Multiple sequence alignment - TraesCS2B01G177900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G177900 | chr2B | 100.000 | 3513 | 0 | 0 | 1 | 3513 | 152845722 | 152842210 | 0.000000e+00 | 6488 |
1 | TraesCS2B01G177900 | chr2B | 84.352 | 933 | 57 | 36 | 758 | 1655 | 153127420 | 153126542 | 0.000000e+00 | 832 |
2 | TraesCS2B01G177900 | chr2B | 91.774 | 389 | 15 | 12 | 214 | 588 | 153127975 | 153127590 | 3.110000e-145 | 525 |
3 | TraesCS2B01G177900 | chr2B | 88.732 | 284 | 18 | 7 | 1836 | 2109 | 153126534 | 153126255 | 5.620000e-88 | 335 |
4 | TraesCS2B01G177900 | chr2A | 88.824 | 1709 | 91 | 55 | 1 | 1654 | 100827460 | 100825797 | 0.000000e+00 | 2006 |
5 | TraesCS2B01G177900 | chr2A | 90.879 | 1502 | 70 | 15 | 1824 | 3265 | 100825802 | 100824308 | 0.000000e+00 | 1953 |
6 | TraesCS2B01G177900 | chr2A | 88.528 | 462 | 37 | 8 | 1823 | 2272 | 100971267 | 100970810 | 2.380000e-151 | 545 |
7 | TraesCS2B01G177900 | chr2A | 85.024 | 414 | 38 | 12 | 1245 | 1654 | 100971654 | 100971261 | 1.960000e-107 | 399 |
8 | TraesCS2B01G177900 | chr2A | 90.203 | 296 | 19 | 7 | 854 | 1149 | 100971981 | 100971696 | 9.200000e-101 | 377 |
9 | TraesCS2B01G177900 | chr2A | 94.298 | 228 | 12 | 1 | 3287 | 3513 | 767386154 | 767385927 | 7.220000e-92 | 348 |
10 | TraesCS2B01G177900 | chr2A | 83.333 | 180 | 14 | 6 | 334 | 497 | 100972754 | 100972575 | 6.070000e-33 | 152 |
11 | TraesCS2B01G177900 | chr2A | 98.246 | 57 | 1 | 0 | 529 | 585 | 100972572 | 100972516 | 2.230000e-17 | 100 |
12 | TraesCS2B01G177900 | chr2D | 91.638 | 1471 | 57 | 22 | 1822 | 3265 | 101872603 | 101871172 | 0.000000e+00 | 1975 |
13 | TraesCS2B01G177900 | chr2D | 88.485 | 1129 | 61 | 32 | 177 | 1266 | 101874045 | 101872947 | 0.000000e+00 | 1301 |
14 | TraesCS2B01G177900 | chr2D | 90.260 | 462 | 30 | 7 | 1823 | 2272 | 101956342 | 101955884 | 1.090000e-164 | 590 |
15 | TraesCS2B01G177900 | chr2D | 94.611 | 334 | 10 | 4 | 1329 | 1654 | 101872929 | 101872596 | 8.700000e-141 | 510 |
16 | TraesCS2B01G177900 | chr2D | 84.450 | 418 | 48 | 12 | 1239 | 1654 | 101956738 | 101956336 | 2.540000e-106 | 396 |
17 | TraesCS2B01G177900 | chr2D | 88.851 | 296 | 23 | 6 | 854 | 1149 | 101957059 | 101956774 | 4.310000e-94 | 355 |
18 | TraesCS2B01G177900 | chr7B | 93.651 | 252 | 14 | 1 | 3264 | 3513 | 111324907 | 111324656 | 3.310000e-100 | 375 |
19 | TraesCS2B01G177900 | chr7B | 93.033 | 244 | 16 | 1 | 3271 | 3513 | 97922935 | 97922692 | 4.310000e-94 | 355 |
20 | TraesCS2B01G177900 | chr7B | 96.685 | 181 | 4 | 2 | 1644 | 1823 | 699933415 | 699933594 | 2.050000e-77 | 300 |
21 | TraesCS2B01G177900 | chr7B | 89.865 | 148 | 14 | 1 | 1374 | 1520 | 452961926 | 452962073 | 4.630000e-44 | 189 |
22 | TraesCS2B01G177900 | chr7B | 85.915 | 142 | 17 | 3 | 997 | 1136 | 452961691 | 452961831 | 7.860000e-32 | 148 |
23 | TraesCS2B01G177900 | chr7B | 86.923 | 130 | 17 | 0 | 1516 | 1645 | 452962139 | 452962268 | 2.830000e-31 | 147 |
24 | TraesCS2B01G177900 | chr5B | 96.491 | 228 | 7 | 1 | 3287 | 3513 | 64728255 | 64728028 | 3.310000e-100 | 375 |
25 | TraesCS2B01G177900 | chr5B | 93.805 | 226 | 14 | 0 | 3288 | 3513 | 571880836 | 571880611 | 1.210000e-89 | 340 |
26 | TraesCS2B01G177900 | chr4B | 95.595 | 227 | 10 | 0 | 3287 | 3513 | 665148936 | 665148710 | 7.170000e-97 | 364 |
27 | TraesCS2B01G177900 | chr7A | 94.690 | 226 | 11 | 1 | 3289 | 3513 | 7830727 | 7830952 | 2.010000e-92 | 350 |
28 | TraesCS2B01G177900 | chr7A | 90.780 | 141 | 12 | 1 | 1381 | 1520 | 486237288 | 486237148 | 1.660000e-43 | 187 |
29 | TraesCS2B01G177900 | chr7A | 88.976 | 127 | 14 | 0 | 1519 | 1645 | 486237078 | 486236952 | 1.310000e-34 | 158 |
30 | TraesCS2B01G177900 | chr7A | 85.211 | 142 | 18 | 3 | 997 | 1136 | 486237571 | 486237431 | 3.660000e-30 | 143 |
31 | TraesCS2B01G177900 | chr5A | 94.298 | 228 | 12 | 1 | 3287 | 3513 | 561118161 | 561118388 | 7.220000e-92 | 348 |
32 | TraesCS2B01G177900 | chr5A | 100.000 | 168 | 0 | 0 | 1655 | 1822 | 622194168 | 622194335 | 9.470000e-81 | 311 |
33 | TraesCS2B01G177900 | chr5A | 97.701 | 174 | 4 | 0 | 1655 | 1828 | 476123812 | 476123639 | 2.050000e-77 | 300 |
34 | TraesCS2B01G177900 | chr5A | 95.699 | 186 | 7 | 1 | 1646 | 1831 | 702454311 | 702454495 | 7.370000e-77 | 298 |
35 | TraesCS2B01G177900 | chr4A | 93.805 | 226 | 13 | 1 | 3289 | 3513 | 638721558 | 638721783 | 4.340000e-89 | 339 |
36 | TraesCS2B01G177900 | chr1A | 98.851 | 174 | 2 | 0 | 1648 | 1821 | 561526813 | 561526986 | 9.470000e-81 | 311 |
37 | TraesCS2B01G177900 | chr1A | 84.800 | 125 | 19 | 0 | 1397 | 1521 | 66892813 | 66892937 | 3.680000e-25 | 126 |
38 | TraesCS2B01G177900 | chr5D | 96.774 | 186 | 4 | 2 | 1647 | 1831 | 412360967 | 412360783 | 3.410000e-80 | 309 |
39 | TraesCS2B01G177900 | chr5D | 96.703 | 182 | 4 | 2 | 1651 | 1831 | 493835499 | 493835319 | 5.700000e-78 | 302 |
40 | TraesCS2B01G177900 | chr7D | 97.238 | 181 | 3 | 2 | 1649 | 1828 | 569602918 | 569602739 | 4.410000e-79 | 305 |
41 | TraesCS2B01G177900 | chr7D | 89.189 | 148 | 15 | 1 | 1374 | 1520 | 436114181 | 436114328 | 2.150000e-42 | 183 |
42 | TraesCS2B01G177900 | chr7D | 85.915 | 142 | 17 | 3 | 997 | 1136 | 436113959 | 436114099 | 7.860000e-32 | 148 |
43 | TraesCS2B01G177900 | chr7D | 86.923 | 130 | 17 | 0 | 1516 | 1645 | 436114395 | 436114524 | 2.830000e-31 | 147 |
44 | TraesCS2B01G177900 | chr7D | 82.031 | 128 | 19 | 4 | 1396 | 1521 | 165634967 | 165635092 | 4.800000e-19 | 106 |
45 | TraesCS2B01G177900 | chr1D | 96.685 | 181 | 4 | 2 | 1647 | 1826 | 475111178 | 475110999 | 2.050000e-77 | 300 |
46 | TraesCS2B01G177900 | chr1D | 84.000 | 125 | 20 | 0 | 1397 | 1521 | 68446388 | 68446512 | 1.710000e-23 | 121 |
47 | TraesCS2B01G177900 | chr4D | 87.952 | 249 | 8 | 7 | 284 | 517 | 498413818 | 498413577 | 1.240000e-69 | 274 |
48 | TraesCS2B01G177900 | chr3D | 91.509 | 106 | 9 | 0 | 1395 | 1500 | 352367935 | 352367830 | 2.830000e-31 | 147 |
49 | TraesCS2B01G177900 | chr3A | 90.566 | 106 | 10 | 0 | 1395 | 1500 | 470829751 | 470829646 | 1.310000e-29 | 141 |
50 | TraesCS2B01G177900 | chr1B | 89.247 | 93 | 10 | 0 | 1397 | 1489 | 109728747 | 109728839 | 2.220000e-22 | 117 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G177900 | chr2B | 152842210 | 152845722 | 3512 | True | 6488.0 | 6488 | 100.000000 | 1 | 3513 | 1 | chr2B.!!$R1 | 3512 |
1 | TraesCS2B01G177900 | chr2B | 153126255 | 153127975 | 1720 | True | 564.0 | 832 | 88.286000 | 214 | 2109 | 3 | chr2B.!!$R2 | 1895 |
2 | TraesCS2B01G177900 | chr2A | 100824308 | 100827460 | 3152 | True | 1979.5 | 2006 | 89.851500 | 1 | 3265 | 2 | chr2A.!!$R2 | 3264 |
3 | TraesCS2B01G177900 | chr2A | 100970810 | 100972754 | 1944 | True | 314.6 | 545 | 89.066800 | 334 | 2272 | 5 | chr2A.!!$R3 | 1938 |
4 | TraesCS2B01G177900 | chr2D | 101871172 | 101874045 | 2873 | True | 1262.0 | 1975 | 91.578000 | 177 | 3265 | 3 | chr2D.!!$R1 | 3088 |
5 | TraesCS2B01G177900 | chr2D | 101955884 | 101957059 | 1175 | True | 447.0 | 590 | 87.853667 | 854 | 2272 | 3 | chr2D.!!$R2 | 1418 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
974 | 1402 | 0.104304 | AGCTTTGGTTCACGTCGTCT | 59.896 | 50.0 | 0.00 | 0.00 | 0.0 | 4.18 | F |
979 | 1407 | 0.309922 | TGGTTCACGTCGTCTCAGTC | 59.690 | 55.0 | 0.00 | 0.00 | 0.0 | 3.51 | F |
1813 | 2281 | 0.107214 | TGGCATGTTGGGCTAGCTAC | 60.107 | 55.0 | 15.72 | 10.98 | 0.0 | 3.58 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1794 | 2262 | 0.107214 | GTAGCTAGCCCAACATGCCA | 60.107 | 55.0 | 12.13 | 0.00 | 0.00 | 4.92 | R |
2359 | 2855 | 0.827925 | AGTCGGACCACTTGAGCTCA | 60.828 | 55.0 | 13.74 | 13.74 | 0.00 | 4.26 | R |
3445 | 3989 | 0.035176 | GCATCTCAGCCAGAGGATCC | 59.965 | 60.0 | 2.48 | 2.48 | 44.81 | 3.36 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
57 | 58 | 5.547465 | ACTGTTGAATGACCGACAGAAATA | 58.453 | 37.500 | 15.79 | 0.00 | 46.57 | 1.40 |
62 | 63 | 7.441157 | TGTTGAATGACCGACAGAAATATATCC | 59.559 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
63 | 64 | 7.061566 | TGAATGACCGACAGAAATATATCCA | 57.938 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
66 | 67 | 6.664428 | TGACCGACAGAAATATATCCATCA | 57.336 | 37.500 | 0.00 | 0.00 | 0.00 | 3.07 |
67 | 68 | 7.244886 | TGACCGACAGAAATATATCCATCAT | 57.755 | 36.000 | 0.00 | 0.00 | 0.00 | 2.45 |
68 | 69 | 7.679783 | TGACCGACAGAAATATATCCATCATT | 58.320 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
69 | 70 | 7.819415 | TGACCGACAGAAATATATCCATCATTC | 59.181 | 37.037 | 0.00 | 0.00 | 0.00 | 2.67 |
70 | 71 | 7.679783 | ACCGACAGAAATATATCCATCATTCA | 58.320 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
71 | 72 | 7.821359 | ACCGACAGAAATATATCCATCATTCAG | 59.179 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
72 | 73 | 7.821359 | CCGACAGAAATATATCCATCATTCAGT | 59.179 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
109 | 110 | 5.527951 | TGACACTGTCAATAAATGTTTGCC | 58.472 | 37.500 | 9.54 | 0.00 | 39.78 | 4.52 |
112 | 113 | 7.040132 | TGACACTGTCAATAAATGTTTGCCATA | 60.040 | 33.333 | 9.54 | 0.00 | 39.78 | 2.74 |
113 | 114 | 7.839907 | ACACTGTCAATAAATGTTTGCCATAT | 58.160 | 30.769 | 0.00 | 0.00 | 31.97 | 1.78 |
115 | 116 | 7.436080 | CACTGTCAATAAATGTTTGCCATATCC | 59.564 | 37.037 | 0.00 | 0.00 | 31.97 | 2.59 |
125 | 129 | 4.136796 | GTTTGCCATATCCTCTACATGCA | 58.863 | 43.478 | 0.00 | 0.00 | 0.00 | 3.96 |
139 | 143 | 6.095300 | CCTCTACATGCATGAATAACCAAACA | 59.905 | 38.462 | 32.75 | 2.60 | 0.00 | 2.83 |
170 | 174 | 7.275888 | TGTTTACTTGATTGAGACATTGCTT | 57.724 | 32.000 | 0.00 | 0.00 | 0.00 | 3.91 |
171 | 175 | 7.715657 | TGTTTACTTGATTGAGACATTGCTTT | 58.284 | 30.769 | 0.00 | 0.00 | 0.00 | 3.51 |
190 | 194 | 4.386954 | GCTTTAAAGTGACACGTACCCTAC | 59.613 | 45.833 | 16.38 | 0.00 | 0.00 | 3.18 |
209 | 213 | 4.641989 | CCTACATTGACAGGAATTGAAGGG | 59.358 | 45.833 | 3.80 | 0.00 | 33.42 | 3.95 |
210 | 214 | 2.827921 | ACATTGACAGGAATTGAAGGGC | 59.172 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
211 | 215 | 1.923356 | TTGACAGGAATTGAAGGGCC | 58.077 | 50.000 | 0.00 | 0.00 | 0.00 | 5.80 |
212 | 216 | 0.322456 | TGACAGGAATTGAAGGGCCG | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
254 | 260 | 2.485479 | GGTTCATATGCGTGGTGGAGAT | 60.485 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
255 | 261 | 2.531522 | TCATATGCGTGGTGGAGATG | 57.468 | 50.000 | 0.00 | 0.00 | 38.80 | 2.90 |
256 | 262 | 0.870393 | CATATGCGTGGTGGAGATGC | 59.130 | 55.000 | 0.00 | 0.00 | 30.75 | 3.91 |
257 | 263 | 0.469494 | ATATGCGTGGTGGAGATGCA | 59.531 | 50.000 | 0.00 | 0.00 | 39.60 | 3.96 |
266 | 275 | 4.574421 | CGTGGTGGAGATGCAAATTACATA | 59.426 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
271 | 280 | 6.016777 | GGTGGAGATGCAAATTACATAAGAGG | 60.017 | 42.308 | 0.00 | 0.00 | 0.00 | 3.69 |
275 | 288 | 4.875544 | TGCAAATTACATAAGAGGCGAC | 57.124 | 40.909 | 0.00 | 0.00 | 0.00 | 5.19 |
276 | 289 | 4.257731 | TGCAAATTACATAAGAGGCGACA | 58.742 | 39.130 | 0.00 | 0.00 | 0.00 | 4.35 |
277 | 290 | 4.881273 | TGCAAATTACATAAGAGGCGACAT | 59.119 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
278 | 291 | 5.207768 | GCAAATTACATAAGAGGCGACATG | 58.792 | 41.667 | 0.00 | 0.00 | 0.00 | 3.21 |
279 | 292 | 5.007626 | GCAAATTACATAAGAGGCGACATGA | 59.992 | 40.000 | 0.00 | 0.00 | 0.00 | 3.07 |
280 | 293 | 6.422223 | CAAATTACATAAGAGGCGACATGAC | 58.578 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
281 | 294 | 4.729227 | TTACATAAGAGGCGACATGACA | 57.271 | 40.909 | 0.00 | 0.00 | 0.00 | 3.58 |
282 | 295 | 3.827008 | ACATAAGAGGCGACATGACAT | 57.173 | 42.857 | 0.00 | 0.00 | 0.00 | 3.06 |
323 | 338 | 1.067199 | GCTCAATTGCTTGCGTTCCG | 61.067 | 55.000 | 0.00 | 0.00 | 32.11 | 4.30 |
590 | 883 | 3.636043 | GCCCACACACACACGACG | 61.636 | 66.667 | 0.00 | 0.00 | 0.00 | 5.12 |
684 | 1062 | 2.718993 | GATGAGAGAGTACGCCGGCG | 62.719 | 65.000 | 44.88 | 44.88 | 46.03 | 6.46 |
708 | 1086 | 1.135333 | GTACTGACACTGGCTAGCTCC | 59.865 | 57.143 | 15.72 | 0.00 | 0.00 | 4.70 |
713 | 1097 | 2.041405 | ACTGGCTAGCTCCCTCCC | 60.041 | 66.667 | 15.72 | 0.00 | 0.00 | 4.30 |
966 | 1394 | 1.165907 | CGCCACTGAGCTTTGGTTCA | 61.166 | 55.000 | 10.66 | 0.00 | 35.09 | 3.18 |
970 | 1398 | 1.261619 | CACTGAGCTTTGGTTCACGTC | 59.738 | 52.381 | 0.00 | 0.00 | 0.00 | 4.34 |
971 | 1399 | 0.508641 | CTGAGCTTTGGTTCACGTCG | 59.491 | 55.000 | 0.00 | 0.00 | 0.00 | 5.12 |
972 | 1400 | 0.179094 | TGAGCTTTGGTTCACGTCGT | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
973 | 1401 | 0.507358 | GAGCTTTGGTTCACGTCGTC | 59.493 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
974 | 1402 | 0.104304 | AGCTTTGGTTCACGTCGTCT | 59.896 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
975 | 1403 | 0.507358 | GCTTTGGTTCACGTCGTCTC | 59.493 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
976 | 1404 | 1.847818 | CTTTGGTTCACGTCGTCTCA | 58.152 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
977 | 1405 | 1.787155 | CTTTGGTTCACGTCGTCTCAG | 59.213 | 52.381 | 0.00 | 0.00 | 0.00 | 3.35 |
978 | 1406 | 0.742505 | TTGGTTCACGTCGTCTCAGT | 59.257 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
979 | 1407 | 0.309922 | TGGTTCACGTCGTCTCAGTC | 59.690 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
990 | 1418 | 0.806241 | GTCTCAGTCCGTCTCAGTCC | 59.194 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1233 | 1682 | 2.932614 | GTCAGTTATGCTAGTGCCACTG | 59.067 | 50.000 | 7.83 | 0.00 | 39.80 | 3.66 |
1235 | 1684 | 2.674852 | CAGTTATGCTAGTGCCACTGTG | 59.325 | 50.000 | 7.83 | 0.00 | 36.65 | 3.66 |
1242 | 1691 | 2.160417 | GCTAGTGCCACTGTGACATTTC | 59.840 | 50.000 | 7.83 | 0.00 | 0.00 | 2.17 |
1277 | 1726 | 4.636206 | AGAGATGGTTTCCTTTTATGCGAC | 59.364 | 41.667 | 0.00 | 0.00 | 0.00 | 5.19 |
1286 | 1735 | 4.904116 | TCCTTTTATGCGACGCAATTAAG | 58.096 | 39.130 | 28.24 | 25.02 | 43.62 | 1.85 |
1297 | 1746 | 4.318071 | CGACGCAATTAAGTGACAATGTTG | 59.682 | 41.667 | 7.18 | 0.00 | 0.00 | 3.33 |
1299 | 1748 | 4.975502 | ACGCAATTAAGTGACAATGTTGTG | 59.024 | 37.500 | 7.18 | 0.00 | 42.43 | 3.33 |
1302 | 1751 | 5.976534 | GCAATTAAGTGACAATGTTGTGTGA | 59.023 | 36.000 | 7.18 | 0.00 | 42.43 | 3.58 |
1303 | 1752 | 6.475076 | GCAATTAAGTGACAATGTTGTGTGAA | 59.525 | 34.615 | 7.18 | 0.00 | 42.43 | 3.18 |
1304 | 1753 | 7.306167 | GCAATTAAGTGACAATGTTGTGTGAAG | 60.306 | 37.037 | 7.18 | 0.00 | 42.43 | 3.02 |
1305 | 1754 | 6.993786 | TTAAGTGACAATGTTGTGTGAAGA | 57.006 | 33.333 | 2.65 | 0.00 | 42.43 | 2.87 |
1306 | 1755 | 4.882671 | AGTGACAATGTTGTGTGAAGAC | 57.117 | 40.909 | 2.65 | 0.00 | 42.43 | 3.01 |
1307 | 1756 | 4.260985 | AGTGACAATGTTGTGTGAAGACA | 58.739 | 39.130 | 2.65 | 0.00 | 42.43 | 3.41 |
1323 | 1772 | 7.806690 | TGTGAAGACACTGATTAGCAAATTAC | 58.193 | 34.615 | 0.00 | 0.00 | 46.07 | 1.89 |
1325 | 1774 | 8.171840 | GTGAAGACACTGATTAGCAAATTACTC | 58.828 | 37.037 | 0.00 | 0.00 | 42.99 | 2.59 |
1327 | 1781 | 8.798859 | AAGACACTGATTAGCAAATTACTCAT | 57.201 | 30.769 | 0.00 | 0.00 | 0.00 | 2.90 |
1363 | 1820 | 5.128499 | TGCCAATTTGATGGAATTAATCGGT | 59.872 | 36.000 | 0.00 | 0.00 | 43.54 | 4.69 |
1367 | 1824 | 8.389603 | CCAATTTGATGGAATTAATCGGTTTTG | 58.610 | 33.333 | 0.00 | 0.00 | 43.54 | 2.44 |
1500 | 1962 | 2.053244 | GACCTCATCATCCACCTCCAT | 58.947 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
1670 | 2138 | 1.367840 | GCCAGTGGCGTATCTAGGG | 59.632 | 63.158 | 20.55 | 0.00 | 39.62 | 3.53 |
1671 | 2139 | 2.050269 | CCAGTGGCGTATCTAGGGG | 58.950 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
1672 | 2140 | 1.472662 | CCAGTGGCGTATCTAGGGGG | 61.473 | 65.000 | 0.00 | 0.00 | 0.00 | 5.40 |
1673 | 2141 | 0.759436 | CAGTGGCGTATCTAGGGGGT | 60.759 | 60.000 | 0.00 | 0.00 | 0.00 | 4.95 |
1674 | 2142 | 0.759436 | AGTGGCGTATCTAGGGGGTG | 60.759 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
1675 | 2143 | 1.458777 | TGGCGTATCTAGGGGGTGG | 60.459 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
1676 | 2144 | 1.152398 | GGCGTATCTAGGGGGTGGA | 60.152 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
1677 | 2145 | 1.470165 | GGCGTATCTAGGGGGTGGAC | 61.470 | 65.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1678 | 2146 | 0.757935 | GCGTATCTAGGGGGTGGACA | 60.758 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1679 | 2147 | 1.329256 | CGTATCTAGGGGGTGGACAG | 58.671 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1680 | 2148 | 1.718280 | GTATCTAGGGGGTGGACAGG | 58.282 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1681 | 2149 | 0.566176 | TATCTAGGGGGTGGACAGGG | 59.434 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
1682 | 2150 | 1.537478 | ATCTAGGGGGTGGACAGGGT | 61.537 | 60.000 | 0.00 | 0.00 | 0.00 | 4.34 |
1683 | 2151 | 1.995626 | CTAGGGGGTGGACAGGGTG | 60.996 | 68.421 | 0.00 | 0.00 | 0.00 | 4.61 |
1684 | 2152 | 3.572715 | TAGGGGGTGGACAGGGTGG | 62.573 | 68.421 | 0.00 | 0.00 | 0.00 | 4.61 |
1686 | 2154 | 3.647771 | GGGGTGGACAGGGTGGTC | 61.648 | 72.222 | 0.00 | 0.00 | 37.06 | 4.02 |
1706 | 2174 | 2.236489 | CATGGACCACCCTGGAATTT | 57.764 | 50.000 | 0.00 | 0.00 | 40.96 | 1.82 |
1707 | 2175 | 2.102578 | CATGGACCACCCTGGAATTTC | 58.897 | 52.381 | 0.00 | 0.00 | 40.96 | 2.17 |
1708 | 2176 | 0.407918 | TGGACCACCCTGGAATTTCC | 59.592 | 55.000 | 8.59 | 8.59 | 40.96 | 3.13 |
1709 | 2177 | 0.324368 | GGACCACCCTGGAATTTCCC | 60.324 | 60.000 | 12.90 | 0.00 | 40.96 | 3.97 |
1710 | 2178 | 0.324368 | GACCACCCTGGAATTTCCCC | 60.324 | 60.000 | 12.90 | 0.00 | 40.96 | 4.81 |
1711 | 2179 | 1.077298 | ACCACCCTGGAATTTCCCCA | 61.077 | 55.000 | 12.90 | 0.00 | 40.96 | 4.96 |
1712 | 2180 | 0.339510 | CCACCCTGGAATTTCCCCAT | 59.660 | 55.000 | 12.90 | 0.00 | 40.96 | 4.00 |
1713 | 2181 | 1.573376 | CCACCCTGGAATTTCCCCATA | 59.427 | 52.381 | 12.90 | 0.00 | 40.96 | 2.74 |
1714 | 2182 | 2.023501 | CCACCCTGGAATTTCCCCATAA | 60.024 | 50.000 | 12.90 | 0.00 | 40.96 | 1.90 |
1715 | 2183 | 3.375207 | CCACCCTGGAATTTCCCCATAAT | 60.375 | 47.826 | 12.90 | 0.00 | 40.96 | 1.28 |
1716 | 2184 | 3.897505 | CACCCTGGAATTTCCCCATAATC | 59.102 | 47.826 | 12.90 | 0.00 | 35.03 | 1.75 |
1717 | 2185 | 3.799578 | ACCCTGGAATTTCCCCATAATCT | 59.200 | 43.478 | 12.90 | 0.00 | 35.03 | 2.40 |
1718 | 2186 | 4.988221 | ACCCTGGAATTTCCCCATAATCTA | 59.012 | 41.667 | 12.90 | 0.00 | 35.03 | 1.98 |
1719 | 2187 | 5.621329 | ACCCTGGAATTTCCCCATAATCTAT | 59.379 | 40.000 | 12.90 | 0.00 | 35.03 | 1.98 |
1720 | 2188 | 6.802660 | ACCCTGGAATTTCCCCATAATCTATA | 59.197 | 38.462 | 12.90 | 0.00 | 35.03 | 1.31 |
1721 | 2189 | 7.468830 | ACCCTGGAATTTCCCCATAATCTATAT | 59.531 | 37.037 | 12.90 | 0.00 | 35.03 | 0.86 |
1722 | 2190 | 9.014049 | CCCTGGAATTTCCCCATAATCTATATA | 57.986 | 37.037 | 12.90 | 0.00 | 35.03 | 0.86 |
1724 | 2192 | 9.566432 | CTGGAATTTCCCCATAATCTATATAGC | 57.434 | 37.037 | 12.90 | 0.00 | 35.03 | 2.97 |
1725 | 2193 | 9.067963 | TGGAATTTCCCCATAATCTATATAGCA | 57.932 | 33.333 | 12.90 | 0.00 | 35.03 | 3.49 |
1787 | 2255 | 9.716531 | TTTATGTGAATATTTTGCATTTGTGGA | 57.283 | 25.926 | 0.00 | 0.00 | 0.00 | 4.02 |
1788 | 2256 | 7.599630 | ATGTGAATATTTTGCATTTGTGGAC | 57.400 | 32.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1789 | 2257 | 5.931146 | TGTGAATATTTTGCATTTGTGGACC | 59.069 | 36.000 | 0.00 | 0.00 | 0.00 | 4.46 |
1790 | 2258 | 5.931146 | GTGAATATTTTGCATTTGTGGACCA | 59.069 | 36.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1791 | 2259 | 5.931146 | TGAATATTTTGCATTTGTGGACCAC | 59.069 | 36.000 | 18.28 | 18.28 | 34.56 | 4.16 |
1792 | 2260 | 2.611225 | TTTTGCATTTGTGGACCACC | 57.389 | 45.000 | 22.00 | 6.52 | 32.73 | 4.61 |
1793 | 2261 | 1.489481 | TTTGCATTTGTGGACCACCA | 58.511 | 45.000 | 22.00 | 8.39 | 44.76 | 4.17 |
1801 | 2269 | 3.179284 | TGGACCACCATGGCATGT | 58.821 | 55.556 | 24.80 | 6.36 | 42.67 | 3.21 |
1802 | 2270 | 1.464273 | TGGACCACCATGGCATGTT | 59.536 | 52.632 | 24.80 | 9.47 | 42.67 | 2.71 |
1803 | 2271 | 0.899253 | TGGACCACCATGGCATGTTG | 60.899 | 55.000 | 24.80 | 21.02 | 42.67 | 3.33 |
1805 | 2273 | 1.606885 | GACCACCATGGCATGTTGGG | 61.607 | 60.000 | 37.11 | 28.76 | 46.08 | 4.12 |
1806 | 2274 | 2.580276 | CACCATGGCATGTTGGGC | 59.420 | 61.111 | 24.80 | 0.00 | 37.32 | 5.36 |
1807 | 2275 | 1.985662 | CACCATGGCATGTTGGGCT | 60.986 | 57.895 | 24.80 | 0.00 | 37.32 | 5.19 |
1808 | 2276 | 0.683828 | CACCATGGCATGTTGGGCTA | 60.684 | 55.000 | 24.80 | 0.00 | 37.32 | 3.93 |
1809 | 2277 | 0.396139 | ACCATGGCATGTTGGGCTAG | 60.396 | 55.000 | 24.80 | 10.19 | 37.32 | 3.42 |
1810 | 2278 | 1.737816 | CATGGCATGTTGGGCTAGC | 59.262 | 57.895 | 19.32 | 6.04 | 0.00 | 3.42 |
1811 | 2279 | 0.754217 | CATGGCATGTTGGGCTAGCT | 60.754 | 55.000 | 19.32 | 0.00 | 0.00 | 3.32 |
1812 | 2280 | 0.846015 | ATGGCATGTTGGGCTAGCTA | 59.154 | 50.000 | 15.72 | 0.96 | 0.00 | 3.32 |
1813 | 2281 | 0.107214 | TGGCATGTTGGGCTAGCTAC | 60.107 | 55.000 | 15.72 | 10.98 | 0.00 | 3.58 |
1814 | 2282 | 1.160329 | GGCATGTTGGGCTAGCTACG | 61.160 | 60.000 | 15.72 | 1.04 | 0.00 | 3.51 |
1815 | 2283 | 1.776034 | GCATGTTGGGCTAGCTACGC | 61.776 | 60.000 | 15.72 | 6.93 | 0.00 | 4.42 |
1816 | 2284 | 1.146263 | ATGTTGGGCTAGCTACGCC | 59.854 | 57.895 | 15.72 | 19.98 | 46.83 | 5.68 |
1821 | 2289 | 2.586357 | GGCTAGCTACGCCACTGC | 60.586 | 66.667 | 22.05 | 9.22 | 46.77 | 4.40 |
1822 | 2290 | 2.586357 | GCTAGCTACGCCACTGCC | 60.586 | 66.667 | 7.70 | 0.00 | 0.00 | 4.85 |
2007 | 2485 | 4.640855 | CGGGTGCAGTGACGACGT | 62.641 | 66.667 | 0.00 | 0.00 | 0.00 | 4.34 |
2143 | 2621 | 2.202932 | CTGAACTCGATGGCCGGG | 60.203 | 66.667 | 2.18 | 0.00 | 46.23 | 5.73 |
2239 | 2735 | 3.745803 | AGCGGGTTCGAGTCGTCC | 61.746 | 66.667 | 13.12 | 15.34 | 39.00 | 4.79 |
2400 | 2896 | 4.424566 | GTTCGACGGCGGCTACCA | 62.425 | 66.667 | 12.58 | 0.00 | 38.28 | 3.25 |
2530 | 3030 | 1.691976 | TGAACTCATCCAACCGACAGT | 59.308 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
2541 | 3041 | 1.068417 | CCGACAGTCCGACACCAAA | 59.932 | 57.895 | 0.40 | 0.00 | 0.00 | 3.28 |
2630 | 3130 | 5.697826 | ACGCGAGTTTATAATACTCCTAGC | 58.302 | 41.667 | 15.93 | 13.56 | 46.40 | 3.42 |
2716 | 3229 | 9.793252 | TTGTTTCTTTCTTTCTTTCATCTTGAG | 57.207 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
2810 | 3330 | 8.896744 | CGACGGAGGGATACATATATTACTTTA | 58.103 | 37.037 | 0.00 | 0.00 | 39.74 | 1.85 |
2998 | 3524 | 1.921982 | TTGGTGATTGGTGATGGTGG | 58.078 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2999 | 3525 | 1.071434 | TGGTGATTGGTGATGGTGGA | 58.929 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3036 | 3562 | 1.012486 | GGCTGGATCGTTCGTTCGTT | 61.012 | 55.000 | 2.67 | 0.00 | 0.00 | 3.85 |
3037 | 3563 | 0.365859 | GCTGGATCGTTCGTTCGTTC | 59.634 | 55.000 | 2.67 | 4.04 | 0.00 | 3.95 |
3038 | 3564 | 0.633733 | CTGGATCGTTCGTTCGTTCG | 59.366 | 55.000 | 2.67 | 0.00 | 32.49 | 3.95 |
3039 | 3565 | 0.040157 | TGGATCGTTCGTTCGTTCGT | 60.040 | 50.000 | 9.89 | 1.87 | 32.49 | 3.85 |
3146 | 3676 | 2.260844 | ATTAGCACATGGACGATGGG | 57.739 | 50.000 | 0.00 | 0.00 | 38.68 | 4.00 |
3176 | 3719 | 7.862372 | GCTTAATCACAGTGAAATGAAGTTTGA | 59.138 | 33.333 | 7.50 | 0.00 | 0.00 | 2.69 |
3193 | 3736 | 8.930760 | TGAAGTTTGAAAAACGAAAAACATCAT | 58.069 | 25.926 | 0.00 | 0.00 | 36.12 | 2.45 |
3231 | 3775 | 3.503363 | TGTTAGAAGGTGCAGCTTTCATG | 59.497 | 43.478 | 30.17 | 0.00 | 35.86 | 3.07 |
3236 | 3780 | 0.248289 | GGTGCAGCTTTCATGGCATT | 59.752 | 50.000 | 9.07 | 0.00 | 38.68 | 3.56 |
3262 | 3806 | 4.843728 | CTGCCTAGGTAGGTTGATTTTGA | 58.156 | 43.478 | 18.61 | 0.00 | 45.42 | 2.69 |
3265 | 3809 | 5.885912 | TGCCTAGGTAGGTTGATTTTGAATC | 59.114 | 40.000 | 11.31 | 0.00 | 45.42 | 2.52 |
3266 | 3810 | 6.122964 | GCCTAGGTAGGTTGATTTTGAATCT | 58.877 | 40.000 | 11.31 | 0.00 | 45.42 | 2.40 |
3267 | 3811 | 6.261158 | GCCTAGGTAGGTTGATTTTGAATCTC | 59.739 | 42.308 | 11.31 | 0.00 | 45.42 | 2.75 |
3268 | 3812 | 7.338710 | CCTAGGTAGGTTGATTTTGAATCTCA | 58.661 | 38.462 | 0.00 | 0.00 | 38.69 | 3.27 |
3269 | 3813 | 7.281100 | CCTAGGTAGGTTGATTTTGAATCTCAC | 59.719 | 40.741 | 0.00 | 0.38 | 38.69 | 3.51 |
3270 | 3814 | 6.784031 | AGGTAGGTTGATTTTGAATCTCACT | 58.216 | 36.000 | 2.74 | 1.32 | 0.00 | 3.41 |
3271 | 3815 | 6.881602 | AGGTAGGTTGATTTTGAATCTCACTC | 59.118 | 38.462 | 2.74 | 0.00 | 0.00 | 3.51 |
3272 | 3816 | 6.655003 | GGTAGGTTGATTTTGAATCTCACTCA | 59.345 | 38.462 | 2.74 | 0.00 | 0.00 | 3.41 |
3273 | 3817 | 7.174946 | GGTAGGTTGATTTTGAATCTCACTCAA | 59.825 | 37.037 | 2.74 | 0.00 | 0.00 | 3.02 |
3274 | 3818 | 6.974965 | AGGTTGATTTTGAATCTCACTCAAC | 58.025 | 36.000 | 12.85 | 12.85 | 38.48 | 3.18 |
3275 | 3819 | 6.547141 | AGGTTGATTTTGAATCTCACTCAACA | 59.453 | 34.615 | 18.21 | 0.00 | 39.61 | 3.33 |
3276 | 3820 | 6.860023 | GGTTGATTTTGAATCTCACTCAACAG | 59.140 | 38.462 | 18.21 | 0.00 | 39.61 | 3.16 |
3277 | 3821 | 6.564709 | TGATTTTGAATCTCACTCAACAGG | 57.435 | 37.500 | 2.74 | 0.00 | 32.61 | 4.00 |
3278 | 3822 | 6.298361 | TGATTTTGAATCTCACTCAACAGGA | 58.702 | 36.000 | 2.74 | 0.00 | 32.61 | 3.86 |
3279 | 3823 | 6.772233 | TGATTTTGAATCTCACTCAACAGGAA | 59.228 | 34.615 | 2.74 | 0.00 | 32.61 | 3.36 |
3280 | 3824 | 7.285172 | TGATTTTGAATCTCACTCAACAGGAAA | 59.715 | 33.333 | 2.74 | 0.00 | 32.61 | 3.13 |
3281 | 3825 | 7.403312 | TTTTGAATCTCACTCAACAGGAAAA | 57.597 | 32.000 | 0.00 | 0.00 | 32.61 | 2.29 |
3282 | 3826 | 6.624352 | TTGAATCTCACTCAACAGGAAAAG | 57.376 | 37.500 | 0.00 | 0.00 | 0.00 | 2.27 |
3283 | 3827 | 5.928976 | TGAATCTCACTCAACAGGAAAAGA | 58.071 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
3284 | 3828 | 5.760253 | TGAATCTCACTCAACAGGAAAAGAC | 59.240 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3285 | 3829 | 5.559148 | ATCTCACTCAACAGGAAAAGACT | 57.441 | 39.130 | 0.00 | 0.00 | 0.00 | 3.24 |
3286 | 3830 | 4.950050 | TCTCACTCAACAGGAAAAGACTC | 58.050 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
3287 | 3831 | 4.651503 | TCTCACTCAACAGGAAAAGACTCT | 59.348 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
3288 | 3832 | 4.950050 | TCACTCAACAGGAAAAGACTCTC | 58.050 | 43.478 | 0.00 | 0.00 | 0.00 | 3.20 |
3289 | 3833 | 3.738282 | CACTCAACAGGAAAAGACTCTCG | 59.262 | 47.826 | 0.00 | 0.00 | 0.00 | 4.04 |
3290 | 3834 | 2.734079 | CTCAACAGGAAAAGACTCTCGC | 59.266 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
3291 | 3835 | 2.365617 | TCAACAGGAAAAGACTCTCGCT | 59.634 | 45.455 | 0.00 | 0.00 | 0.00 | 4.93 |
3292 | 3836 | 2.734079 | CAACAGGAAAAGACTCTCGCTC | 59.266 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
3293 | 3837 | 1.068194 | ACAGGAAAAGACTCTCGCTCG | 60.068 | 52.381 | 0.00 | 0.00 | 0.00 | 5.03 |
3294 | 3838 | 0.109039 | AGGAAAAGACTCTCGCTCGC | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
3295 | 3839 | 1.406970 | GGAAAAGACTCTCGCTCGCG | 61.407 | 60.000 | 0.00 | 0.00 | 41.35 | 5.87 |
3296 | 3840 | 0.729816 | GAAAAGACTCTCGCTCGCGT | 60.730 | 55.000 | 5.77 | 0.00 | 40.74 | 6.01 |
3297 | 3841 | 0.729816 | AAAAGACTCTCGCTCGCGTC | 60.730 | 55.000 | 5.77 | 1.49 | 40.74 | 5.19 |
3298 | 3842 | 2.836067 | AAAGACTCTCGCTCGCGTCG | 62.836 | 60.000 | 5.77 | 11.68 | 40.74 | 5.12 |
3317 | 3861 | 3.465403 | CTCCAGGGGGCGACTCAG | 61.465 | 72.222 | 0.00 | 0.00 | 0.00 | 3.35 |
3352 | 3896 | 4.467107 | GCCCTCGACCTCCCTCCT | 62.467 | 72.222 | 0.00 | 0.00 | 0.00 | 3.69 |
3353 | 3897 | 2.123640 | CCCTCGACCTCCCTCCTC | 60.124 | 72.222 | 0.00 | 0.00 | 0.00 | 3.71 |
3354 | 3898 | 2.123640 | CCTCGACCTCCCTCCTCC | 60.124 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
3355 | 3899 | 2.123640 | CTCGACCTCCCTCCTCCC | 60.124 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
3356 | 3900 | 3.742248 | CTCGACCTCCCTCCTCCCC | 62.742 | 73.684 | 0.00 | 0.00 | 0.00 | 4.81 |
3357 | 3901 | 3.756783 | CGACCTCCCTCCTCCCCT | 61.757 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
3358 | 3902 | 2.788589 | GACCTCCCTCCTCCCCTT | 59.211 | 66.667 | 0.00 | 0.00 | 0.00 | 3.95 |
3359 | 3903 | 1.383386 | GACCTCCCTCCTCCCCTTC | 60.383 | 68.421 | 0.00 | 0.00 | 0.00 | 3.46 |
3360 | 3904 | 1.869452 | ACCTCCCTCCTCCCCTTCT | 60.869 | 63.158 | 0.00 | 0.00 | 0.00 | 2.85 |
3361 | 3905 | 1.398234 | CCTCCCTCCTCCCCTTCTT | 59.602 | 63.158 | 0.00 | 0.00 | 0.00 | 2.52 |
3362 | 3906 | 0.692756 | CCTCCCTCCTCCCCTTCTTC | 60.693 | 65.000 | 0.00 | 0.00 | 0.00 | 2.87 |
3363 | 3907 | 0.692756 | CTCCCTCCTCCCCTTCTTCC | 60.693 | 65.000 | 0.00 | 0.00 | 0.00 | 3.46 |
3364 | 3908 | 1.162951 | TCCCTCCTCCCCTTCTTCCT | 61.163 | 60.000 | 0.00 | 0.00 | 0.00 | 3.36 |
3365 | 3909 | 0.692756 | CCCTCCTCCCCTTCTTCCTC | 60.693 | 65.000 | 0.00 | 0.00 | 0.00 | 3.71 |
3366 | 3910 | 1.045911 | CCTCCTCCCCTTCTTCCTCG | 61.046 | 65.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3367 | 3911 | 1.681486 | CTCCTCCCCTTCTTCCTCGC | 61.681 | 65.000 | 0.00 | 0.00 | 0.00 | 5.03 |
3368 | 3912 | 2.736826 | CCTCCCCTTCTTCCTCGCC | 61.737 | 68.421 | 0.00 | 0.00 | 0.00 | 5.54 |
3369 | 3913 | 3.075005 | TCCCCTTCTTCCTCGCCG | 61.075 | 66.667 | 0.00 | 0.00 | 0.00 | 6.46 |
3370 | 3914 | 4.840005 | CCCCTTCTTCCTCGCCGC | 62.840 | 72.222 | 0.00 | 0.00 | 0.00 | 6.53 |
3371 | 3915 | 4.840005 | CCCTTCTTCCTCGCCGCC | 62.840 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
3372 | 3916 | 4.082523 | CCTTCTTCCTCGCCGCCA | 62.083 | 66.667 | 0.00 | 0.00 | 0.00 | 5.69 |
3373 | 3917 | 2.815647 | CTTCTTCCTCGCCGCCAC | 60.816 | 66.667 | 0.00 | 0.00 | 0.00 | 5.01 |
3374 | 3918 | 4.388499 | TTCTTCCTCGCCGCCACC | 62.388 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
3380 | 3924 | 4.735132 | CTCGCCGCCACCGAAGAA | 62.735 | 66.667 | 0.00 | 0.00 | 36.29 | 2.52 |
3381 | 3925 | 4.735132 | TCGCCGCCACCGAAGAAG | 62.735 | 66.667 | 0.00 | 0.00 | 36.29 | 2.85 |
3384 | 3928 | 2.434359 | CCGCCACCGAAGAAGGTC | 60.434 | 66.667 | 0.00 | 0.00 | 43.89 | 3.85 |
3385 | 3929 | 2.809601 | CGCCACCGAAGAAGGTCG | 60.810 | 66.667 | 0.00 | 0.00 | 43.89 | 4.79 |
3391 | 3935 | 2.881352 | CGAAGAAGGTCGGCGAGC | 60.881 | 66.667 | 29.85 | 29.85 | 37.37 | 5.03 |
3392 | 3936 | 2.881352 | GAAGAAGGTCGGCGAGCG | 60.881 | 66.667 | 30.22 | 0.00 | 35.00 | 5.03 |
3393 | 3937 | 3.338126 | GAAGAAGGTCGGCGAGCGA | 62.338 | 63.158 | 30.22 | 0.00 | 35.00 | 4.93 |
3394 | 3938 | 2.814183 | GAAGAAGGTCGGCGAGCGAA | 62.814 | 60.000 | 30.22 | 0.00 | 35.00 | 4.70 |
3395 | 3939 | 2.820767 | AAGAAGGTCGGCGAGCGAAG | 62.821 | 60.000 | 30.22 | 0.00 | 35.00 | 3.79 |
3434 | 3978 | 4.048470 | GGCGGGCCTTCCTCCTTT | 62.048 | 66.667 | 0.84 | 0.00 | 0.00 | 3.11 |
3435 | 3979 | 2.438614 | GCGGGCCTTCCTCCTTTC | 60.439 | 66.667 | 0.84 | 0.00 | 0.00 | 2.62 |
3436 | 3980 | 2.972819 | GCGGGCCTTCCTCCTTTCT | 61.973 | 63.158 | 0.84 | 0.00 | 0.00 | 2.52 |
3437 | 3981 | 1.685820 | CGGGCCTTCCTCCTTTCTT | 59.314 | 57.895 | 0.84 | 0.00 | 0.00 | 2.52 |
3438 | 3982 | 0.393132 | CGGGCCTTCCTCCTTTCTTC | 60.393 | 60.000 | 0.84 | 0.00 | 0.00 | 2.87 |
3439 | 3983 | 0.698818 | GGGCCTTCCTCCTTTCTTCA | 59.301 | 55.000 | 0.84 | 0.00 | 0.00 | 3.02 |
3440 | 3984 | 1.340502 | GGGCCTTCCTCCTTTCTTCAG | 60.341 | 57.143 | 0.84 | 0.00 | 0.00 | 3.02 |
3441 | 3985 | 1.340502 | GGCCTTCCTCCTTTCTTCAGG | 60.341 | 57.143 | 0.00 | 0.00 | 34.86 | 3.86 |
3442 | 3986 | 1.630878 | GCCTTCCTCCTTTCTTCAGGA | 59.369 | 52.381 | 0.00 | 0.00 | 41.00 | 3.86 |
3448 | 3992 | 2.668850 | TCCTTTCTTCAGGAGGGGAT | 57.331 | 50.000 | 0.00 | 0.00 | 38.11 | 3.85 |
3449 | 3993 | 2.482494 | TCCTTTCTTCAGGAGGGGATC | 58.518 | 52.381 | 0.00 | 0.00 | 38.11 | 3.36 |
3459 | 4003 | 3.123111 | AGGGGATCCTCTGGCTGA | 58.877 | 61.111 | 15.29 | 0.00 | 39.80 | 4.26 |
3460 | 4004 | 1.074623 | AGGGGATCCTCTGGCTGAG | 60.075 | 63.158 | 15.29 | 13.90 | 39.80 | 3.35 |
3461 | 4005 | 1.074926 | GGGGATCCTCTGGCTGAGA | 60.075 | 63.158 | 21.42 | 9.02 | 45.39 | 3.27 |
3462 | 4006 | 0.473501 | GGGGATCCTCTGGCTGAGAT | 60.474 | 60.000 | 21.42 | 12.91 | 45.39 | 2.75 |
3463 | 4007 | 0.686224 | GGGATCCTCTGGCTGAGATG | 59.314 | 60.000 | 21.42 | 7.08 | 45.39 | 2.90 |
3464 | 4008 | 0.035176 | GGATCCTCTGGCTGAGATGC | 59.965 | 60.000 | 21.42 | 13.88 | 45.39 | 3.91 |
3465 | 4009 | 0.757512 | GATCCTCTGGCTGAGATGCA | 59.242 | 55.000 | 21.42 | 0.00 | 45.39 | 3.96 |
3466 | 4010 | 1.348366 | GATCCTCTGGCTGAGATGCAT | 59.652 | 52.381 | 21.42 | 0.00 | 45.39 | 3.96 |
3467 | 4011 | 0.757512 | TCCTCTGGCTGAGATGCATC | 59.242 | 55.000 | 19.37 | 19.37 | 45.39 | 3.91 |
3468 | 4012 | 0.600518 | CCTCTGGCTGAGATGCATCG | 60.601 | 60.000 | 20.67 | 8.30 | 45.39 | 3.84 |
3469 | 4013 | 0.600518 | CTCTGGCTGAGATGCATCGG | 60.601 | 60.000 | 20.67 | 15.26 | 45.39 | 4.18 |
3472 | 4016 | 2.587194 | GCTGAGATGCATCGGCGT | 60.587 | 61.111 | 20.67 | 3.25 | 45.35 | 5.68 |
3478 | 4022 | 4.552365 | ATGCATCGGCGTCCCTGG | 62.552 | 66.667 | 6.85 | 0.00 | 45.35 | 4.45 |
3486 | 4030 | 4.382320 | GCGTCCCTGGGCGTACAA | 62.382 | 66.667 | 23.72 | 0.00 | 0.00 | 2.41 |
3487 | 4031 | 2.433664 | CGTCCCTGGGCGTACAAC | 60.434 | 66.667 | 17.72 | 5.80 | 0.00 | 3.32 |
3488 | 4032 | 2.745037 | GTCCCTGGGCGTACAACA | 59.255 | 61.111 | 8.22 | 0.00 | 0.00 | 3.33 |
3489 | 4033 | 1.298667 | GTCCCTGGGCGTACAACAT | 59.701 | 57.895 | 8.22 | 0.00 | 0.00 | 2.71 |
3490 | 4034 | 1.024579 | GTCCCTGGGCGTACAACATG | 61.025 | 60.000 | 8.22 | 0.00 | 0.00 | 3.21 |
3491 | 4035 | 1.748879 | CCCTGGGCGTACAACATGG | 60.749 | 63.158 | 0.00 | 0.00 | 0.00 | 3.66 |
3492 | 4036 | 1.298340 | CCTGGGCGTACAACATGGA | 59.702 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
3493 | 4037 | 0.744414 | CCTGGGCGTACAACATGGAG | 60.744 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
3494 | 4038 | 0.744414 | CTGGGCGTACAACATGGAGG | 60.744 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3495 | 4039 | 2.112815 | GGGCGTACAACATGGAGGC | 61.113 | 63.158 | 0.00 | 0.00 | 41.12 | 4.70 |
3496 | 4040 | 2.461110 | GGCGTACAACATGGAGGCG | 61.461 | 63.158 | 0.00 | 0.08 | 42.67 | 5.52 |
3497 | 4041 | 2.461110 | GCGTACAACATGGAGGCGG | 61.461 | 63.158 | 0.00 | 0.00 | 32.01 | 6.13 |
3498 | 4042 | 1.216977 | CGTACAACATGGAGGCGGA | 59.783 | 57.895 | 0.00 | 0.00 | 0.00 | 5.54 |
3499 | 4043 | 0.806102 | CGTACAACATGGAGGCGGAG | 60.806 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3500 | 4044 | 0.249398 | GTACAACATGGAGGCGGAGT | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3501 | 4045 | 0.981183 | TACAACATGGAGGCGGAGTT | 59.019 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3502 | 4046 | 0.606401 | ACAACATGGAGGCGGAGTTG | 60.606 | 55.000 | 0.00 | 0.00 | 43.71 | 3.16 |
3503 | 4047 | 1.002134 | AACATGGAGGCGGAGTTGG | 60.002 | 57.895 | 0.00 | 0.00 | 0.00 | 3.77 |
3504 | 4048 | 2.825836 | CATGGAGGCGGAGTTGGC | 60.826 | 66.667 | 0.00 | 0.00 | 0.00 | 4.52 |
3505 | 4049 | 4.473520 | ATGGAGGCGGAGTTGGCG | 62.474 | 66.667 | 0.00 | 0.00 | 39.82 | 5.69 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
5 | 6 | 0.402121 | AACCCCTTCAGCTCTTGTCC | 59.598 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
8 | 9 | 3.356529 | ACATAACCCCTTCAGCTCTTG | 57.643 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
10 | 11 | 2.431057 | CGTACATAACCCCTTCAGCTCT | 59.569 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
14 | 15 | 5.107133 | CAGTTACGTACATAACCCCTTCAG | 58.893 | 45.833 | 8.16 | 0.00 | 35.95 | 3.02 |
67 | 68 | 9.639601 | CAGTGTCAAATTGATACTACTACTGAA | 57.360 | 33.333 | 21.84 | 0.00 | 45.19 | 3.02 |
68 | 69 | 8.803235 | ACAGTGTCAAATTGATACTACTACTGA | 58.197 | 33.333 | 21.84 | 0.00 | 45.19 | 3.41 |
69 | 70 | 8.988064 | ACAGTGTCAAATTGATACTACTACTG | 57.012 | 34.615 | 21.84 | 13.38 | 45.19 | 2.74 |
70 | 71 | 8.803235 | TGACAGTGTCAAATTGATACTACTACT | 58.197 | 33.333 | 23.55 | 5.74 | 45.19 | 2.57 |
71 | 72 | 8.981724 | TGACAGTGTCAAATTGATACTACTAC | 57.018 | 34.615 | 23.55 | 14.34 | 45.19 | 2.73 |
108 | 109 | 7.281774 | GGTTATTCATGCATGTAGAGGATATGG | 59.718 | 40.741 | 25.43 | 0.00 | 0.00 | 2.74 |
109 | 110 | 7.825761 | TGGTTATTCATGCATGTAGAGGATATG | 59.174 | 37.037 | 25.43 | 0.00 | 0.00 | 1.78 |
112 | 113 | 6.191657 | TGGTTATTCATGCATGTAGAGGAT | 57.808 | 37.500 | 25.43 | 13.05 | 0.00 | 3.24 |
113 | 114 | 5.628797 | TGGTTATTCATGCATGTAGAGGA | 57.371 | 39.130 | 25.43 | 2.81 | 0.00 | 3.71 |
115 | 116 | 7.087409 | TGTTTGGTTATTCATGCATGTAGAG | 57.913 | 36.000 | 25.43 | 0.12 | 0.00 | 2.43 |
158 | 162 | 5.277297 | CGTGTCACTTTAAAGCAATGTCTCA | 60.277 | 40.000 | 15.24 | 5.64 | 0.00 | 3.27 |
167 | 171 | 3.396560 | AGGGTACGTGTCACTTTAAAGC | 58.603 | 45.455 | 15.24 | 0.00 | 0.00 | 3.51 |
170 | 174 | 5.726980 | ATGTAGGGTACGTGTCACTTTAA | 57.273 | 39.130 | 0.00 | 0.00 | 0.00 | 1.52 |
171 | 175 | 5.243507 | TCAATGTAGGGTACGTGTCACTTTA | 59.756 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
190 | 194 | 2.167075 | GGCCCTTCAATTCCTGTCAATG | 59.833 | 50.000 | 0.00 | 0.00 | 0.00 | 2.82 |
209 | 213 | 2.770589 | TTACGTACGTAGCCCCGGC | 61.771 | 63.158 | 25.56 | 0.00 | 42.33 | 6.13 |
210 | 214 | 1.064134 | GTTACGTACGTAGCCCCGG | 59.936 | 63.158 | 26.15 | 0.00 | 31.71 | 5.73 |
211 | 215 | 0.248215 | CAGTTACGTACGTAGCCCCG | 60.248 | 60.000 | 30.65 | 19.38 | 33.22 | 5.73 |
212 | 216 | 0.811281 | ACAGTTACGTACGTAGCCCC | 59.189 | 55.000 | 30.65 | 18.77 | 33.22 | 5.80 |
254 | 260 | 4.257731 | TGTCGCCTCTTATGTAATTTGCA | 58.742 | 39.130 | 0.00 | 0.00 | 0.00 | 4.08 |
255 | 261 | 4.875544 | TGTCGCCTCTTATGTAATTTGC | 57.124 | 40.909 | 0.00 | 0.00 | 0.00 | 3.68 |
256 | 262 | 6.037062 | TGTCATGTCGCCTCTTATGTAATTTG | 59.963 | 38.462 | 0.00 | 0.00 | 0.00 | 2.32 |
257 | 263 | 6.112734 | TGTCATGTCGCCTCTTATGTAATTT | 58.887 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
266 | 275 | 3.827008 | ACATATGTCATGTCGCCTCTT | 57.173 | 42.857 | 1.41 | 0.00 | 0.00 | 2.85 |
271 | 280 | 3.543494 | GCAACAAACATATGTCATGTCGC | 59.457 | 43.478 | 21.03 | 18.98 | 31.81 | 5.19 |
275 | 288 | 3.853103 | CACGGCAACAAACATATGTCATG | 59.147 | 43.478 | 9.23 | 13.55 | 31.81 | 3.07 |
276 | 289 | 3.673052 | GCACGGCAACAAACATATGTCAT | 60.673 | 43.478 | 9.23 | 0.00 | 31.81 | 3.06 |
277 | 290 | 2.351253 | GCACGGCAACAAACATATGTCA | 60.351 | 45.455 | 9.23 | 0.00 | 31.81 | 3.58 |
278 | 291 | 2.095263 | AGCACGGCAACAAACATATGTC | 60.095 | 45.455 | 9.23 | 0.00 | 31.81 | 3.06 |
279 | 292 | 1.885887 | AGCACGGCAACAAACATATGT | 59.114 | 42.857 | 1.41 | 1.41 | 34.24 | 2.29 |
280 | 293 | 2.634982 | AGCACGGCAACAAACATATG | 57.365 | 45.000 | 0.00 | 0.00 | 0.00 | 1.78 |
281 | 294 | 2.097466 | GCTAGCACGGCAACAAACATAT | 59.903 | 45.455 | 10.63 | 0.00 | 0.00 | 1.78 |
282 | 295 | 1.466950 | GCTAGCACGGCAACAAACATA | 59.533 | 47.619 | 10.63 | 0.00 | 0.00 | 2.29 |
323 | 338 | 4.156556 | TCTTGATGCTGCAACAAGTTATCC | 59.843 | 41.667 | 35.73 | 8.50 | 42.30 | 2.59 |
426 | 460 | 0.839946 | GCATCCTCCACTACCACCAT | 59.160 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
590 | 883 | 0.388520 | GTGAAATCTTTGGCCCGTGC | 60.389 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
684 | 1062 | 2.099427 | GCTAGCCAGTGTCAGTACTACC | 59.901 | 54.545 | 2.29 | 0.00 | 0.00 | 3.18 |
708 | 1086 | 1.000955 | GACAGTACACACACAGGGAGG | 59.999 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
966 | 1394 | 1.290491 | GAGACGGACTGAGACGACGT | 61.290 | 60.000 | 0.00 | 0.00 | 40.85 | 4.34 |
970 | 1398 | 0.444651 | GACTGAGACGGACTGAGACG | 59.555 | 60.000 | 0.78 | 0.00 | 34.09 | 4.18 |
971 | 1399 | 0.806241 | GGACTGAGACGGACTGAGAC | 59.194 | 60.000 | 0.78 | 0.00 | 34.09 | 3.36 |
972 | 1400 | 0.673956 | CGGACTGAGACGGACTGAGA | 60.674 | 60.000 | 0.78 | 0.00 | 34.09 | 3.27 |
973 | 1401 | 0.956410 | ACGGACTGAGACGGACTGAG | 60.956 | 60.000 | 6.32 | 0.00 | 35.98 | 3.35 |
974 | 1402 | 0.954449 | GACGGACTGAGACGGACTGA | 60.954 | 60.000 | 6.32 | 0.00 | 0.00 | 3.41 |
975 | 1403 | 1.502640 | GACGGACTGAGACGGACTG | 59.497 | 63.158 | 6.32 | 0.00 | 0.00 | 3.51 |
976 | 1404 | 2.033755 | CGACGGACTGAGACGGACT | 61.034 | 63.158 | 6.32 | 0.00 | 0.00 | 3.85 |
977 | 1405 | 2.479650 | CGACGGACTGAGACGGAC | 59.520 | 66.667 | 6.32 | 0.00 | 0.00 | 4.79 |
978 | 1406 | 2.745100 | CCGACGGACTGAGACGGA | 60.745 | 66.667 | 8.64 | 0.00 | 45.31 | 4.69 |
979 | 1407 | 4.477975 | GCCGACGGACTGAGACGG | 62.478 | 72.222 | 20.50 | 0.00 | 45.26 | 4.79 |
1169 | 1614 | 1.454663 | GATCAAGGAGGGGGCAAGC | 60.455 | 63.158 | 0.00 | 0.00 | 0.00 | 4.01 |
1274 | 1723 | 4.065423 | ACATTGTCACTTAATTGCGTCG | 57.935 | 40.909 | 0.00 | 0.00 | 0.00 | 5.12 |
1277 | 1726 | 4.975502 | ACACAACATTGTCACTTAATTGCG | 59.024 | 37.500 | 0.00 | 0.00 | 39.91 | 4.85 |
1286 | 1735 | 4.614555 | TGTCTTCACACAACATTGTCAC | 57.385 | 40.909 | 0.00 | 0.00 | 39.91 | 3.67 |
1299 | 1748 | 8.034058 | AGTAATTTGCTAATCAGTGTCTTCAC | 57.966 | 34.615 | 0.00 | 0.00 | 44.15 | 3.18 |
1302 | 1751 | 8.798859 | ATGAGTAATTTGCTAATCAGTGTCTT | 57.201 | 30.769 | 0.00 | 0.00 | 30.14 | 3.01 |
1303 | 1752 | 8.043113 | TGATGAGTAATTTGCTAATCAGTGTCT | 58.957 | 33.333 | 9.74 | 0.00 | 30.87 | 3.41 |
1304 | 1753 | 8.201554 | TGATGAGTAATTTGCTAATCAGTGTC | 57.798 | 34.615 | 9.74 | 0.00 | 30.87 | 3.67 |
1305 | 1754 | 8.565896 | TTGATGAGTAATTTGCTAATCAGTGT | 57.434 | 30.769 | 12.61 | 0.00 | 35.79 | 3.55 |
1314 | 1763 | 9.199982 | CACTTCAAAATTGATGAGTAATTTGCT | 57.800 | 29.630 | 13.92 | 0.00 | 37.68 | 3.91 |
1315 | 1764 | 7.953710 | GCACTTCAAAATTGATGAGTAATTTGC | 59.046 | 33.333 | 13.92 | 8.57 | 37.68 | 3.68 |
1316 | 1765 | 8.437742 | GGCACTTCAAAATTGATGAGTAATTTG | 58.562 | 33.333 | 13.92 | 0.00 | 37.68 | 2.32 |
1317 | 1766 | 8.149647 | TGGCACTTCAAAATTGATGAGTAATTT | 58.850 | 29.630 | 13.92 | 0.00 | 38.88 | 1.82 |
1320 | 1769 | 6.647334 | TGGCACTTCAAAATTGATGAGTAA | 57.353 | 33.333 | 13.92 | 0.07 | 37.00 | 2.24 |
1323 | 1772 | 7.171848 | TCAAATTGGCACTTCAAAATTGATGAG | 59.828 | 33.333 | 13.92 | 8.47 | 37.00 | 2.90 |
1325 | 1774 | 7.192148 | TCAAATTGGCACTTCAAAATTGATG | 57.808 | 32.000 | 7.31 | 7.31 | 37.00 | 3.07 |
1327 | 1781 | 6.205076 | CCATCAAATTGGCACTTCAAAATTGA | 59.795 | 34.615 | 0.00 | 0.00 | 39.03 | 2.57 |
1363 | 1820 | 7.148440 | GCCTAATAATGCAGCAACAAATCAAAA | 60.148 | 33.333 | 0.00 | 0.00 | 0.00 | 2.44 |
1367 | 1824 | 4.746611 | GGCCTAATAATGCAGCAACAAATC | 59.253 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
1500 | 1962 | 0.400213 | ACTTGTTGCCGAGGATGGAA | 59.600 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1563 | 2025 | 3.970640 | AGGAGTTCCAGAAGTTCTTGACT | 59.029 | 43.478 | 1.56 | 7.39 | 38.32 | 3.41 |
1652 | 2120 | 1.367840 | CCCTAGATACGCCACTGGC | 59.632 | 63.158 | 10.35 | 10.35 | 46.75 | 4.85 |
1653 | 2121 | 1.472662 | CCCCCTAGATACGCCACTGG | 61.473 | 65.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1654 | 2122 | 0.759436 | ACCCCCTAGATACGCCACTG | 60.759 | 60.000 | 0.00 | 0.00 | 0.00 | 3.66 |
1655 | 2123 | 0.759436 | CACCCCCTAGATACGCCACT | 60.759 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1656 | 2124 | 1.746517 | CACCCCCTAGATACGCCAC | 59.253 | 63.158 | 0.00 | 0.00 | 0.00 | 5.01 |
1657 | 2125 | 1.458777 | CCACCCCCTAGATACGCCA | 60.459 | 63.158 | 0.00 | 0.00 | 0.00 | 5.69 |
1658 | 2126 | 1.152398 | TCCACCCCCTAGATACGCC | 60.152 | 63.158 | 0.00 | 0.00 | 0.00 | 5.68 |
1659 | 2127 | 0.757935 | TGTCCACCCCCTAGATACGC | 60.758 | 60.000 | 0.00 | 0.00 | 0.00 | 4.42 |
1660 | 2128 | 1.329256 | CTGTCCACCCCCTAGATACG | 58.671 | 60.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1661 | 2129 | 1.718280 | CCTGTCCACCCCCTAGATAC | 58.282 | 60.000 | 0.00 | 0.00 | 0.00 | 2.24 |
1662 | 2130 | 0.566176 | CCCTGTCCACCCCCTAGATA | 59.434 | 60.000 | 0.00 | 0.00 | 0.00 | 1.98 |
1663 | 2131 | 1.318380 | CCCTGTCCACCCCCTAGAT | 59.682 | 63.158 | 0.00 | 0.00 | 0.00 | 1.98 |
1664 | 2132 | 2.181773 | ACCCTGTCCACCCCCTAGA | 61.182 | 63.158 | 0.00 | 0.00 | 0.00 | 2.43 |
1665 | 2133 | 1.995626 | CACCCTGTCCACCCCCTAG | 60.996 | 68.421 | 0.00 | 0.00 | 0.00 | 3.02 |
1666 | 2134 | 2.124085 | CACCCTGTCCACCCCCTA | 59.876 | 66.667 | 0.00 | 0.00 | 0.00 | 3.53 |
1669 | 2137 | 3.647771 | GACCACCCTGTCCACCCC | 61.648 | 72.222 | 0.00 | 0.00 | 0.00 | 4.95 |
1675 | 2143 | 1.299976 | GTCCATGGACCACCCTGTC | 59.700 | 63.158 | 31.37 | 5.53 | 39.08 | 3.51 |
1676 | 2144 | 3.495729 | GTCCATGGACCACCCTGT | 58.504 | 61.111 | 31.37 | 0.00 | 39.08 | 4.00 |
1687 | 2155 | 2.102578 | GAAATTCCAGGGTGGTCCATG | 58.897 | 52.381 | 0.00 | 0.00 | 44.12 | 3.66 |
1688 | 2156 | 1.007118 | GGAAATTCCAGGGTGGTCCAT | 59.993 | 52.381 | 7.23 | 0.00 | 39.03 | 3.41 |
1689 | 2157 | 0.407918 | GGAAATTCCAGGGTGGTCCA | 59.592 | 55.000 | 7.23 | 0.00 | 39.03 | 4.02 |
1690 | 2158 | 0.324368 | GGGAAATTCCAGGGTGGTCC | 60.324 | 60.000 | 14.68 | 0.00 | 38.64 | 4.46 |
1691 | 2159 | 0.324368 | GGGGAAATTCCAGGGTGGTC | 60.324 | 60.000 | 14.68 | 0.00 | 38.64 | 4.02 |
1692 | 2160 | 1.077298 | TGGGGAAATTCCAGGGTGGT | 61.077 | 55.000 | 14.68 | 0.00 | 38.64 | 4.16 |
1693 | 2161 | 0.339510 | ATGGGGAAATTCCAGGGTGG | 59.660 | 55.000 | 14.68 | 0.00 | 38.64 | 4.61 |
1694 | 2162 | 3.396685 | TTATGGGGAAATTCCAGGGTG | 57.603 | 47.619 | 14.68 | 0.00 | 38.64 | 4.61 |
1695 | 2163 | 3.799578 | AGATTATGGGGAAATTCCAGGGT | 59.200 | 43.478 | 14.68 | 0.00 | 38.64 | 4.34 |
1696 | 2164 | 4.475919 | AGATTATGGGGAAATTCCAGGG | 57.524 | 45.455 | 14.68 | 0.00 | 38.64 | 4.45 |
1698 | 2166 | 9.566432 | GCTATATAGATTATGGGGAAATTCCAG | 57.434 | 37.037 | 14.68 | 0.00 | 38.64 | 3.86 |
1699 | 2167 | 9.067963 | TGCTATATAGATTATGGGGAAATTCCA | 57.932 | 33.333 | 14.68 | 0.00 | 38.64 | 3.53 |
1761 | 2229 | 9.716531 | TCCACAAATGCAAAATATTCACATAAA | 57.283 | 25.926 | 0.00 | 0.00 | 0.00 | 1.40 |
1762 | 2230 | 9.149225 | GTCCACAAATGCAAAATATTCACATAA | 57.851 | 29.630 | 0.00 | 0.00 | 0.00 | 1.90 |
1763 | 2231 | 7.763528 | GGTCCACAAATGCAAAATATTCACATA | 59.236 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
1764 | 2232 | 6.594937 | GGTCCACAAATGCAAAATATTCACAT | 59.405 | 34.615 | 0.00 | 0.00 | 0.00 | 3.21 |
1765 | 2233 | 5.931146 | GGTCCACAAATGCAAAATATTCACA | 59.069 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
1766 | 2234 | 5.931146 | TGGTCCACAAATGCAAAATATTCAC | 59.069 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1767 | 2235 | 5.931146 | GTGGTCCACAAATGCAAAATATTCA | 59.069 | 36.000 | 17.59 | 0.00 | 34.08 | 2.57 |
1768 | 2236 | 5.351189 | GGTGGTCCACAAATGCAAAATATTC | 59.649 | 40.000 | 23.48 | 0.00 | 35.86 | 1.75 |
1769 | 2237 | 5.221803 | TGGTGGTCCACAAATGCAAAATATT | 60.222 | 36.000 | 23.48 | 0.00 | 39.03 | 1.28 |
1770 | 2238 | 4.285517 | TGGTGGTCCACAAATGCAAAATAT | 59.714 | 37.500 | 23.48 | 0.00 | 39.03 | 1.28 |
1771 | 2239 | 3.643320 | TGGTGGTCCACAAATGCAAAATA | 59.357 | 39.130 | 23.48 | 0.00 | 39.03 | 1.40 |
1772 | 2240 | 2.437281 | TGGTGGTCCACAAATGCAAAAT | 59.563 | 40.909 | 23.48 | 0.00 | 39.03 | 1.82 |
1773 | 2241 | 1.833630 | TGGTGGTCCACAAATGCAAAA | 59.166 | 42.857 | 23.48 | 0.00 | 39.03 | 2.44 |
1774 | 2242 | 1.489481 | TGGTGGTCCACAAATGCAAA | 58.511 | 45.000 | 23.48 | 0.00 | 39.03 | 3.68 |
1775 | 2243 | 3.214023 | TGGTGGTCCACAAATGCAA | 57.786 | 47.368 | 23.48 | 0.00 | 39.03 | 4.08 |
1784 | 2252 | 0.899253 | CAACATGCCATGGTGGTCCA | 60.899 | 55.000 | 15.08 | 2.10 | 44.17 | 4.02 |
1785 | 2253 | 1.892338 | CAACATGCCATGGTGGTCC | 59.108 | 57.895 | 15.08 | 0.00 | 44.17 | 4.46 |
1790 | 2258 | 0.396139 | CTAGCCCAACATGCCATGGT | 60.396 | 55.000 | 14.67 | 0.00 | 34.79 | 3.55 |
1791 | 2259 | 1.741327 | GCTAGCCCAACATGCCATGG | 61.741 | 60.000 | 7.63 | 7.63 | 36.42 | 3.66 |
1792 | 2260 | 0.754217 | AGCTAGCCCAACATGCCATG | 60.754 | 55.000 | 12.13 | 2.40 | 0.00 | 3.66 |
1793 | 2261 | 0.846015 | TAGCTAGCCCAACATGCCAT | 59.154 | 50.000 | 12.13 | 0.00 | 0.00 | 4.40 |
1794 | 2262 | 0.107214 | GTAGCTAGCCCAACATGCCA | 60.107 | 55.000 | 12.13 | 0.00 | 0.00 | 4.92 |
1795 | 2263 | 1.160329 | CGTAGCTAGCCCAACATGCC | 61.160 | 60.000 | 12.13 | 0.00 | 0.00 | 4.40 |
1796 | 2264 | 2.311294 | CGTAGCTAGCCCAACATGC | 58.689 | 57.895 | 12.13 | 0.00 | 0.00 | 4.06 |
2007 | 2485 | 2.910479 | ACAGCGACGACAGGGACA | 60.910 | 61.111 | 0.00 | 0.00 | 0.00 | 4.02 |
2239 | 2735 | 3.476646 | CTGCTGCTCTGCGTCGTG | 61.477 | 66.667 | 0.00 | 0.00 | 35.36 | 4.35 |
2359 | 2855 | 0.827925 | AGTCGGACCACTTGAGCTCA | 60.828 | 55.000 | 13.74 | 13.74 | 0.00 | 4.26 |
2400 | 2896 | 2.596851 | CCCTGCTGGTGGTACTGCT | 61.597 | 63.158 | 9.00 | 0.00 | 36.43 | 4.24 |
2488 | 2984 | 1.909700 | TCAAGCACCAGTTGATTCCC | 58.090 | 50.000 | 0.00 | 0.00 | 28.74 | 3.97 |
2491 | 2987 | 5.069516 | AGTTCAATTCAAGCACCAGTTGATT | 59.930 | 36.000 | 0.00 | 0.00 | 33.95 | 2.57 |
2530 | 3030 | 4.323477 | CCGGCCTTTGGTGTCGGA | 62.323 | 66.667 | 0.00 | 0.00 | 42.94 | 4.55 |
2578 | 3078 | 6.037062 | CGTTACAATCTGGATCTTTGCATGTA | 59.963 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
2630 | 3130 | 7.745620 | AACCTCACCAAACATTTCTTAGTAG | 57.254 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2716 | 3229 | 6.860080 | ACAGATCAATCAATCAATCACCAAC | 58.140 | 36.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2750 | 3267 | 5.699001 | TGTTCGTCATATGCACTTTTACACT | 59.301 | 36.000 | 0.00 | 0.00 | 0.00 | 3.55 |
2810 | 3330 | 7.195374 | TCAAACACCTTTATATAGCAGGAGT | 57.805 | 36.000 | 14.32 | 10.60 | 33.39 | 3.85 |
2966 | 3492 | 5.010617 | ACCAATCACCAAAAAGTAAAGCGAT | 59.989 | 36.000 | 0.00 | 0.00 | 0.00 | 4.58 |
2976 | 3502 | 3.070734 | CCACCATCACCAATCACCAAAAA | 59.929 | 43.478 | 0.00 | 0.00 | 0.00 | 1.94 |
2998 | 3524 | 0.665369 | CACGTACGGGACCAACACTC | 60.665 | 60.000 | 21.06 | 0.00 | 0.00 | 3.51 |
2999 | 3525 | 1.364901 | CACGTACGGGACCAACACT | 59.635 | 57.895 | 21.06 | 0.00 | 0.00 | 3.55 |
3036 | 3562 | 1.083080 | CAAATTGACGCACGCACGA | 60.083 | 52.632 | 4.54 | 0.00 | 36.70 | 4.35 |
3037 | 3563 | 2.074353 | CCAAATTGACGCACGCACG | 61.074 | 57.895 | 0.00 | 0.00 | 39.50 | 5.34 |
3038 | 3564 | 0.996727 | GACCAAATTGACGCACGCAC | 60.997 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
3039 | 3565 | 1.281353 | GACCAAATTGACGCACGCA | 59.719 | 52.632 | 0.00 | 0.00 | 0.00 | 5.24 |
3146 | 3676 | 1.448985 | TTCACTGTGATTAAGCCGGC | 58.551 | 50.000 | 21.89 | 21.89 | 0.00 | 6.13 |
3195 | 3738 | 7.041848 | GCACCTTCTAACAAAATTCAAAAGCAT | 60.042 | 33.333 | 0.00 | 0.00 | 0.00 | 3.79 |
3262 | 3806 | 5.934781 | AGTCTTTTCCTGTTGAGTGAGATT | 58.065 | 37.500 | 0.00 | 0.00 | 0.00 | 2.40 |
3265 | 3809 | 4.954875 | AGAGTCTTTTCCTGTTGAGTGAG | 58.045 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
3266 | 3810 | 4.499865 | CGAGAGTCTTTTCCTGTTGAGTGA | 60.500 | 45.833 | 0.00 | 0.00 | 0.00 | 3.41 |
3267 | 3811 | 3.738282 | CGAGAGTCTTTTCCTGTTGAGTG | 59.262 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
3268 | 3812 | 3.800604 | GCGAGAGTCTTTTCCTGTTGAGT | 60.801 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
3269 | 3813 | 2.734079 | GCGAGAGTCTTTTCCTGTTGAG | 59.266 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3270 | 3814 | 2.365617 | AGCGAGAGTCTTTTCCTGTTGA | 59.634 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
3271 | 3815 | 2.734079 | GAGCGAGAGTCTTTTCCTGTTG | 59.266 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
3272 | 3816 | 2.608261 | CGAGCGAGAGTCTTTTCCTGTT | 60.608 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3273 | 3817 | 1.068194 | CGAGCGAGAGTCTTTTCCTGT | 60.068 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
3274 | 3818 | 1.623359 | CGAGCGAGAGTCTTTTCCTG | 58.377 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
3275 | 3819 | 0.109039 | GCGAGCGAGAGTCTTTTCCT | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
3276 | 3820 | 1.406970 | CGCGAGCGAGAGTCTTTTCC | 61.407 | 60.000 | 12.58 | 0.00 | 42.83 | 3.13 |
3277 | 3821 | 0.729816 | ACGCGAGCGAGAGTCTTTTC | 60.730 | 55.000 | 24.72 | 0.00 | 42.83 | 2.29 |
3278 | 3822 | 0.729816 | GACGCGAGCGAGAGTCTTTT | 60.730 | 55.000 | 24.72 | 0.00 | 42.83 | 2.27 |
3279 | 3823 | 1.154188 | GACGCGAGCGAGAGTCTTT | 60.154 | 57.895 | 24.72 | 0.00 | 42.83 | 2.52 |
3280 | 3824 | 2.481464 | GACGCGAGCGAGAGTCTT | 59.519 | 61.111 | 24.72 | 0.00 | 42.83 | 3.01 |
3281 | 3825 | 3.855589 | CGACGCGAGCGAGAGTCT | 61.856 | 66.667 | 24.72 | 0.00 | 42.83 | 3.24 |
3300 | 3844 | 3.465403 | CTGAGTCGCCCCCTGGAG | 61.465 | 72.222 | 0.00 | 0.00 | 0.00 | 3.86 |
3335 | 3879 | 4.467107 | AGGAGGGAGGTCGAGGGC | 62.467 | 72.222 | 0.00 | 0.00 | 0.00 | 5.19 |
3336 | 3880 | 2.123640 | GAGGAGGGAGGTCGAGGG | 60.124 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
3337 | 3881 | 2.123640 | GGAGGAGGGAGGTCGAGG | 60.124 | 72.222 | 0.00 | 0.00 | 0.00 | 4.63 |
3338 | 3882 | 2.123640 | GGGAGGAGGGAGGTCGAG | 60.124 | 72.222 | 0.00 | 0.00 | 0.00 | 4.04 |
3339 | 3883 | 3.752167 | GGGGAGGAGGGAGGTCGA | 61.752 | 72.222 | 0.00 | 0.00 | 0.00 | 4.20 |
3340 | 3884 | 3.318922 | AAGGGGAGGAGGGAGGTCG | 62.319 | 68.421 | 0.00 | 0.00 | 0.00 | 4.79 |
3341 | 3885 | 1.383386 | GAAGGGGAGGAGGGAGGTC | 60.383 | 68.421 | 0.00 | 0.00 | 0.00 | 3.85 |
3342 | 3886 | 1.465189 | AAGAAGGGGAGGAGGGAGGT | 61.465 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3343 | 3887 | 0.692756 | GAAGAAGGGGAGGAGGGAGG | 60.693 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3344 | 3888 | 0.692756 | GGAAGAAGGGGAGGAGGGAG | 60.693 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3345 | 3889 | 1.162951 | AGGAAGAAGGGGAGGAGGGA | 61.163 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
3346 | 3890 | 0.692756 | GAGGAAGAAGGGGAGGAGGG | 60.693 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3347 | 3891 | 1.045911 | CGAGGAAGAAGGGGAGGAGG | 61.046 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3348 | 3892 | 1.681486 | GCGAGGAAGAAGGGGAGGAG | 61.681 | 65.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3349 | 3893 | 1.686110 | GCGAGGAAGAAGGGGAGGA | 60.686 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
3350 | 3894 | 2.736826 | GGCGAGGAAGAAGGGGAGG | 61.737 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
3351 | 3895 | 2.904131 | GGCGAGGAAGAAGGGGAG | 59.096 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
3352 | 3896 | 3.075005 | CGGCGAGGAAGAAGGGGA | 61.075 | 66.667 | 0.00 | 0.00 | 0.00 | 4.81 |
3353 | 3897 | 4.840005 | GCGGCGAGGAAGAAGGGG | 62.840 | 72.222 | 12.98 | 0.00 | 0.00 | 4.79 |
3354 | 3898 | 4.840005 | GGCGGCGAGGAAGAAGGG | 62.840 | 72.222 | 12.98 | 0.00 | 0.00 | 3.95 |
3355 | 3899 | 4.082523 | TGGCGGCGAGGAAGAAGG | 62.083 | 66.667 | 12.98 | 0.00 | 0.00 | 3.46 |
3356 | 3900 | 2.815647 | GTGGCGGCGAGGAAGAAG | 60.816 | 66.667 | 12.98 | 0.00 | 0.00 | 2.85 |
3357 | 3901 | 4.388499 | GGTGGCGGCGAGGAAGAA | 62.388 | 66.667 | 12.98 | 0.00 | 0.00 | 2.52 |
3363 | 3907 | 4.735132 | TTCTTCGGTGGCGGCGAG | 62.735 | 66.667 | 12.98 | 0.00 | 0.00 | 5.03 |
3364 | 3908 | 4.735132 | CTTCTTCGGTGGCGGCGA | 62.735 | 66.667 | 12.98 | 0.00 | 0.00 | 5.54 |
3366 | 3910 | 4.699522 | ACCTTCTTCGGTGGCGGC | 62.700 | 66.667 | 0.00 | 0.00 | 35.52 | 6.53 |
3367 | 3911 | 2.434359 | GACCTTCTTCGGTGGCGG | 60.434 | 66.667 | 0.00 | 0.00 | 37.42 | 6.13 |
3368 | 3912 | 2.809601 | CGACCTTCTTCGGTGGCG | 60.810 | 66.667 | 0.00 | 0.00 | 37.42 | 5.69 |
3374 | 3918 | 2.881352 | GCTCGCCGACCTTCTTCG | 60.881 | 66.667 | 0.00 | 0.00 | 38.80 | 3.79 |
3375 | 3919 | 2.881352 | CGCTCGCCGACCTTCTTC | 60.881 | 66.667 | 0.00 | 0.00 | 40.02 | 2.87 |
3376 | 3920 | 3.371063 | TCGCTCGCCGACCTTCTT | 61.371 | 61.111 | 0.00 | 0.00 | 41.89 | 2.52 |
3418 | 3962 | 2.438614 | GAAAGGAGGAAGGCCCGC | 60.439 | 66.667 | 0.00 | 0.00 | 40.87 | 6.13 |
3419 | 3963 | 0.393132 | GAAGAAAGGAGGAAGGCCCG | 60.393 | 60.000 | 0.00 | 0.00 | 40.87 | 6.13 |
3420 | 3964 | 0.698818 | TGAAGAAAGGAGGAAGGCCC | 59.301 | 55.000 | 0.00 | 0.00 | 33.31 | 5.80 |
3421 | 3965 | 1.340502 | CCTGAAGAAAGGAGGAAGGCC | 60.341 | 57.143 | 0.00 | 0.00 | 40.02 | 5.19 |
3422 | 3966 | 1.630878 | TCCTGAAGAAAGGAGGAAGGC | 59.369 | 52.381 | 0.00 | 0.00 | 41.60 | 4.35 |
3429 | 3973 | 2.482494 | GATCCCCTCCTGAAGAAAGGA | 58.518 | 52.381 | 0.00 | 0.00 | 44.35 | 3.36 |
3430 | 3974 | 1.492599 | GGATCCCCTCCTGAAGAAAGG | 59.507 | 57.143 | 0.00 | 0.00 | 41.29 | 3.11 |
3443 | 3987 | 0.473501 | ATCTCAGCCAGAGGATCCCC | 60.474 | 60.000 | 8.55 | 0.00 | 44.81 | 4.81 |
3444 | 3988 | 0.686224 | CATCTCAGCCAGAGGATCCC | 59.314 | 60.000 | 8.55 | 0.00 | 44.81 | 3.85 |
3445 | 3989 | 0.035176 | GCATCTCAGCCAGAGGATCC | 59.965 | 60.000 | 2.48 | 2.48 | 44.81 | 3.36 |
3446 | 3990 | 0.757512 | TGCATCTCAGCCAGAGGATC | 59.242 | 55.000 | 4.16 | 0.00 | 44.81 | 3.36 |
3447 | 3991 | 1.348366 | GATGCATCTCAGCCAGAGGAT | 59.652 | 52.381 | 19.70 | 0.00 | 44.81 | 3.24 |
3448 | 3992 | 0.757512 | GATGCATCTCAGCCAGAGGA | 59.242 | 55.000 | 19.70 | 0.00 | 44.81 | 3.71 |
3449 | 3993 | 0.600518 | CGATGCATCTCAGCCAGAGG | 60.601 | 60.000 | 23.73 | 0.98 | 44.81 | 3.69 |
3450 | 3994 | 0.600518 | CCGATGCATCTCAGCCAGAG | 60.601 | 60.000 | 23.73 | 5.39 | 46.14 | 3.35 |
3451 | 3995 | 1.444672 | CCGATGCATCTCAGCCAGA | 59.555 | 57.895 | 23.73 | 0.00 | 34.78 | 3.86 |
3452 | 3996 | 2.252346 | GCCGATGCATCTCAGCCAG | 61.252 | 63.158 | 23.73 | 6.81 | 37.47 | 4.85 |
3453 | 3997 | 2.203112 | GCCGATGCATCTCAGCCA | 60.203 | 61.111 | 23.73 | 0.00 | 37.47 | 4.75 |
3454 | 3998 | 3.344215 | CGCCGATGCATCTCAGCC | 61.344 | 66.667 | 23.73 | 6.93 | 37.32 | 4.85 |
3455 | 3999 | 2.587194 | ACGCCGATGCATCTCAGC | 60.587 | 61.111 | 23.73 | 20.58 | 37.32 | 4.26 |
3456 | 4000 | 1.953138 | GGACGCCGATGCATCTCAG | 60.953 | 63.158 | 23.73 | 15.89 | 37.32 | 3.35 |
3457 | 4001 | 2.106938 | GGACGCCGATGCATCTCA | 59.893 | 61.111 | 23.73 | 0.00 | 37.32 | 3.27 |
3458 | 4002 | 2.663188 | GGGACGCCGATGCATCTC | 60.663 | 66.667 | 23.73 | 14.16 | 37.32 | 2.75 |
3459 | 4003 | 3.157252 | AGGGACGCCGATGCATCT | 61.157 | 61.111 | 23.73 | 5.46 | 37.32 | 2.90 |
3460 | 4004 | 2.969238 | CAGGGACGCCGATGCATC | 60.969 | 66.667 | 17.10 | 17.10 | 37.32 | 3.91 |
3461 | 4005 | 4.552365 | CCAGGGACGCCGATGCAT | 62.552 | 66.667 | 0.00 | 0.00 | 37.32 | 3.96 |
3469 | 4013 | 4.382320 | TTGTACGCCCAGGGACGC | 62.382 | 66.667 | 10.89 | 1.43 | 0.00 | 5.19 |
3470 | 4014 | 2.433664 | GTTGTACGCCCAGGGACG | 60.434 | 66.667 | 10.89 | 15.30 | 0.00 | 4.79 |
3471 | 4015 | 1.024579 | CATGTTGTACGCCCAGGGAC | 61.025 | 60.000 | 10.89 | 0.00 | 0.00 | 4.46 |
3472 | 4016 | 1.298340 | CATGTTGTACGCCCAGGGA | 59.702 | 57.895 | 10.89 | 0.00 | 0.00 | 4.20 |
3473 | 4017 | 1.748879 | CCATGTTGTACGCCCAGGG | 60.749 | 63.158 | 0.00 | 0.00 | 0.00 | 4.45 |
3474 | 4018 | 0.744414 | CTCCATGTTGTACGCCCAGG | 60.744 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
3475 | 4019 | 0.744414 | CCTCCATGTTGTACGCCCAG | 60.744 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
3476 | 4020 | 1.298340 | CCTCCATGTTGTACGCCCA | 59.702 | 57.895 | 0.00 | 0.00 | 0.00 | 5.36 |
3477 | 4021 | 2.112815 | GCCTCCATGTTGTACGCCC | 61.113 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
3478 | 4022 | 2.461110 | CGCCTCCATGTTGTACGCC | 61.461 | 63.158 | 0.00 | 0.00 | 0.00 | 5.68 |
3479 | 4023 | 2.461110 | CCGCCTCCATGTTGTACGC | 61.461 | 63.158 | 0.00 | 0.00 | 0.00 | 4.42 |
3480 | 4024 | 0.806102 | CTCCGCCTCCATGTTGTACG | 60.806 | 60.000 | 0.00 | 0.00 | 0.00 | 3.67 |
3481 | 4025 | 0.249398 | ACTCCGCCTCCATGTTGTAC | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3482 | 4026 | 0.981183 | AACTCCGCCTCCATGTTGTA | 59.019 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
3483 | 4027 | 0.606401 | CAACTCCGCCTCCATGTTGT | 60.606 | 55.000 | 0.00 | 0.00 | 34.91 | 3.32 |
3484 | 4028 | 1.308069 | CCAACTCCGCCTCCATGTTG | 61.308 | 60.000 | 0.00 | 0.00 | 38.08 | 3.33 |
3485 | 4029 | 1.002134 | CCAACTCCGCCTCCATGTT | 60.002 | 57.895 | 0.00 | 0.00 | 0.00 | 2.71 |
3486 | 4030 | 2.671070 | CCAACTCCGCCTCCATGT | 59.329 | 61.111 | 0.00 | 0.00 | 0.00 | 3.21 |
3487 | 4031 | 2.825836 | GCCAACTCCGCCTCCATG | 60.826 | 66.667 | 0.00 | 0.00 | 0.00 | 3.66 |
3488 | 4032 | 4.473520 | CGCCAACTCCGCCTCCAT | 62.474 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.