Multiple sequence alignment - TraesCS2B01G245500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G245500 chr2B 100.000 2588 0 0 1 2588 249462938 249465525 0.000000e+00 4780.0
1 TraesCS2B01G245500 chr2D 92.938 1501 67 12 529 1998 193342353 193343845 0.000000e+00 2148.0
2 TraesCS2B01G245500 chr2D 97.167 353 7 1 2034 2383 193343850 193344202 6.170000e-166 593.0
3 TraesCS2B01G245500 chr2D 87.696 447 45 7 1 444 306255351 306255790 1.780000e-141 512.0
4 TraesCS2B01G245500 chr2D 95.918 196 8 0 2393 2588 193344282 193344477 4.160000e-83 318.0
5 TraesCS2B01G245500 chr2A 91.411 1432 76 26 468 1880 207580065 207581468 0.000000e+00 1919.0
6 TraesCS2B01G245500 chr2A 95.601 341 12 1 2046 2383 207581661 207582001 6.300000e-151 544.0
7 TraesCS2B01G245500 chr2A 96.429 196 7 0 2393 2588 207582081 207582276 8.930000e-85 324.0
8 TraesCS2B01G245500 chr2A 100.000 29 0 0 445 473 49810180 49810152 1.000000e-03 54.7
9 TraesCS2B01G245500 chr5D 89.376 433 39 6 16 444 94344554 94344983 2.930000e-149 538.0
10 TraesCS2B01G245500 chr4D 88.367 447 47 3 1 444 93350783 93351227 1.360000e-147 532.0
11 TraesCS2B01G245500 chr3D 88.558 437 45 3 11 444 602717165 602716731 2.280000e-145 525.0
12 TraesCS2B01G245500 chr5A 87.472 447 51 4 1 444 16791607 16791163 6.390000e-141 510.0
13 TraesCS2B01G245500 chr5A 87.248 447 52 3 1 444 635904486 635904042 2.970000e-139 505.0
14 TraesCS2B01G245500 chr5A 86.384 448 55 5 1 444 88647515 88647960 3.870000e-133 484.0
15 TraesCS2B01G245500 chr6D 87.444 446 50 6 1 443 336516251 336515809 2.300000e-140 508.0
16 TraesCS2B01G245500 chr6D 86.830 448 53 6 1 444 61175259 61175704 1.790000e-136 496.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G245500 chr2B 249462938 249465525 2587 False 4780.000000 4780 100.000000 1 2588 1 chr2B.!!$F1 2587
1 TraesCS2B01G245500 chr2D 193342353 193344477 2124 False 1019.666667 2148 95.341000 529 2588 3 chr2D.!!$F2 2059
2 TraesCS2B01G245500 chr2A 207580065 207582276 2211 False 929.000000 1919 94.480333 468 2588 3 chr2A.!!$F1 2120

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
140 141 0.031857 CAAACAGGCATCGCACCAAA 59.968 50.0 0.0 0.0 0.0 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2022 2130 0.039035 TGAAGCTTAATGGGGGCGTT 59.961 50.0 0.0 0.0 0.0 4.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 8.205131 ACTTTACAAAGTAGTACACCAGTTTG 57.795 34.615 5.56 15.41 46.75 2.93
39 40 7.825761 ACTTTACAAAGTAGTACACCAGTTTGT 59.174 33.333 21.57 21.57 46.75 2.83
40 41 8.564509 TTTACAAAGTAGTACACCAGTTTGTT 57.435 30.769 22.39 13.00 42.72 2.83
41 42 6.673154 ACAAAGTAGTACACCAGTTTGTTC 57.327 37.500 16.30 0.00 42.72 3.18
42 43 5.292589 ACAAAGTAGTACACCAGTTTGTTCG 59.707 40.000 16.30 0.00 42.72 3.95
43 44 4.924305 AGTAGTACACCAGTTTGTTCGA 57.076 40.909 2.52 0.00 0.00 3.71
44 45 5.266733 AGTAGTACACCAGTTTGTTCGAA 57.733 39.130 2.52 0.00 0.00 3.71
45 46 5.287226 AGTAGTACACCAGTTTGTTCGAAG 58.713 41.667 0.00 0.00 0.00 3.79
46 47 2.870411 AGTACACCAGTTTGTTCGAAGC 59.130 45.455 0.00 0.00 0.00 3.86
47 48 1.021968 ACACCAGTTTGTTCGAAGCC 58.978 50.000 0.00 0.00 0.00 4.35
48 49 1.021202 CACCAGTTTGTTCGAAGCCA 58.979 50.000 0.00 0.00 0.00 4.75
49 50 1.021968 ACCAGTTTGTTCGAAGCCAC 58.978 50.000 0.00 0.00 0.00 5.01
50 51 0.310854 CCAGTTTGTTCGAAGCCACC 59.689 55.000 0.00 0.00 0.00 4.61
51 52 1.021202 CAGTTTGTTCGAAGCCACCA 58.979 50.000 0.00 0.00 0.00 4.17
52 53 1.021968 AGTTTGTTCGAAGCCACCAC 58.978 50.000 0.00 0.00 0.00 4.16
53 54 0.736053 GTTTGTTCGAAGCCACCACA 59.264 50.000 0.00 0.00 0.00 4.17
54 55 1.336755 GTTTGTTCGAAGCCACCACAT 59.663 47.619 0.00 0.00 0.00 3.21
55 56 1.234821 TTGTTCGAAGCCACCACATC 58.765 50.000 0.00 0.00 0.00 3.06
56 57 0.396435 TGTTCGAAGCCACCACATCT 59.604 50.000 0.00 0.00 0.00 2.90
57 58 1.202758 TGTTCGAAGCCACCACATCTT 60.203 47.619 0.00 0.00 0.00 2.40
58 59 2.037902 TGTTCGAAGCCACCACATCTTA 59.962 45.455 0.00 0.00 0.00 2.10
59 60 2.672961 TCGAAGCCACCACATCTTAG 57.327 50.000 0.00 0.00 0.00 2.18
60 61 1.009829 CGAAGCCACCACATCTTAGC 58.990 55.000 0.00 0.00 0.00 3.09
61 62 1.675714 CGAAGCCACCACATCTTAGCA 60.676 52.381 0.00 0.00 0.00 3.49
62 63 2.436417 GAAGCCACCACATCTTAGCAA 58.564 47.619 0.00 0.00 0.00 3.91
63 64 1.826385 AGCCACCACATCTTAGCAAC 58.174 50.000 0.00 0.00 0.00 4.17
64 65 1.073763 AGCCACCACATCTTAGCAACA 59.926 47.619 0.00 0.00 0.00 3.33
65 66 1.885887 GCCACCACATCTTAGCAACAA 59.114 47.619 0.00 0.00 0.00 2.83
66 67 2.351738 GCCACCACATCTTAGCAACAAC 60.352 50.000 0.00 0.00 0.00 3.32
67 68 3.149196 CCACCACATCTTAGCAACAACT 58.851 45.455 0.00 0.00 0.00 3.16
68 69 3.058016 CCACCACATCTTAGCAACAACTG 60.058 47.826 0.00 0.00 0.00 3.16
69 70 3.565482 CACCACATCTTAGCAACAACTGT 59.435 43.478 0.00 0.00 0.00 3.55
70 71 3.815401 ACCACATCTTAGCAACAACTGTC 59.185 43.478 0.00 0.00 0.00 3.51
71 72 3.120546 CCACATCTTAGCAACAACTGTCG 60.121 47.826 0.00 0.00 0.00 4.35
72 73 3.740832 CACATCTTAGCAACAACTGTCGA 59.259 43.478 0.00 0.00 0.00 4.20
73 74 4.389992 CACATCTTAGCAACAACTGTCGAT 59.610 41.667 0.00 0.00 0.00 3.59
74 75 5.576774 CACATCTTAGCAACAACTGTCGATA 59.423 40.000 0.00 0.00 0.00 2.92
75 76 6.256539 CACATCTTAGCAACAACTGTCGATAT 59.743 38.462 0.00 0.00 0.00 1.63
76 77 6.818644 ACATCTTAGCAACAACTGTCGATATT 59.181 34.615 0.00 0.00 0.00 1.28
77 78 7.334421 ACATCTTAGCAACAACTGTCGATATTT 59.666 33.333 0.00 0.00 0.00 1.40
78 79 7.290857 TCTTAGCAACAACTGTCGATATTTC 57.709 36.000 0.00 0.00 0.00 2.17
79 80 7.097192 TCTTAGCAACAACTGTCGATATTTCT 58.903 34.615 0.00 0.00 0.00 2.52
80 81 8.248253 TCTTAGCAACAACTGTCGATATTTCTA 58.752 33.333 0.00 0.00 0.00 2.10
81 82 8.766000 TTAGCAACAACTGTCGATATTTCTAA 57.234 30.769 0.00 0.00 0.00 2.10
82 83 7.061752 AGCAACAACTGTCGATATTTCTAAC 57.938 36.000 0.00 0.00 0.00 2.34
83 84 6.092259 AGCAACAACTGTCGATATTTCTAACC 59.908 38.462 0.00 0.00 0.00 2.85
84 85 6.128391 GCAACAACTGTCGATATTTCTAACCA 60.128 38.462 0.00 0.00 0.00 3.67
85 86 6.963049 ACAACTGTCGATATTTCTAACCAC 57.037 37.500 0.00 0.00 0.00 4.16
86 87 6.698380 ACAACTGTCGATATTTCTAACCACT 58.302 36.000 0.00 0.00 0.00 4.00
87 88 7.159372 ACAACTGTCGATATTTCTAACCACTT 58.841 34.615 0.00 0.00 0.00 3.16
88 89 7.117812 ACAACTGTCGATATTTCTAACCACTTG 59.882 37.037 0.00 0.00 0.00 3.16
89 90 6.931838 ACTGTCGATATTTCTAACCACTTGA 58.068 36.000 0.00 0.00 0.00 3.02
90 91 7.556844 ACTGTCGATATTTCTAACCACTTGAT 58.443 34.615 0.00 0.00 0.00 2.57
91 92 7.492669 ACTGTCGATATTTCTAACCACTTGATG 59.507 37.037 0.00 0.00 0.00 3.07
92 93 7.552459 TGTCGATATTTCTAACCACTTGATGA 58.448 34.615 0.00 0.00 0.00 2.92
93 94 8.038351 TGTCGATATTTCTAACCACTTGATGAA 58.962 33.333 0.00 0.00 0.00 2.57
94 95 8.543774 GTCGATATTTCTAACCACTTGATGAAG 58.456 37.037 0.00 0.00 35.07 3.02
95 96 7.710907 TCGATATTTCTAACCACTTGATGAAGG 59.289 37.037 0.00 0.00 32.95 3.46
96 97 7.041780 CGATATTTCTAACCACTTGATGAAGGG 60.042 40.741 0.00 0.00 32.95 3.95
99 100 3.909662 CCACTTGATGAAGGGGCG 58.090 61.111 0.00 0.00 46.07 6.13
100 101 2.409870 CCACTTGATGAAGGGGCGC 61.410 63.158 0.00 0.00 46.07 6.53
101 102 2.044946 ACTTGATGAAGGGGCGCC 60.045 61.111 21.18 21.18 32.95 6.53
102 103 3.204827 CTTGATGAAGGGGCGCCG 61.205 66.667 22.54 0.00 0.00 6.46
103 104 3.680620 CTTGATGAAGGGGCGCCGA 62.681 63.158 22.54 1.27 0.00 5.54
104 105 2.947938 CTTGATGAAGGGGCGCCGAT 62.948 60.000 22.54 8.55 0.00 4.18
105 106 1.691195 TTGATGAAGGGGCGCCGATA 61.691 55.000 22.54 5.05 0.00 2.92
106 107 1.374758 GATGAAGGGGCGCCGATAG 60.375 63.158 22.54 0.00 0.00 2.08
107 108 2.100879 GATGAAGGGGCGCCGATAGT 62.101 60.000 22.54 4.23 0.00 2.12
108 109 2.029221 GAAGGGGCGCCGATAGTC 59.971 66.667 22.54 9.40 0.00 2.59
109 110 3.516866 GAAGGGGCGCCGATAGTCC 62.517 68.421 22.54 15.10 0.00 3.85
110 111 4.853142 AGGGGCGCCGATAGTCCA 62.853 66.667 22.54 0.00 0.00 4.02
111 112 3.857038 GGGGCGCCGATAGTCCAA 61.857 66.667 22.54 0.00 0.00 3.53
112 113 2.280186 GGGCGCCGATAGTCCAAG 60.280 66.667 22.54 0.00 0.00 3.61
113 114 2.792947 GGGCGCCGATAGTCCAAGA 61.793 63.158 22.54 0.00 0.00 3.02
114 115 1.591863 GGCGCCGATAGTCCAAGAC 60.592 63.158 12.58 0.00 0.00 3.01
115 116 1.437986 GCGCCGATAGTCCAAGACT 59.562 57.895 0.00 2.38 45.54 3.24
117 118 1.066605 GCGCCGATAGTCCAAGACTAA 59.933 52.381 8.44 0.00 46.28 2.24
118 119 2.288273 GCGCCGATAGTCCAAGACTAAT 60.288 50.000 8.44 0.00 46.28 1.73
119 120 3.057736 GCGCCGATAGTCCAAGACTAATA 60.058 47.826 8.44 0.00 46.28 0.98
120 121 4.474113 CGCCGATAGTCCAAGACTAATAC 58.526 47.826 8.44 3.62 46.28 1.89
121 122 4.615452 CGCCGATAGTCCAAGACTAATACC 60.615 50.000 8.44 0.00 46.28 2.73
122 123 4.280174 GCCGATAGTCCAAGACTAATACCA 59.720 45.833 8.44 0.00 46.28 3.25
123 124 5.221382 GCCGATAGTCCAAGACTAATACCAA 60.221 44.000 8.44 0.00 46.28 3.67
124 125 6.684613 GCCGATAGTCCAAGACTAATACCAAA 60.685 42.308 8.44 0.00 46.28 3.28
125 126 6.700520 CCGATAGTCCAAGACTAATACCAAAC 59.299 42.308 8.44 0.00 46.28 2.93
126 127 7.262772 CGATAGTCCAAGACTAATACCAAACA 58.737 38.462 8.44 0.00 46.28 2.83
127 128 7.435488 CGATAGTCCAAGACTAATACCAAACAG 59.565 40.741 8.44 0.00 46.28 3.16
128 129 5.805728 AGTCCAAGACTAATACCAAACAGG 58.194 41.667 0.00 0.00 41.51 4.00
129 130 4.395231 GTCCAAGACTAATACCAAACAGGC 59.605 45.833 0.00 0.00 43.14 4.85
130 131 4.042311 TCCAAGACTAATACCAAACAGGCA 59.958 41.667 0.00 0.00 43.14 4.75
131 132 4.949856 CCAAGACTAATACCAAACAGGCAT 59.050 41.667 0.00 0.00 43.14 4.40
132 133 5.066505 CCAAGACTAATACCAAACAGGCATC 59.933 44.000 0.00 0.00 43.14 3.91
133 134 4.442706 AGACTAATACCAAACAGGCATCG 58.557 43.478 0.00 0.00 43.14 3.84
134 135 2.943033 ACTAATACCAAACAGGCATCGC 59.057 45.455 0.00 0.00 43.14 4.58
135 136 1.832883 AATACCAAACAGGCATCGCA 58.167 45.000 0.00 0.00 43.14 5.10
136 137 1.094785 ATACCAAACAGGCATCGCAC 58.905 50.000 0.00 0.00 43.14 5.34
137 138 0.958382 TACCAAACAGGCATCGCACC 60.958 55.000 0.00 0.00 43.14 5.01
138 139 2.267351 CCAAACAGGCATCGCACCA 61.267 57.895 0.00 0.00 0.00 4.17
139 140 1.659233 CAAACAGGCATCGCACCAA 59.341 52.632 0.00 0.00 0.00 3.67
140 141 0.031857 CAAACAGGCATCGCACCAAA 59.968 50.000 0.00 0.00 0.00 3.28
141 142 0.314935 AAACAGGCATCGCACCAAAG 59.685 50.000 0.00 0.00 0.00 2.77
142 143 2.146073 AACAGGCATCGCACCAAAGC 62.146 55.000 0.00 0.00 0.00 3.51
143 144 3.064324 AGGCATCGCACCAAAGCC 61.064 61.111 0.00 0.00 45.54 4.35
144 145 3.064324 GGCATCGCACCAAAGCCT 61.064 61.111 0.00 0.00 42.01 4.58
145 146 1.748879 GGCATCGCACCAAAGCCTA 60.749 57.895 0.00 0.00 42.01 3.93
146 147 1.312371 GGCATCGCACCAAAGCCTAA 61.312 55.000 0.00 0.00 42.01 2.69
147 148 0.179163 GCATCGCACCAAAGCCTAAC 60.179 55.000 0.00 0.00 0.00 2.34
148 149 1.164411 CATCGCACCAAAGCCTAACA 58.836 50.000 0.00 0.00 0.00 2.41
149 150 1.745087 CATCGCACCAAAGCCTAACAT 59.255 47.619 0.00 0.00 0.00 2.71
150 151 1.448985 TCGCACCAAAGCCTAACATC 58.551 50.000 0.00 0.00 0.00 3.06
151 152 1.003118 TCGCACCAAAGCCTAACATCT 59.997 47.619 0.00 0.00 0.00 2.90
152 153 2.235155 TCGCACCAAAGCCTAACATCTA 59.765 45.455 0.00 0.00 0.00 1.98
153 154 3.006940 CGCACCAAAGCCTAACATCTAA 58.993 45.455 0.00 0.00 0.00 2.10
154 155 3.438781 CGCACCAAAGCCTAACATCTAAA 59.561 43.478 0.00 0.00 0.00 1.85
155 156 4.437390 CGCACCAAAGCCTAACATCTAAAG 60.437 45.833 0.00 0.00 0.00 1.85
156 157 4.675408 GCACCAAAGCCTAACATCTAAAGC 60.675 45.833 0.00 0.00 0.00 3.51
157 158 3.689649 ACCAAAGCCTAACATCTAAAGCG 59.310 43.478 0.00 0.00 0.00 4.68
158 159 3.065371 CCAAAGCCTAACATCTAAAGCGG 59.935 47.826 0.00 0.00 0.00 5.52
159 160 2.622064 AGCCTAACATCTAAAGCGGG 57.378 50.000 0.00 0.00 0.00 6.13
160 161 2.116238 AGCCTAACATCTAAAGCGGGA 58.884 47.619 0.00 0.00 0.00 5.14
161 162 2.103263 AGCCTAACATCTAAAGCGGGAG 59.897 50.000 0.00 0.00 0.00 4.30
162 163 2.807108 GCCTAACATCTAAAGCGGGAGG 60.807 54.545 0.00 0.00 0.00 4.30
163 164 2.484889 CTAACATCTAAAGCGGGAGGC 58.515 52.381 0.00 0.00 44.05 4.70
164 165 0.107165 AACATCTAAAGCGGGAGGCC 60.107 55.000 0.00 0.00 45.17 5.19
165 166 1.227973 CATCTAAAGCGGGAGGCCC 60.228 63.158 0.00 0.00 45.17 5.80
179 180 4.740822 GCCCCAACCGAGCCACAT 62.741 66.667 0.00 0.00 0.00 3.21
180 181 2.994699 CCCCAACCGAGCCACATA 59.005 61.111 0.00 0.00 0.00 2.29
181 182 1.451387 CCCCAACCGAGCCACATAC 60.451 63.158 0.00 0.00 0.00 2.39
182 183 1.602237 CCCAACCGAGCCACATACT 59.398 57.895 0.00 0.00 0.00 2.12
183 184 0.744414 CCCAACCGAGCCACATACTG 60.744 60.000 0.00 0.00 0.00 2.74
184 185 0.744414 CCAACCGAGCCACATACTGG 60.744 60.000 0.00 0.00 44.08 4.00
185 186 0.744414 CAACCGAGCCACATACTGGG 60.744 60.000 0.00 0.00 41.02 4.45
195 196 4.993905 GCCACATACTGGGTTTTGAATAC 58.006 43.478 0.00 0.00 41.02 1.89
196 197 4.461081 GCCACATACTGGGTTTTGAATACA 59.539 41.667 0.00 0.00 41.02 2.29
197 198 5.047660 GCCACATACTGGGTTTTGAATACAA 60.048 40.000 0.00 0.00 41.02 2.41
198 199 6.517529 GCCACATACTGGGTTTTGAATACAAA 60.518 38.462 0.00 0.00 40.96 2.83
199 200 6.866248 CCACATACTGGGTTTTGAATACAAAC 59.134 38.462 0.00 0.00 39.70 2.93
200 201 6.866248 CACATACTGGGTTTTGAATACAAACC 59.134 38.462 6.08 6.08 44.22 3.27
201 202 4.577834 ACTGGGTTTTGAATACAAACCG 57.422 40.909 8.17 0.00 44.22 4.44
202 203 3.319689 ACTGGGTTTTGAATACAAACCGG 59.680 43.478 0.00 0.00 44.22 5.28
203 204 3.297736 TGGGTTTTGAATACAAACCGGT 58.702 40.909 0.00 0.00 44.22 5.28
204 205 3.318557 TGGGTTTTGAATACAAACCGGTC 59.681 43.478 8.04 0.00 44.22 4.79
205 206 3.305539 GGGTTTTGAATACAAACCGGTCC 60.306 47.826 8.04 0.00 44.22 4.46
206 207 3.318557 GGTTTTGAATACAAACCGGTCCA 59.681 43.478 8.04 0.00 44.22 4.02
207 208 4.202131 GGTTTTGAATACAAACCGGTCCAA 60.202 41.667 8.04 1.14 44.22 3.53
208 209 4.571372 TTTGAATACAAACCGGTCCAAC 57.429 40.909 8.04 0.00 40.47 3.77
209 210 2.144730 TGAATACAAACCGGTCCAACG 58.855 47.619 8.04 0.00 0.00 4.10
210 211 0.876399 AATACAAACCGGTCCAACGC 59.124 50.000 8.04 0.00 0.00 4.84
211 212 0.250381 ATACAAACCGGTCCAACGCA 60.250 50.000 8.04 0.00 0.00 5.24
212 213 1.159098 TACAAACCGGTCCAACGCAC 61.159 55.000 8.04 0.00 0.00 5.34
213 214 2.184167 CAAACCGGTCCAACGCACT 61.184 57.895 8.04 0.00 0.00 4.40
214 215 1.890510 AAACCGGTCCAACGCACTC 60.891 57.895 8.04 0.00 0.00 3.51
215 216 2.319890 AAACCGGTCCAACGCACTCT 62.320 55.000 8.04 0.00 0.00 3.24
216 217 2.432628 CCGGTCCAACGCACTCTC 60.433 66.667 0.00 0.00 0.00 3.20
217 218 2.338620 CGGTCCAACGCACTCTCA 59.661 61.111 0.00 0.00 0.00 3.27
218 219 1.079819 CGGTCCAACGCACTCTCAT 60.080 57.895 0.00 0.00 0.00 2.90
219 220 1.354337 CGGTCCAACGCACTCTCATG 61.354 60.000 0.00 0.00 0.00 3.07
220 221 0.320771 GGTCCAACGCACTCTCATGT 60.321 55.000 0.00 0.00 0.00 3.21
221 222 0.792640 GTCCAACGCACTCTCATGTG 59.207 55.000 0.00 0.00 40.62 3.21
222 223 0.392706 TCCAACGCACTCTCATGTGT 59.607 50.000 0.00 0.00 45.12 3.72
223 224 0.792640 CCAACGCACTCTCATGTGTC 59.207 55.000 0.00 0.00 42.42 3.67
224 225 0.436150 CAACGCACTCTCATGTGTCG 59.564 55.000 0.00 0.00 42.42 4.35
225 226 0.032130 AACGCACTCTCATGTGTCGT 59.968 50.000 9.77 9.77 42.42 4.34
226 227 0.387367 ACGCACTCTCATGTGTCGTC 60.387 55.000 9.77 0.00 42.25 4.20
227 228 1.398762 CGCACTCTCATGTGTCGTCG 61.399 60.000 0.00 0.00 39.89 5.12
228 229 1.678269 GCACTCTCATGTGTCGTCGC 61.678 60.000 0.00 0.00 39.89 5.19
229 230 1.073216 CACTCTCATGTGTCGTCGCC 61.073 60.000 0.00 0.00 33.61 5.54
230 231 1.869574 CTCTCATGTGTCGTCGCCG 60.870 63.158 0.00 0.00 0.00 6.46
231 232 2.126463 CTCATGTGTCGTCGCCGT 60.126 61.111 0.00 0.00 35.01 5.68
232 233 2.126618 TCATGTGTCGTCGCCGTC 60.127 61.111 0.00 0.00 35.01 4.79
233 234 3.532792 CATGTGTCGTCGCCGTCG 61.533 66.667 0.00 0.00 35.01 5.12
234 235 4.034258 ATGTGTCGTCGCCGTCGT 62.034 61.111 3.41 0.00 36.96 4.34
235 236 3.940975 ATGTGTCGTCGCCGTCGTC 62.941 63.158 3.41 0.00 36.96 4.20
236 237 4.380628 GTGTCGTCGCCGTCGTCT 62.381 66.667 3.41 0.00 36.96 4.18
237 238 3.653009 TGTCGTCGCCGTCGTCTT 61.653 61.111 3.41 0.00 36.96 3.01
238 239 2.868787 GTCGTCGCCGTCGTCTTC 60.869 66.667 3.41 0.00 36.96 2.87
239 240 4.093952 TCGTCGCCGTCGTCTTCC 62.094 66.667 3.41 0.00 36.96 3.46
240 241 4.394078 CGTCGCCGTCGTCTTCCA 62.394 66.667 0.00 0.00 36.96 3.53
241 242 2.804090 GTCGCCGTCGTCTTCCAC 60.804 66.667 0.00 0.00 36.96 4.02
242 243 4.047059 TCGCCGTCGTCTTCCACC 62.047 66.667 0.00 0.00 36.96 4.61
243 244 4.351938 CGCCGTCGTCTTCCACCA 62.352 66.667 0.00 0.00 0.00 4.17
244 245 2.029964 GCCGTCGTCTTCCACCAA 59.970 61.111 0.00 0.00 0.00 3.67
245 246 1.375523 GCCGTCGTCTTCCACCAAT 60.376 57.895 0.00 0.00 0.00 3.16
246 247 0.953960 GCCGTCGTCTTCCACCAATT 60.954 55.000 0.00 0.00 0.00 2.32
247 248 1.076332 CCGTCGTCTTCCACCAATTC 58.924 55.000 0.00 0.00 0.00 2.17
248 249 1.606994 CCGTCGTCTTCCACCAATTCA 60.607 52.381 0.00 0.00 0.00 2.57
249 250 2.346803 CGTCGTCTTCCACCAATTCAT 58.653 47.619 0.00 0.00 0.00 2.57
250 251 2.348666 CGTCGTCTTCCACCAATTCATC 59.651 50.000 0.00 0.00 0.00 2.92
251 252 3.600388 GTCGTCTTCCACCAATTCATCT 58.400 45.455 0.00 0.00 0.00 2.90
252 253 4.003648 GTCGTCTTCCACCAATTCATCTT 58.996 43.478 0.00 0.00 0.00 2.40
253 254 4.093556 GTCGTCTTCCACCAATTCATCTTC 59.906 45.833 0.00 0.00 0.00 2.87
254 255 4.002982 CGTCTTCCACCAATTCATCTTCA 58.997 43.478 0.00 0.00 0.00 3.02
255 256 4.093998 CGTCTTCCACCAATTCATCTTCAG 59.906 45.833 0.00 0.00 0.00 3.02
256 257 5.248640 GTCTTCCACCAATTCATCTTCAGA 58.751 41.667 0.00 0.00 0.00 3.27
257 258 5.353678 GTCTTCCACCAATTCATCTTCAGAG 59.646 44.000 0.00 0.00 0.00 3.35
258 259 3.614092 TCCACCAATTCATCTTCAGAGC 58.386 45.455 0.00 0.00 0.00 4.09
259 260 3.009363 TCCACCAATTCATCTTCAGAGCA 59.991 43.478 0.00 0.00 0.00 4.26
260 261 3.377485 CCACCAATTCATCTTCAGAGCAG 59.623 47.826 0.00 0.00 0.00 4.24
261 262 4.259356 CACCAATTCATCTTCAGAGCAGA 58.741 43.478 0.00 0.00 0.00 4.26
262 263 4.698780 CACCAATTCATCTTCAGAGCAGAA 59.301 41.667 0.00 0.00 0.00 3.02
263 264 5.182570 CACCAATTCATCTTCAGAGCAGAAA 59.817 40.000 0.00 0.00 0.00 2.52
264 265 5.182760 ACCAATTCATCTTCAGAGCAGAAAC 59.817 40.000 0.00 0.00 0.00 2.78
265 266 5.415077 CCAATTCATCTTCAGAGCAGAAACT 59.585 40.000 0.00 0.00 0.00 2.66
266 267 6.596888 CCAATTCATCTTCAGAGCAGAAACTA 59.403 38.462 0.00 0.00 0.00 2.24
267 268 7.120285 CCAATTCATCTTCAGAGCAGAAACTAA 59.880 37.037 0.00 0.00 0.00 2.24
268 269 7.608308 ATTCATCTTCAGAGCAGAAACTAAC 57.392 36.000 0.00 0.00 0.00 2.34
269 270 6.101650 TCATCTTCAGAGCAGAAACTAACA 57.898 37.500 0.00 0.00 0.00 2.41
270 271 5.928839 TCATCTTCAGAGCAGAAACTAACAC 59.071 40.000 0.00 0.00 0.00 3.32
271 272 5.276461 TCTTCAGAGCAGAAACTAACACA 57.724 39.130 0.00 0.00 0.00 3.72
272 273 5.050490 TCTTCAGAGCAGAAACTAACACAC 58.950 41.667 0.00 0.00 0.00 3.82
273 274 3.381045 TCAGAGCAGAAACTAACACACG 58.619 45.455 0.00 0.00 0.00 4.49
274 275 3.067601 TCAGAGCAGAAACTAACACACGA 59.932 43.478 0.00 0.00 0.00 4.35
275 276 3.990469 CAGAGCAGAAACTAACACACGAT 59.010 43.478 0.00 0.00 0.00 3.73
276 277 4.449068 CAGAGCAGAAACTAACACACGATT 59.551 41.667 0.00 0.00 0.00 3.34
277 278 5.050091 CAGAGCAGAAACTAACACACGATTT 60.050 40.000 0.00 0.00 0.00 2.17
278 279 5.527582 AGAGCAGAAACTAACACACGATTTT 59.472 36.000 0.00 0.00 0.00 1.82
279 280 5.510671 AGCAGAAACTAACACACGATTTTG 58.489 37.500 0.00 0.00 0.00 2.44
280 281 4.146443 GCAGAAACTAACACACGATTTTGC 59.854 41.667 0.00 0.00 0.00 3.68
281 282 4.675114 CAGAAACTAACACACGATTTTGCC 59.325 41.667 0.00 0.00 0.00 4.52
282 283 4.336993 AGAAACTAACACACGATTTTGCCA 59.663 37.500 0.00 0.00 0.00 4.92
283 284 3.896648 ACTAACACACGATTTTGCCAG 57.103 42.857 0.00 0.00 0.00 4.85
284 285 2.552315 ACTAACACACGATTTTGCCAGG 59.448 45.455 0.00 0.00 0.00 4.45
285 286 0.031994 AACACACGATTTTGCCAGGC 59.968 50.000 3.66 3.66 0.00 4.85
286 287 1.080569 CACACGATTTTGCCAGGCC 60.081 57.895 9.64 0.00 0.00 5.19
287 288 1.228552 ACACGATTTTGCCAGGCCT 60.229 52.632 9.64 0.00 0.00 5.19
288 289 1.244019 ACACGATTTTGCCAGGCCTC 61.244 55.000 9.64 0.00 0.00 4.70
289 290 0.962356 CACGATTTTGCCAGGCCTCT 60.962 55.000 9.64 0.00 0.00 3.69
290 291 0.678048 ACGATTTTGCCAGGCCTCTC 60.678 55.000 9.64 0.00 0.00 3.20
291 292 0.393537 CGATTTTGCCAGGCCTCTCT 60.394 55.000 9.64 0.00 0.00 3.10
292 293 1.101331 GATTTTGCCAGGCCTCTCTG 58.899 55.000 9.64 0.00 34.70 3.35
293 294 0.407139 ATTTTGCCAGGCCTCTCTGT 59.593 50.000 9.64 0.00 33.14 3.41
294 295 0.250901 TTTTGCCAGGCCTCTCTGTC 60.251 55.000 9.64 0.00 33.14 3.51
295 296 1.418097 TTTGCCAGGCCTCTCTGTCA 61.418 55.000 9.64 0.00 33.14 3.58
296 297 1.203441 TTGCCAGGCCTCTCTGTCAT 61.203 55.000 9.64 0.00 33.14 3.06
297 298 1.145819 GCCAGGCCTCTCTGTCATC 59.854 63.158 0.00 0.00 33.14 2.92
298 299 1.440893 CCAGGCCTCTCTGTCATCG 59.559 63.158 0.00 0.00 33.14 3.84
299 300 1.039785 CCAGGCCTCTCTGTCATCGA 61.040 60.000 0.00 0.00 33.14 3.59
300 301 0.102120 CAGGCCTCTCTGTCATCGAC 59.898 60.000 0.00 0.00 0.00 4.20
301 302 1.064946 GGCCTCTCTGTCATCGACG 59.935 63.158 0.00 0.00 34.95 5.12
302 303 1.658686 GGCCTCTCTGTCATCGACGT 61.659 60.000 0.00 0.00 34.95 4.34
303 304 0.248296 GCCTCTCTGTCATCGACGTC 60.248 60.000 5.18 5.18 34.95 4.34
304 305 1.087501 CCTCTCTGTCATCGACGTCA 58.912 55.000 17.16 3.13 34.95 4.35
305 306 1.202087 CCTCTCTGTCATCGACGTCAC 60.202 57.143 17.16 6.59 34.95 3.67
306 307 0.803117 TCTCTGTCATCGACGTCACC 59.197 55.000 17.16 0.00 34.95 4.02
307 308 0.521735 CTCTGTCATCGACGTCACCA 59.478 55.000 17.16 0.00 34.95 4.17
308 309 1.133216 CTCTGTCATCGACGTCACCAT 59.867 52.381 17.16 0.84 34.95 3.55
309 310 1.135402 TCTGTCATCGACGTCACCATG 60.135 52.381 17.16 13.67 34.95 3.66
310 311 0.885196 TGTCATCGACGTCACCATGA 59.115 50.000 17.16 15.68 34.95 3.07
311 312 1.269166 GTCATCGACGTCACCATGAC 58.731 55.000 24.94 24.94 43.65 3.06
318 319 4.192000 GTCACCATGACGCCAGAG 57.808 61.111 0.00 0.00 37.67 3.35
319 320 1.591703 GTCACCATGACGCCAGAGA 59.408 57.895 0.00 0.00 37.67 3.10
320 321 0.459237 GTCACCATGACGCCAGAGAG 60.459 60.000 0.00 0.00 37.67 3.20
321 322 1.812922 CACCATGACGCCAGAGAGC 60.813 63.158 0.00 0.00 0.00 4.09
329 330 2.757917 GCCAGAGAGCGTCCTCCT 60.758 66.667 3.19 0.00 38.96 3.69
330 331 2.781158 GCCAGAGAGCGTCCTCCTC 61.781 68.421 3.19 0.00 38.96 3.71
331 332 2.124693 CCAGAGAGCGTCCTCCTCC 61.125 68.421 3.19 0.00 38.96 4.30
332 333 1.077068 CAGAGAGCGTCCTCCTCCT 60.077 63.158 3.19 0.00 38.96 3.69
333 334 1.077068 AGAGAGCGTCCTCCTCCTG 60.077 63.158 3.19 0.00 38.96 3.86
334 335 2.043450 AGAGCGTCCTCCTCCTGG 60.043 66.667 0.00 0.00 38.96 4.45
335 336 3.151022 GAGCGTCCTCCTCCTGGG 61.151 72.222 0.00 0.00 31.68 4.45
339 340 3.151022 GTCCTCCTCCTGGGCGAG 61.151 72.222 0.00 0.00 34.39 5.03
340 341 3.673597 TCCTCCTCCTGGGCGAGT 61.674 66.667 9.24 0.00 34.39 4.18
341 342 3.151022 CCTCCTCCTGGGCGAGTC 61.151 72.222 9.24 0.00 34.39 3.36
342 343 3.151022 CTCCTCCTGGGCGAGTCC 61.151 72.222 0.00 0.00 34.39 3.85
343 344 3.965026 CTCCTCCTGGGCGAGTCCA 62.965 68.421 0.00 0.00 36.21 4.02
344 345 2.765807 CCTCCTGGGCGAGTCCAT 60.766 66.667 0.00 0.00 36.05 3.41
345 346 2.801631 CCTCCTGGGCGAGTCCATC 61.802 68.421 0.00 0.00 36.05 3.51
346 347 1.760086 CTCCTGGGCGAGTCCATCT 60.760 63.158 0.00 0.00 36.05 2.90
347 348 1.743321 CTCCTGGGCGAGTCCATCTC 61.743 65.000 0.00 0.00 39.62 2.75
348 349 2.801631 CCTGGGCGAGTCCATCTCC 61.802 68.421 0.00 0.00 39.84 3.71
349 350 3.144120 CTGGGCGAGTCCATCTCCG 62.144 68.421 0.00 0.00 39.84 4.63
350 351 4.593864 GGGCGAGTCCATCTCCGC 62.594 72.222 0.00 0.00 39.84 5.54
351 352 4.933064 GGCGAGTCCATCTCCGCG 62.933 72.222 0.00 0.00 40.64 6.46
353 354 4.193334 CGAGTCCATCTCCGCGCA 62.193 66.667 8.75 0.00 39.84 6.09
354 355 2.419198 GAGTCCATCTCCGCGCAT 59.581 61.111 8.75 0.00 37.22 4.73
355 356 1.663074 GAGTCCATCTCCGCGCATC 60.663 63.158 8.75 0.00 37.22 3.91
356 357 3.032609 GTCCATCTCCGCGCATCG 61.033 66.667 8.75 0.00 38.08 3.84
374 375 3.442996 GGACACCGAGTCTCCATTG 57.557 57.895 7.70 0.00 46.72 2.82
375 376 0.741221 GGACACCGAGTCTCCATTGC 60.741 60.000 7.70 0.00 46.72 3.56
376 377 0.741221 GACACCGAGTCTCCATTGCC 60.741 60.000 0.00 0.00 44.09 4.52
377 378 1.296392 CACCGAGTCTCCATTGCCA 59.704 57.895 0.00 0.00 0.00 4.92
378 379 0.107508 CACCGAGTCTCCATTGCCAT 60.108 55.000 0.00 0.00 0.00 4.40
379 380 0.107508 ACCGAGTCTCCATTGCCATG 60.108 55.000 0.00 0.00 0.00 3.66
380 381 1.442526 CCGAGTCTCCATTGCCATGC 61.443 60.000 0.00 0.00 0.00 4.06
381 382 1.442526 CGAGTCTCCATTGCCATGCC 61.443 60.000 0.00 0.00 0.00 4.40
382 383 0.394762 GAGTCTCCATTGCCATGCCA 60.395 55.000 0.00 0.00 0.00 4.92
383 384 0.682209 AGTCTCCATTGCCATGCCAC 60.682 55.000 0.00 0.00 0.00 5.01
384 385 1.380246 TCTCCATTGCCATGCCACC 60.380 57.895 0.00 0.00 0.00 4.61
385 386 2.755064 TCCATTGCCATGCCACCG 60.755 61.111 0.00 0.00 0.00 4.94
386 387 2.755064 CCATTGCCATGCCACCGA 60.755 61.111 0.00 0.00 0.00 4.69
387 388 2.777972 CCATTGCCATGCCACCGAG 61.778 63.158 0.00 0.00 0.00 4.63
388 389 1.750018 CATTGCCATGCCACCGAGA 60.750 57.895 0.00 0.00 0.00 4.04
389 390 1.105167 CATTGCCATGCCACCGAGAT 61.105 55.000 0.00 0.00 0.00 2.75
390 391 0.820891 ATTGCCATGCCACCGAGATC 60.821 55.000 0.00 0.00 0.00 2.75
391 392 2.592861 GCCATGCCACCGAGATCC 60.593 66.667 0.00 0.00 0.00 3.36
392 393 2.280389 CCATGCCACCGAGATCCG 60.280 66.667 0.00 0.00 38.18 4.18
393 394 2.969238 CATGCCACCGAGATCCGC 60.969 66.667 0.00 0.00 36.84 5.54
394 395 4.241555 ATGCCACCGAGATCCGCC 62.242 66.667 0.00 0.00 36.84 6.13
401 402 4.284860 CGAGATCCGCCGCCATCA 62.285 66.667 0.00 0.00 0.00 3.07
402 403 2.108976 GAGATCCGCCGCCATCAA 59.891 61.111 0.00 0.00 0.00 2.57
403 404 1.302033 GAGATCCGCCGCCATCAAT 60.302 57.895 0.00 0.00 0.00 2.57
404 405 1.572085 GAGATCCGCCGCCATCAATG 61.572 60.000 0.00 0.00 0.00 2.82
405 406 1.597854 GATCCGCCGCCATCAATGA 60.598 57.895 0.00 0.00 0.00 2.57
406 407 1.572085 GATCCGCCGCCATCAATGAG 61.572 60.000 0.00 0.00 0.00 2.90
407 408 2.329539 ATCCGCCGCCATCAATGAGT 62.330 55.000 0.00 0.00 0.00 3.41
408 409 1.227527 CCGCCGCCATCAATGAGTA 60.228 57.895 0.00 0.00 0.00 2.59
409 410 0.813610 CCGCCGCCATCAATGAGTAA 60.814 55.000 0.00 0.00 0.00 2.24
410 411 0.583438 CGCCGCCATCAATGAGTAAG 59.417 55.000 0.00 0.00 0.00 2.34
411 412 1.806247 CGCCGCCATCAATGAGTAAGA 60.806 52.381 0.00 0.00 0.00 2.10
412 413 2.498167 GCCGCCATCAATGAGTAAGAT 58.502 47.619 0.00 0.00 0.00 2.40
413 414 2.225019 GCCGCCATCAATGAGTAAGATG 59.775 50.000 0.00 0.00 39.02 2.90
414 415 3.732212 CCGCCATCAATGAGTAAGATGA 58.268 45.455 0.00 0.00 41.18 2.92
415 416 4.129380 CCGCCATCAATGAGTAAGATGAA 58.871 43.478 0.00 0.00 41.18 2.57
416 417 4.212847 CCGCCATCAATGAGTAAGATGAAG 59.787 45.833 0.00 0.00 41.18 3.02
417 418 4.319333 CGCCATCAATGAGTAAGATGAAGC 60.319 45.833 0.00 0.00 41.18 3.86
418 419 4.319333 GCCATCAATGAGTAAGATGAAGCG 60.319 45.833 0.00 0.00 41.18 4.68
419 420 4.319333 CCATCAATGAGTAAGATGAAGCGC 60.319 45.833 0.00 0.00 41.18 5.92
420 421 3.198068 TCAATGAGTAAGATGAAGCGCC 58.802 45.455 2.29 0.00 0.00 6.53
421 422 2.938451 CAATGAGTAAGATGAAGCGCCA 59.062 45.455 2.29 0.00 0.00 5.69
422 423 2.010145 TGAGTAAGATGAAGCGCCAC 57.990 50.000 2.29 0.00 0.00 5.01
423 424 1.550524 TGAGTAAGATGAAGCGCCACT 59.449 47.619 2.29 0.00 0.00 4.00
424 425 2.197577 GAGTAAGATGAAGCGCCACTC 58.802 52.381 2.29 0.00 0.00 3.51
425 426 1.134670 AGTAAGATGAAGCGCCACTCC 60.135 52.381 2.29 0.00 0.00 3.85
426 427 0.901827 TAAGATGAAGCGCCACTCCA 59.098 50.000 2.29 0.00 0.00 3.86
427 428 0.254178 AAGATGAAGCGCCACTCCAT 59.746 50.000 2.29 0.00 0.00 3.41
428 429 0.179062 AGATGAAGCGCCACTCCATC 60.179 55.000 2.29 10.13 35.21 3.51
429 430 0.462581 GATGAAGCGCCACTCCATCA 60.463 55.000 2.29 0.00 35.12 3.07
430 431 0.035152 ATGAAGCGCCACTCCATCAA 60.035 50.000 2.29 0.00 0.00 2.57
431 432 0.250684 TGAAGCGCCACTCCATCAAA 60.251 50.000 2.29 0.00 0.00 2.69
432 433 0.449388 GAAGCGCCACTCCATCAAAG 59.551 55.000 2.29 0.00 0.00 2.77
433 434 0.036732 AAGCGCCACTCCATCAAAGA 59.963 50.000 2.29 0.00 0.00 2.52
434 435 0.036732 AGCGCCACTCCATCAAAGAA 59.963 50.000 2.29 0.00 0.00 2.52
435 436 0.449388 GCGCCACTCCATCAAAGAAG 59.551 55.000 0.00 0.00 0.00 2.85
436 437 0.449388 CGCCACTCCATCAAAGAAGC 59.551 55.000 0.00 0.00 0.00 3.86
437 438 0.813821 GCCACTCCATCAAAGAAGCC 59.186 55.000 0.00 0.00 0.00 4.35
438 439 1.089920 CCACTCCATCAAAGAAGCCG 58.910 55.000 0.00 0.00 0.00 5.52
439 440 1.611673 CCACTCCATCAAAGAAGCCGT 60.612 52.381 0.00 0.00 0.00 5.68
440 441 1.734465 CACTCCATCAAAGAAGCCGTC 59.266 52.381 0.00 0.00 0.00 4.79
441 442 1.339151 ACTCCATCAAAGAAGCCGTCC 60.339 52.381 0.00 0.00 0.00 4.79
442 443 0.690192 TCCATCAAAGAAGCCGTCCA 59.310 50.000 0.00 0.00 0.00 4.02
443 444 0.804989 CCATCAAAGAAGCCGTCCAC 59.195 55.000 0.00 0.00 0.00 4.02
444 445 0.804989 CATCAAAGAAGCCGTCCACC 59.195 55.000 0.00 0.00 0.00 4.61
445 446 0.673644 ATCAAAGAAGCCGTCCACCG 60.674 55.000 0.00 0.00 0.00 4.94
446 447 1.301401 CAAAGAAGCCGTCCACCGA 60.301 57.895 0.00 0.00 39.56 4.69
447 448 1.004918 AAAGAAGCCGTCCACCGAG 60.005 57.895 0.00 0.00 39.56 4.63
448 449 1.469335 AAAGAAGCCGTCCACCGAGA 61.469 55.000 0.00 0.00 39.56 4.04
449 450 1.258445 AAGAAGCCGTCCACCGAGAT 61.258 55.000 0.00 0.00 39.56 2.75
450 451 1.227002 GAAGCCGTCCACCGAGATC 60.227 63.158 0.00 0.00 39.56 2.75
451 452 2.630592 GAAGCCGTCCACCGAGATCC 62.631 65.000 0.00 0.00 39.56 3.36
452 453 4.570663 GCCGTCCACCGAGATCCG 62.571 72.222 0.00 0.00 39.56 4.18
453 454 4.570663 CCGTCCACCGAGATCCGC 62.571 72.222 0.00 0.00 39.56 5.54
454 455 4.570663 CGTCCACCGAGATCCGCC 62.571 72.222 0.00 0.00 39.56 6.13
455 456 4.570663 GTCCACCGAGATCCGCCG 62.571 72.222 0.00 0.00 36.84 6.46
461 462 4.284860 CGAGATCCGCCGCCATCA 62.285 66.667 0.00 0.00 0.00 3.07
462 463 2.108976 GAGATCCGCCGCCATCAA 59.891 61.111 0.00 0.00 0.00 2.57
463 464 1.302033 GAGATCCGCCGCCATCAAT 60.302 57.895 0.00 0.00 0.00 2.57
464 465 1.572085 GAGATCCGCCGCCATCAATG 61.572 60.000 0.00 0.00 0.00 2.82
465 466 1.597854 GATCCGCCGCCATCAATGA 60.598 57.895 0.00 0.00 0.00 2.57
466 467 1.572085 GATCCGCCGCCATCAATGAG 61.572 60.000 0.00 0.00 0.00 2.90
520 521 3.509575 TGCTAAACTTGCCGGATTCAAAT 59.490 39.130 5.05 0.00 0.00 2.32
526 527 5.009854 ACTTGCCGGATTCAAATTTATGG 57.990 39.130 5.05 0.00 0.00 2.74
608 627 9.151471 GAAAAGTTATGTACATGTTGCTCTCTA 57.849 33.333 18.81 0.00 0.00 2.43
654 673 6.248433 AGTTTCCCAGAAATCACACATGTAT 58.752 36.000 0.00 0.00 0.00 2.29
655 674 7.402054 AGTTTCCCAGAAATCACACATGTATA 58.598 34.615 0.00 0.00 0.00 1.47
656 675 7.888021 AGTTTCCCAGAAATCACACATGTATAA 59.112 33.333 0.00 0.00 0.00 0.98
657 676 7.864108 TTCCCAGAAATCACACATGTATAAG 57.136 36.000 0.00 0.00 0.00 1.73
660 679 7.985184 TCCCAGAAATCACACATGTATAAGTAC 59.015 37.037 0.00 0.00 0.00 2.73
709 731 4.809426 CCAGCCGTTTAGTTTGAGGTATAG 59.191 45.833 0.00 0.00 0.00 1.31
744 766 7.093354 CGTACTTCTATACGTACTCCATCCTA 58.907 42.308 0.00 0.00 42.37 2.94
759 781 6.057321 TCCATCCTACATTTTACCGTTCTT 57.943 37.500 0.00 0.00 0.00 2.52
772 794 0.390472 CGTTCTTCCCAGACCAGAGC 60.390 60.000 0.00 0.00 0.00 4.09
808 830 0.598065 ACGCTCCCAAATCTGCAAAC 59.402 50.000 0.00 0.00 0.00 2.93
809 831 0.454957 CGCTCCCAAATCTGCAAACG 60.455 55.000 0.00 0.00 0.00 3.60
875 897 2.288395 CCGAGCAGCCAGAAACAAAATT 60.288 45.455 0.00 0.00 0.00 1.82
922 944 1.272769 GTCCTACATATGGCCGTCTCC 59.727 57.143 0.00 0.00 0.00 3.71
926 948 2.622064 ACATATGGCCGTCTCCTTTC 57.378 50.000 0.00 0.00 0.00 2.62
954 985 6.483640 GTCCCATTGACATCTAAACCATAGAC 59.516 42.308 0.00 0.00 43.85 2.59
970 1001 5.359009 ACCATAGACATTCATCAAAGGCTTG 59.641 40.000 0.00 0.00 0.00 4.01
1368 1399 2.281761 CTGCAGGCGGACAAGGTT 60.282 61.111 5.57 0.00 0.00 3.50
1488 1519 2.745037 GTGGTGCTGGGGACGTTA 59.255 61.111 0.00 0.00 0.00 3.18
1553 1584 0.248843 CCTCTCAAGCAGGAGACCAC 59.751 60.000 3.47 0.00 38.95 4.16
1656 1687 2.365617 TCAAGAACTGTGGGAGTGAGTC 59.634 50.000 0.00 0.00 34.02 3.36
1692 1723 7.308049 GGTGAGTTTACAAGCTTTTCTCTTAGG 60.308 40.741 0.00 0.00 0.00 2.69
1788 1822 0.814010 ATCAGTATTTCCCCGCGTGC 60.814 55.000 4.92 0.00 0.00 5.34
1826 1860 2.489040 TGCAGCCTGAGAATGCATG 58.511 52.632 0.00 0.00 44.56 4.06
1876 1913 4.098914 AGATCCACAAGGCAGTTACAAA 57.901 40.909 0.00 0.00 33.74 2.83
1885 1922 1.599419 GGCAGTTACAAACAGGCAACG 60.599 52.381 4.27 0.00 41.98 4.10
1887 1924 1.333619 CAGTTACAAACAGGCAACGCT 59.666 47.619 0.00 0.00 46.39 5.07
1904 1941 1.657538 CGCTCGTTGCTTGTTCTTGAC 60.658 52.381 2.29 0.00 40.11 3.18
1938 1975 4.032355 TGAAAAACAAACAGCGAATCGTC 58.968 39.130 4.07 0.00 0.00 4.20
1944 1981 1.714794 AACAGCGAATCGTCCTCAAG 58.285 50.000 4.07 0.00 0.00 3.02
1955 1992 1.822990 CGTCCTCAAGTACTAGCCCAA 59.177 52.381 0.00 0.00 0.00 4.12
1999 2036 4.082841 TCACTGTTATTTCAATGCGCACAT 60.083 37.500 14.90 0.54 38.49 3.21
2000 2037 4.030865 CACTGTTATTTCAATGCGCACATG 59.969 41.667 14.90 16.05 36.36 3.21
2001 2038 4.082841 ACTGTTATTTCAATGCGCACATGA 60.083 37.500 14.90 18.41 36.36 3.07
2002 2039 4.996344 TGTTATTTCAATGCGCACATGAT 58.004 34.783 23.57 14.74 36.36 2.45
2003 2040 6.129053 TGTTATTTCAATGCGCACATGATA 57.871 33.333 23.57 19.90 36.36 2.15
2004 2041 6.737118 TGTTATTTCAATGCGCACATGATAT 58.263 32.000 23.57 23.84 36.36 1.63
2032 2140 4.794334 TGTAATAACATTAACGCCCCCAT 58.206 39.130 0.00 0.00 0.00 4.00
2077 2199 2.726633 ACAACAATTGAAGAAACGCCG 58.273 42.857 13.59 0.00 0.00 6.46
2140 2262 4.796231 CCGTCCCTCGTGCTTCCG 62.796 72.222 0.00 0.00 37.94 4.30
2190 2315 1.079405 CAAGAAGAAGGCCGCCGTA 60.079 57.895 3.05 0.00 0.00 4.02
2391 2516 2.279918 GTGCACAACGAGGACGGT 60.280 61.111 13.17 0.00 44.46 4.83
2577 2772 3.573772 CTGTTCAGGGTGAGCGCGA 62.574 63.158 12.10 0.00 29.60 5.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 9.918630 GGTGTACTACTTTGTAAAGTCTTCATA 57.081 33.333 12.84 0.00 45.65 2.15
7 8 8.426489 TGGTGTACTACTTTGTAAAGTCTTCAT 58.574 33.333 12.84 0.30 45.65 2.57
8 9 7.784037 TGGTGTACTACTTTGTAAAGTCTTCA 58.216 34.615 12.84 6.82 45.65 3.02
9 10 7.924947 ACTGGTGTACTACTTTGTAAAGTCTTC 59.075 37.037 12.84 4.72 45.65 2.87
10 11 7.789026 ACTGGTGTACTACTTTGTAAAGTCTT 58.211 34.615 12.84 5.00 45.65 3.01
11 12 7.357429 ACTGGTGTACTACTTTGTAAAGTCT 57.643 36.000 12.84 3.68 45.65 3.24
12 13 8.333186 CAAACTGGTGTACTACTTTGTAAAGTC 58.667 37.037 12.84 0.98 45.65 3.01
14 15 8.205131 ACAAACTGGTGTACTACTTTGTAAAG 57.795 34.615 2.94 2.94 35.00 1.85
15 16 8.564509 AACAAACTGGTGTACTACTTTGTAAA 57.435 30.769 11.18 0.00 35.43 2.01
16 17 7.010367 CGAACAAACTGGTGTACTACTTTGTAA 59.990 37.037 11.18 0.00 35.43 2.41
17 18 6.476380 CGAACAAACTGGTGTACTACTTTGTA 59.524 38.462 11.18 0.00 35.43 2.41
18 19 5.292589 CGAACAAACTGGTGTACTACTTTGT 59.707 40.000 0.00 2.36 37.00 2.83
19 20 5.521010 TCGAACAAACTGGTGTACTACTTTG 59.479 40.000 0.00 1.82 31.74 2.77
20 21 5.663456 TCGAACAAACTGGTGTACTACTTT 58.337 37.500 0.00 0.00 0.00 2.66
21 22 5.266733 TCGAACAAACTGGTGTACTACTT 57.733 39.130 0.00 0.00 0.00 2.24
22 23 4.924305 TCGAACAAACTGGTGTACTACT 57.076 40.909 0.00 0.00 0.00 2.57
23 24 4.084693 GCTTCGAACAAACTGGTGTACTAC 60.085 45.833 0.00 0.00 0.00 2.73
24 25 4.053295 GCTTCGAACAAACTGGTGTACTA 58.947 43.478 0.00 0.00 0.00 1.82
25 26 2.870411 GCTTCGAACAAACTGGTGTACT 59.130 45.455 0.00 0.00 0.00 2.73
26 27 2.032290 GGCTTCGAACAAACTGGTGTAC 60.032 50.000 0.00 0.00 0.00 2.90
27 28 2.215196 GGCTTCGAACAAACTGGTGTA 58.785 47.619 0.00 0.00 0.00 2.90
28 29 1.021968 GGCTTCGAACAAACTGGTGT 58.978 50.000 0.00 0.00 0.00 4.16
29 30 1.021202 TGGCTTCGAACAAACTGGTG 58.979 50.000 0.00 0.00 0.00 4.17
30 31 1.021968 GTGGCTTCGAACAAACTGGT 58.978 50.000 0.00 0.00 0.00 4.00
31 32 0.310854 GGTGGCTTCGAACAAACTGG 59.689 55.000 0.00 0.00 0.00 4.00
32 33 1.021202 TGGTGGCTTCGAACAAACTG 58.979 50.000 0.00 0.00 0.00 3.16
33 34 1.021968 GTGGTGGCTTCGAACAAACT 58.978 50.000 0.00 0.00 0.00 2.66
34 35 0.736053 TGTGGTGGCTTCGAACAAAC 59.264 50.000 0.00 0.00 0.00 2.93
35 36 1.606668 GATGTGGTGGCTTCGAACAAA 59.393 47.619 0.00 0.00 0.00 2.83
36 37 1.202758 AGATGTGGTGGCTTCGAACAA 60.203 47.619 0.00 0.00 0.00 2.83
37 38 0.396435 AGATGTGGTGGCTTCGAACA 59.604 50.000 0.00 0.00 0.00 3.18
38 39 1.523758 AAGATGTGGTGGCTTCGAAC 58.476 50.000 0.00 0.00 0.00 3.95
39 40 2.935238 GCTAAGATGTGGTGGCTTCGAA 60.935 50.000 0.00 0.00 0.00 3.71
40 41 1.405526 GCTAAGATGTGGTGGCTTCGA 60.406 52.381 0.00 0.00 0.00 3.71
41 42 1.009829 GCTAAGATGTGGTGGCTTCG 58.990 55.000 0.00 0.00 0.00 3.79
42 43 2.113860 TGCTAAGATGTGGTGGCTTC 57.886 50.000 0.00 0.00 0.00 3.86
43 44 2.162681 GTTGCTAAGATGTGGTGGCTT 58.837 47.619 0.00 0.00 0.00 4.35
44 45 1.073763 TGTTGCTAAGATGTGGTGGCT 59.926 47.619 0.00 0.00 0.00 4.75
45 46 1.533625 TGTTGCTAAGATGTGGTGGC 58.466 50.000 0.00 0.00 0.00 5.01
46 47 3.058016 CAGTTGTTGCTAAGATGTGGTGG 60.058 47.826 0.00 0.00 0.00 4.61
47 48 3.565482 ACAGTTGTTGCTAAGATGTGGTG 59.435 43.478 0.00 0.00 0.00 4.17
48 49 3.815401 GACAGTTGTTGCTAAGATGTGGT 59.185 43.478 0.00 0.00 0.00 4.16
49 50 3.120546 CGACAGTTGTTGCTAAGATGTGG 60.121 47.826 0.00 0.00 0.00 4.17
50 51 3.740832 TCGACAGTTGTTGCTAAGATGTG 59.259 43.478 0.00 0.00 0.00 3.21
51 52 3.990092 TCGACAGTTGTTGCTAAGATGT 58.010 40.909 0.00 0.00 0.00 3.06
52 53 6.834959 ATATCGACAGTTGTTGCTAAGATG 57.165 37.500 0.00 0.00 0.00 2.90
53 54 7.766278 AGAAATATCGACAGTTGTTGCTAAGAT 59.234 33.333 0.00 0.00 0.00 2.40
54 55 7.097192 AGAAATATCGACAGTTGTTGCTAAGA 58.903 34.615 0.00 0.00 0.00 2.10
55 56 7.295952 AGAAATATCGACAGTTGTTGCTAAG 57.704 36.000 0.00 0.00 0.00 2.18
56 57 8.653338 GTTAGAAATATCGACAGTTGTTGCTAA 58.347 33.333 0.00 0.00 0.00 3.09
57 58 7.277098 GGTTAGAAATATCGACAGTTGTTGCTA 59.723 37.037 0.00 0.00 0.00 3.49
58 59 6.092259 GGTTAGAAATATCGACAGTTGTTGCT 59.908 38.462 0.00 0.00 0.00 3.91
59 60 6.128391 TGGTTAGAAATATCGACAGTTGTTGC 60.128 38.462 0.00 0.00 0.00 4.17
60 61 7.117812 AGTGGTTAGAAATATCGACAGTTGTTG 59.882 37.037 0.00 0.00 0.00 3.33
61 62 7.159372 AGTGGTTAGAAATATCGACAGTTGTT 58.841 34.615 0.00 0.00 0.00 2.83
62 63 6.698380 AGTGGTTAGAAATATCGACAGTTGT 58.302 36.000 0.00 0.00 0.00 3.32
63 64 7.330946 TCAAGTGGTTAGAAATATCGACAGTTG 59.669 37.037 0.00 0.00 0.00 3.16
64 65 7.383687 TCAAGTGGTTAGAAATATCGACAGTT 58.616 34.615 0.00 0.00 0.00 3.16
65 66 6.931838 TCAAGTGGTTAGAAATATCGACAGT 58.068 36.000 0.00 0.00 0.00 3.55
66 67 7.706607 TCATCAAGTGGTTAGAAATATCGACAG 59.293 37.037 0.00 0.00 0.00 3.51
67 68 7.552459 TCATCAAGTGGTTAGAAATATCGACA 58.448 34.615 0.00 0.00 0.00 4.35
68 69 8.420374 TTCATCAAGTGGTTAGAAATATCGAC 57.580 34.615 0.00 0.00 0.00 4.20
69 70 7.710907 CCTTCATCAAGTGGTTAGAAATATCGA 59.289 37.037 0.00 0.00 0.00 3.59
70 71 7.041780 CCCTTCATCAAGTGGTTAGAAATATCG 60.042 40.741 0.00 0.00 0.00 2.92
71 72 7.229506 CCCCTTCATCAAGTGGTTAGAAATATC 59.770 40.741 0.00 0.00 0.00 1.63
72 73 7.062957 CCCCTTCATCAAGTGGTTAGAAATAT 58.937 38.462 0.00 0.00 0.00 1.28
73 74 6.423182 CCCCTTCATCAAGTGGTTAGAAATA 58.577 40.000 0.00 0.00 0.00 1.40
74 75 5.264395 CCCCTTCATCAAGTGGTTAGAAAT 58.736 41.667 0.00 0.00 0.00 2.17
75 76 4.662278 CCCCTTCATCAAGTGGTTAGAAA 58.338 43.478 0.00 0.00 0.00 2.52
76 77 3.561313 GCCCCTTCATCAAGTGGTTAGAA 60.561 47.826 0.00 0.00 29.98 2.10
77 78 2.026262 GCCCCTTCATCAAGTGGTTAGA 60.026 50.000 0.00 0.00 29.98 2.10
78 79 2.369394 GCCCCTTCATCAAGTGGTTAG 58.631 52.381 0.00 0.00 29.98 2.34
79 80 1.339631 CGCCCCTTCATCAAGTGGTTA 60.340 52.381 0.00 0.00 29.98 2.85
80 81 0.609131 CGCCCCTTCATCAAGTGGTT 60.609 55.000 0.00 0.00 29.98 3.67
81 82 1.002134 CGCCCCTTCATCAAGTGGT 60.002 57.895 0.00 0.00 29.98 4.16
82 83 2.409870 GCGCCCCTTCATCAAGTGG 61.410 63.158 0.00 0.00 30.44 4.00
83 84 2.409870 GGCGCCCCTTCATCAAGTG 61.410 63.158 18.11 0.00 0.00 3.16
84 85 2.044946 GGCGCCCCTTCATCAAGT 60.045 61.111 18.11 0.00 0.00 3.16
85 86 2.947938 ATCGGCGCCCCTTCATCAAG 62.948 60.000 23.46 1.99 0.00 3.02
86 87 1.691195 TATCGGCGCCCCTTCATCAA 61.691 55.000 23.46 0.00 0.00 2.57
87 88 2.099652 CTATCGGCGCCCCTTCATCA 62.100 60.000 23.46 0.00 0.00 3.07
88 89 1.374758 CTATCGGCGCCCCTTCATC 60.375 63.158 23.46 0.00 0.00 2.92
89 90 2.100879 GACTATCGGCGCCCCTTCAT 62.101 60.000 23.46 7.77 0.00 2.57
90 91 2.762459 ACTATCGGCGCCCCTTCA 60.762 61.111 23.46 0.00 0.00 3.02
91 92 2.029221 GACTATCGGCGCCCCTTC 59.971 66.667 23.46 6.64 0.00 3.46
92 93 3.547513 GGACTATCGGCGCCCCTT 61.548 66.667 23.46 8.38 0.00 3.95
93 94 4.853142 TGGACTATCGGCGCCCCT 62.853 66.667 23.46 11.11 0.00 4.79
94 95 3.809374 CTTGGACTATCGGCGCCCC 62.809 68.421 23.46 15.90 0.00 5.80
95 96 2.280186 CTTGGACTATCGGCGCCC 60.280 66.667 23.46 4.99 0.00 6.13
96 97 1.591863 GTCTTGGACTATCGGCGCC 60.592 63.158 19.07 19.07 0.00 6.53
97 98 0.666913 TAGTCTTGGACTATCGGCGC 59.333 55.000 0.00 0.00 41.51 6.53
98 99 3.644884 ATTAGTCTTGGACTATCGGCG 57.355 47.619 0.00 0.00 43.45 6.46
99 100 4.280174 TGGTATTAGTCTTGGACTATCGGC 59.720 45.833 8.02 1.33 43.45 5.54
100 101 6.401047 TTGGTATTAGTCTTGGACTATCGG 57.599 41.667 8.02 0.00 43.45 4.18
101 102 7.262772 TGTTTGGTATTAGTCTTGGACTATCG 58.737 38.462 8.02 0.00 43.45 2.92
102 103 7.711339 CCTGTTTGGTATTAGTCTTGGACTATC 59.289 40.741 8.02 3.54 43.45 2.08
103 104 7.565680 CCTGTTTGGTATTAGTCTTGGACTAT 58.434 38.462 8.02 2.88 43.45 2.12
104 105 6.575649 GCCTGTTTGGTATTAGTCTTGGACTA 60.576 42.308 3.61 3.61 39.89 2.59
105 106 5.803470 GCCTGTTTGGTATTAGTCTTGGACT 60.803 44.000 5.52 5.52 41.23 3.85
106 107 4.395231 GCCTGTTTGGTATTAGTCTTGGAC 59.605 45.833 0.00 0.00 38.35 4.02
107 108 4.042311 TGCCTGTTTGGTATTAGTCTTGGA 59.958 41.667 0.00 0.00 38.35 3.53
108 109 4.331968 TGCCTGTTTGGTATTAGTCTTGG 58.668 43.478 0.00 0.00 38.35 3.61
109 110 5.220662 CGATGCCTGTTTGGTATTAGTCTTG 60.221 44.000 0.00 0.00 41.35 3.02
110 111 4.876107 CGATGCCTGTTTGGTATTAGTCTT 59.124 41.667 0.00 0.00 41.35 3.01
111 112 4.442706 CGATGCCTGTTTGGTATTAGTCT 58.557 43.478 0.00 0.00 41.35 3.24
112 113 3.002348 GCGATGCCTGTTTGGTATTAGTC 59.998 47.826 0.00 0.00 41.35 2.59
113 114 2.943033 GCGATGCCTGTTTGGTATTAGT 59.057 45.455 0.00 0.00 41.35 2.24
114 115 2.942376 TGCGATGCCTGTTTGGTATTAG 59.058 45.455 0.00 0.00 41.35 1.73
115 116 2.680841 GTGCGATGCCTGTTTGGTATTA 59.319 45.455 0.00 0.00 41.35 0.98
116 117 1.472480 GTGCGATGCCTGTTTGGTATT 59.528 47.619 0.00 0.00 41.35 1.89
117 118 1.094785 GTGCGATGCCTGTTTGGTAT 58.905 50.000 0.00 0.00 44.04 2.73
118 119 0.958382 GGTGCGATGCCTGTTTGGTA 60.958 55.000 0.00 0.00 38.35 3.25
119 120 2.268076 GGTGCGATGCCTGTTTGGT 61.268 57.895 0.00 0.00 38.35 3.67
120 121 1.804396 TTGGTGCGATGCCTGTTTGG 61.804 55.000 0.00 0.00 39.35 3.28
121 122 0.031857 TTTGGTGCGATGCCTGTTTG 59.968 50.000 0.00 0.00 0.00 2.93
122 123 0.314935 CTTTGGTGCGATGCCTGTTT 59.685 50.000 0.00 0.00 0.00 2.83
123 124 1.959085 CTTTGGTGCGATGCCTGTT 59.041 52.632 0.00 0.00 0.00 3.16
124 125 2.629656 GCTTTGGTGCGATGCCTGT 61.630 57.895 0.00 0.00 0.00 4.00
125 126 2.180017 GCTTTGGTGCGATGCCTG 59.820 61.111 0.00 0.00 0.00 4.85
126 127 3.064324 GGCTTTGGTGCGATGCCT 61.064 61.111 0.00 0.00 40.36 4.75
127 128 1.312371 TTAGGCTTTGGTGCGATGCC 61.312 55.000 0.00 0.00 43.52 4.40
128 129 0.179163 GTTAGGCTTTGGTGCGATGC 60.179 55.000 0.00 0.00 0.00 3.91
129 130 1.164411 TGTTAGGCTTTGGTGCGATG 58.836 50.000 0.00 0.00 0.00 3.84
130 131 2.017049 GATGTTAGGCTTTGGTGCGAT 58.983 47.619 0.00 0.00 0.00 4.58
131 132 1.003118 AGATGTTAGGCTTTGGTGCGA 59.997 47.619 0.00 0.00 0.00 5.10
132 133 1.453155 AGATGTTAGGCTTTGGTGCG 58.547 50.000 0.00 0.00 0.00 5.34
133 134 4.675408 GCTTTAGATGTTAGGCTTTGGTGC 60.675 45.833 0.00 0.00 0.00 5.01
134 135 4.437390 CGCTTTAGATGTTAGGCTTTGGTG 60.437 45.833 0.00 0.00 0.00 4.17
135 136 3.689649 CGCTTTAGATGTTAGGCTTTGGT 59.310 43.478 0.00 0.00 0.00 3.67
136 137 3.065371 CCGCTTTAGATGTTAGGCTTTGG 59.935 47.826 0.00 0.00 0.00 3.28
137 138 3.065371 CCCGCTTTAGATGTTAGGCTTTG 59.935 47.826 0.00 0.00 0.00 2.77
138 139 3.054655 TCCCGCTTTAGATGTTAGGCTTT 60.055 43.478 0.00 0.00 0.00 3.51
139 140 2.504175 TCCCGCTTTAGATGTTAGGCTT 59.496 45.455 0.00 0.00 0.00 4.35
140 141 2.103263 CTCCCGCTTTAGATGTTAGGCT 59.897 50.000 0.00 0.00 0.00 4.58
141 142 2.484889 CTCCCGCTTTAGATGTTAGGC 58.515 52.381 0.00 0.00 0.00 3.93
142 143 2.807108 GCCTCCCGCTTTAGATGTTAGG 60.807 54.545 0.00 0.00 0.00 2.69
143 144 2.484889 GCCTCCCGCTTTAGATGTTAG 58.515 52.381 0.00 0.00 0.00 2.34
144 145 1.140252 GGCCTCCCGCTTTAGATGTTA 59.860 52.381 0.00 0.00 37.74 2.41
145 146 0.107165 GGCCTCCCGCTTTAGATGTT 60.107 55.000 0.00 0.00 37.74 2.71
146 147 1.527370 GGCCTCCCGCTTTAGATGT 59.473 57.895 0.00 0.00 37.74 3.06
147 148 1.227973 GGGCCTCCCGCTTTAGATG 60.228 63.158 0.84 0.00 37.74 2.90
148 149 2.452937 GGGGCCTCCCGCTTTAGAT 61.453 63.158 0.84 0.00 46.66 1.98
149 150 3.087906 GGGGCCTCCCGCTTTAGA 61.088 66.667 0.84 0.00 46.66 2.10
162 163 3.338275 TATGTGGCTCGGTTGGGGC 62.338 63.158 0.00 0.00 0.00 5.80
163 164 1.451387 GTATGTGGCTCGGTTGGGG 60.451 63.158 0.00 0.00 0.00 4.96
164 165 0.744414 CAGTATGTGGCTCGGTTGGG 60.744 60.000 0.00 0.00 0.00 4.12
165 166 0.744414 CCAGTATGTGGCTCGGTTGG 60.744 60.000 0.00 0.00 40.39 3.77
166 167 0.744414 CCCAGTATGTGGCTCGGTTG 60.744 60.000 0.00 0.00 46.45 3.77
167 168 1.198759 ACCCAGTATGTGGCTCGGTT 61.199 55.000 0.00 0.00 46.45 4.44
168 169 1.198759 AACCCAGTATGTGGCTCGGT 61.199 55.000 0.00 0.00 46.45 4.69
169 170 0.035439 AAACCCAGTATGTGGCTCGG 60.035 55.000 0.00 0.00 46.45 4.63
170 171 1.468520 CAAAACCCAGTATGTGGCTCG 59.531 52.381 0.00 0.00 46.45 5.03
171 172 2.790433 TCAAAACCCAGTATGTGGCTC 58.210 47.619 0.00 0.00 46.45 4.70
172 173 2.969821 TCAAAACCCAGTATGTGGCT 57.030 45.000 0.00 0.00 46.45 4.75
173 174 4.461081 TGTATTCAAAACCCAGTATGTGGC 59.539 41.667 0.00 0.00 46.45 5.01
174 175 6.866248 GTTTGTATTCAAAACCCAGTATGTGG 59.134 38.462 0.00 0.00 44.05 4.17
175 176 6.866248 GGTTTGTATTCAAAACCCAGTATGTG 59.134 38.462 1.59 0.00 43.19 3.21
176 177 6.294286 CGGTTTGTATTCAAAACCCAGTATGT 60.294 38.462 7.20 0.00 45.33 2.29
177 178 6.090129 CGGTTTGTATTCAAAACCCAGTATG 58.910 40.000 7.20 0.00 45.33 2.39
178 179 5.184287 CCGGTTTGTATTCAAAACCCAGTAT 59.816 40.000 7.20 0.00 45.33 2.12
179 180 4.519730 CCGGTTTGTATTCAAAACCCAGTA 59.480 41.667 7.20 0.00 45.33 2.74
180 181 3.319689 CCGGTTTGTATTCAAAACCCAGT 59.680 43.478 7.20 0.00 45.33 4.00
181 182 3.319689 ACCGGTTTGTATTCAAAACCCAG 59.680 43.478 0.00 6.79 45.33 4.45
182 183 3.297736 ACCGGTTTGTATTCAAAACCCA 58.702 40.909 0.00 0.00 45.33 4.51
183 184 3.305539 GGACCGGTTTGTATTCAAAACCC 60.306 47.826 9.42 0.00 45.33 4.11
184 185 3.318557 TGGACCGGTTTGTATTCAAAACC 59.681 43.478 9.42 0.00 45.33 3.27
185 186 4.571372 TGGACCGGTTTGTATTCAAAAC 57.429 40.909 9.42 2.93 44.85 2.43
186 187 4.497674 CGTTGGACCGGTTTGTATTCAAAA 60.498 41.667 9.42 0.00 43.78 2.44
187 188 3.003482 CGTTGGACCGGTTTGTATTCAAA 59.997 43.478 9.42 0.00 40.64 2.69
188 189 2.548904 CGTTGGACCGGTTTGTATTCAA 59.451 45.455 9.42 2.71 0.00 2.69
189 190 2.144730 CGTTGGACCGGTTTGTATTCA 58.855 47.619 9.42 0.00 0.00 2.57
190 191 1.135888 GCGTTGGACCGGTTTGTATTC 60.136 52.381 9.42 0.00 0.00 1.75
191 192 0.876399 GCGTTGGACCGGTTTGTATT 59.124 50.000 9.42 0.00 0.00 1.89
192 193 0.250381 TGCGTTGGACCGGTTTGTAT 60.250 50.000 9.42 0.00 0.00 2.29
193 194 1.145598 TGCGTTGGACCGGTTTGTA 59.854 52.632 9.42 0.00 0.00 2.41
194 195 2.124653 TGCGTTGGACCGGTTTGT 60.125 55.556 9.42 0.00 0.00 2.83
195 196 2.113131 GAGTGCGTTGGACCGGTTTG 62.113 60.000 9.42 0.00 0.00 2.93
196 197 1.890510 GAGTGCGTTGGACCGGTTT 60.891 57.895 9.42 0.00 0.00 3.27
197 198 2.280592 GAGTGCGTTGGACCGGTT 60.281 61.111 9.42 0.00 0.00 4.44
198 199 3.222354 GAGAGTGCGTTGGACCGGT 62.222 63.158 6.92 6.92 0.00 5.28
199 200 2.432628 GAGAGTGCGTTGGACCGG 60.433 66.667 0.00 0.00 0.00 5.28
200 201 1.079819 ATGAGAGTGCGTTGGACCG 60.080 57.895 0.00 0.00 0.00 4.79
201 202 0.320771 ACATGAGAGTGCGTTGGACC 60.321 55.000 0.00 0.00 0.00 4.46
202 203 0.792640 CACATGAGAGTGCGTTGGAC 59.207 55.000 0.00 0.00 32.04 4.02
203 204 0.392706 ACACATGAGAGTGCGTTGGA 59.607 50.000 0.00 0.00 43.23 3.53
204 205 0.792640 GACACATGAGAGTGCGTTGG 59.207 55.000 0.00 0.00 43.23 3.77
205 206 0.436150 CGACACATGAGAGTGCGTTG 59.564 55.000 0.00 0.00 43.23 4.10
206 207 0.032130 ACGACACATGAGAGTGCGTT 59.968 50.000 0.00 0.00 43.92 4.84
207 208 0.387367 GACGACACATGAGAGTGCGT 60.387 55.000 0.00 13.30 46.58 5.24
208 209 1.398762 CGACGACACATGAGAGTGCG 61.399 60.000 0.00 0.00 43.23 5.34
209 210 1.678269 GCGACGACACATGAGAGTGC 61.678 60.000 0.00 1.83 43.23 4.40
210 211 1.073216 GGCGACGACACATGAGAGTG 61.073 60.000 0.00 0.00 44.93 3.51
211 212 1.213013 GGCGACGACACATGAGAGT 59.787 57.895 0.00 0.00 0.00 3.24
212 213 4.079090 GGCGACGACACATGAGAG 57.921 61.111 0.00 0.00 0.00 3.20
224 225 2.804090 GTGGAAGACGACGGCGAC 60.804 66.667 22.49 13.05 41.64 5.19
225 226 4.047059 GGTGGAAGACGACGGCGA 62.047 66.667 22.49 0.00 41.64 5.54
226 227 3.851845 TTGGTGGAAGACGACGGCG 62.852 63.158 10.39 10.39 44.79 6.46
227 228 0.953960 AATTGGTGGAAGACGACGGC 60.954 55.000 0.00 0.00 0.00 5.68
228 229 1.076332 GAATTGGTGGAAGACGACGG 58.924 55.000 0.00 0.00 0.00 4.79
229 230 1.790755 TGAATTGGTGGAAGACGACG 58.209 50.000 0.00 0.00 0.00 5.12
230 231 3.600388 AGATGAATTGGTGGAAGACGAC 58.400 45.455 0.00 0.00 0.00 4.34
231 232 3.981071 AGATGAATTGGTGGAAGACGA 57.019 42.857 0.00 0.00 0.00 4.20
232 233 4.002982 TGAAGATGAATTGGTGGAAGACG 58.997 43.478 0.00 0.00 0.00 4.18
233 234 5.248640 TCTGAAGATGAATTGGTGGAAGAC 58.751 41.667 0.00 0.00 0.00 3.01
234 235 5.494724 CTCTGAAGATGAATTGGTGGAAGA 58.505 41.667 0.00 0.00 0.00 2.87
235 236 4.096081 GCTCTGAAGATGAATTGGTGGAAG 59.904 45.833 0.00 0.00 0.00 3.46
236 237 4.012374 GCTCTGAAGATGAATTGGTGGAA 58.988 43.478 0.00 0.00 0.00 3.53
237 238 3.009363 TGCTCTGAAGATGAATTGGTGGA 59.991 43.478 0.00 0.00 0.00 4.02
238 239 3.349927 TGCTCTGAAGATGAATTGGTGG 58.650 45.455 0.00 0.00 0.00 4.61
239 240 4.259356 TCTGCTCTGAAGATGAATTGGTG 58.741 43.478 0.00 0.00 0.00 4.17
240 241 4.564782 TCTGCTCTGAAGATGAATTGGT 57.435 40.909 0.00 0.00 0.00 3.67
241 242 5.415077 AGTTTCTGCTCTGAAGATGAATTGG 59.585 40.000 0.00 0.00 0.00 3.16
242 243 6.497785 AGTTTCTGCTCTGAAGATGAATTG 57.502 37.500 0.00 0.00 0.00 2.32
243 244 7.663081 TGTTAGTTTCTGCTCTGAAGATGAATT 59.337 33.333 0.00 0.00 0.00 2.17
244 245 7.118971 GTGTTAGTTTCTGCTCTGAAGATGAAT 59.881 37.037 0.00 0.00 0.00 2.57
245 246 6.425114 GTGTTAGTTTCTGCTCTGAAGATGAA 59.575 38.462 0.00 0.00 0.00 2.57
246 247 5.928839 GTGTTAGTTTCTGCTCTGAAGATGA 59.071 40.000 0.00 0.00 0.00 2.92
247 248 5.698089 TGTGTTAGTTTCTGCTCTGAAGATG 59.302 40.000 0.00 0.00 0.00 2.90
248 249 5.698545 GTGTGTTAGTTTCTGCTCTGAAGAT 59.301 40.000 0.00 0.00 0.00 2.40
249 250 5.050490 GTGTGTTAGTTTCTGCTCTGAAGA 58.950 41.667 0.00 0.00 0.00 2.87
250 251 4.084849 CGTGTGTTAGTTTCTGCTCTGAAG 60.085 45.833 0.00 0.00 0.00 3.02
251 252 3.802139 CGTGTGTTAGTTTCTGCTCTGAA 59.198 43.478 0.00 0.00 0.00 3.02
252 253 3.067601 TCGTGTGTTAGTTTCTGCTCTGA 59.932 43.478 0.00 0.00 0.00 3.27
253 254 3.381045 TCGTGTGTTAGTTTCTGCTCTG 58.619 45.455 0.00 0.00 0.00 3.35
254 255 3.728076 TCGTGTGTTAGTTTCTGCTCT 57.272 42.857 0.00 0.00 0.00 4.09
255 256 4.992381 AATCGTGTGTTAGTTTCTGCTC 57.008 40.909 0.00 0.00 0.00 4.26
256 257 5.510671 CAAAATCGTGTGTTAGTTTCTGCT 58.489 37.500 0.00 0.00 0.00 4.24
257 258 4.146443 GCAAAATCGTGTGTTAGTTTCTGC 59.854 41.667 0.00 0.00 0.00 4.26
258 259 4.675114 GGCAAAATCGTGTGTTAGTTTCTG 59.325 41.667 0.00 0.00 0.00 3.02
259 260 4.336993 TGGCAAAATCGTGTGTTAGTTTCT 59.663 37.500 0.00 0.00 0.00 2.52
260 261 4.602995 TGGCAAAATCGTGTGTTAGTTTC 58.397 39.130 0.00 0.00 0.00 2.78
261 262 4.499019 CCTGGCAAAATCGTGTGTTAGTTT 60.499 41.667 0.00 0.00 0.00 2.66
262 263 3.004315 CCTGGCAAAATCGTGTGTTAGTT 59.996 43.478 0.00 0.00 0.00 2.24
263 264 2.552315 CCTGGCAAAATCGTGTGTTAGT 59.448 45.455 0.00 0.00 0.00 2.24
264 265 2.668279 GCCTGGCAAAATCGTGTGTTAG 60.668 50.000 15.17 0.00 0.00 2.34
265 266 1.268352 GCCTGGCAAAATCGTGTGTTA 59.732 47.619 15.17 0.00 0.00 2.41
266 267 0.031994 GCCTGGCAAAATCGTGTGTT 59.968 50.000 15.17 0.00 0.00 3.32
267 268 1.659794 GCCTGGCAAAATCGTGTGT 59.340 52.632 15.17 0.00 0.00 3.72
268 269 1.080569 GGCCTGGCAAAATCGTGTG 60.081 57.895 22.05 0.00 0.00 3.82
269 270 1.228552 AGGCCTGGCAAAATCGTGT 60.229 52.632 22.05 0.00 0.00 4.49
270 271 0.962356 AGAGGCCTGGCAAAATCGTG 60.962 55.000 22.05 0.00 0.00 4.35
271 272 0.678048 GAGAGGCCTGGCAAAATCGT 60.678 55.000 22.05 3.15 0.00 3.73
272 273 0.393537 AGAGAGGCCTGGCAAAATCG 60.394 55.000 22.05 0.00 0.00 3.34
273 274 1.101331 CAGAGAGGCCTGGCAAAATC 58.899 55.000 22.05 12.16 0.00 2.17
274 275 0.407139 ACAGAGAGGCCTGGCAAAAT 59.593 50.000 22.05 2.54 38.44 1.82
275 276 0.250901 GACAGAGAGGCCTGGCAAAA 60.251 55.000 22.05 0.00 41.78 2.44
276 277 1.376466 GACAGAGAGGCCTGGCAAA 59.624 57.895 22.05 0.00 41.78 3.68
277 278 3.072476 GACAGAGAGGCCTGGCAA 58.928 61.111 22.05 0.00 41.78 4.52
279 280 1.145819 GATGACAGAGAGGCCTGGC 59.854 63.158 12.00 11.05 42.50 4.85
280 281 1.039785 TCGATGACAGAGAGGCCTGG 61.040 60.000 12.00 0.00 38.44 4.45
281 282 0.102120 GTCGATGACAGAGAGGCCTG 59.898 60.000 12.00 0.00 39.93 4.85
282 283 1.380403 CGTCGATGACAGAGAGGCCT 61.380 60.000 3.86 3.86 32.09 5.19
283 284 1.064946 CGTCGATGACAGAGAGGCC 59.935 63.158 0.00 0.00 32.09 5.19
284 285 0.248296 GACGTCGATGACAGAGAGGC 60.248 60.000 12.58 0.00 32.09 4.70
285 286 1.087501 TGACGTCGATGACAGAGAGG 58.912 55.000 12.58 2.37 32.09 3.69
286 287 1.202087 GGTGACGTCGATGACAGAGAG 60.202 57.143 12.58 0.00 32.09 3.20
287 288 0.803117 GGTGACGTCGATGACAGAGA 59.197 55.000 12.58 0.00 32.09 3.10
288 289 0.521735 TGGTGACGTCGATGACAGAG 59.478 55.000 12.58 0.00 32.09 3.35
289 290 1.135402 CATGGTGACGTCGATGACAGA 60.135 52.381 12.58 1.48 32.09 3.41
290 291 1.135402 TCATGGTGACGTCGATGACAG 60.135 52.381 12.58 0.00 30.07 3.51
291 292 0.885196 TCATGGTGACGTCGATGACA 59.115 50.000 12.58 8.87 30.07 3.58
292 293 1.269166 GTCATGGTGACGTCGATGAC 58.731 55.000 26.25 26.25 42.67 3.06
293 294 3.713936 GTCATGGTGACGTCGATGA 57.286 52.632 12.58 16.51 37.67 2.92
301 302 0.459237 CTCTCTGGCGTCATGGTGAC 60.459 60.000 0.00 0.07 43.65 3.67
302 303 1.893062 CTCTCTGGCGTCATGGTGA 59.107 57.895 0.00 0.00 0.00 4.02
303 304 1.812922 GCTCTCTGGCGTCATGGTG 60.813 63.158 0.00 0.00 0.00 4.17
304 305 2.581354 GCTCTCTGGCGTCATGGT 59.419 61.111 0.00 0.00 0.00 3.55
312 313 2.757917 AGGAGGACGCTCTCTGGC 60.758 66.667 5.73 0.00 34.39 4.85
313 314 2.124693 GGAGGAGGACGCTCTCTGG 61.125 68.421 5.73 0.00 34.39 3.86
314 315 1.077068 AGGAGGAGGACGCTCTCTG 60.077 63.158 5.73 0.00 34.39 3.35
315 316 1.077068 CAGGAGGAGGACGCTCTCT 60.077 63.158 5.73 0.00 34.39 3.10
316 317 2.124693 CCAGGAGGAGGACGCTCTC 61.125 68.421 0.00 0.00 36.89 3.20
317 318 2.043450 CCAGGAGGAGGACGCTCT 60.043 66.667 0.00 0.00 36.89 4.09
318 319 3.151022 CCCAGGAGGAGGACGCTC 61.151 72.222 0.00 0.00 38.24 5.03
322 323 3.151022 CTCGCCCAGGAGGAGGAC 61.151 72.222 0.00 0.00 38.24 3.85
323 324 3.663815 GACTCGCCCAGGAGGAGGA 62.664 68.421 10.48 0.00 38.39 3.71
324 325 3.151022 GACTCGCCCAGGAGGAGG 61.151 72.222 10.48 0.00 38.39 4.30
325 326 3.151022 GGACTCGCCCAGGAGGAG 61.151 72.222 5.43 5.43 38.39 3.69
326 327 3.317436 ATGGACTCGCCCAGGAGGA 62.317 63.158 0.00 0.00 39.97 3.71
327 328 2.765807 ATGGACTCGCCCAGGAGG 60.766 66.667 0.00 0.00 39.97 4.30
328 329 1.743321 GAGATGGACTCGCCCAGGAG 61.743 65.000 0.00 0.00 39.97 3.69
329 330 1.758514 GAGATGGACTCGCCCAGGA 60.759 63.158 0.00 0.00 39.97 3.86
330 331 2.801631 GGAGATGGACTCGCCCAGG 61.802 68.421 0.00 0.00 45.76 4.45
331 332 2.818132 GGAGATGGACTCGCCCAG 59.182 66.667 0.00 0.00 45.76 4.45
332 333 3.147595 CGGAGATGGACTCGCCCA 61.148 66.667 0.00 0.00 45.76 5.36
333 334 4.593864 GCGGAGATGGACTCGCCC 62.594 72.222 0.00 0.00 45.76 6.13
334 335 4.933064 CGCGGAGATGGACTCGCC 62.933 72.222 0.00 0.00 45.76 5.54
336 337 3.490793 ATGCGCGGAGATGGACTCG 62.491 63.158 8.83 0.00 45.76 4.18
337 338 1.663074 GATGCGCGGAGATGGACTC 60.663 63.158 8.83 0.00 44.24 3.36
338 339 2.419198 GATGCGCGGAGATGGACT 59.581 61.111 8.83 0.00 0.00 3.85
339 340 3.032609 CGATGCGCGGAGATGGAC 61.033 66.667 8.83 0.00 36.03 4.02
356 357 0.741221 GCAATGGAGACTCGGTGTCC 60.741 60.000 11.68 11.68 46.46 4.02
357 358 0.741221 GGCAATGGAGACTCGGTGTC 60.741 60.000 2.07 2.07 45.67 3.67
358 359 1.296715 GGCAATGGAGACTCGGTGT 59.703 57.895 0.00 0.00 0.00 4.16
359 360 0.107508 ATGGCAATGGAGACTCGGTG 60.108 55.000 0.00 0.00 0.00 4.94
360 361 0.107508 CATGGCAATGGAGACTCGGT 60.108 55.000 0.00 0.00 0.00 4.69
361 362 1.442526 GCATGGCAATGGAGACTCGG 61.443 60.000 2.54 0.00 34.09 4.63
362 363 1.442526 GGCATGGCAATGGAGACTCG 61.443 60.000 15.47 0.00 34.09 4.18
363 364 0.394762 TGGCATGGCAATGGAGACTC 60.395 55.000 21.13 0.00 34.09 3.36
364 365 0.682209 GTGGCATGGCAATGGAGACT 60.682 55.000 25.11 0.00 34.09 3.24
365 366 1.669999 GGTGGCATGGCAATGGAGAC 61.670 60.000 25.11 9.39 34.09 3.36
366 367 1.380246 GGTGGCATGGCAATGGAGA 60.380 57.895 25.11 0.00 34.09 3.71
367 368 2.777972 CGGTGGCATGGCAATGGAG 61.778 63.158 25.11 9.65 34.09 3.86
368 369 2.755064 CGGTGGCATGGCAATGGA 60.755 61.111 25.11 0.00 34.09 3.41
369 370 2.755064 TCGGTGGCATGGCAATGG 60.755 61.111 25.11 15.51 34.09 3.16
370 371 1.105167 ATCTCGGTGGCATGGCAATG 61.105 55.000 25.11 18.63 36.82 2.82
371 372 0.820891 GATCTCGGTGGCATGGCAAT 60.821 55.000 25.11 13.44 0.00 3.56
372 373 1.451927 GATCTCGGTGGCATGGCAA 60.452 57.895 25.11 8.44 0.00 4.52
373 374 2.190313 GATCTCGGTGGCATGGCA 59.810 61.111 19.43 19.43 0.00 4.92
374 375 2.592861 GGATCTCGGTGGCATGGC 60.593 66.667 13.29 13.29 0.00 4.40
375 376 2.280389 CGGATCTCGGTGGCATGG 60.280 66.667 0.00 0.00 34.75 3.66
376 377 2.969238 GCGGATCTCGGTGGCATG 60.969 66.667 0.00 0.00 39.69 4.06
377 378 4.241555 GGCGGATCTCGGTGGCAT 62.242 66.667 0.00 0.00 39.69 4.40
384 385 3.790334 TTGATGGCGGCGGATCTCG 62.790 63.158 9.78 0.00 42.76 4.04
385 386 1.302033 ATTGATGGCGGCGGATCTC 60.302 57.895 9.78 0.00 0.00 2.75
386 387 1.598962 CATTGATGGCGGCGGATCT 60.599 57.895 9.78 0.00 0.00 2.75
387 388 1.572085 CTCATTGATGGCGGCGGATC 61.572 60.000 9.78 3.18 0.00 3.36
388 389 1.598962 CTCATTGATGGCGGCGGAT 60.599 57.895 9.78 0.00 0.00 4.18
389 390 1.681486 TACTCATTGATGGCGGCGGA 61.681 55.000 9.78 0.00 0.00 5.54
390 391 0.813610 TTACTCATTGATGGCGGCGG 60.814 55.000 9.78 0.00 0.00 6.13
391 392 0.583438 CTTACTCATTGATGGCGGCG 59.417 55.000 0.51 0.51 0.00 6.46
392 393 1.953559 TCTTACTCATTGATGGCGGC 58.046 50.000 0.00 0.00 0.00 6.53
393 394 3.732212 TCATCTTACTCATTGATGGCGG 58.268 45.455 0.00 0.00 38.38 6.13
394 395 4.319333 GCTTCATCTTACTCATTGATGGCG 60.319 45.833 0.00 0.00 38.38 5.69
395 396 4.319333 CGCTTCATCTTACTCATTGATGGC 60.319 45.833 0.00 0.00 38.38 4.40
396 397 4.319333 GCGCTTCATCTTACTCATTGATGG 60.319 45.833 0.00 0.00 38.38 3.51
397 398 4.319333 GGCGCTTCATCTTACTCATTGATG 60.319 45.833 7.64 0.00 38.97 3.07
398 399 3.812053 GGCGCTTCATCTTACTCATTGAT 59.188 43.478 7.64 0.00 0.00 2.57
399 400 3.198068 GGCGCTTCATCTTACTCATTGA 58.802 45.455 7.64 0.00 0.00 2.57
400 401 2.938451 TGGCGCTTCATCTTACTCATTG 59.062 45.455 7.64 0.00 0.00 2.82
401 402 2.939103 GTGGCGCTTCATCTTACTCATT 59.061 45.455 7.64 0.00 0.00 2.57
402 403 2.169352 AGTGGCGCTTCATCTTACTCAT 59.831 45.455 7.64 0.00 0.00 2.90
403 404 1.550524 AGTGGCGCTTCATCTTACTCA 59.449 47.619 7.64 0.00 0.00 3.41
404 405 2.197577 GAGTGGCGCTTCATCTTACTC 58.802 52.381 7.64 5.27 0.00 2.59
405 406 1.134670 GGAGTGGCGCTTCATCTTACT 60.135 52.381 7.64 0.00 0.00 2.24
406 407 1.291132 GGAGTGGCGCTTCATCTTAC 58.709 55.000 7.64 0.00 0.00 2.34
407 408 0.901827 TGGAGTGGCGCTTCATCTTA 59.098 50.000 4.55 0.00 0.00 2.10
408 409 0.254178 ATGGAGTGGCGCTTCATCTT 59.746 50.000 16.14 0.00 39.15 2.40
409 410 1.910722 ATGGAGTGGCGCTTCATCT 59.089 52.632 16.14 0.00 39.15 2.90
410 411 4.547859 ATGGAGTGGCGCTTCATC 57.452 55.556 16.14 0.21 39.15 2.92
411 412 0.035152 TTGATGGAGTGGCGCTTCAT 60.035 50.000 21.54 21.54 45.88 2.57
412 413 0.250684 TTTGATGGAGTGGCGCTTCA 60.251 50.000 12.21 12.21 37.07 3.02
413 414 0.449388 CTTTGATGGAGTGGCGCTTC 59.551 55.000 7.64 0.00 0.00 3.86
414 415 0.036732 TCTTTGATGGAGTGGCGCTT 59.963 50.000 7.64 0.00 0.00 4.68
415 416 0.036732 TTCTTTGATGGAGTGGCGCT 59.963 50.000 7.64 0.00 0.00 5.92
416 417 0.449388 CTTCTTTGATGGAGTGGCGC 59.551 55.000 0.00 0.00 0.00 6.53
417 418 0.449388 GCTTCTTTGATGGAGTGGCG 59.551 55.000 0.00 0.00 0.00 5.69
418 419 0.813821 GGCTTCTTTGATGGAGTGGC 59.186 55.000 0.00 0.00 0.00 5.01
419 420 1.089920 CGGCTTCTTTGATGGAGTGG 58.910 55.000 0.00 0.00 0.00 4.00
420 421 1.734465 GACGGCTTCTTTGATGGAGTG 59.266 52.381 0.00 0.00 0.00 3.51
421 422 1.339151 GGACGGCTTCTTTGATGGAGT 60.339 52.381 0.00 0.00 0.00 3.85
422 423 1.339055 TGGACGGCTTCTTTGATGGAG 60.339 52.381 0.00 0.00 0.00 3.86
423 424 0.690192 TGGACGGCTTCTTTGATGGA 59.310 50.000 0.00 0.00 0.00 3.41
424 425 0.804989 GTGGACGGCTTCTTTGATGG 59.195 55.000 0.00 0.00 0.00 3.51
425 426 0.804989 GGTGGACGGCTTCTTTGATG 59.195 55.000 0.00 0.00 0.00 3.07
426 427 0.673644 CGGTGGACGGCTTCTTTGAT 60.674 55.000 0.00 0.00 39.42 2.57
427 428 1.301401 CGGTGGACGGCTTCTTTGA 60.301 57.895 0.00 0.00 39.42 2.69
428 429 1.291877 CTCGGTGGACGGCTTCTTTG 61.292 60.000 0.00 0.00 44.45 2.77
429 430 1.004918 CTCGGTGGACGGCTTCTTT 60.005 57.895 0.00 0.00 44.45 2.52
430 431 1.258445 ATCTCGGTGGACGGCTTCTT 61.258 55.000 0.00 0.00 44.45 2.52
431 432 1.668101 GATCTCGGTGGACGGCTTCT 61.668 60.000 0.00 0.00 44.45 2.85
432 433 1.227002 GATCTCGGTGGACGGCTTC 60.227 63.158 0.00 0.00 44.45 3.86
433 434 2.722201 GGATCTCGGTGGACGGCTT 61.722 63.158 0.00 0.00 44.45 4.35
434 435 3.148279 GGATCTCGGTGGACGGCT 61.148 66.667 0.00 0.00 44.45 5.52
435 436 4.570663 CGGATCTCGGTGGACGGC 62.571 72.222 0.00 0.00 44.45 5.68
436 437 4.570663 GCGGATCTCGGTGGACGG 62.571 72.222 5.87 0.00 44.45 4.79
437 438 4.570663 GGCGGATCTCGGTGGACG 62.571 72.222 5.87 0.00 46.11 4.79
438 439 4.570663 CGGCGGATCTCGGTGGAC 62.571 72.222 0.00 0.00 39.69 4.02
444 445 3.790334 TTGATGGCGGCGGATCTCG 62.790 63.158 9.78 0.00 42.76 4.04
445 446 1.302033 ATTGATGGCGGCGGATCTC 60.302 57.895 9.78 0.00 0.00 2.75
446 447 1.598962 CATTGATGGCGGCGGATCT 60.599 57.895 9.78 0.00 0.00 2.75
447 448 1.572085 CTCATTGATGGCGGCGGATC 61.572 60.000 9.78 3.18 0.00 3.36
448 449 1.598962 CTCATTGATGGCGGCGGAT 60.599 57.895 9.78 0.00 0.00 4.18
449 450 2.203056 CTCATTGATGGCGGCGGA 60.203 61.111 9.78 0.00 0.00 5.54
450 451 3.957535 GCTCATTGATGGCGGCGG 61.958 66.667 9.78 0.00 0.00 6.13
451 452 2.657484 CTTGCTCATTGATGGCGGCG 62.657 60.000 0.51 0.51 0.00 6.46
452 453 1.065273 CTTGCTCATTGATGGCGGC 59.935 57.895 0.00 0.00 0.00 6.53
453 454 1.315690 ATCTTGCTCATTGATGGCGG 58.684 50.000 0.00 0.00 0.00 6.13
454 455 3.113322 CAAATCTTGCTCATTGATGGCG 58.887 45.455 0.00 0.00 0.00 5.69
455 456 4.360563 CTCAAATCTTGCTCATTGATGGC 58.639 43.478 0.00 0.00 31.92 4.40
456 457 4.643334 TCCTCAAATCTTGCTCATTGATGG 59.357 41.667 0.00 0.00 31.92 3.51
457 458 5.357314 ACTCCTCAAATCTTGCTCATTGATG 59.643 40.000 0.00 0.00 31.92 3.07
458 459 5.357314 CACTCCTCAAATCTTGCTCATTGAT 59.643 40.000 0.00 0.00 31.92 2.57
459 460 4.698780 CACTCCTCAAATCTTGCTCATTGA 59.301 41.667 0.00 0.00 0.00 2.57
460 461 4.458295 ACACTCCTCAAATCTTGCTCATTG 59.542 41.667 0.00 0.00 0.00 2.82
461 462 4.660168 ACACTCCTCAAATCTTGCTCATT 58.340 39.130 0.00 0.00 0.00 2.57
462 463 4.298103 ACACTCCTCAAATCTTGCTCAT 57.702 40.909 0.00 0.00 0.00 2.90
463 464 3.777106 ACACTCCTCAAATCTTGCTCA 57.223 42.857 0.00 0.00 0.00 4.26
464 465 4.276926 ACAAACACTCCTCAAATCTTGCTC 59.723 41.667 0.00 0.00 0.00 4.26
465 466 4.210331 ACAAACACTCCTCAAATCTTGCT 58.790 39.130 0.00 0.00 0.00 3.91
466 467 4.540824 GACAAACACTCCTCAAATCTTGC 58.459 43.478 0.00 0.00 0.00 4.01
520 521 6.751514 AGTGAACATATGTTTCGCCATAAA 57.248 33.333 21.63 0.00 38.56 1.40
526 527 4.189231 AGGGTAGTGAACATATGTTTCGC 58.811 43.478 21.63 18.79 38.56 4.70
654 673 7.707624 TGCTTAGCCTACAAGTTAGTACTTA 57.292 36.000 0.00 0.00 42.67 2.24
655 674 6.600882 TGCTTAGCCTACAAGTTAGTACTT 57.399 37.500 0.00 0.00 45.40 2.24
656 675 6.600882 TTGCTTAGCCTACAAGTTAGTACT 57.399 37.500 0.29 0.00 35.68 2.73
657 676 6.091849 GGTTTGCTTAGCCTACAAGTTAGTAC 59.908 42.308 0.29 0.00 0.00 2.73
660 679 5.001232 TGGTTTGCTTAGCCTACAAGTTAG 58.999 41.667 0.29 0.00 0.00 2.34
670 692 1.605457 GCTGGTTTGGTTTGCTTAGCC 60.605 52.381 0.29 0.00 0.00 3.93
709 731 2.470196 TAGAAGTACGTCTCGCATGC 57.530 50.000 14.88 7.91 0.00 4.06
736 758 5.687166 AGAACGGTAAAATGTAGGATGGA 57.313 39.130 0.00 0.00 0.00 3.41
737 759 5.296035 GGAAGAACGGTAAAATGTAGGATGG 59.704 44.000 0.00 0.00 0.00 3.51
738 760 5.296035 GGGAAGAACGGTAAAATGTAGGATG 59.704 44.000 0.00 0.00 0.00 3.51
744 766 4.070009 GTCTGGGAAGAACGGTAAAATGT 58.930 43.478 0.00 0.00 0.00 2.71
808 830 2.342948 CCGTGTTGTTTTGTTTGGTTCG 59.657 45.455 0.00 0.00 0.00 3.95
809 831 3.576648 TCCGTGTTGTTTTGTTTGGTTC 58.423 40.909 0.00 0.00 0.00 3.62
858 880 4.387862 CAGATGAATTTTGTTTCTGGCTGC 59.612 41.667 0.00 0.00 32.14 5.25
875 897 6.603201 GGAAGTTTCATTGGGATTACAGATGA 59.397 38.462 0.00 0.00 0.00 2.92
943 973 7.118723 AGCCTTTGATGAATGTCTATGGTTTA 58.881 34.615 0.00 0.00 0.00 2.01
950 981 6.475504 TCTTCAAGCCTTTGATGAATGTCTA 58.524 36.000 2.84 0.00 42.60 2.59
970 1001 2.558313 GCTGGTGCGTGCTTCTTC 59.442 61.111 0.00 0.00 0.00 2.87
1347 1378 4.254709 TTGTCCGCCTGCAGCACT 62.255 61.111 8.66 0.00 44.04 4.40
1351 1382 2.281761 AACCTTGTCCGCCTGCAG 60.282 61.111 6.78 6.78 0.00 4.41
1368 1399 1.511318 CGAATTGGGGCGTGAACACA 61.511 55.000 5.80 0.00 0.00 3.72
1488 1519 0.967380 CCGAGCTGGCCCTGATTTTT 60.967 55.000 0.00 0.00 0.00 1.94
1624 1655 1.806542 CAGTTCTTGATTGACACCCGG 59.193 52.381 0.00 0.00 0.00 5.73
1625 1656 2.224079 CACAGTTCTTGATTGACACCCG 59.776 50.000 0.00 0.00 0.00 5.28
1626 1657 2.554032 CCACAGTTCTTGATTGACACCC 59.446 50.000 0.00 0.00 0.00 4.61
1627 1658 2.554032 CCCACAGTTCTTGATTGACACC 59.446 50.000 0.00 0.00 0.00 4.16
1730 1764 9.901724 CTTAAAAATGTTGACTACGTAGCATAG 57.098 33.333 22.40 7.62 0.00 2.23
1788 1822 2.408032 CACAAATTCGGAAACATTGGCG 59.592 45.455 14.59 5.85 0.00 5.69
1826 1860 8.725148 TGAAGAACATCTCTTATTTTTCTCTGC 58.275 33.333 0.00 0.00 44.82 4.26
1885 1922 1.330521 TGTCAAGAACAAGCAACGAGC 59.669 47.619 0.00 0.00 36.77 5.03
1887 1924 4.123506 TGTATGTCAAGAACAAGCAACGA 58.876 39.130 0.00 0.00 42.37 3.85
1904 1941 9.424659 GCTGTTTGTTTTTCAAGAATTTGTATG 57.575 29.630 0.00 0.00 37.35 2.39
1938 1975 5.163754 CGAATTTTTGGGCTAGTACTTGAGG 60.164 44.000 8.60 0.00 0.00 3.86
1944 1981 4.933400 TGTCTCGAATTTTTGGGCTAGTAC 59.067 41.667 0.00 0.00 0.00 2.73
1955 1992 5.907391 GTGACGATTTGTTGTCTCGAATTTT 59.093 36.000 0.00 0.00 36.10 1.82
2001 2038 9.084164 GGCGTTAATGTTATTACATCGAGATAT 57.916 33.333 8.16 0.00 44.14 1.63
2002 2039 7.543172 GGGCGTTAATGTTATTACATCGAGATA 59.457 37.037 8.16 0.00 44.14 1.98
2003 2040 6.367969 GGGCGTTAATGTTATTACATCGAGAT 59.632 38.462 8.16 0.00 44.14 2.75
2004 2041 5.693104 GGGCGTTAATGTTATTACATCGAGA 59.307 40.000 8.16 0.00 44.14 4.04
2020 2128 2.291024 TGAAGCTTAATGGGGGCGTTAA 60.291 45.455 0.00 0.00 0.00 2.01
2021 2129 1.282447 TGAAGCTTAATGGGGGCGTTA 59.718 47.619 0.00 0.00 0.00 3.18
2022 2130 0.039035 TGAAGCTTAATGGGGGCGTT 59.961 50.000 0.00 0.00 0.00 4.84
2023 2131 0.039035 TTGAAGCTTAATGGGGGCGT 59.961 50.000 0.00 0.00 0.00 5.68
2024 2132 1.402787 ATTGAAGCTTAATGGGGGCG 58.597 50.000 0.00 0.00 0.00 6.13
2025 2133 2.103094 GGAATTGAAGCTTAATGGGGGC 59.897 50.000 0.00 0.00 0.00 5.80
2032 2140 5.560724 ACTAGTGCTGGAATTGAAGCTTAA 58.439 37.500 0.00 0.00 40.21 1.85
2077 2199 7.359181 CGTTTCTTGATCATTTTTAAAGTGGGC 60.359 37.037 0.00 0.00 0.00 5.36
2139 2261 3.730761 GGCAGCAGCAGTTGTCCG 61.731 66.667 2.65 0.00 44.61 4.79
2140 2262 1.737355 TTTGGCAGCAGCAGTTGTCC 61.737 55.000 2.65 0.00 44.61 4.02
2170 2295 2.391389 CGGCGGCCTTCTTCTTGAC 61.391 63.158 18.34 0.00 0.00 3.18
2342 2467 1.377856 GCCAGGGAGAAGTTGAGCC 60.378 63.158 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.