGTCTATCTTAAACTTTACTGCA 59.190 38.462 0.00 0.00 0.00 4.41
365 366 6.255237 GGTCCGTCTATCTTAAACTTTACTGC 59.745 42.308 0.00 0.00 0.00 4.40
366 367 7.318141 TGGTCCGTCTATCTTAAACTTTACTG 58.682 38.462 0.00 0.00 0.00 2.74
367 368 7.472334 TGGTCCGTCTATCTTAAACTTTACT 57.528 36.000 0.00 0.00 0.00 2.24
368 369 7.763071 ACATGGTCCGTCTATCTTAAACTTTAC 59.237 37.037 0.00 0.00 0.00 2.01
369 370 7.844009 ACATGGTCCGTCTATCTTAAACTTTA 58.156 34.615 0.00 0.00 0.00 1.85
370 371 6.708285 ACATGGTCCGTCTATCTTAAACTTT 58.292 36.000 0.00 0.00 0.00 2.66
371 372 6.295719 ACATGGTCCGTCTATCTTAAACTT 57.704 37.500 0.00 0.00 0.00 2.66
372 373 5.934402 ACATGGTCCGTCTATCTTAAACT 57.066 39.130 0.00 0.00 0.00 2.66
373 374 8.483307 TTTAACATGGTCCGTCTATCTTAAAC 57.517 34.615 0.00 0.00 0.00 2.01
374 375 9.675464 ATTTTAACATGGTCCGTCTATCTTAAA 57.325 29.630 0.00 0.00 0.00 1.52
375 376 9.675464 AATTTTAACATGGTCCGTCTATCTTAA 57.325 29.630 0.00 0.00 0.00 1.85
377 378 9.326413 CTAATTTTAACATGGTCCGTCTATCTT 57.674 33.333 0.00 0.00 0.00 2.40
378 379 8.483758 ACTAATTTTAACATGGTCCGTCTATCT 58.516 33.333 0.00 0.00 0.00 1.98
379 380 8.548721 CACTAATTTTAACATGGTCCGTCTATC 58.451 37.037 0.00 0.00 0.00 2.08
380 381 8.044908 ACACTAATTTTAACATGGTCCGTCTAT 58.955 33.333 0.00 0.00 0.00 1.98
381 382 7.388437 ACACTAATTTTAACATGGTCCGTCTA 58.612 34.615 0.00 0.00 0.00 2.59
382 383 6.235664 ACACTAATTTTAACATGGTCCGTCT 58.764 36.000 0.00 0.00 0.00 4.18
383 384 6.490566 ACACTAATTTTAACATGGTCCGTC 57.509 37.500 0.00 0.00 0.00 4.79
384 385 7.982761 TTACACTAATTTTAACATGGTCCGT 57.017 32.000 0.00 0.00 0.00 4.69
385 386 9.680315 TTTTTACACTAATTTTAACATGGTCCG 57.320 29.630 0.00 0.00 0.00 4.79
408 409 7.042590 TGTGACACGAAGTAATACGACATTTTT 60.043 33.333 0.22 0.00 41.61 1.94
414 415 4.795904 GTGTGACACGAAGTAATACGAC 57.204 45.455 0.00 0.00 41.61 4.34
454 2059 7.280356 ACTCATCTACGCCATTAATTTTACCT 58.720 34.615 0.00 0.00 0.00 3.08
495 2109 8.548721 GGTCCGTCTATATTAACTTTTCACATG 58.451 37.037 0.00 0.00 0.00 3.21
516 2131 8.488651 AGTCTAAGTAATTTTAACATGGTCCG 57.511 34.615 0.00 0.00 0.00 4.79
565 2188 6.323225 AGGAATCATTTGAGGGATCATTTGTC 59.677 38.462 0.00 0.00 0.00 3.18
589 2212 2.124695 GGGAAGGCGCCCTTGTAG 60.125 66.667 26.15 0.00 44.82 2.74
643 2266 3.742882 CGCGATCAGTGATTGGTATGAAT 59.257 43.478 19.91 0.00 0.00 2.57
664 2287 1.071605 GCTAAGCACACTGAAGTCCG 58.928 55.000 0.00 0.00 0.00 4.79
665 2288 2.464157 AGCTAAGCACACTGAAGTCC 57.536 50.000 0.00 0.00 0.00 3.85
666 2289 3.056465 ACCTAGCTAAGCACACTGAAGTC 60.056 47.826 0.00 0.00 0.00 3.01
735 2358 3.827625 TGTTTCGTCAACCTTTTGTGTG 58.172 40.909 0.00 0.00 33.97 3.82
860 2501 4.811557 GGATTGGGATTAGTGAAGAGTTCG 59.188 45.833 0.00 0.00 0.00 3.95
862 2503 7.510675 TTAGGATTGGGATTAGTGAAGAGTT 57.489 36.000 0.00 0.00 0.00 3.01
893 2534 4.164294 CGCCGCTTTATATAGTGTCTACC 58.836 47.826 3.53 0.00 0.00 3.18
896 2537 2.609737 GCCGCCGCTTTATATAGTGTCT 60.610 50.000 3.53 0.00 0.00 3.41
920 2561 3.161450 GCCTGTATGCCTCCGGGA 61.161 66.667 0.00 0.00 33.58 5.14
931 2572 4.227300 AGATTGTTACTTGGGATGCCTGTA 59.773 41.667 4.35 5.24 0.00 2.74
939 2580 1.920351 GGGGGAGATTGTTACTTGGGA 59.080 52.381 0.00 0.00 0.00 4.37
940 2581 1.923148 AGGGGGAGATTGTTACTTGGG 59.077 52.381 0.00 0.00 0.00 4.12
941 2582 2.846827 AGAGGGGGAGATTGTTACTTGG 59.153 50.000 0.00 0.00 0.00 3.61
942 2583 3.118223 GGAGAGGGGGAGATTGTTACTTG 60.118 52.174 0.00 0.00 0.00 3.16
947 2588 0.423544 AGGGAGAGGGGGAGATTGTT 59.576 55.000 0.00 0.00 0.00 2.83
952 2593 1.365105 GCTAGAGGGAGAGGGGGAGA 61.365 65.000 0.00 0.00 0.00 3.71
962 2603 3.923648 TGCTAAGTTATGGCTAGAGGGA 58.076 45.455 0.00 0.00 0.00 4.20
972 2613 4.437930 GCTGGAGTTGCTTGCTAAGTTATG 60.438 45.833 0.00 0.00 0.00 1.90
973 2614 3.691609 GCTGGAGTTGCTTGCTAAGTTAT 59.308 43.478 0.00 0.00 0.00 1.89
974 2615 3.074412 GCTGGAGTTGCTTGCTAAGTTA 58.926 45.455 0.00 0.00 0.00 2.24
980 2621 1.963338 GTCGCTGGAGTTGCTTGCT 60.963 57.895 0.00 0.00 0.00 3.91
981 2622 2.558313 GTCGCTGGAGTTGCTTGC 59.442 61.111 0.00 0.00 0.00 4.01
987 2628 2.045926 GCCATGGTCGCTGGAGTT 60.046 61.111 14.67 0.00 35.70 3.01
993 2634 3.474570 GAGGAGGCCATGGTCGCT 61.475 66.667 19.96 5.91 0.00 4.93
996 2637 1.225704 CCTTGAGGAGGCCATGGTC 59.774 63.158 8.79 8.79 39.09 4.02
1054 2695 1.605457 CGTAGACAACAGCAGGAGCAA 60.605 52.381 0.00 0.00 45.49 3.91
1242 2883 1.064946 GGAGTCGATCAGCACGGAG 59.935 63.158 0.00 0.00 0.00 4.63
1268 2909 2.190313 CTGCTGGGCTATTGGCGA 59.810 61.111 0.00 0.00 42.94 5.54
1274 2915 1.127343 GTCCTTCTCTGCTGGGCTAT 58.873 55.000 0.00 0.00 0.00 2.97
1277 2918 2.125350 CGTCCTTCTCTGCTGGGC 60.125 66.667 0.00 0.00 0.00 5.36
1281 2922 4.443266 GGCGCGTCCTTCTCTGCT 62.443 66.667 8.43 0.00 0.00 4.24
1362 3003 1.375523 GGACACCGTGTTAGGGCAG 60.376 63.158 5.45 0.00 35.02 4.85
1365 3006 1.375523 GCAGGACACCGTGTTAGGG 60.376 63.158 5.45 0.00 35.02 3.53
1487 3128 2.095252 GGAAGCTGGTTCGTCTCGC 61.095 63.158 12.87 0.00 35.80 5.03
1494 3135 2.035783 GGTGGGGGAAGCTGGTTC 59.964 66.667 10.99 10.99 0.00 3.62
1572 3213 2.831366 GCCGGAGAGCACGACGATA 61.831 63.158 5.05 0.00 0.00 2.92
1648 3289 4.493049 GGGGTTATTGGCGCCGGA 62.493 66.667 23.90 13.97 0.00 5.14
1848 3489 2.032071 CTGGTGGTCGGGTGTTCC 59.968 66.667 0.00 0.00 0.00 3.62
1923 3564 1.811266 CTTGACCATGGACTCGGCG 60.811 63.158 21.47 0.00 0.00 6.46
2039 3680 2.367030 TAACCATGCATGCACTTTGC 57.633 45.000 25.37 3.77 45.29 3.68
2040 3681 3.916761 AGTTAACCATGCATGCACTTTG 58.083 40.909 25.37 17.65 0.00 2.77
2041 3682 3.366273 CGAGTTAACCATGCATGCACTTT 60.366 43.478 25.37 17.89 0.00 2.66
2042 3683 2.162208 CGAGTTAACCATGCATGCACTT 59.838 45.455 25.37 16.51 0.00 3.16
2043 3684 1.739466 CGAGTTAACCATGCATGCACT 59.261 47.619 25.37 13.80 0.00 4.40
2044 3685 1.202177 CCGAGTTAACCATGCATGCAC 60.202 52.381 25.37 8.45 0.00 4.57
2045 3686 1.093972 CCGAGTTAACCATGCATGCA 58.906 50.000 25.04 25.04 0.00 3.96
2046 3687 1.094785 ACCGAGTTAACCATGCATGC 58.905 50.000 21.69 11.82 0.00 4.06
2047 3688 3.531538 AGTACCGAGTTAACCATGCATG 58.468 45.455 20.19 20.19 0.00 4.06
2048 3689 3.906720 AGTACCGAGTTAACCATGCAT 57.093 42.857 0.88 0.00 0.00 3.96
2064 3746 4.889832 AGCAAGCAAGCAATCATAGTAC 57.110 40.909 3.19 0.00 36.85 2.73
2069 3751 3.887621 ATCAAGCAAGCAAGCAATCAT 57.112 38.095 3.19 0.00 36.85 2.45
2087 3769 9.494479 CGATTATATGTATGAACCAATGCAATC 57.506 33.333 0.00 0.00 0.00 2.67
2132 3818 7.646446 AATAAGTGCGCGTAAATATATGACA 57.354 32.000 8.43 0.00 0.00 3.58
2135 3821 9.594038 AAAGAAATAAGTGCGCGTAAATATATG 57.406 29.630 8.43 0.00 0.00 1.78
2146 3832 4.728608 CACCGATAAAAGAAATAAGTGCGC 59.271 41.667 0.00 0.00 0.00 6.09
2208 3897 4.575885 ACAAGAAATTAAGCGGCACTCTA 58.424 39.130 1.45 0.00 0.00 2.43
2212 3901 5.651172 AAAAACAAGAAATTAAGCGGCAC 57.349 34.783 1.45 0.00 0.00 5.01
2254 3943 6.587206 TGCCAATACATGATGAACTGAAAA 57.413 33.333 0.00 0.00 0.00 2.29
2255 3944 6.377712 TGATGCCAATACATGATGAACTGAAA 59.622 34.615 0.00 0.00 0.00 2.69
2288 3977 9.053135 TGTTTATTAATTTCGTTGCATCGTTAC 57.947 29.630 16.21 0.00 0.00 2.50
2356 4045 2.427506 ACAAGTTCCTGCGAAGGATTC 58.572 47.619 14.62 9.98 43.09 2.52
2357 4046 2.568623 ACAAGTTCCTGCGAAGGATT 57.431 45.000 14.62 2.03 37.87 3.01
2358 4047 3.695830 TTACAAGTTCCTGCGAAGGAT 57.304 42.857 14.62 0.00 37.87 3.24
2359 4048 3.695830 ATTACAAGTTCCTGCGAAGGA 57.304 42.857 8.55 8.55 35.93 3.36
2400 4089 0.690192 TCCAGCGATTGTTGGGAGAA 59.310 50.000 15.31 0.00 45.80 2.87
2401 4090 0.036388 GTCCAGCGATTGTTGGGAGA 60.036 55.000 15.31 0.00 45.80 3.71
2402 4091 0.036010 AGTCCAGCGATTGTTGGGAG 60.036 55.000 15.31 0.00 45.80 4.30
2403 4092 0.400213 AAGTCCAGCGATTGTTGGGA 59.600 50.000 15.31 1.04 45.80 4.37
2404 4093 0.523072 CAAGTCCAGCGATTGTTGGG 59.477 55.000 15.31 0.00 45.80 4.12
2406 4095 0.523072 CCCAAGTCCAGCGATTGTTG 59.477 55.000 0.00 0.00 0.00 3.33
2407 4096 1.244019 GCCCAAGTCCAGCGATTGTT 61.244 55.000 0.00 0.00 0.00 2.83
2409 4098 1.377725 AGCCCAAGTCCAGCGATTG 60.378 57.895 0.00 0.00 0.00 2.67
2411 4100 2.270205 CAGCCCAAGTCCAGCGAT 59.730 61.111 0.00 0.00 0.00 4.58
2412 4101 4.704833 GCAGCCCAAGTCCAGCGA 62.705 66.667 0.00 0.00 0.00 4.93
2414 4103 2.362120 ATGCAGCCCAAGTCCAGC 60.362 61.111 0.00 0.00 0.00 4.85
2415 4104 0.323178 AAGATGCAGCCCAAGTCCAG 60.323 55.000 0.00 0.00 0.00 3.86
2456 4157 2.249309 ATACCAACGAAGAGGGGAGT 57.751 50.000 0.00 0.00 0.00 3.85
2468 4169 5.653507 TGATACCGGCGATAATATACCAAC 58.346 41.667 9.30 0.00 0.00 3.77
2470 4171 5.185442 TGTTGATACCGGCGATAATATACCA 59.815 40.000 9.30 0.00 0.00 3.25
2474 4175 4.171005 CGTGTTGATACCGGCGATAATAT 58.829 43.478 9.30 0.06 0.00 1.28
2481 4182 2.888534 CCCGTGTTGATACCGGCG 60.889 66.667 0.00 0.00 37.02 6.46
2495 4196 2.745281 ACAAATGGTCGTTCATAACCCG 59.255 45.455 0.00 0.00 34.47 5.28
2500 4201 9.275398 ACTAAAGTTTACAAATGGTCGTTCATA 57.725 29.630 0.00 0.00 0.00 2.15
2530 4234 8.994429 TGTTTTAGAAAGCACAAATGAAGAAA 57.006 26.923 0.00 0.00 0.00 2.52
2533 4237 7.339953 GCTTGTTTTAGAAAGCACAAATGAAG 58.660 34.615 2.66 0.00 46.45 3.02
2543 4248 5.458015 ACATAACGGCTTGTTTTAGAAAGC 58.542 37.500 0.39 0.00 46.48 3.51
2546 4251 7.028926 TGAAACATAACGGCTTGTTTTAGAA 57.971 32.000 11.47 0.15 43.95 2.10
2549 4254 7.653647 AGATTGAAACATAACGGCTTGTTTTA 58.346 30.769 11.47 6.54 43.95 1.52
2551 4256 6.084326 AGATTGAAACATAACGGCTTGTTT 57.916 33.333 10.40 10.40 45.93 2.83
2560 4265 3.612423 GGCGGCAAAGATTGAAACATAAC 59.388 43.478 3.07 0.00 0.00 1.89
2565 4270 2.061028 CTTGGCGGCAAAGATTGAAAC 58.939 47.619 25.45 0.00 0.00 2.78
2566 4271 1.686052 ACTTGGCGGCAAAGATTGAAA 59.314 42.857 25.45 0.00 0.00 2.69
2570 4275 0.251341 AGGACTTGGCGGCAAAGATT 60.251 50.000 25.45 9.97 0.00 2.40
2593 4298 9.853177 CATTTCTAAGTAAAGGATATCTGGGTT 57.147 33.333 2.05 0.00 0.00 4.11
2609 4314 9.753674 TTCTGTGATAAAATCCCATTTCTAAGT 57.246 29.630 0.00 0.00 0.00 2.24
2612 4317 8.673711 CGTTTCTGTGATAAAATCCCATTTCTA 58.326 33.333 0.00 0.00 0.00 2.10
2613 4318 7.362920 CCGTTTCTGTGATAAAATCCCATTTCT 60.363 37.037 0.00 0.00 0.00 2.52
2614 4319 6.751888 CCGTTTCTGTGATAAAATCCCATTTC 59.248 38.462 0.00 0.00 0.00 2.17
2615 4320 6.630071 CCGTTTCTGTGATAAAATCCCATTT 58.370 36.000 0.00 0.00 0.00 2.32
2616 4321 5.394115 GCCGTTTCTGTGATAAAATCCCATT 60.394 40.000 0.00 0.00 0.00 3.16
2617 4322 4.097892 GCCGTTTCTGTGATAAAATCCCAT 59.902 41.667 0.00 0.00 0.00 4.00
2618 4323 3.442273 GCCGTTTCTGTGATAAAATCCCA 59.558 43.478 0.00 0.00 0.00 4.37
2619 4324 3.442273 TGCCGTTTCTGTGATAAAATCCC 59.558 43.478 0.00 0.00 0.00 3.85
2620 4325 4.695217 TGCCGTTTCTGTGATAAAATCC 57.305 40.909 0.00 0.00 0.00 3.01
2621 4326 5.342259 GTGTTGCCGTTTCTGTGATAAAATC 59.658 40.000 0.00 0.00 0.00 2.17
2622 4327 5.219633 GTGTTGCCGTTTCTGTGATAAAAT 58.780 37.500 0.00 0.00 0.00 1.82
2623 4328 4.498345 GGTGTTGCCGTTTCTGTGATAAAA 60.498 41.667 0.00 0.00 0.00 1.52
2624 4329 3.003897 GGTGTTGCCGTTTCTGTGATAAA 59.996 43.478 0.00 0.00 0.00 1.40
2625 4330 2.550606 GGTGTTGCCGTTTCTGTGATAA 59.449 45.455 0.00 0.00 0.00 1.75
2626 4331 2.147958 GGTGTTGCCGTTTCTGTGATA 58.852 47.619 0.00 0.00 0.00 2.15
2627 4332 0.951558 GGTGTTGCCGTTTCTGTGAT 59.048 50.000 0.00 0.00 0.00 3.06
2628 4333 0.107410 AGGTGTTGCCGTTTCTGTGA 60.107 50.000 0.00 0.00 43.70 3.58
2629 4334 1.588674 TAGGTGTTGCCGTTTCTGTG 58.411 50.000 0.00 0.00 43.70 3.66
2630 4335 2.561478 ATAGGTGTTGCCGTTTCTGT 57.439 45.000 0.00 0.00 43.70 3.41
2631 4336 2.676342 GGTATAGGTGTTGCCGTTTCTG 59.324 50.000 0.00 0.00 43.70 3.02
2632 4337 2.303600 TGGTATAGGTGTTGCCGTTTCT 59.696 45.455 0.00 0.00 43.70 2.52
2633 4338 2.702261 TGGTATAGGTGTTGCCGTTTC 58.298 47.619 0.00 0.00 43.70 2.78
2634 4339 2.863132 TGGTATAGGTGTTGCCGTTT 57.137 45.000 0.00 0.00 43.70 3.60
2635 4340 2.863132 TTGGTATAGGTGTTGCCGTT 57.137 45.000 0.00 0.00 43.70 4.44
2636 4341 2.303600 TCTTTGGTATAGGTGTTGCCGT 59.696 45.455 0.00 0.00 43.70 5.68
2637 4342 2.980568 TCTTTGGTATAGGTGTTGCCG 58.019 47.619 0.00 0.00 43.70 5.69
2638 4343 3.560068 CGATCTTTGGTATAGGTGTTGCC 59.440 47.826 0.00 0.00 37.58 4.52
2639 4344 4.439057 TCGATCTTTGGTATAGGTGTTGC 58.561 43.478 0.00 0.00 0.00 4.17
2640 4345 6.645415 GGTATCGATCTTTGGTATAGGTGTTG 59.355 42.308 0.00 0.00 0.00 3.33
2641 4346 6.325545 TGGTATCGATCTTTGGTATAGGTGTT 59.674 38.462 0.00 0.00 0.00 3.32
2642 4347 5.836898 TGGTATCGATCTTTGGTATAGGTGT 59.163 40.000 0.00 0.00 0.00 4.16
2643 4348 6.340962 TGGTATCGATCTTTGGTATAGGTG 57.659 41.667 0.00 0.00 0.00 4.00
2644 4349 6.553852 ACTTGGTATCGATCTTTGGTATAGGT 59.446 38.462 0.00 0.00 0.00 3.08
2645 4350 6.994221 ACTTGGTATCGATCTTTGGTATAGG 58.006 40.000 0.00 0.00 0.00 2.57
2646 4351 9.627395 CTTACTTGGTATCGATCTTTGGTATAG 57.373 37.037 0.00 0.12 0.00 1.31
2647 4352 9.139734 ACTTACTTGGTATCGATCTTTGGTATA 57.860 33.333 0.00 0.00 0.00 1.47
2648 4353 8.019656 ACTTACTTGGTATCGATCTTTGGTAT 57.980 34.615 0.00 0.00 0.00 2.73
2649 4354 7.414222 ACTTACTTGGTATCGATCTTTGGTA 57.586 36.000 0.00 0.00 0.00 3.25
2650 4355 6.295719 ACTTACTTGGTATCGATCTTTGGT 57.704 37.500 0.00 0.00 0.00 3.67
2651 4356 6.594159 ACAACTTACTTGGTATCGATCTTTGG 59.406 38.462 0.00 0.00 33.66 3.28
2652 4357 7.596749 ACAACTTACTTGGTATCGATCTTTG 57.403 36.000 0.00 0.00 33.66 2.77
2653 4358 7.333672 GGAACAACTTACTTGGTATCGATCTTT 59.666 37.037 0.00 0.00 33.66 2.52
2654 4359 6.817140 GGAACAACTTACTTGGTATCGATCTT 59.183 38.462 0.00 0.00 33.66 2.40
2655 4360 6.338937 GGAACAACTTACTTGGTATCGATCT 58.661 40.000 0.00 0.00 33.66 2.75
2656 4361 5.522824 GGGAACAACTTACTTGGTATCGATC 59.477 44.000 0.00 0.00 33.66 3.69
2657 4362 5.046159 TGGGAACAACTTACTTGGTATCGAT 60.046 40.000 2.16 2.16 37.44 3.59
2658 4363 4.283978 TGGGAACAACTTACTTGGTATCGA 59.716 41.667 0.00 0.00 37.44 3.59
2659 4364 4.390909 GTGGGAACAACTTACTTGGTATCG 59.609 45.833 0.00 0.00 46.06 2.92
2660 4365 5.557866 AGTGGGAACAACTTACTTGGTATC 58.442 41.667 0.00 0.00 46.06 2.24
2661 4366 5.578157 AGTGGGAACAACTTACTTGGTAT 57.422 39.130 0.00 0.00 46.06 2.73
2662 4367 6.497624 TTAGTGGGAACAACTTACTTGGTA 57.502 37.500 0.00 0.00 46.06 3.25
2663 4368 3.945640 AGTGGGAACAACTTACTTGGT 57.054 42.857 0.00 0.00 46.06 3.67
2664 4369 6.500910 GTTTTAGTGGGAACAACTTACTTGG 58.499 40.000 0.00 0.00 46.06 3.61
2665 4370 6.037391 TCGTTTTAGTGGGAACAACTTACTTG 59.963 38.462 0.00 0.00 46.06 3.16
2666 4371 6.037500 GTCGTTTTAGTGGGAACAACTTACTT 59.962 38.462 0.00 0.00 46.06 2.24
2667 4372 5.525012 GTCGTTTTAGTGGGAACAACTTACT 59.475 40.000 0.00 0.00 46.06 2.24
2668 4373 5.556947 CGTCGTTTTAGTGGGAACAACTTAC 60.557 44.000 0.00 0.00 46.06 2.34
2669 4374 4.507388 CGTCGTTTTAGTGGGAACAACTTA 59.493 41.667 0.00 0.00 46.06 2.24
2670 4375 3.310501 CGTCGTTTTAGTGGGAACAACTT 59.689 43.478 0.00 0.00 46.06 2.66
2671 4376 2.867975 CGTCGTTTTAGTGGGAACAACT 59.132 45.455 0.00 0.00 46.06 3.16
2672 4377 2.865551 TCGTCGTTTTAGTGGGAACAAC 59.134 45.455 0.00 0.00 46.06 3.32
2673 4378 3.125316 CTCGTCGTTTTAGTGGGAACAA 58.875 45.455 0.00 0.00 46.06 2.83
2674 4379 2.101249 ACTCGTCGTTTTAGTGGGAACA 59.899 45.455 0.00 0.00 38.70 3.18
2675 4380 2.747436 ACTCGTCGTTTTAGTGGGAAC 58.253 47.619 0.00 0.00 0.00 3.62
2676 4381 4.582701 TTACTCGTCGTTTTAGTGGGAA 57.417 40.909 0.00 0.00 0.00 3.97
2677 4382 4.202101 TGTTTACTCGTCGTTTTAGTGGGA 60.202 41.667 0.00 0.00 0.00 4.37
2678 4383 4.050553 TGTTTACTCGTCGTTTTAGTGGG 58.949 43.478 0.00 0.00 0.00 4.61
2679 4384 5.834239 ATGTTTACTCGTCGTTTTAGTGG 57.166 39.130 0.00 0.00 0.00 4.00
2680 4385 6.642917 ACAATGTTTACTCGTCGTTTTAGTG 58.357 36.000 0.00 0.00 0.00 2.74
2681 4386 6.833342 ACAATGTTTACTCGTCGTTTTAGT 57.167 33.333 0.00 0.00 0.00 2.24
2682 4387 8.060090 AGAAACAATGTTTACTCGTCGTTTTAG 58.940 33.333 11.71 0.00 0.00 1.85
2683 4388 7.908230 AGAAACAATGTTTACTCGTCGTTTTA 58.092 30.769 11.71 0.00 0.00 1.52
2684 4389 6.778108 AGAAACAATGTTTACTCGTCGTTTT 58.222 32.000 11.71 0.00 0.00 2.43
2685 4390 6.354039 AGAAACAATGTTTACTCGTCGTTT 57.646 33.333 11.71 0.00 0.00 3.60
2686 4391 5.978934 AGAAACAATGTTTACTCGTCGTT 57.021 34.783 11.71 0.00 0.00 3.85
2687 4392 5.521010 TGAAGAAACAATGTTTACTCGTCGT 59.479 36.000 11.71 0.00 0.00 4.34
2688 4393 5.839239 GTGAAGAAACAATGTTTACTCGTCG 59.161 40.000 11.71 0.00 0.00 5.12
2689 4394 5.839239 CGTGAAGAAACAATGTTTACTCGTC 59.161 40.000 11.71 8.09 0.00 4.20
2690 4395 5.292589 ACGTGAAGAAACAATGTTTACTCGT 59.707 36.000 21.41 21.41 0.00 4.18
2691 4396 5.615581 CACGTGAAGAAACAATGTTTACTCG 59.384 40.000 10.90 17.69 0.00 4.18
2692 4397 6.711579 TCACGTGAAGAAACAATGTTTACTC 58.288 36.000 17.62 11.20 0.00 2.59
2693 4398 6.671614 TCACGTGAAGAAACAATGTTTACT 57.328 33.333 17.62 7.97 0.00 2.24
2694 4399 7.694784 TCTTTCACGTGAAGAAACAATGTTTAC 59.305 33.333 28.21 5.47 35.21 2.01
2695 4400 7.694784 GTCTTTCACGTGAAGAAACAATGTTTA 59.305 33.333 28.21 10.20 35.21 2.01
2696 4401 6.526674 GTCTTTCACGTGAAGAAACAATGTTT 59.473 34.615 28.21 11.55 35.21 2.83
2697 4402 6.027749 GTCTTTCACGTGAAGAAACAATGTT 58.972 36.000 28.21 0.00 35.21 2.71
2698 4403 5.123186 TGTCTTTCACGTGAAGAAACAATGT 59.877 36.000 28.21 0.00 35.21 2.71
2699 4404 5.568482 TGTCTTTCACGTGAAGAAACAATG 58.432 37.500 28.21 10.29 35.21 2.82
2700 4405 5.220854 CCTGTCTTTCACGTGAAGAAACAAT 60.221 40.000 28.21 0.00 35.21 2.71
2701 4406 4.094294 CCTGTCTTTCACGTGAAGAAACAA 59.906 41.667 28.21 13.64 35.21 2.83
2702 4407 3.621268 CCTGTCTTTCACGTGAAGAAACA 59.379 43.478 28.21 27.28 35.21 2.83
2703 4408 3.621715 ACCTGTCTTTCACGTGAAGAAAC 59.378 43.478 28.21 24.86 35.21 2.78
2704 4409 3.621268 CACCTGTCTTTCACGTGAAGAAA 59.379 43.478 28.21 20.75 35.93 2.52
2705 4410 3.194861 CACCTGTCTTTCACGTGAAGAA 58.805 45.455 28.21 18.53 35.93 2.52
2706 4411 2.821546 CACCTGTCTTTCACGTGAAGA 58.178 47.619 28.21 23.37 35.93 2.87
2707 4412 1.261619 GCACCTGTCTTTCACGTGAAG 59.738 52.381 28.21 21.75 35.93 3.02
2708 4413 1.134521 AGCACCTGTCTTTCACGTGAA 60.135 47.619 26.53 26.53 35.93 3.18
2709 4414 0.464036 AGCACCTGTCTTTCACGTGA 59.536 50.000 15.76 15.76 35.93 4.35
2710 4415 0.861837 GAGCACCTGTCTTTCACGTG 59.138 55.000 9.94 9.94 36.59 4.49
2711 4416 0.249911 GGAGCACCTGTCTTTCACGT 60.250 55.000 0.00 0.00 0.00 4.49
2712 4417 0.034059 AGGAGCACCTGTCTTTCACG 59.966 55.000 0.22 0.00 45.92 4.35
2723 4428 5.918608 TCTTTTCACATCTATAGGAGCACC 58.081 41.667 0.00 0.00 0.00 5.01
2724 4429 7.849804 TTTCTTTTCACATCTATAGGAGCAC 57.150 36.000 0.00 0.00 0.00 4.40
2725 4430 9.466497 AATTTTCTTTTCACATCTATAGGAGCA 57.534 29.630 0.00 0.00 0.00 4.26
2736 4441 9.979578 TGTTGTATGCTAATTTTCTTTTCACAT 57.020 25.926 0.00 0.00 0.00 3.21
2737 4442 9.243637 GTGTTGTATGCTAATTTTCTTTTCACA 57.756 29.630 0.00 0.00 0.00 3.58
2738 4443 9.463443 AGTGTTGTATGCTAATTTTCTTTTCAC 57.537 29.630 0.00 0.00 0.00 3.18
2742 4447 9.180678 CGAAAGTGTTGTATGCTAATTTTCTTT 57.819 29.630 0.00 0.00 0.00 2.52
2743 4448 8.564574 TCGAAAGTGTTGTATGCTAATTTTCTT 58.435 29.630 0.00 0.00 0.00 2.52
2744 4449 8.094798 TCGAAAGTGTTGTATGCTAATTTTCT 57.905 30.769 0.00 0.00 0.00 2.52
2745 4450 8.722342 TTCGAAAGTGTTGTATGCTAATTTTC 57.278 30.769 0.00 0.00 0.00 2.29
2746 4451 8.564574 TCTTCGAAAGTGTTGTATGCTAATTTT 58.435 29.630 0.00 0.00 0.00 1.82
2747 4452 8.094798 TCTTCGAAAGTGTTGTATGCTAATTT 57.905 30.769 0.00 0.00 0.00 1.82
2748 4453 7.667043 TCTTCGAAAGTGTTGTATGCTAATT 57.333 32.000 0.00 0.00 0.00 1.40
2749 4454 7.011482 GGATCTTCGAAAGTGTTGTATGCTAAT 59.989 37.037 0.00 0.00 0.00 1.73
2750 4455 6.312918 GGATCTTCGAAAGTGTTGTATGCTAA 59.687 38.462 0.00 0.00 0.00 3.09
2751 4456 5.810587 GGATCTTCGAAAGTGTTGTATGCTA 59.189 40.000 0.00 0.00 0.00 3.49
2752 4457 4.631813 GGATCTTCGAAAGTGTTGTATGCT 59.368 41.667 0.00 0.00 0.00 3.79
2753 4458 4.391830 TGGATCTTCGAAAGTGTTGTATGC 59.608 41.667 0.00 0.00 0.00 3.14
2754 4459 5.639506 ACTGGATCTTCGAAAGTGTTGTATG 59.360 40.000 0.00 0.00 0.00 2.39
2755 4460 5.794894 ACTGGATCTTCGAAAGTGTTGTAT 58.205 37.500 0.00 0.00 0.00 2.29
2756 4461 5.209818 ACTGGATCTTCGAAAGTGTTGTA 57.790 39.130 0.00 0.00 0.00 2.41
2757 4462 4.073293 ACTGGATCTTCGAAAGTGTTGT 57.927 40.909 0.00 0.00 0.00 3.32
2758 4463 4.511454 TCAACTGGATCTTCGAAAGTGTTG 59.489 41.667 0.00 9.01 35.15 3.33
2759 4464 4.511826 GTCAACTGGATCTTCGAAAGTGTT 59.488 41.667 0.00 0.00 0.00 3.32
2760 4465 4.058817 GTCAACTGGATCTTCGAAAGTGT 58.941 43.478 0.00 0.00 0.00 3.55
2761 4466 4.151335 CAGTCAACTGGATCTTCGAAAGTG 59.849 45.833 0.00 0.00 40.20 3.16
2762 4467 4.039245 TCAGTCAACTGGATCTTCGAAAGT 59.961 41.667 10.13 0.00 43.91 2.66
2763 4468 4.560128 TCAGTCAACTGGATCTTCGAAAG 58.440 43.478 10.13 0.00 43.91 2.62
2764 4469 4.560128 CTCAGTCAACTGGATCTTCGAAA 58.440 43.478 10.13 0.00 43.91 3.46
2765 4470 3.056536 CCTCAGTCAACTGGATCTTCGAA 60.057 47.826 10.13 0.00 43.91 3.71
2766 4471 2.493675 CCTCAGTCAACTGGATCTTCGA 59.506 50.000 10.13 0.00 43.91 3.71
2767 4472 2.493675 TCCTCAGTCAACTGGATCTTCG 59.506 50.000 10.13 0.00 43.91 3.79
2768 4473 3.259374 TGTCCTCAGTCAACTGGATCTTC 59.741 47.826 10.13 0.00 43.91 2.87
2769 4474 3.242867 TGTCCTCAGTCAACTGGATCTT 58.757 45.455 10.13 0.00 43.91 2.40
2770 4475 2.894731 TGTCCTCAGTCAACTGGATCT 58.105 47.619 10.13 0.00 43.91 2.75
2771 4476 3.055530 ACATGTCCTCAGTCAACTGGATC 60.056 47.826 10.13 0.00 43.91 3.36
2772 4477 2.909006 ACATGTCCTCAGTCAACTGGAT 59.091 45.455 10.13 0.00 43.91 3.41
2773 4478 2.329267 ACATGTCCTCAGTCAACTGGA 58.671 47.619 10.13 0.00 43.91 3.86
2774 4479 2.847327 ACATGTCCTCAGTCAACTGG 57.153 50.000 10.13 1.74 43.91 4.00
2775 4480 6.808008 ATAAAACATGTCCTCAGTCAACTG 57.192 37.500 0.00 3.69 45.08 3.16
2776 4481 7.721399 AGAAATAAAACATGTCCTCAGTCAACT 59.279 33.333 0.00 0.00 0.00 3.16
2777 4482 7.875971 AGAAATAAAACATGTCCTCAGTCAAC 58.124 34.615 0.00 0.00 0.00 3.18
2778 4483 8.463930 AAGAAATAAAACATGTCCTCAGTCAA 57.536 30.769 0.00 0.00 0.00 3.18
2779 4484 7.174946 GGAAGAAATAAAACATGTCCTCAGTCA 59.825 37.037 0.00 0.00 0.00 3.41
2780 4485 7.174946 TGGAAGAAATAAAACATGTCCTCAGTC 59.825 37.037 0.00 0.00 0.00 3.51
2781 4486 7.004086 TGGAAGAAATAAAACATGTCCTCAGT 58.996 34.615 0.00 0.00 0.00 3.41
2782 4487 7.175641 ACTGGAAGAAATAAAACATGTCCTCAG 59.824 37.037 0.00 0.00 37.43 3.35
2783 4488 7.004086 ACTGGAAGAAATAAAACATGTCCTCA 58.996 34.615 0.00 0.00 37.43 3.86
2784 4489 7.308435 CACTGGAAGAAATAAAACATGTCCTC 58.692 38.462 0.00 0.00 37.43 3.71
2785 4490 6.209391 CCACTGGAAGAAATAAAACATGTCCT 59.791 38.462 0.00 0.00 37.43 3.85
2786 4491 6.208599 TCCACTGGAAGAAATAAAACATGTCC 59.791 38.462 0.00 0.00 37.43 4.02
2787 4492 7.214467 TCCACTGGAAGAAATAAAACATGTC 57.786 36.000 0.00 0.00 37.43 3.06
2788 4493 7.595819 TTCCACTGGAAGAAATAAAACATGT 57.404 32.000 6.39 0.00 36.71 3.21
2802 4507 1.073923 GCCCTCTTTCTTCCACTGGAA 59.926 52.381 10.23 10.23 39.66 3.53
2803 4508 0.693049 GCCCTCTTTCTTCCACTGGA 59.307 55.000 0.00 0.00 0.00 3.86
2804 4509 0.322906 GGCCCTCTTTCTTCCACTGG 60.323 60.000 0.00 0.00 0.00 4.00
2805 4510 0.322906 GGGCCCTCTTTCTTCCACTG 60.323 60.000 17.04 0.00 0.00 3.66
2806 4511 0.476611 AGGGCCCTCTTTCTTCCACT 60.477 55.000 22.28 0.00 0.00 4.00
2807 4512 0.405973 AAGGGCCCTCTTTCTTCCAC 59.594 55.000 28.84 0.00 0.00 4.02
2808 4513 1.158007 AAAGGGCCCTCTTTCTTCCA 58.842 50.000 28.84 0.00 32.01 3.53
2809 4514 1.550327 CAAAGGGCCCTCTTTCTTCC 58.450 55.000 28.84 0.00 35.04 3.46
2810 4515 1.550327 CCAAAGGGCCCTCTTTCTTC 58.450 55.000 28.84 0.00 35.04 2.87
2811 4516 3.774144 CCAAAGGGCCCTCTTTCTT 57.226 52.632 28.84 13.13 35.04 2.52
2822 4527 1.676014 CGAGGAACACTAGCCAAAGGG 60.676 57.143 0.00 0.00 37.18 3.95
2823 4528 1.676014 CCGAGGAACACTAGCCAAAGG 60.676 57.143 0.00 0.00 0.00 3.11
2824 4529 1.676014 CCCGAGGAACACTAGCCAAAG 60.676 57.143 0.00 0.00 0.00 2.77
2825 4530 0.323629 CCCGAGGAACACTAGCCAAA 59.676 55.000 0.00 0.00 0.00 3.28
2826 4531 1.980052 CCCGAGGAACACTAGCCAA 59.020 57.895 0.00 0.00 0.00 4.52
2827 4532 2.656069 GCCCGAGGAACACTAGCCA 61.656 63.158 0.00 0.00 0.00 4.75
2828 4533 1.900545 AAGCCCGAGGAACACTAGCC 61.901 60.000 0.00 0.00 0.00 3.93
2829 4534 0.460459 GAAGCCCGAGGAACACTAGC 60.460 60.000 0.00 0.00 0.00 3.42
2830 4535 0.175989 GGAAGCCCGAGGAACACTAG 59.824 60.000 0.00 0.00 0.00 2.57
2831 4536 1.262640 GGGAAGCCCGAGGAACACTA 61.263 60.000 0.00 0.00 32.13 2.74
2832 4537 2.593956 GGGAAGCCCGAGGAACACT 61.594 63.158 0.00 0.00 32.13 3.55
2833 4538 2.046217 GGGAAGCCCGAGGAACAC 60.046 66.667 0.00 0.00 32.13 3.32
2842 4547 3.961414 TGGACCAACGGGAAGCCC 61.961 66.667 0.00 0.00 41.09 5.19
2843 4548 2.671963 GTGGACCAACGGGAAGCC 60.672 66.667 0.00 0.00 38.05 4.35
2844 4549 2.671963 GGTGGACCAACGGGAAGC 60.672 66.667 0.00 0.00 38.05 3.86
2845 4550 1.003718 GAGGTGGACCAACGGGAAG 60.004 63.158 3.22 0.00 38.89 3.46
2846 4551 2.874664 CGAGGTGGACCAACGGGAA 61.875 63.158 3.22 0.00 38.89 3.97
2847 4552 3.307906 CGAGGTGGACCAACGGGA 61.308 66.667 3.22 0.00 38.89 5.14
2848 4553 3.584868 GACGAGGTGGACCAACGGG 62.585 68.421 3.22 2.39 40.40 5.28
2849 4554 2.048503 GACGAGGTGGACCAACGG 60.049 66.667 3.22 2.79 40.40 4.44
2850 4555 0.666577 GAAGACGAGGTGGACCAACG 60.667 60.000 3.22 9.42 41.29 4.10
2851 4556 0.680061 AGAAGACGAGGTGGACCAAC 59.320 55.000 0.00 0.00 38.89 3.77
2852 4557 0.679505 CAGAAGACGAGGTGGACCAA 59.320 55.000 0.00 0.00 38.89 3.67
2853 4558 0.469331 ACAGAAGACGAGGTGGACCA 60.469 55.000 0.00 0.00 38.89 4.02
2854 4559 0.038159 CACAGAAGACGAGGTGGACC 60.038 60.000 0.00 0.00 0.00 4.46
2855 4560 3.498676 CACAGAAGACGAGGTGGAC 57.501 57.895 0.00 0.00 0.00 4.02
2857 4562 4.996976 CCACAGAAGACGAGGTGG 57.003 61.111 0.00 0.00 44.17 4.61
2858 4563 0.962489 AGACCACAGAAGACGAGGTG 59.038 55.000 0.00 0.00 31.57 4.00
2859 4564 1.705873 AAGACCACAGAAGACGAGGT 58.294 50.000 0.00 0.00 34.76 3.85
2860 4565 2.164624 CCTAAGACCACAGAAGACGAGG 59.835 54.545 0.00 0.00 0.00 4.63
2861 4566 2.416162 GCCTAAGACCACAGAAGACGAG 60.416 54.545 0.00 0.00 0.00 4.18
2862 4567 1.544691 GCCTAAGACCACAGAAGACGA 59.455 52.381 0.00 0.00 0.00 4.20
2863 4568 1.404315 GGCCTAAGACCACAGAAGACG 60.404 57.143 0.00 0.00 0.00 4.18
2864 4569 1.623811 TGGCCTAAGACCACAGAAGAC 59.376 52.381 3.32 0.00 30.29 3.01
2865 4570 2.024176 TGGCCTAAGACCACAGAAGA 57.976 50.000 3.32 0.00 30.29 2.87
2866 4571 2.237143 TCATGGCCTAAGACCACAGAAG 59.763 50.000 3.32 0.00 40.82 2.85
2867 4572 2.265367 TCATGGCCTAAGACCACAGAA 58.735 47.619 3.32 0.00 40.82 3.02
2868 4573 1.951209 TCATGGCCTAAGACCACAGA 58.049 50.000 3.32 0.00 40.82 3.41
2869 4574 2.636830 CTTCATGGCCTAAGACCACAG 58.363 52.381 3.32 0.00 40.82 3.66
2870 4575 1.281867 CCTTCATGGCCTAAGACCACA 59.718 52.381 3.32 0.00 40.82 4.17
2871 4576 2.044123 CCTTCATGGCCTAAGACCAC 57.956 55.000 3.32 0.00 40.82 4.16
2882 4587 0.533755 GATCCTCCACGCCTTCATGG 60.534 60.000 0.00 0.00 37.32 3.66
2883 4588 0.533755 GGATCCTCCACGCCTTCATG 60.534 60.000 3.84 0.00 36.28 3.07
2884 4589 0.692419 AGGATCCTCCACGCCTTCAT 60.692 55.000 9.02 0.00 39.61 2.57
2885 4590 1.306141 AGGATCCTCCACGCCTTCA 60.306 57.895 9.02 0.00 39.61 3.02
2886 4591 1.144936 CAGGATCCTCCACGCCTTC 59.855 63.158 12.69 0.00 39.61 3.46
2887 4592 2.370445 CCAGGATCCTCCACGCCTT 61.370 63.158 12.69 0.00 39.61 4.35
2888 4593 2.765807 CCAGGATCCTCCACGCCT 60.766 66.667 12.69 0.00 39.61 5.52
2889 4594 4.554036 GCCAGGATCCTCCACGCC 62.554 72.222 12.69 0.00 39.61 5.68
2890 4595 4.554036 GGCCAGGATCCTCCACGC 62.554 72.222 12.69 11.00 39.61 5.34
2891 4596 3.866582 GGGCCAGGATCCTCCACG 61.867 72.222 12.69 0.00 39.61 4.94
2892 4597 2.003548 AAGGGCCAGGATCCTCCAC 61.004 63.158 12.69 7.23 39.61 4.02
2893 4598 2.002977 CAAGGGCCAGGATCCTCCA 61.003 63.158 12.69 0.00 39.61 3.86
2894 4599 2.922234 CAAGGGCCAGGATCCTCC 59.078 66.667 12.69 11.40 36.58 4.30
2895 4600 2.194326 GCAAGGGCCAGGATCCTC 59.806 66.667 12.69 0.74 32.02 3.71
2918 4623 1.140852 AGCAAGAAAAACAAAGCCCCC 59.859 47.619 0.00 0.00 0.00 5.40
2919 4624 2.620251 AGCAAGAAAAACAAAGCCCC 57.380 45.000 0.00 0.00 0.00 5.80
2920 4625 4.963276 AAAAGCAAGAAAAACAAAGCCC 57.037 36.364 0.00 0.00 0.00 5.19
2921 4626 5.937187 TCAAAAAGCAAGAAAAACAAAGCC 58.063 33.333 0.00 0.00 0.00 4.35
2922 4627 6.602179 ACTCAAAAAGCAAGAAAAACAAAGC 58.398 32.000 0.00 0.00 0.00 3.51
2923 4628 9.449550 AAAACTCAAAAAGCAAGAAAAACAAAG 57.550 25.926 0.00 0.00 0.00 2.77
2924 4629 9.230932 CAAAACTCAAAAAGCAAGAAAAACAAA 57.769 25.926 0.00 0.00 0.00 2.83
2925 4630 8.401709 ACAAAACTCAAAAAGCAAGAAAAACAA 58.598 25.926 0.00 0.00 0.00 2.83
2926 4631 7.924940 ACAAAACTCAAAAAGCAAGAAAAACA 58.075 26.923 0.00 0.00 0.00 2.83
2927 4632 8.781067 AACAAAACTCAAAAAGCAAGAAAAAC 57.219 26.923 0.00 0.00 0.00 2.43
2929 4634 8.716909 CCTAACAAAACTCAAAAAGCAAGAAAA 58.283 29.630 0.00 0.00 0.00 2.29
2930 4635 7.333174 CCCTAACAAAACTCAAAAAGCAAGAAA 59.667 33.333 0.00 0.00 0.00 2.52
2931 4636 6.816140 CCCTAACAAAACTCAAAAAGCAAGAA 59.184 34.615 0.00 0.00 0.00 2.52
2932 4637 6.071051 ACCCTAACAAAACTCAAAAAGCAAGA 60.071 34.615 0.00 0.00 0.00 3.02
2933 4638 6.106003 ACCCTAACAAAACTCAAAAAGCAAG 58.894 36.000 0.00 0.00 0.00 4.01
2934 4639 6.043854 ACCCTAACAAAACTCAAAAAGCAA 57.956 33.333 0.00 0.00 0.00 3.91
2935 4640 5.669164 ACCCTAACAAAACTCAAAAAGCA 57.331 34.783 0.00 0.00 0.00 3.91
2936 4641 6.674519 GCAAACCCTAACAAAACTCAAAAAGC 60.675 38.462 0.00 0.00 0.00 3.51
2937 4642 6.454981 CGCAAACCCTAACAAAACTCAAAAAG 60.455 38.462 0.00 0.00 0.00 2.27
2938 4643 5.348997 CGCAAACCCTAACAAAACTCAAAAA 59.651 36.000 0.00 0.00 0.00 1.94
2939 4644 4.865365 CGCAAACCCTAACAAAACTCAAAA 59.135 37.500 0.00 0.00 0.00 2.44
2940 4645 4.082136 ACGCAAACCCTAACAAAACTCAAA 60.082 37.500 0.00 0.00 0.00 2.69
2941 4646 3.444388 ACGCAAACCCTAACAAAACTCAA 59.556 39.130 0.00 0.00 0.00 3.02
2942 4647 3.018149 ACGCAAACCCTAACAAAACTCA 58.982 40.909 0.00 0.00 0.00 3.41
2943 4648 3.314357 AGACGCAAACCCTAACAAAACTC 59.686 43.478 0.00 0.00 0.00 3.01
2944 4649 3.284617 AGACGCAAACCCTAACAAAACT 58.715 40.909 0.00 0.00 0.00 2.66
2945 4650 3.703286 AGACGCAAACCCTAACAAAAC 57.297 42.857 0.00 0.00 0.00 2.43
2946 4651 3.735514 GCAAGACGCAAACCCTAACAAAA 60.736 43.478 0.00 0.00 41.79 2.44
2947 4652 2.223618 GCAAGACGCAAACCCTAACAAA 60.224 45.455 0.00 0.00 41.79 2.83
2948 4653 1.335496 GCAAGACGCAAACCCTAACAA 59.665 47.619 0.00 0.00 41.79 2.83
2949 4654 0.948678 GCAAGACGCAAACCCTAACA 59.051 50.000 0.00 0.00 41.79 2.41
2950 4655 1.197036 GAGCAAGACGCAAACCCTAAC 59.803 52.381 0.00 0.00 46.13 2.34
2951 4656 1.202710 TGAGCAAGACGCAAACCCTAA 60.203 47.619 0.00 0.00 46.13 2.69
2952 4657 0.394938 TGAGCAAGACGCAAACCCTA 59.605 50.000 0.00 0.00 46.13 3.53
2953 4658 1.148273 TGAGCAAGACGCAAACCCT 59.852 52.632 0.00 0.00 46.13 4.34
2954 4659 1.282875 GTGAGCAAGACGCAAACCC 59.717 57.895 0.00 0.00 46.13 4.11
2955 4660 0.040958 CTGTGAGCAAGACGCAAACC 60.041 55.000 0.00 0.00 46.13 3.27
2956 4661 0.937304 TCTGTGAGCAAGACGCAAAC 59.063 50.000 0.00 0.00 46.13 2.93
2957 4662 1.220529 CTCTGTGAGCAAGACGCAAA 58.779 50.000 0.00 0.00 46.13 3.68
2958 4663 2.904664 CTCTGTGAGCAAGACGCAA 58.095 52.632 0.00 0.00 46.13 4.85
2959 4664 4.661461 CTCTGTGAGCAAGACGCA 57.339 55.556 0.00 0.00 46.13 5.24
2968 4673 4.504916 CCGCCTCGGCTCTGTGAG 62.505 72.222 6.35 0.00 41.17 3.51
2979 4684 4.863925 GAGAGCAGTCGCCGCCTC 62.864 72.222 0.00 0.00 39.83 4.70
2982 4687 3.633094 TTCAGAGAGCAGTCGCCGC 62.633 63.158 0.00 0.00 39.83 6.53
2983 4688 1.515952 CTTCAGAGAGCAGTCGCCG 60.516 63.158 0.00 0.00 39.83 6.46
2984 4689 0.459489 ATCTTCAGAGAGCAGTCGCC 59.541 55.000 0.00 0.00 39.83 5.54
2985 4690 1.558741 CATCTTCAGAGAGCAGTCGC 58.441 55.000 0.00 0.00 34.85 5.19
2986 4691 1.747924 TCCATCTTCAGAGAGCAGTCG 59.252 52.381 0.00 0.00 34.85 4.18
2987 4692 3.883830 TTCCATCTTCAGAGAGCAGTC 57.116 47.619 0.00 0.00 34.85 3.51
2988 4693 5.946942 TTATTCCATCTTCAGAGAGCAGT 57.053 39.130 0.00 0.00 34.85 4.40
2989 4694 6.347696 ACTTTATTCCATCTTCAGAGAGCAG 58.652 40.000 0.00 0.00 34.85 4.24
2990 4695 6.305272 ACTTTATTCCATCTTCAGAGAGCA 57.695 37.500 0.00 0.00 34.85 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.