Multiple sequence alignment - TraesCS2B01G176900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G176900 chr2B 100.000 3134 0 0 1 3134 151905431 151902298 0.000000e+00 5788
1 TraesCS2B01G176900 chr2A 92.179 2698 126 39 1 2650 99789779 99787119 0.000000e+00 3735
2 TraesCS2B01G176900 chr2D 92.006 2702 138 39 1 2650 100186892 100184217 0.000000e+00 3722
3 TraesCS2B01G176900 chr7D 90.854 492 32 5 2653 3132 409604851 409605341 0.000000e+00 647
4 TraesCS2B01G176900 chr4A 88.272 324 36 2 1200 1522 202222054 202221732 1.360000e-103 387
5 TraesCS2B01G176900 chr5B 86.704 361 29 9 2790 3132 462257284 462257643 1.760000e-102 383
6 TraesCS2B01G176900 chr6D 92.683 164 10 2 2651 2812 101720513 101720350 5.230000e-58 235
7 TraesCS2B01G176900 chr1D 92.638 163 10 2 2652 2812 24217333 24217171 1.880000e-57 233
8 TraesCS2B01G176900 chr4B 92.405 158 11 1 2651 2807 534954541 534954384 1.130000e-54 224
9 TraesCS2B01G176900 chr7A 96.269 134 5 0 2669 2802 732393007 732393140 1.460000e-53 220


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G176900 chr2B 151902298 151905431 3133 True 5788 5788 100.000 1 3134 1 chr2B.!!$R1 3133
1 TraesCS2B01G176900 chr2A 99787119 99789779 2660 True 3735 3735 92.179 1 2650 1 chr2A.!!$R1 2649
2 TraesCS2B01G176900 chr2D 100184217 100186892 2675 True 3722 3722 92.006 1 2650 1 chr2D.!!$R1 2649

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
583 618 1.51185 CATCCTCAACGTGTCTTGCA 58.488 50.0 0.0 0.0 0.0 4.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2253 2304 0.930726 TTCCAAGTCCCAACCCTGTT 59.069 50.0 0.0 0.0 0.0 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
106 122 9.123709 GTTGCATAAAAATTTGTCATAACGAGA 57.876 29.630 0.00 0.00 0.00 4.04
123 139 3.515901 ACGAGATTAGAGAATATGCCCCC 59.484 47.826 0.00 0.00 0.00 5.40
131 147 2.081585 GAATATGCCCCCACCTCCCC 62.082 65.000 0.00 0.00 0.00 4.81
145 161 2.269520 CTCCCCGAATGCACATCCCA 62.270 60.000 0.00 0.00 0.00 4.37
147 163 2.472059 CCCGAATGCACATCCCACG 61.472 63.158 0.00 0.00 0.00 4.94
148 164 1.745115 CCGAATGCACATCCCACGT 60.745 57.895 0.00 0.00 0.00 4.49
173 189 2.528127 TCCACCCCTTGCTTCCGA 60.528 61.111 0.00 0.00 0.00 4.55
205 221 8.557029 CCTTCGTGGGTATAACTTTGATTTATC 58.443 37.037 0.00 0.00 0.00 1.75
350 369 4.946160 TGGGGAAGTAAACATGAAGGAT 57.054 40.909 0.00 0.00 0.00 3.24
360 379 8.268850 AGTAAACATGAAGGATATGTGTTCAC 57.731 34.615 0.00 0.00 38.67 3.18
368 387 5.078411 AGGATATGTGTTCACTGTGAGAC 57.922 43.478 10.77 11.87 0.00 3.36
403 422 9.757227 CACTAGGGAAAATCAAAACACATAAAA 57.243 29.630 0.00 0.00 0.00 1.52
433 452 1.725931 CGACCAGCGAGAATTGTTTGC 60.726 52.381 0.00 0.00 44.57 3.68
436 455 1.536766 CCAGCGAGAATTGTTTGCAGA 59.463 47.619 4.08 0.00 0.00 4.26
458 477 4.426704 AGGTGACTAGTAAGTTGGTGGAT 58.573 43.478 0.00 0.00 40.61 3.41
460 479 5.421374 AGGTGACTAGTAAGTTGGTGGATAC 59.579 44.000 0.00 0.00 40.61 2.24
494 513 6.030228 GCTAACCACTATGCAAAGAAACATC 58.970 40.000 0.00 0.00 0.00 3.06
505 524 4.261572 GCAAAGAAACATCTGTGCCTACAA 60.262 41.667 9.38 0.00 43.35 2.41
517 536 3.278574 GTGCCTACAATTGCCACATCTA 58.721 45.455 5.05 0.00 0.00 1.98
583 618 1.511850 CATCCTCAACGTGTCTTGCA 58.488 50.000 0.00 0.00 0.00 4.08
605 640 2.480419 CAGAACTGTGATTGACGAACCC 59.520 50.000 0.00 0.00 0.00 4.11
670 708 7.532682 TTGCAAAGTCAAAGTAATTGGTTTC 57.467 32.000 0.00 0.00 39.62 2.78
710 748 1.875963 GGTTTCGTGGATGGCTGTG 59.124 57.895 0.00 0.00 0.00 3.66
793 837 5.796350 AATAGTACAACTTTGGCATCGTC 57.204 39.130 0.00 0.00 0.00 4.20
832 876 1.719529 TTCCGAACTTGGGAGGTACA 58.280 50.000 0.00 0.00 34.45 2.90
834 878 2.262637 TCCGAACTTGGGAGGTACATT 58.737 47.619 0.00 0.00 0.00 2.71
836 880 3.839490 TCCGAACTTGGGAGGTACATTAA 59.161 43.478 0.00 0.00 0.00 1.40
918 962 2.436824 GGGCGAGAGAAACCCAGC 60.437 66.667 0.00 0.00 43.64 4.85
1116 1160 2.126189 GTCCCGTTCCTCGAACCG 60.126 66.667 0.00 0.00 39.14 4.44
1332 1376 2.570181 CAGTACGACACGGACCCC 59.430 66.667 2.83 0.00 42.35 4.95
1569 1613 1.059058 CGACTCCGACGACGAAGAG 59.941 63.158 9.28 10.16 42.66 2.85
1863 1913 1.291877 CCGAGCCACTCAAGTTTCCG 61.292 60.000 0.00 0.00 0.00 4.30
1888 1938 0.667792 GTCACCGCAGTCAGGAGTTC 60.668 60.000 0.00 0.00 0.00 3.01
1995 2045 2.129555 AACTTCCTGAGCCGCCACAT 62.130 55.000 0.00 0.00 0.00 3.21
2198 2249 5.884792 AGAATTCTTGCTACAATTCTGAGGG 59.115 40.000 9.79 0.00 44.25 4.30
2211 2262 7.690256 ACAATTCTGAGGGTAGATGTTTAGTT 58.310 34.615 0.00 0.00 0.00 2.24
2244 2295 6.964908 TCAACATTTTCTCGTGCATAAAAGA 58.035 32.000 0.00 0.00 0.00 2.52
2245 2296 6.855914 TCAACATTTTCTCGTGCATAAAAGAC 59.144 34.615 0.00 0.00 0.00 3.01
2246 2297 6.560253 ACATTTTCTCGTGCATAAAAGACT 57.440 33.333 0.00 0.00 0.00 3.24
2253 2304 8.766000 TTCTCGTGCATAAAAGACTATTGTTA 57.234 30.769 0.00 0.00 0.00 2.41
2256 2307 8.312896 TCGTGCATAAAAGACTATTGTTAACA 57.687 30.769 3.59 3.59 0.00 2.41
2318 2369 4.195416 TGTTCATGTGATATTTAGCCGCA 58.805 39.130 0.00 0.00 0.00 5.69
2321 2372 3.247411 TCATGTGATATTTAGCCGCAACG 59.753 43.478 0.00 0.00 0.00 4.10
2332 2383 3.734776 AGCCGCAACGTATTTCTTTAC 57.265 42.857 0.00 0.00 0.00 2.01
2364 2415 4.155826 TGTTGTCCTCTGTTTTGAAGTGTG 59.844 41.667 0.00 0.00 0.00 3.82
2374 2425 5.342433 TGTTTTGAAGTGTGATGCTTTGAG 58.658 37.500 0.00 0.00 0.00 3.02
2380 2431 0.955428 TGTGATGCTTTGAGCGGACC 60.955 55.000 0.00 0.00 46.26 4.46
2384 2435 2.358247 GCTTTGAGCGGACCGGAA 60.358 61.111 17.22 0.00 0.00 4.30
2413 2464 2.816087 TGATGGAAAGCTTGAGCACTTC 59.184 45.455 0.00 7.39 45.16 3.01
2415 2466 0.519077 GGAAAGCTTGAGCACTTCCG 59.481 55.000 16.31 0.00 41.87 4.30
2455 2509 6.115450 CACAGATTGTGGTCATTCAGTATG 57.885 41.667 1.31 0.00 44.27 2.39
2456 2510 5.645067 CACAGATTGTGGTCATTCAGTATGT 59.355 40.000 1.31 0.00 44.27 2.29
2464 2518 8.212317 TGTGGTCATTCAGTATGTTATCATTG 57.788 34.615 0.00 0.00 37.40 2.82
2507 2561 7.589958 AGAGGTTAGATATGTTCAGTACTGG 57.410 40.000 22.48 4.59 0.00 4.00
2514 2568 7.004555 AGATATGTTCAGTACTGGTTGTCAA 57.995 36.000 22.48 5.71 0.00 3.18
2515 2569 7.624549 AGATATGTTCAGTACTGGTTGTCAAT 58.375 34.615 22.48 8.12 0.00 2.57
2517 2571 9.547753 GATATGTTCAGTACTGGTTGTCAATAT 57.452 33.333 22.48 13.42 0.00 1.28
2519 2573 8.948631 ATGTTCAGTACTGGTTGTCAATATAG 57.051 34.615 22.48 0.00 0.00 1.31
2520 2574 7.903145 TGTTCAGTACTGGTTGTCAATATAGT 58.097 34.615 22.48 0.00 0.00 2.12
2522 2576 7.712204 TCAGTACTGGTTGTCAATATAGTCA 57.288 36.000 22.48 0.00 0.00 3.41
2541 2595 4.646492 AGTCAAAGGTCATGGAATTATGGC 59.354 41.667 0.00 0.00 31.98 4.40
2546 2600 4.927049 AGGTCATGGAATTATGGCATAGG 58.073 43.478 7.35 0.00 34.40 2.57
2567 2621 3.506067 GGAAACCAGTGGTTAATCTGTGG 59.494 47.826 27.62 5.62 46.20 4.17
2568 2622 4.394729 GAAACCAGTGGTTAATCTGTGGA 58.605 43.478 27.62 0.00 46.20 4.02
2569 2623 3.703001 ACCAGTGGTTAATCTGTGGAG 57.297 47.619 9.70 0.00 27.29 3.86
2570 2624 2.290323 ACCAGTGGTTAATCTGTGGAGC 60.290 50.000 9.70 0.00 27.29 4.70
2571 2625 2.290260 CCAGTGGTTAATCTGTGGAGCA 60.290 50.000 0.00 0.00 0.00 4.26
2572 2626 3.005554 CAGTGGTTAATCTGTGGAGCAG 58.994 50.000 0.00 0.00 46.34 4.24
2573 2627 1.740025 GTGGTTAATCTGTGGAGCAGC 59.260 52.381 0.00 0.00 44.66 5.25
2574 2628 1.340017 TGGTTAATCTGTGGAGCAGCC 60.340 52.381 0.00 0.00 44.66 4.85
2602 2656 5.005586 CAGCATGGTTGTTTAACTTGTGTTG 59.994 40.000 0.00 0.00 37.59 3.33
2603 2657 5.105554 AGCATGGTTGTTTAACTTGTGTTGA 60.106 36.000 0.00 0.00 37.59 3.18
2604 2658 5.752955 GCATGGTTGTTTAACTTGTGTTGAT 59.247 36.000 0.00 0.00 37.59 2.57
2605 2659 6.074356 GCATGGTTGTTTAACTTGTGTTGATC 60.074 38.462 0.00 0.00 37.59 2.92
2606 2660 5.574082 TGGTTGTTTAACTTGTGTTGATCG 58.426 37.500 0.00 0.00 37.59 3.69
2607 2661 5.124138 TGGTTGTTTAACTTGTGTTGATCGT 59.876 36.000 0.00 0.00 37.59 3.73
2608 2662 5.454232 GGTTGTTTAACTTGTGTTGATCGTG 59.546 40.000 0.00 0.00 37.59 4.35
2609 2663 6.252281 GTTGTTTAACTTGTGTTGATCGTGA 58.748 36.000 0.00 0.00 37.59 4.35
2632 2688 6.723515 TGATTCATGACCCTGTTTATTTTCCA 59.276 34.615 0.00 0.00 0.00 3.53
2638 2694 6.310941 TGACCCTGTTTATTTTCCATGAAGA 58.689 36.000 0.00 0.00 0.00 2.87
2643 2699 7.362401 CCCTGTTTATTTTCCATGAAGACTGAG 60.362 40.741 0.00 0.00 0.00 3.35
2650 2706 6.968131 TTTCCATGAAGACTGAGAATTACG 57.032 37.500 0.00 0.00 0.00 3.18
2651 2707 5.914898 TCCATGAAGACTGAGAATTACGA 57.085 39.130 0.00 0.00 0.00 3.43
2652 2708 5.895928 TCCATGAAGACTGAGAATTACGAG 58.104 41.667 0.00 0.00 0.00 4.18
2653 2709 5.419155 TCCATGAAGACTGAGAATTACGAGT 59.581 40.000 0.00 0.00 0.00 4.18
2654 2710 5.518128 CCATGAAGACTGAGAATTACGAGTG 59.482 44.000 0.00 0.00 0.00 3.51
2655 2711 4.486090 TGAAGACTGAGAATTACGAGTGC 58.514 43.478 0.00 0.00 0.00 4.40
2656 2712 3.512033 AGACTGAGAATTACGAGTGCC 57.488 47.619 0.00 0.00 0.00 5.01
2657 2713 2.159366 AGACTGAGAATTACGAGTGCCG 60.159 50.000 0.00 0.00 45.44 5.69
2658 2714 1.816835 ACTGAGAATTACGAGTGCCGA 59.183 47.619 0.00 0.00 41.76 5.54
2659 2715 2.427453 ACTGAGAATTACGAGTGCCGAT 59.573 45.455 0.00 0.00 41.76 4.18
2660 2716 3.119101 ACTGAGAATTACGAGTGCCGATT 60.119 43.478 0.00 0.00 41.76 3.34
2661 2717 3.857052 TGAGAATTACGAGTGCCGATTT 58.143 40.909 0.00 0.00 41.76 2.17
2662 2718 4.250464 TGAGAATTACGAGTGCCGATTTT 58.750 39.130 0.00 0.00 41.76 1.82
2663 2719 4.328983 TGAGAATTACGAGTGCCGATTTTC 59.671 41.667 0.00 0.00 41.76 2.29
2664 2720 4.250464 AGAATTACGAGTGCCGATTTTCA 58.750 39.130 0.00 0.00 41.76 2.69
2665 2721 4.330074 AGAATTACGAGTGCCGATTTTCAG 59.670 41.667 0.00 0.00 41.76 3.02
2666 2722 3.306917 TTACGAGTGCCGATTTTCAGA 57.693 42.857 0.00 0.00 41.76 3.27
2667 2723 1.714794 ACGAGTGCCGATTTTCAGAG 58.285 50.000 0.00 0.00 41.76 3.35
2668 2724 1.002366 CGAGTGCCGATTTTCAGAGG 58.998 55.000 0.00 0.00 41.76 3.69
2671 2727 3.102097 GCCGATTTTCAGAGGCCG 58.898 61.111 0.00 0.00 43.54 6.13
2672 2728 1.449601 GCCGATTTTCAGAGGCCGA 60.450 57.895 0.00 0.00 43.54 5.54
2673 2729 1.432270 GCCGATTTTCAGAGGCCGAG 61.432 60.000 0.00 0.00 43.54 4.63
2674 2730 1.432270 CCGATTTTCAGAGGCCGAGC 61.432 60.000 0.00 0.00 0.00 5.03
2690 2746 3.078836 GCCACAGGTAGGCCGGTA 61.079 66.667 1.90 0.00 46.50 4.02
2691 2747 2.440817 GCCACAGGTAGGCCGGTAT 61.441 63.158 1.90 0.00 46.50 2.73
2692 2748 1.746517 CCACAGGTAGGCCGGTATC 59.253 63.158 1.90 0.00 41.23 2.24
2693 2749 1.046472 CCACAGGTAGGCCGGTATCA 61.046 60.000 1.90 0.00 41.23 2.15
2694 2750 1.048601 CACAGGTAGGCCGGTATCAT 58.951 55.000 1.90 0.00 41.23 2.45
2695 2751 1.048601 ACAGGTAGGCCGGTATCATG 58.951 55.000 1.90 2.27 41.37 3.07
2696 2752 0.321671 CAGGTAGGCCGGTATCATGG 59.678 60.000 1.90 0.00 40.50 3.66
2697 2753 0.836400 AGGTAGGCCGGTATCATGGG 60.836 60.000 1.90 0.00 40.50 4.00
2701 2757 2.665185 GCCGGTATCATGGGCGTC 60.665 66.667 1.90 0.00 37.06 5.19
2702 2758 2.030562 CCGGTATCATGGGCGTCC 59.969 66.667 0.00 0.00 0.00 4.79
2703 2759 2.355837 CGGTATCATGGGCGTCCG 60.356 66.667 0.00 0.00 35.24 4.79
2704 2760 2.819550 GGTATCATGGGCGTCCGT 59.180 61.111 0.00 0.00 35.24 4.69
2705 2761 1.145377 GGTATCATGGGCGTCCGTT 59.855 57.895 0.00 0.00 35.24 4.44
2706 2762 0.463116 GGTATCATGGGCGTCCGTTT 60.463 55.000 0.00 0.00 35.24 3.60
2707 2763 0.655733 GTATCATGGGCGTCCGTTTG 59.344 55.000 0.00 0.00 35.24 2.93
2708 2764 0.462937 TATCATGGGCGTCCGTTTGG 60.463 55.000 0.00 0.00 35.24 3.28
2709 2765 3.439540 CATGGGCGTCCGTTTGGG 61.440 66.667 0.00 0.00 35.24 4.12
2714 2770 4.038080 GCGTCCGTTTGGGCCTTG 62.038 66.667 4.53 0.00 36.06 3.61
2715 2771 3.361977 CGTCCGTTTGGGCCTTGG 61.362 66.667 4.53 0.90 36.06 3.61
2716 2772 2.989253 GTCCGTTTGGGCCTTGGG 60.989 66.667 4.53 0.67 31.90 4.12
2717 2773 3.179339 TCCGTTTGGGCCTTGGGA 61.179 61.111 4.53 3.42 35.24 4.37
2718 2774 2.037208 CCGTTTGGGCCTTGGGAT 59.963 61.111 4.53 0.00 0.00 3.85
2719 2775 2.350458 CCGTTTGGGCCTTGGGATG 61.350 63.158 4.53 0.00 0.00 3.51
2720 2776 1.606313 CGTTTGGGCCTTGGGATGT 60.606 57.895 4.53 0.00 0.00 3.06
2721 2777 1.876497 CGTTTGGGCCTTGGGATGTG 61.876 60.000 4.53 0.00 0.00 3.21
2722 2778 1.912763 TTTGGGCCTTGGGATGTGC 60.913 57.895 4.53 0.00 0.00 4.57
2723 2779 2.669744 TTTGGGCCTTGGGATGTGCA 62.670 55.000 4.53 0.00 0.00 4.57
2724 2780 2.042639 GGGCCTTGGGATGTGCAT 60.043 61.111 0.84 0.00 0.00 3.96
2725 2781 2.129785 GGGCCTTGGGATGTGCATC 61.130 63.158 0.84 3.71 37.11 3.91
2733 2789 4.941609 GATGTGCATCCCGTCTGT 57.058 55.556 0.00 0.00 31.76 3.41
2734 2790 2.387309 GATGTGCATCCCGTCTGTG 58.613 57.895 0.00 0.00 31.76 3.66
2735 2791 1.078214 ATGTGCATCCCGTCTGTGG 60.078 57.895 0.00 0.00 0.00 4.17
2742 2798 4.704833 CCCGTCTGTGGGTGGCAG 62.705 72.222 0.00 0.00 44.76 4.85
2743 2799 4.704833 CCGTCTGTGGGTGGCAGG 62.705 72.222 0.00 0.00 34.89 4.85
2747 2803 3.329889 CTGTGGGTGGCAGGCCTA 61.330 66.667 3.98 0.00 36.94 3.93
2748 2804 2.613696 TGTGGGTGGCAGGCCTAT 60.614 61.111 3.98 0.00 36.94 2.57
2749 2805 2.124151 GTGGGTGGCAGGCCTATG 60.124 66.667 3.98 0.00 36.94 2.23
2750 2806 4.127744 TGGGTGGCAGGCCTATGC 62.128 66.667 3.98 6.70 45.74 3.14
2756 2812 4.643795 GCAGGCCTATGCAGTGAA 57.356 55.556 3.98 0.00 45.77 3.18
2757 2813 2.872408 GCAGGCCTATGCAGTGAAA 58.128 52.632 3.98 0.00 45.77 2.69
2758 2814 1.396653 GCAGGCCTATGCAGTGAAAT 58.603 50.000 3.98 0.00 45.77 2.17
2759 2815 2.575532 GCAGGCCTATGCAGTGAAATA 58.424 47.619 3.98 0.00 45.77 1.40
2760 2816 2.291741 GCAGGCCTATGCAGTGAAATAC 59.708 50.000 3.98 0.00 45.77 1.89
2761 2817 3.544684 CAGGCCTATGCAGTGAAATACA 58.455 45.455 3.98 0.00 40.13 2.29
2762 2818 3.562973 CAGGCCTATGCAGTGAAATACAG 59.437 47.826 3.98 0.00 40.13 2.74
2763 2819 2.880890 GGCCTATGCAGTGAAATACAGG 59.119 50.000 0.00 0.00 40.13 4.00
2764 2820 2.291741 GCCTATGCAGTGAAATACAGGC 59.708 50.000 0.00 0.00 36.63 4.85
2765 2821 2.880890 CCTATGCAGTGAAATACAGGCC 59.119 50.000 0.00 0.00 32.75 5.19
2766 2822 1.382522 ATGCAGTGAAATACAGGCCG 58.617 50.000 0.00 0.00 32.75 6.13
2767 2823 1.305219 TGCAGTGAAATACAGGCCGC 61.305 55.000 0.00 0.00 32.75 6.53
2768 2824 1.715585 CAGTGAAATACAGGCCGCG 59.284 57.895 0.00 0.00 0.00 6.46
2769 2825 0.739462 CAGTGAAATACAGGCCGCGA 60.739 55.000 8.23 0.00 0.00 5.87
2770 2826 0.178068 AGTGAAATACAGGCCGCGAT 59.822 50.000 8.23 0.00 0.00 4.58
2771 2827 1.411246 AGTGAAATACAGGCCGCGATA 59.589 47.619 8.23 0.00 0.00 2.92
2772 2828 1.525619 GTGAAATACAGGCCGCGATAC 59.474 52.381 8.23 0.00 0.00 2.24
2773 2829 0.782384 GAAATACAGGCCGCGATACG 59.218 55.000 8.23 0.00 43.15 3.06
2782 2838 2.561885 CGCGATACGGCTAGGGAG 59.438 66.667 0.00 0.00 38.44 4.30
2783 2839 2.259439 CGCGATACGGCTAGGGAGT 61.259 63.158 0.00 0.00 38.44 3.85
2784 2840 1.286260 GCGATACGGCTAGGGAGTG 59.714 63.158 0.00 0.00 0.00 3.51
2785 2841 1.453762 GCGATACGGCTAGGGAGTGT 61.454 60.000 0.00 0.00 0.00 3.55
2786 2842 0.311165 CGATACGGCTAGGGAGTGTG 59.689 60.000 0.00 0.00 0.00 3.82
2787 2843 1.400737 GATACGGCTAGGGAGTGTGT 58.599 55.000 0.00 0.00 0.00 3.72
2788 2844 2.579873 GATACGGCTAGGGAGTGTGTA 58.420 52.381 0.00 0.00 0.00 2.90
2789 2845 2.048444 TACGGCTAGGGAGTGTGTAG 57.952 55.000 0.00 0.00 0.00 2.74
2790 2846 0.683504 ACGGCTAGGGAGTGTGTAGG 60.684 60.000 0.00 0.00 0.00 3.18
2791 2847 1.823976 GGCTAGGGAGTGTGTAGGC 59.176 63.158 0.00 0.00 32.85 3.93
2792 2848 1.437986 GCTAGGGAGTGTGTAGGCG 59.562 63.158 0.00 0.00 0.00 5.52
2793 2849 1.321074 GCTAGGGAGTGTGTAGGCGT 61.321 60.000 0.00 0.00 0.00 5.68
2794 2850 2.020694 GCTAGGGAGTGTGTAGGCGTA 61.021 57.143 0.00 0.00 0.00 4.42
2795 2851 2.584236 CTAGGGAGTGTGTAGGCGTAT 58.416 52.381 0.00 0.00 0.00 3.06
2796 2852 1.861982 AGGGAGTGTGTAGGCGTATT 58.138 50.000 0.00 0.00 0.00 1.89
2797 2853 1.480954 AGGGAGTGTGTAGGCGTATTG 59.519 52.381 0.00 0.00 0.00 1.90
2798 2854 1.206371 GGGAGTGTGTAGGCGTATTGT 59.794 52.381 0.00 0.00 0.00 2.71
2799 2855 2.268298 GGAGTGTGTAGGCGTATTGTG 58.732 52.381 0.00 0.00 0.00 3.33
2800 2856 2.353406 GGAGTGTGTAGGCGTATTGTGT 60.353 50.000 0.00 0.00 0.00 3.72
2801 2857 2.666508 GAGTGTGTAGGCGTATTGTGTG 59.333 50.000 0.00 0.00 0.00 3.82
2802 2858 1.127951 GTGTGTAGGCGTATTGTGTGC 59.872 52.381 0.00 0.00 0.00 4.57
2803 2859 0.368907 GTGTAGGCGTATTGTGTGCG 59.631 55.000 0.00 0.00 39.08 5.34
2804 2860 0.738063 TGTAGGCGTATTGTGTGCGG 60.738 55.000 0.00 0.00 36.37 5.69
2807 2863 3.427425 GCGTATTGTGTGCGGCCA 61.427 61.111 2.24 0.00 36.37 5.36
2808 2864 2.760159 GCGTATTGTGTGCGGCCAT 61.760 57.895 2.24 0.00 36.37 4.40
2809 2865 1.062365 CGTATTGTGTGCGGCCATG 59.938 57.895 2.24 0.00 31.85 3.66
2810 2866 1.365368 CGTATTGTGTGCGGCCATGA 61.365 55.000 2.24 0.00 31.85 3.07
2811 2867 0.098728 GTATTGTGTGCGGCCATGAC 59.901 55.000 2.24 0.00 0.00 3.06
2812 2868 0.035534 TATTGTGTGCGGCCATGACT 60.036 50.000 2.24 0.00 0.00 3.41
2813 2869 0.895100 ATTGTGTGCGGCCATGACTT 60.895 50.000 2.24 0.00 0.00 3.01
2814 2870 0.250510 TTGTGTGCGGCCATGACTTA 60.251 50.000 2.24 0.00 0.00 2.24
2815 2871 0.035534 TGTGTGCGGCCATGACTTAT 60.036 50.000 2.24 0.00 0.00 1.73
2816 2872 0.657840 GTGTGCGGCCATGACTTATC 59.342 55.000 2.24 0.00 0.00 1.75
2817 2873 0.809636 TGTGCGGCCATGACTTATCG 60.810 55.000 2.24 0.00 0.00 2.92
2818 2874 0.810031 GTGCGGCCATGACTTATCGT 60.810 55.000 2.24 0.00 0.00 3.73
2819 2875 0.107897 TGCGGCCATGACTTATCGTT 60.108 50.000 2.24 0.00 0.00 3.85
2820 2876 1.014352 GCGGCCATGACTTATCGTTT 58.986 50.000 2.24 0.00 0.00 3.60
2821 2877 1.268032 GCGGCCATGACTTATCGTTTG 60.268 52.381 2.24 0.00 0.00 2.93
2822 2878 2.276201 CGGCCATGACTTATCGTTTGA 58.724 47.619 2.24 0.00 0.00 2.69
2823 2879 2.675844 CGGCCATGACTTATCGTTTGAA 59.324 45.455 2.24 0.00 0.00 2.69
2824 2880 3.126171 CGGCCATGACTTATCGTTTGAAA 59.874 43.478 2.24 0.00 0.00 2.69
2825 2881 4.412207 GGCCATGACTTATCGTTTGAAAC 58.588 43.478 0.00 0.00 0.00 2.78
2826 2882 4.083003 GGCCATGACTTATCGTTTGAAACA 60.083 41.667 8.93 0.00 0.00 2.83
2827 2883 5.088739 GCCATGACTTATCGTTTGAAACAG 58.911 41.667 8.93 0.44 0.00 3.16
2828 2884 5.088739 CCATGACTTATCGTTTGAAACAGC 58.911 41.667 8.93 0.00 0.00 4.40
2829 2885 5.334802 CCATGACTTATCGTTTGAAACAGCA 60.335 40.000 8.93 1.86 0.00 4.41
2830 2886 5.090652 TGACTTATCGTTTGAAACAGCAC 57.909 39.130 8.93 0.00 0.00 4.40
2831 2887 4.572795 TGACTTATCGTTTGAAACAGCACA 59.427 37.500 8.93 0.47 0.00 4.57
2832 2888 5.095691 ACTTATCGTTTGAAACAGCACAG 57.904 39.130 8.93 0.08 0.00 3.66
2833 2889 4.024048 ACTTATCGTTTGAAACAGCACAGG 60.024 41.667 8.93 0.00 0.00 4.00
2834 2890 0.380378 TCGTTTGAAACAGCACAGGC 59.620 50.000 8.93 0.00 41.61 4.85
2844 2900 4.606071 GCACAGGCGACAGAATCT 57.394 55.556 0.00 0.00 0.00 2.40
2845 2901 2.846371 GCACAGGCGACAGAATCTT 58.154 52.632 0.00 0.00 0.00 2.40
2846 2902 0.445436 GCACAGGCGACAGAATCTTG 59.555 55.000 0.00 0.00 0.00 3.02
2847 2903 0.445436 CACAGGCGACAGAATCTTGC 59.555 55.000 0.00 0.00 0.00 4.01
2848 2904 0.674895 ACAGGCGACAGAATCTTGCC 60.675 55.000 9.24 9.24 46.07 4.52
2849 2905 1.078143 AGGCGACAGAATCTTGCCC 60.078 57.895 12.61 0.00 46.92 5.36
2850 2906 1.078143 GGCGACAGAATCTTGCCCT 60.078 57.895 6.66 0.00 39.83 5.19
2851 2907 1.372087 GGCGACAGAATCTTGCCCTG 61.372 60.000 6.66 0.00 39.83 4.45
2852 2908 1.372087 GCGACAGAATCTTGCCCTGG 61.372 60.000 0.00 0.00 32.52 4.45
2853 2909 0.036010 CGACAGAATCTTGCCCTGGT 60.036 55.000 0.00 0.00 32.52 4.00
2854 2910 1.743996 GACAGAATCTTGCCCTGGTC 58.256 55.000 0.00 0.00 32.52 4.02
2855 2911 1.003580 GACAGAATCTTGCCCTGGTCA 59.996 52.381 0.00 0.00 32.52 4.02
2856 2912 1.271597 ACAGAATCTTGCCCTGGTCAC 60.272 52.381 0.00 0.00 32.52 3.67
2857 2913 0.329596 AGAATCTTGCCCTGGTCACC 59.670 55.000 0.00 0.00 0.00 4.02
2858 2914 0.681243 GAATCTTGCCCTGGTCACCC 60.681 60.000 0.00 0.00 0.00 4.61
2859 2915 2.155197 AATCTTGCCCTGGTCACCCC 62.155 60.000 0.00 0.00 0.00 4.95
2860 2916 4.366684 CTTGCCCTGGTCACCCCC 62.367 72.222 0.00 0.00 0.00 5.40
2866 2922 3.966543 CTGGTCACCCCCACCCAC 61.967 72.222 0.00 0.00 32.24 4.61
2869 2925 4.324991 GTCACCCCCACCCACGAC 62.325 72.222 0.00 0.00 0.00 4.34
2873 2929 2.760799 CCCCCACCCACGACGATA 60.761 66.667 0.00 0.00 0.00 2.92
2874 2930 2.497770 CCCCACCCACGACGATAC 59.502 66.667 0.00 0.00 0.00 2.24
2875 2931 2.056223 CCCCACCCACGACGATACT 61.056 63.158 0.00 0.00 0.00 2.12
2876 2932 1.141019 CCCACCCACGACGATACTG 59.859 63.158 0.00 0.00 0.00 2.74
2877 2933 1.317431 CCCACCCACGACGATACTGA 61.317 60.000 0.00 0.00 0.00 3.41
2878 2934 0.179145 CCACCCACGACGATACTGAC 60.179 60.000 0.00 0.00 0.00 3.51
2879 2935 0.522705 CACCCACGACGATACTGACG 60.523 60.000 0.00 0.00 0.00 4.35
2880 2936 0.674581 ACCCACGACGATACTGACGA 60.675 55.000 0.00 0.00 34.70 4.20
2881 2937 0.247974 CCCACGACGATACTGACGAC 60.248 60.000 0.00 0.00 34.70 4.34
2883 2939 0.367887 CACGACGATACTGACGACGA 59.632 55.000 16.55 0.00 46.85 4.20
2884 2940 1.070821 ACGACGATACTGACGACGAA 58.929 50.000 16.55 0.00 46.85 3.85
2885 2941 1.460743 ACGACGATACTGACGACGAAA 59.539 47.619 16.55 0.00 46.85 3.46
2886 2942 1.830633 CGACGATACTGACGACGAAAC 59.169 52.381 0.00 0.00 46.85 2.78
2887 2943 2.172365 GACGATACTGACGACGAAACC 58.828 52.381 0.00 0.00 34.70 3.27
2888 2944 1.536766 ACGATACTGACGACGAAACCA 59.463 47.619 0.00 0.00 34.70 3.67
2889 2945 2.174764 CGATACTGACGACGAAACCAG 58.825 52.381 0.00 5.87 0.00 4.00
2890 2946 2.159612 CGATACTGACGACGAAACCAGA 60.160 50.000 0.00 0.00 0.00 3.86
2891 2947 2.983402 TACTGACGACGAAACCAGAG 57.017 50.000 0.00 0.00 0.00 3.35
2892 2948 0.314302 ACTGACGACGAAACCAGAGG 59.686 55.000 0.00 0.00 0.00 3.69
2893 2949 1.006571 TGACGACGAAACCAGAGGC 60.007 57.895 0.00 0.00 0.00 4.70
2894 2950 1.006571 GACGACGAAACCAGAGGCA 60.007 57.895 0.00 0.00 0.00 4.75
2895 2951 1.282930 GACGACGAAACCAGAGGCAC 61.283 60.000 0.00 0.00 0.00 5.01
2896 2952 2.372690 CGACGAAACCAGAGGCACG 61.373 63.158 0.00 0.00 0.00 5.34
2897 2953 2.665185 ACGAAACCAGAGGCACGC 60.665 61.111 0.00 0.00 0.00 5.34
2898 2954 2.664851 CGAAACCAGAGGCACGCA 60.665 61.111 0.00 0.00 0.00 5.24
2899 2955 2.671177 CGAAACCAGAGGCACGCAG 61.671 63.158 0.00 0.00 0.00 5.18
2900 2956 2.970974 GAAACCAGAGGCACGCAGC 61.971 63.158 0.00 0.00 44.65 5.25
2923 2979 3.493303 GGCTCCTCCACCCCCATC 61.493 72.222 0.00 0.00 34.01 3.51
2924 2980 3.493303 GCTCCTCCACCCCCATCC 61.493 72.222 0.00 0.00 0.00 3.51
2925 2981 2.774351 CTCCTCCACCCCCATCCC 60.774 72.222 0.00 0.00 0.00 3.85
2926 2982 4.448340 TCCTCCACCCCCATCCCC 62.448 72.222 0.00 0.00 0.00 4.81
2927 2983 4.777546 CCTCCACCCCCATCCCCA 62.778 72.222 0.00 0.00 0.00 4.96
2928 2984 2.370123 CTCCACCCCCATCCCCAT 60.370 66.667 0.00 0.00 0.00 4.00
2929 2985 2.369568 TCCACCCCCATCCCCATC 60.370 66.667 0.00 0.00 0.00 3.51
2930 2986 2.370123 CCACCCCCATCCCCATCT 60.370 66.667 0.00 0.00 0.00 2.90
2931 2987 2.771321 CCACCCCCATCCCCATCTG 61.771 68.421 0.00 0.00 0.00 2.90
2932 2988 2.370123 ACCCCCATCCCCATCTGG 60.370 66.667 0.00 0.00 0.00 3.86
2933 2989 3.907130 CCCCCATCCCCATCTGGC 61.907 72.222 0.00 0.00 0.00 4.85
2934 2990 4.275508 CCCCATCCCCATCTGGCG 62.276 72.222 0.00 0.00 0.00 5.69
2935 2991 3.170672 CCCATCCCCATCTGGCGA 61.171 66.667 0.00 0.00 0.00 5.54
2936 2992 2.756042 CCCATCCCCATCTGGCGAA 61.756 63.158 0.00 0.00 0.00 4.70
2937 2993 1.526917 CCATCCCCATCTGGCGAAC 60.527 63.158 0.00 0.00 0.00 3.95
2938 2994 1.889105 CATCCCCATCTGGCGAACG 60.889 63.158 0.00 0.00 0.00 3.95
2939 2995 3.106986 ATCCCCATCTGGCGAACGG 62.107 63.158 0.00 0.00 0.00 4.44
2940 2996 4.096003 CCCCATCTGGCGAACGGT 62.096 66.667 0.00 0.00 0.00 4.83
2941 2997 2.819595 CCCATCTGGCGAACGGTG 60.820 66.667 0.00 0.00 0.00 4.94
2942 2998 2.819595 CCATCTGGCGAACGGTGG 60.820 66.667 0.00 0.00 0.00 4.61
2943 2999 3.499737 CATCTGGCGAACGGTGGC 61.500 66.667 0.00 0.00 0.00 5.01
2956 3012 4.666532 GTGGCGCGTGTGTTGCTC 62.667 66.667 8.43 0.00 0.00 4.26
2963 3019 3.414700 GTGTGTTGCTCCGGCGAG 61.415 66.667 9.30 5.11 42.25 5.03
2964 3020 3.611674 TGTGTTGCTCCGGCGAGA 61.612 61.111 9.30 2.74 42.25 4.04
2965 3021 2.125512 GTGTTGCTCCGGCGAGAT 60.126 61.111 9.30 0.00 42.25 2.75
2966 3022 2.125552 TGTTGCTCCGGCGAGATG 60.126 61.111 9.30 0.00 42.25 2.90
2967 3023 3.567797 GTTGCTCCGGCGAGATGC 61.568 66.667 9.30 7.46 42.25 3.91
2976 3032 3.113745 GCGAGATGCCCACCAATG 58.886 61.111 0.00 0.00 37.76 2.82
2977 3033 2.484062 GCGAGATGCCCACCAATGG 61.484 63.158 0.00 0.00 46.81 3.16
2983 3039 2.283821 GCCCACCAATGGCCTCAA 60.284 61.111 3.32 0.00 45.76 3.02
2984 3040 2.353610 GCCCACCAATGGCCTCAAG 61.354 63.158 3.32 0.00 45.76 3.02
2985 3041 2.353610 CCCACCAATGGCCTCAAGC 61.354 63.158 3.32 0.00 45.76 4.01
2986 3042 1.304713 CCACCAATGGCCTCAAGCT 60.305 57.895 3.32 0.00 39.82 3.74
2987 3043 1.318158 CCACCAATGGCCTCAAGCTC 61.318 60.000 3.32 0.00 39.82 4.09
2988 3044 0.609957 CACCAATGGCCTCAAGCTCA 60.610 55.000 3.32 0.00 43.05 4.26
2989 3045 0.112995 ACCAATGGCCTCAAGCTCAA 59.887 50.000 3.32 0.00 43.05 3.02
2990 3046 0.529378 CCAATGGCCTCAAGCTCAAC 59.471 55.000 3.32 0.00 43.05 3.18
2991 3047 0.169672 CAATGGCCTCAAGCTCAACG 59.830 55.000 3.32 0.00 43.05 4.10
2992 3048 0.962356 AATGGCCTCAAGCTCAACGG 60.962 55.000 3.32 0.00 43.05 4.44
2993 3049 2.747855 GGCCTCAAGCTCAACGGG 60.748 66.667 0.00 0.00 43.05 5.28
2994 3050 2.032681 GCCTCAAGCTCAACGGGT 59.967 61.111 0.00 0.00 38.99 5.28
2995 3051 1.295423 GCCTCAAGCTCAACGGGTA 59.705 57.895 0.00 0.00 38.99 3.69
2996 3052 0.107654 GCCTCAAGCTCAACGGGTAT 60.108 55.000 0.00 0.00 38.99 2.73
2997 3053 1.656652 CCTCAAGCTCAACGGGTATG 58.343 55.000 0.00 0.00 0.00 2.39
2998 3054 1.066143 CCTCAAGCTCAACGGGTATGT 60.066 52.381 0.00 0.00 0.00 2.29
2999 3055 2.615493 CCTCAAGCTCAACGGGTATGTT 60.615 50.000 0.00 0.00 0.00 2.71
3000 3056 3.074412 CTCAAGCTCAACGGGTATGTTT 58.926 45.455 0.00 0.00 0.00 2.83
3001 3057 2.811431 TCAAGCTCAACGGGTATGTTTG 59.189 45.455 0.00 0.00 0.00 2.93
3002 3058 1.165270 AGCTCAACGGGTATGTTTGC 58.835 50.000 0.00 0.00 0.00 3.68
3003 3059 1.165270 GCTCAACGGGTATGTTTGCT 58.835 50.000 0.00 0.00 0.00 3.91
3004 3060 1.130561 GCTCAACGGGTATGTTTGCTC 59.869 52.381 0.00 0.00 0.00 4.26
3005 3061 1.737793 CTCAACGGGTATGTTTGCTCC 59.262 52.381 0.00 0.00 0.00 4.70
3006 3062 0.808755 CAACGGGTATGTTTGCTCCC 59.191 55.000 0.00 0.00 36.82 4.30
3007 3063 0.323087 AACGGGTATGTTTGCTCCCC 60.323 55.000 0.00 0.00 36.84 4.81
3008 3064 1.453197 CGGGTATGTTTGCTCCCCC 60.453 63.158 0.00 0.00 36.84 5.40
3009 3065 1.921869 CGGGTATGTTTGCTCCCCCT 61.922 60.000 0.00 0.00 36.84 4.79
3010 3066 0.106669 GGGTATGTTTGCTCCCCCTC 60.107 60.000 0.00 0.00 34.32 4.30
3011 3067 0.919710 GGTATGTTTGCTCCCCCTCT 59.080 55.000 0.00 0.00 0.00 3.69
3012 3068 1.408822 GGTATGTTTGCTCCCCCTCTG 60.409 57.143 0.00 0.00 0.00 3.35
3013 3069 0.918983 TATGTTTGCTCCCCCTCTGG 59.081 55.000 0.00 0.00 0.00 3.86
3014 3070 2.361737 GTTTGCTCCCCCTCTGGC 60.362 66.667 0.00 0.00 0.00 4.85
3015 3071 3.661648 TTTGCTCCCCCTCTGGCC 61.662 66.667 0.00 0.00 0.00 5.36
3018 3074 4.432741 GCTCCCCCTCTGGCCAAC 62.433 72.222 7.01 0.00 0.00 3.77
3019 3075 3.732849 CTCCCCCTCTGGCCAACC 61.733 72.222 7.01 0.00 0.00 3.77
3022 3078 3.732849 CCCCTCTGGCCAACCCTC 61.733 72.222 7.01 0.00 33.59 4.30
3023 3079 2.935481 CCCTCTGGCCAACCCTCA 60.935 66.667 7.01 0.00 33.59 3.86
3024 3080 2.352805 CCTCTGGCCAACCCTCAC 59.647 66.667 7.01 0.00 33.59 3.51
3025 3081 2.227036 CCTCTGGCCAACCCTCACT 61.227 63.158 7.01 0.00 33.59 3.41
3026 3082 1.763770 CTCTGGCCAACCCTCACTT 59.236 57.895 7.01 0.00 33.59 3.16
3027 3083 0.607489 CTCTGGCCAACCCTCACTTG 60.607 60.000 7.01 0.00 33.59 3.16
3028 3084 1.059584 TCTGGCCAACCCTCACTTGA 61.060 55.000 7.01 0.00 33.59 3.02
3029 3085 0.178992 CTGGCCAACCCTCACTTGAA 60.179 55.000 7.01 0.00 33.59 2.69
3030 3086 0.467290 TGGCCAACCCTCACTTGAAC 60.467 55.000 0.61 0.00 33.59 3.18
3031 3087 0.178990 GGCCAACCCTCACTTGAACT 60.179 55.000 0.00 0.00 0.00 3.01
3032 3088 1.073284 GGCCAACCCTCACTTGAACTA 59.927 52.381 0.00 0.00 0.00 2.24
3033 3089 2.427506 GCCAACCCTCACTTGAACTAG 58.572 52.381 0.00 0.00 0.00 2.57
3034 3090 2.224548 GCCAACCCTCACTTGAACTAGT 60.225 50.000 0.00 0.00 0.00 2.57
3035 3091 3.747708 GCCAACCCTCACTTGAACTAGTT 60.748 47.826 8.13 8.13 0.00 2.24
3036 3092 3.815401 CCAACCCTCACTTGAACTAGTTG 59.185 47.826 14.14 0.94 34.55 3.16
3037 3093 4.451900 CAACCCTCACTTGAACTAGTTGT 58.548 43.478 14.14 1.66 31.13 3.32
3038 3094 4.338379 ACCCTCACTTGAACTAGTTGTC 57.662 45.455 14.14 0.00 0.00 3.18
3039 3095 3.967987 ACCCTCACTTGAACTAGTTGTCT 59.032 43.478 14.14 0.00 0.00 3.41
3040 3096 4.202264 ACCCTCACTTGAACTAGTTGTCTG 60.202 45.833 14.14 3.07 0.00 3.51
3041 3097 4.202264 CCCTCACTTGAACTAGTTGTCTGT 60.202 45.833 14.14 3.75 0.00 3.41
3042 3098 5.360591 CCTCACTTGAACTAGTTGTCTGTT 58.639 41.667 14.14 0.00 0.00 3.16
3043 3099 5.463724 CCTCACTTGAACTAGTTGTCTGTTC 59.536 44.000 14.14 0.00 40.09 3.18
3044 3100 5.972935 TCACTTGAACTAGTTGTCTGTTCA 58.027 37.500 14.14 0.00 45.31 3.18
3045 3101 5.810587 TCACTTGAACTAGTTGTCTGTTCAC 59.189 40.000 14.14 0.00 46.21 3.18
3046 3102 5.006746 CACTTGAACTAGTTGTCTGTTCACC 59.993 44.000 14.14 0.00 46.21 4.02
3047 3103 3.713288 TGAACTAGTTGTCTGTTCACCG 58.287 45.455 14.14 0.00 43.15 4.94
3048 3104 2.150397 ACTAGTTGTCTGTTCACCGC 57.850 50.000 0.00 0.00 0.00 5.68
3049 3105 1.270147 ACTAGTTGTCTGTTCACCGCC 60.270 52.381 0.00 0.00 0.00 6.13
3050 3106 0.319211 TAGTTGTCTGTTCACCGCCG 60.319 55.000 0.00 0.00 0.00 6.46
3051 3107 2.970324 TTGTCTGTTCACCGCCGC 60.970 61.111 0.00 0.00 0.00 6.53
3064 3120 2.833121 GCCGCGGATTTTGGGGAT 60.833 61.111 33.48 0.00 41.69 3.85
3065 3121 2.423064 GCCGCGGATTTTGGGGATT 61.423 57.895 33.48 0.00 41.69 3.01
3066 3122 1.955495 GCCGCGGATTTTGGGGATTT 61.955 55.000 33.48 0.00 41.69 2.17
3067 3123 0.102300 CCGCGGATTTTGGGGATTTC 59.898 55.000 24.07 0.00 41.69 2.17
3068 3124 1.102978 CGCGGATTTTGGGGATTTCT 58.897 50.000 0.00 0.00 0.00 2.52
3069 3125 1.476488 CGCGGATTTTGGGGATTTCTT 59.524 47.619 0.00 0.00 0.00 2.52
3070 3126 2.685897 CGCGGATTTTGGGGATTTCTTA 59.314 45.455 0.00 0.00 0.00 2.10
3071 3127 3.488553 CGCGGATTTTGGGGATTTCTTAC 60.489 47.826 0.00 0.00 0.00 2.34
3072 3128 3.181479 GCGGATTTTGGGGATTTCTTACC 60.181 47.826 0.00 0.00 0.00 2.85
3073 3129 4.020543 CGGATTTTGGGGATTTCTTACCA 58.979 43.478 0.00 0.00 0.00 3.25
3074 3130 4.464597 CGGATTTTGGGGATTTCTTACCAA 59.535 41.667 0.00 0.00 40.94 3.67
3075 3131 5.394115 CGGATTTTGGGGATTTCTTACCAAG 60.394 44.000 0.00 0.00 43.22 3.61
3076 3132 5.483937 GGATTTTGGGGATTTCTTACCAAGT 59.516 40.000 0.00 0.00 43.22 3.16
3077 3133 6.013725 GGATTTTGGGGATTTCTTACCAAGTT 60.014 38.462 0.00 0.00 43.22 2.66
3078 3134 5.799827 TTTGGGGATTTCTTACCAAGTTG 57.200 39.130 0.00 0.00 43.22 3.16
3079 3135 3.773560 TGGGGATTTCTTACCAAGTTGG 58.226 45.455 20.76 20.76 45.02 3.77
3080 3136 2.496070 GGGGATTTCTTACCAAGTTGGC 59.504 50.000 22.25 2.59 42.67 4.52
3081 3137 3.431415 GGGATTTCTTACCAAGTTGGCT 58.569 45.455 22.25 11.50 42.67 4.75
3082 3138 3.444034 GGGATTTCTTACCAAGTTGGCTC 59.556 47.826 22.25 7.21 42.67 4.70
3083 3139 4.079253 GGATTTCTTACCAAGTTGGCTCA 58.921 43.478 22.25 4.55 42.67 4.26
3084 3140 4.156739 GGATTTCTTACCAAGTTGGCTCAG 59.843 45.833 22.25 14.47 42.67 3.35
3085 3141 2.185004 TCTTACCAAGTTGGCTCAGC 57.815 50.000 22.25 0.00 42.67 4.26
3086 3142 1.699634 TCTTACCAAGTTGGCTCAGCT 59.300 47.619 22.25 3.68 42.67 4.24
3087 3143 2.106511 TCTTACCAAGTTGGCTCAGCTT 59.893 45.455 22.25 2.91 42.67 3.74
3088 3144 2.185004 TACCAAGTTGGCTCAGCTTC 57.815 50.000 22.25 0.00 42.67 3.86
3089 3145 0.886490 ACCAAGTTGGCTCAGCTTCG 60.886 55.000 22.25 0.00 42.67 3.79
3090 3146 0.603707 CCAAGTTGGCTCAGCTTCGA 60.604 55.000 9.46 0.00 32.86 3.71
3091 3147 1.446907 CAAGTTGGCTCAGCTTCGAT 58.553 50.000 0.00 0.00 32.86 3.59
3092 3148 1.808945 CAAGTTGGCTCAGCTTCGATT 59.191 47.619 0.00 0.00 32.86 3.34
3093 3149 1.731720 AGTTGGCTCAGCTTCGATTC 58.268 50.000 0.00 0.00 0.00 2.52
3094 3150 1.002430 AGTTGGCTCAGCTTCGATTCA 59.998 47.619 0.00 0.00 0.00 2.57
3095 3151 2.012673 GTTGGCTCAGCTTCGATTCAT 58.987 47.619 0.00 0.00 0.00 2.57
3096 3152 1.660167 TGGCTCAGCTTCGATTCATG 58.340 50.000 0.00 0.00 0.00 3.07
3097 3153 0.307146 GGCTCAGCTTCGATTCATGC 59.693 55.000 0.00 0.00 0.00 4.06
3098 3154 1.012086 GCTCAGCTTCGATTCATGCA 58.988 50.000 0.00 0.00 0.00 3.96
3099 3155 1.003759 GCTCAGCTTCGATTCATGCAG 60.004 52.381 0.00 0.00 0.00 4.41
3100 3156 1.598132 CTCAGCTTCGATTCATGCAGG 59.402 52.381 0.00 0.00 0.00 4.85
3101 3157 1.207811 TCAGCTTCGATTCATGCAGGA 59.792 47.619 0.00 0.00 0.00 3.86
3102 3158 2.158856 TCAGCTTCGATTCATGCAGGAT 60.159 45.455 0.03 0.00 0.00 3.24
3103 3159 2.031944 CAGCTTCGATTCATGCAGGATG 60.032 50.000 0.03 0.00 40.87 3.51
3104 3160 1.945394 GCTTCGATTCATGCAGGATGT 59.055 47.619 0.03 0.00 39.31 3.06
3105 3161 2.286831 GCTTCGATTCATGCAGGATGTG 60.287 50.000 0.03 0.00 39.31 3.21
3106 3162 2.696989 TCGATTCATGCAGGATGTGT 57.303 45.000 0.03 0.00 39.31 3.72
3107 3163 2.282407 TCGATTCATGCAGGATGTGTG 58.718 47.619 0.03 0.00 39.31 3.82
3108 3164 1.268386 CGATTCATGCAGGATGTGTGC 60.268 52.381 0.03 0.00 41.59 4.57
3109 3165 2.022195 GATTCATGCAGGATGTGTGCT 58.978 47.619 0.03 0.00 41.78 4.40
3110 3166 1.170442 TTCATGCAGGATGTGTGCTG 58.830 50.000 0.03 0.00 45.64 4.41
3114 3170 3.807538 CAGGATGTGTGCTGCGCC 61.808 66.667 11.12 2.83 36.98 6.53
3133 3189 3.056328 GGCCCGTGGAGCAGTTTC 61.056 66.667 0.00 0.00 0.00 2.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
106 122 3.589288 GAGGTGGGGGCATATTCTCTAAT 59.411 47.826 0.00 0.00 0.00 1.73
123 139 1.077501 ATGTGCATTCGGGGAGGTG 60.078 57.895 0.00 0.00 0.00 4.00
131 147 1.705337 GGACGTGGGATGTGCATTCG 61.705 60.000 0.00 0.00 0.00 3.34
145 161 1.686110 GGGGTGGAGAGATGGACGT 60.686 63.158 0.00 0.00 0.00 4.34
147 163 0.543749 CAAGGGGTGGAGAGATGGAC 59.456 60.000 0.00 0.00 0.00 4.02
148 164 1.274703 GCAAGGGGTGGAGAGATGGA 61.275 60.000 0.00 0.00 0.00 3.41
173 189 3.391296 AGTTATACCCACGAAGGCATGAT 59.609 43.478 0.00 0.00 35.39 2.45
205 221 6.456047 CGGACAAACATGACTATTGATGTCAG 60.456 42.308 0.00 0.00 45.88 3.51
211 227 3.937814 AGCGGACAAACATGACTATTGA 58.062 40.909 0.00 0.00 0.00 2.57
212 228 5.523552 TCATAGCGGACAAACATGACTATTG 59.476 40.000 0.00 1.83 0.00 1.90
221 239 4.465632 AGTGTATCATAGCGGACAAACA 57.534 40.909 0.00 0.00 0.00 2.83
350 369 3.641436 ACCAGTCTCACAGTGAACACATA 59.359 43.478 4.41 0.00 0.00 2.29
360 379 1.069823 AGTGCAAGACCAGTCTCACAG 59.930 52.381 17.16 4.55 39.39 3.66
368 387 2.859165 TTTCCCTAGTGCAAGACCAG 57.141 50.000 0.00 0.00 0.00 4.00
403 422 0.665835 TCGCTGGTCGCAAACATTTT 59.334 45.000 0.00 0.00 39.08 1.82
405 424 0.602638 TCTCGCTGGTCGCAAACATT 60.603 50.000 0.00 0.00 39.08 2.71
433 452 4.322049 CCACCAACTTACTAGTCACCTCTG 60.322 50.000 0.00 0.00 31.99 3.35
436 455 3.853207 TCCACCAACTTACTAGTCACCT 58.147 45.455 0.00 0.00 31.99 4.00
458 477 4.568072 AGTGGTTAGCATGTGATTGGTA 57.432 40.909 0.00 0.00 0.00 3.25
460 479 4.261322 GCATAGTGGTTAGCATGTGATTGG 60.261 45.833 0.00 0.00 0.00 3.16
466 485 4.588899 TCTTTGCATAGTGGTTAGCATGT 58.411 39.130 4.00 0.00 36.80 3.21
499 518 6.347969 CGATCAATAGATGTGGCAATTGTAGG 60.348 42.308 7.40 0.00 33.72 3.18
505 524 5.802465 AGATCGATCAATAGATGTGGCAAT 58.198 37.500 26.47 0.00 33.72 3.56
583 618 3.131396 GGTTCGTCAATCACAGTTCTGT 58.869 45.455 0.00 0.00 0.00 3.41
585 620 2.550208 GGGGTTCGTCAATCACAGTTCT 60.550 50.000 0.00 0.00 0.00 3.01
589 624 1.806542 CTTGGGGTTCGTCAATCACAG 59.193 52.381 0.00 0.00 23.75 3.66
634 672 9.328845 ACTTTGACTTTGCAAATTATTGTGATT 57.671 25.926 13.23 0.00 38.85 2.57
692 730 0.889186 ACACAGCCATCCACGAAACC 60.889 55.000 0.00 0.00 0.00 3.27
710 748 5.948992 ATTCAAAGTCAACCTAGAGCAAC 57.051 39.130 0.00 0.00 0.00 4.17
789 833 0.603707 CAAGCTTGCCCTTCAGACGA 60.604 55.000 14.65 0.00 0.00 4.20
817 861 4.947388 TGCATTAATGTACCTCCCAAGTTC 59.053 41.667 16.61 0.00 0.00 3.01
872 916 3.000819 TGGGGGTCGTCGCAGAAT 61.001 61.111 0.00 0.00 39.69 2.40
905 949 2.751806 CTGGATTTGCTGGGTTTCTCTC 59.248 50.000 0.00 0.00 0.00 3.20
906 950 2.108952 ACTGGATTTGCTGGGTTTCTCT 59.891 45.455 0.00 0.00 0.00 3.10
918 962 0.178068 ATCGACGGGGACTGGATTTG 59.822 55.000 0.00 0.00 40.47 2.32
1100 1144 4.060038 GCGGTTCGAGGAACGGGA 62.060 66.667 14.99 0.00 42.78 5.14
1218 1262 2.977178 CAGAGGCGCTGGAAGAGT 59.023 61.111 10.69 0.00 41.07 3.24
1332 1376 1.729472 CGGCGCATATCCTCGTAGAAG 60.729 57.143 10.83 0.00 34.09 2.85
1455 1499 2.660064 GGAGCGGAAGGAGAAGGCA 61.660 63.158 0.00 0.00 0.00 4.75
1756 1806 4.239991 AGGGACTGACACAGGCAT 57.760 55.556 6.93 0.00 42.18 4.40
1863 1913 1.005037 TGACTGCGGTGACATGACC 60.005 57.895 0.80 0.00 0.00 4.02
1875 1925 2.999355 GACATCAAGAACTCCTGACTGC 59.001 50.000 0.00 0.00 0.00 4.40
1888 1938 7.232994 GTCAGAAAATTCTTCTCGACATCAAG 58.767 38.462 16.50 0.00 34.74 3.02
1995 2045 2.037687 CCTTCCATGGGCAAGCCA 59.962 61.111 13.02 0.00 37.98 4.75
2004 2054 2.511218 TCTCCATTTCTCCCCTTCCATG 59.489 50.000 0.00 0.00 0.00 3.66
2217 2268 6.552859 TTATGCACGAGAAAATGTTGAGAA 57.447 33.333 0.00 0.00 0.00 2.87
2222 2273 6.970484 AGTCTTTTATGCACGAGAAAATGTT 58.030 32.000 0.00 0.00 0.00 2.71
2244 2295 4.352893 AGTCCCAACCCTGTTAACAATAGT 59.647 41.667 10.03 4.51 0.00 2.12
2245 2296 4.918588 AGTCCCAACCCTGTTAACAATAG 58.081 43.478 10.03 3.87 0.00 1.73
2246 2297 5.074115 CAAGTCCCAACCCTGTTAACAATA 58.926 41.667 10.03 0.00 0.00 1.90
2253 2304 0.930726 TTCCAAGTCCCAACCCTGTT 59.069 50.000 0.00 0.00 0.00 3.16
2256 2307 1.231963 AGTTTCCAAGTCCCAACCCT 58.768 50.000 0.00 0.00 0.00 4.34
2315 2366 6.681178 CCTACATTGTAAAGAAATACGTTGCG 59.319 38.462 0.00 0.00 0.00 4.85
2318 2369 8.611654 ACACCTACATTGTAAAGAAATACGTT 57.388 30.769 0.00 0.00 0.00 3.99
2321 2372 9.821662 GACAACACCTACATTGTAAAGAAATAC 57.178 33.333 0.00 0.00 39.13 1.89
2332 2383 4.008074 ACAGAGGACAACACCTACATTG 57.992 45.455 0.00 0.00 40.73 2.82
2364 2415 2.464459 CCGGTCCGCTCAAAGCATC 61.464 63.158 5.50 0.00 42.58 3.91
2384 2435 1.963985 AGCTTTCCATCAGGAGACCT 58.036 50.000 0.00 0.00 46.74 3.85
2483 2537 7.126733 ACCAGTACTGAACATATCTAACCTCT 58.873 38.462 24.68 0.00 0.00 3.69
2487 2541 8.033038 TGACAACCAGTACTGAACATATCTAAC 58.967 37.037 24.68 4.38 0.00 2.34
2507 2561 7.552687 TCCATGACCTTTGACTATATTGACAAC 59.447 37.037 0.00 0.00 0.00 3.32
2514 2568 9.745018 CCATAATTCCATGACCTTTGACTATAT 57.255 33.333 0.00 0.00 0.00 0.86
2515 2569 7.665559 GCCATAATTCCATGACCTTTGACTATA 59.334 37.037 0.00 0.00 0.00 1.31
2517 2571 5.827797 GCCATAATTCCATGACCTTTGACTA 59.172 40.000 0.00 0.00 0.00 2.59
2518 2572 4.646492 GCCATAATTCCATGACCTTTGACT 59.354 41.667 0.00 0.00 0.00 3.41
2519 2573 4.402155 TGCCATAATTCCATGACCTTTGAC 59.598 41.667 0.00 0.00 0.00 3.18
2520 2574 4.608269 TGCCATAATTCCATGACCTTTGA 58.392 39.130 0.00 0.00 0.00 2.69
2522 2576 5.776716 CCTATGCCATAATTCCATGACCTTT 59.223 40.000 0.00 0.00 0.00 3.11
2541 2595 6.094048 CACAGATTAACCACTGGTTTCCTATG 59.906 42.308 18.75 12.67 44.33 2.23
2546 2600 4.394729 TCCACAGATTAACCACTGGTTTC 58.605 43.478 18.75 11.14 44.33 2.78
2570 2624 2.749044 AACCATGCTGCTCGGCTG 60.749 61.111 0.00 0.00 0.00 4.85
2571 2625 2.749044 CAACCATGCTGCTCGGCT 60.749 61.111 0.00 0.00 0.00 5.52
2572 2626 2.146073 AAACAACCATGCTGCTCGGC 62.146 55.000 0.00 0.00 0.00 5.54
2573 2627 1.164411 TAAACAACCATGCTGCTCGG 58.836 50.000 0.00 3.66 0.00 4.63
2574 2628 2.226437 AGTTAAACAACCATGCTGCTCG 59.774 45.455 0.00 0.00 0.00 5.03
2587 2641 6.612247 ATCACGATCAACACAAGTTAAACA 57.388 33.333 0.00 0.00 35.85 2.83
2602 2656 3.185246 ACAGGGTCATGAATCACGATC 57.815 47.619 0.00 0.00 0.00 3.69
2603 2657 3.634397 AACAGGGTCATGAATCACGAT 57.366 42.857 0.00 0.00 0.00 3.73
2604 2658 3.417069 AAACAGGGTCATGAATCACGA 57.583 42.857 0.00 0.00 0.00 4.35
2605 2659 5.818136 AATAAACAGGGTCATGAATCACG 57.182 39.130 0.00 0.00 0.00 4.35
2606 2660 7.035612 GGAAAATAAACAGGGTCATGAATCAC 58.964 38.462 0.00 0.00 0.00 3.06
2607 2661 6.723515 TGGAAAATAAACAGGGTCATGAATCA 59.276 34.615 0.00 0.00 0.00 2.57
2608 2662 7.169158 TGGAAAATAAACAGGGTCATGAATC 57.831 36.000 0.00 0.00 0.00 2.52
2609 2663 7.399765 TCATGGAAAATAAACAGGGTCATGAAT 59.600 33.333 0.00 0.00 36.55 2.57
2632 2688 5.105752 GCACTCGTAATTCTCAGTCTTCAT 58.894 41.667 0.00 0.00 0.00 2.57
2638 2694 1.816835 TCGGCACTCGTAATTCTCAGT 59.183 47.619 0.00 0.00 40.32 3.41
2643 2699 4.328983 TCTGAAAATCGGCACTCGTAATTC 59.671 41.667 0.00 0.00 40.32 2.17
2650 2706 0.729690 GCCTCTGAAAATCGGCACTC 59.270 55.000 0.44 0.00 42.06 3.51
2651 2707 0.678048 GGCCTCTGAAAATCGGCACT 60.678 55.000 0.00 0.00 44.23 4.40
2652 2708 1.803289 GGCCTCTGAAAATCGGCAC 59.197 57.895 0.00 0.00 44.23 5.01
2653 2709 1.745115 CGGCCTCTGAAAATCGGCA 60.745 57.895 0.00 0.00 44.23 5.69
2654 2710 1.432270 CTCGGCCTCTGAAAATCGGC 61.432 60.000 0.00 0.00 41.75 5.54
2655 2711 1.432270 GCTCGGCCTCTGAAAATCGG 61.432 60.000 0.00 0.00 0.00 4.18
2656 2712 1.432270 GGCTCGGCCTCTGAAAATCG 61.432 60.000 0.00 0.00 46.69 3.34
2657 2713 2.398803 GGCTCGGCCTCTGAAAATC 58.601 57.895 0.00 0.00 46.69 2.17
2658 2714 4.645809 GGCTCGGCCTCTGAAAAT 57.354 55.556 0.00 0.00 46.69 1.82
2668 2724 4.840005 GCCTACCTGTGGCTCGGC 62.840 72.222 0.00 0.00 46.38 5.54
2674 2730 1.046472 TGATACCGGCCTACCTGTGG 61.046 60.000 0.00 0.00 34.80 4.17
2675 2731 1.048601 ATGATACCGGCCTACCTGTG 58.951 55.000 0.00 0.00 34.80 3.66
2676 2732 1.048601 CATGATACCGGCCTACCTGT 58.951 55.000 0.00 0.00 37.19 4.00
2677 2733 0.321671 CCATGATACCGGCCTACCTG 59.678 60.000 0.00 0.00 0.00 4.00
2678 2734 0.836400 CCCATGATACCGGCCTACCT 60.836 60.000 0.00 0.00 0.00 3.08
2679 2735 1.677552 CCCATGATACCGGCCTACC 59.322 63.158 0.00 0.00 0.00 3.18
2680 2736 1.003718 GCCCATGATACCGGCCTAC 60.004 63.158 0.00 0.00 36.63 3.18
2681 2737 2.579657 CGCCCATGATACCGGCCTA 61.580 63.158 0.00 0.00 39.66 3.93
2682 2738 3.941188 CGCCCATGATACCGGCCT 61.941 66.667 0.00 0.00 39.66 5.19
2683 2739 4.250305 ACGCCCATGATACCGGCC 62.250 66.667 0.00 0.00 39.66 6.13
2684 2740 2.665185 GACGCCCATGATACCGGC 60.665 66.667 0.00 0.00 39.41 6.13
2685 2741 2.030562 GGACGCCCATGATACCGG 59.969 66.667 0.00 0.00 0.00 5.28
2686 2742 2.355837 CGGACGCCCATGATACCG 60.356 66.667 0.00 0.00 34.77 4.02
2687 2743 0.463116 AAACGGACGCCCATGATACC 60.463 55.000 0.00 0.00 0.00 2.73
2688 2744 0.655733 CAAACGGACGCCCATGATAC 59.344 55.000 0.00 0.00 0.00 2.24
2689 2745 0.462937 CCAAACGGACGCCCATGATA 60.463 55.000 0.00 0.00 0.00 2.15
2690 2746 1.748879 CCAAACGGACGCCCATGAT 60.749 57.895 0.00 0.00 0.00 2.45
2691 2747 2.359354 CCAAACGGACGCCCATGA 60.359 61.111 0.00 0.00 0.00 3.07
2692 2748 3.439540 CCCAAACGGACGCCCATG 61.440 66.667 0.00 0.00 0.00 3.66
2699 2755 2.781431 ATCCCAAGGCCCAAACGGAC 62.781 60.000 0.00 0.00 42.00 4.79
2700 2756 2.543797 ATCCCAAGGCCCAAACGGA 61.544 57.895 0.00 0.00 0.00 4.69
2701 2757 2.037208 ATCCCAAGGCCCAAACGG 59.963 61.111 0.00 0.00 0.00 4.44
2702 2758 1.606313 ACATCCCAAGGCCCAAACG 60.606 57.895 0.00 0.00 0.00 3.60
2703 2759 1.974543 CACATCCCAAGGCCCAAAC 59.025 57.895 0.00 0.00 0.00 2.93
2704 2760 1.912763 GCACATCCCAAGGCCCAAA 60.913 57.895 0.00 0.00 0.00 3.28
2705 2761 2.283821 GCACATCCCAAGGCCCAA 60.284 61.111 0.00 0.00 0.00 4.12
2706 2762 2.859525 GATGCACATCCCAAGGCCCA 62.860 60.000 0.00 0.00 31.76 5.36
2707 2763 2.042639 ATGCACATCCCAAGGCCC 60.043 61.111 0.00 0.00 0.00 5.80
2708 2764 3.530067 GATGCACATCCCAAGGCC 58.470 61.111 0.00 0.00 31.76 5.19
2716 2772 1.091771 CCACAGACGGGATGCACATC 61.092 60.000 1.86 1.86 37.11 3.06
2717 2773 1.078214 CCACAGACGGGATGCACAT 60.078 57.895 0.00 0.00 0.00 3.21
2718 2774 2.347114 CCACAGACGGGATGCACA 59.653 61.111 0.00 0.00 0.00 4.57
2726 2782 4.704833 CCTGCCACCCACAGACGG 62.705 72.222 0.00 0.00 37.32 4.79
2729 2785 3.863114 TAGGCCTGCCACCCACAGA 62.863 63.158 17.99 0.00 37.32 3.41
2730 2786 2.683465 ATAGGCCTGCCACCCACAG 61.683 63.158 17.99 0.00 38.92 3.66
2731 2787 2.613696 ATAGGCCTGCCACCCACA 60.614 61.111 17.99 0.00 38.92 4.17
2732 2788 2.124151 CATAGGCCTGCCACCCAC 60.124 66.667 17.99 0.00 38.92 4.61
2733 2789 4.127744 GCATAGGCCTGCCACCCA 62.128 66.667 17.99 0.00 38.92 4.51
2734 2790 4.127744 TGCATAGGCCTGCCACCC 62.128 66.667 17.99 0.00 41.58 4.61
2735 2791 2.517875 CTGCATAGGCCTGCCACC 60.518 66.667 17.99 0.00 41.58 4.61
2736 2792 2.117156 CACTGCATAGGCCTGCCAC 61.117 63.158 17.99 2.37 41.58 5.01
2737 2793 1.851065 TTCACTGCATAGGCCTGCCA 61.851 55.000 17.99 8.61 41.58 4.92
2738 2794 0.680921 TTTCACTGCATAGGCCTGCC 60.681 55.000 17.99 3.61 41.58 4.85
2739 2795 1.396653 ATTTCACTGCATAGGCCTGC 58.603 50.000 17.99 13.48 42.62 4.85
2740 2796 3.544684 TGTATTTCACTGCATAGGCCTG 58.455 45.455 17.99 0.25 40.13 4.85
2741 2797 3.434167 CCTGTATTTCACTGCATAGGCCT 60.434 47.826 11.78 11.78 40.13 5.19
2742 2798 2.880890 CCTGTATTTCACTGCATAGGCC 59.119 50.000 0.00 0.00 40.13 5.19
2743 2799 2.291741 GCCTGTATTTCACTGCATAGGC 59.708 50.000 0.00 0.00 42.12 3.93
2744 2800 2.880890 GGCCTGTATTTCACTGCATAGG 59.119 50.000 0.00 0.00 0.00 2.57
2745 2801 2.545526 CGGCCTGTATTTCACTGCATAG 59.454 50.000 0.00 0.00 0.00 2.23
2746 2802 2.560504 CGGCCTGTATTTCACTGCATA 58.439 47.619 0.00 0.00 0.00 3.14
2747 2803 1.382522 CGGCCTGTATTTCACTGCAT 58.617 50.000 0.00 0.00 0.00 3.96
2748 2804 1.305219 GCGGCCTGTATTTCACTGCA 61.305 55.000 0.00 0.00 0.00 4.41
2749 2805 1.429423 GCGGCCTGTATTTCACTGC 59.571 57.895 0.00 0.00 0.00 4.40
2750 2806 0.739462 TCGCGGCCTGTATTTCACTG 60.739 55.000 6.13 0.00 0.00 3.66
2751 2807 0.178068 ATCGCGGCCTGTATTTCACT 59.822 50.000 6.13 0.00 0.00 3.41
2752 2808 1.525619 GTATCGCGGCCTGTATTTCAC 59.474 52.381 6.13 0.00 0.00 3.18
2753 2809 1.860676 GTATCGCGGCCTGTATTTCA 58.139 50.000 6.13 0.00 0.00 2.69
2754 2810 0.782384 CGTATCGCGGCCTGTATTTC 59.218 55.000 6.13 0.00 36.85 2.17
2755 2811 2.895039 CGTATCGCGGCCTGTATTT 58.105 52.632 6.13 0.00 36.85 1.40
2756 2812 4.647654 CGTATCGCGGCCTGTATT 57.352 55.556 6.13 0.00 36.85 1.89
2765 2821 2.259439 ACTCCCTAGCCGTATCGCG 61.259 63.158 0.00 0.00 40.95 5.87
2766 2822 1.286260 CACTCCCTAGCCGTATCGC 59.714 63.158 0.00 0.00 0.00 4.58
2767 2823 0.311165 CACACTCCCTAGCCGTATCG 59.689 60.000 0.00 0.00 0.00 2.92
2768 2824 1.400737 ACACACTCCCTAGCCGTATC 58.599 55.000 0.00 0.00 0.00 2.24
2769 2825 2.584236 CTACACACTCCCTAGCCGTAT 58.416 52.381 0.00 0.00 0.00 3.06
2770 2826 1.409241 CCTACACACTCCCTAGCCGTA 60.409 57.143 0.00 0.00 0.00 4.02
2771 2827 0.683504 CCTACACACTCCCTAGCCGT 60.684 60.000 0.00 0.00 0.00 5.68
2772 2828 2.017559 GCCTACACACTCCCTAGCCG 62.018 65.000 0.00 0.00 0.00 5.52
2773 2829 1.823976 GCCTACACACTCCCTAGCC 59.176 63.158 0.00 0.00 0.00 3.93
2774 2830 1.321074 ACGCCTACACACTCCCTAGC 61.321 60.000 0.00 0.00 0.00 3.42
2775 2831 2.048444 TACGCCTACACACTCCCTAG 57.952 55.000 0.00 0.00 0.00 3.02
2776 2832 2.691526 CAATACGCCTACACACTCCCTA 59.308 50.000 0.00 0.00 0.00 3.53
2777 2833 1.480954 CAATACGCCTACACACTCCCT 59.519 52.381 0.00 0.00 0.00 4.20
2778 2834 1.206371 ACAATACGCCTACACACTCCC 59.794 52.381 0.00 0.00 0.00 4.30
2779 2835 2.268298 CACAATACGCCTACACACTCC 58.732 52.381 0.00 0.00 0.00 3.85
2780 2836 2.666508 CACACAATACGCCTACACACTC 59.333 50.000 0.00 0.00 0.00 3.51
2781 2837 2.683968 CACACAATACGCCTACACACT 58.316 47.619 0.00 0.00 0.00 3.55
2782 2838 1.127951 GCACACAATACGCCTACACAC 59.872 52.381 0.00 0.00 0.00 3.82
2783 2839 1.434555 GCACACAATACGCCTACACA 58.565 50.000 0.00 0.00 0.00 3.72
2784 2840 0.368907 CGCACACAATACGCCTACAC 59.631 55.000 0.00 0.00 0.00 2.90
2785 2841 0.738063 CCGCACACAATACGCCTACA 60.738 55.000 0.00 0.00 0.00 2.74
2786 2842 2.003672 CCGCACACAATACGCCTAC 58.996 57.895 0.00 0.00 0.00 3.18
2787 2843 1.812093 GCCGCACACAATACGCCTA 60.812 57.895 0.00 0.00 0.00 3.93
2788 2844 3.124921 GCCGCACACAATACGCCT 61.125 61.111 0.00 0.00 0.00 5.52
2789 2845 4.174129 GGCCGCACACAATACGCC 62.174 66.667 0.00 0.00 0.00 5.68
2790 2846 2.760159 ATGGCCGCACACAATACGC 61.760 57.895 0.00 0.00 0.00 4.42
2791 2847 1.062365 CATGGCCGCACACAATACG 59.938 57.895 0.00 0.00 0.00 3.06
2792 2848 0.098728 GTCATGGCCGCACACAATAC 59.901 55.000 0.00 0.00 0.00 1.89
2793 2849 0.035534 AGTCATGGCCGCACACAATA 60.036 50.000 0.00 0.00 0.00 1.90
2794 2850 0.895100 AAGTCATGGCCGCACACAAT 60.895 50.000 0.00 0.00 0.00 2.71
2795 2851 0.250510 TAAGTCATGGCCGCACACAA 60.251 50.000 0.00 0.00 0.00 3.33
2796 2852 0.035534 ATAAGTCATGGCCGCACACA 60.036 50.000 0.00 0.00 0.00 3.72
2797 2853 0.657840 GATAAGTCATGGCCGCACAC 59.342 55.000 0.00 0.00 0.00 3.82
2798 2854 0.809636 CGATAAGTCATGGCCGCACA 60.810 55.000 0.00 0.00 0.00 4.57
2799 2855 0.810031 ACGATAAGTCATGGCCGCAC 60.810 55.000 0.00 0.00 0.00 5.34
2800 2856 0.107897 AACGATAAGTCATGGCCGCA 60.108 50.000 0.00 0.00 0.00 5.69
2801 2857 1.014352 AAACGATAAGTCATGGCCGC 58.986 50.000 0.00 0.00 0.00 6.53
2802 2858 2.276201 TCAAACGATAAGTCATGGCCG 58.724 47.619 0.00 0.00 0.00 6.13
2803 2859 4.083003 TGTTTCAAACGATAAGTCATGGCC 60.083 41.667 0.00 0.00 0.00 5.36
2804 2860 5.041951 TGTTTCAAACGATAAGTCATGGC 57.958 39.130 0.00 0.00 0.00 4.40
2805 2861 5.088739 GCTGTTTCAAACGATAAGTCATGG 58.911 41.667 0.00 0.00 0.00 3.66
2806 2862 5.565259 GTGCTGTTTCAAACGATAAGTCATG 59.435 40.000 0.00 0.00 0.00 3.07
2807 2863 5.238432 TGTGCTGTTTCAAACGATAAGTCAT 59.762 36.000 0.00 0.00 0.00 3.06
2808 2864 4.572795 TGTGCTGTTTCAAACGATAAGTCA 59.427 37.500 0.00 0.00 0.00 3.41
2809 2865 5.090652 TGTGCTGTTTCAAACGATAAGTC 57.909 39.130 0.00 0.00 0.00 3.01
2810 2866 4.024048 CCTGTGCTGTTTCAAACGATAAGT 60.024 41.667 0.00 0.00 0.00 2.24
2811 2867 4.466828 CCTGTGCTGTTTCAAACGATAAG 58.533 43.478 0.00 0.00 0.00 1.73
2812 2868 3.304391 GCCTGTGCTGTTTCAAACGATAA 60.304 43.478 0.00 0.00 33.53 1.75
2813 2869 2.225491 GCCTGTGCTGTTTCAAACGATA 59.775 45.455 0.00 0.00 33.53 2.92
2814 2870 1.001378 GCCTGTGCTGTTTCAAACGAT 60.001 47.619 0.00 0.00 33.53 3.73
2815 2871 0.380378 GCCTGTGCTGTTTCAAACGA 59.620 50.000 0.00 0.00 33.53 3.85
2816 2872 0.929824 CGCCTGTGCTGTTTCAAACG 60.930 55.000 0.00 0.00 34.43 3.60
2817 2873 0.380378 TCGCCTGTGCTGTTTCAAAC 59.620 50.000 0.00 0.00 34.43 2.93
2818 2874 0.380378 GTCGCCTGTGCTGTTTCAAA 59.620 50.000 0.00 0.00 34.43 2.69
2819 2875 0.746204 TGTCGCCTGTGCTGTTTCAA 60.746 50.000 0.00 0.00 34.43 2.69
2820 2876 1.153269 TGTCGCCTGTGCTGTTTCA 60.153 52.632 0.00 0.00 34.43 2.69
2821 2877 0.880278 TCTGTCGCCTGTGCTGTTTC 60.880 55.000 0.00 0.00 34.43 2.78
2822 2878 0.463654 TTCTGTCGCCTGTGCTGTTT 60.464 50.000 0.00 0.00 34.43 2.83
2823 2879 0.250467 ATTCTGTCGCCTGTGCTGTT 60.250 50.000 0.00 0.00 34.43 3.16
2824 2880 0.671781 GATTCTGTCGCCTGTGCTGT 60.672 55.000 0.00 0.00 34.43 4.40
2825 2881 0.390866 AGATTCTGTCGCCTGTGCTG 60.391 55.000 0.00 0.00 34.43 4.41
2826 2882 0.322975 AAGATTCTGTCGCCTGTGCT 59.677 50.000 0.00 0.00 34.43 4.40
2827 2883 0.445436 CAAGATTCTGTCGCCTGTGC 59.555 55.000 0.00 0.00 0.00 4.57
2828 2884 0.445436 GCAAGATTCTGTCGCCTGTG 59.555 55.000 0.00 0.00 0.00 3.66
2829 2885 0.674895 GGCAAGATTCTGTCGCCTGT 60.675 55.000 12.52 0.00 39.73 4.00
2830 2886 1.372087 GGGCAAGATTCTGTCGCCTG 61.372 60.000 17.04 0.50 42.56 4.85
2831 2887 1.078143 GGGCAAGATTCTGTCGCCT 60.078 57.895 17.04 0.00 42.56 5.52
2832 2888 1.078143 AGGGCAAGATTCTGTCGCC 60.078 57.895 11.71 11.71 42.21 5.54
2833 2889 1.372087 CCAGGGCAAGATTCTGTCGC 61.372 60.000 0.00 0.00 0.00 5.19
2834 2890 0.036010 ACCAGGGCAAGATTCTGTCG 60.036 55.000 0.00 0.00 0.00 4.35
2835 2891 1.003580 TGACCAGGGCAAGATTCTGTC 59.996 52.381 0.00 0.00 0.00 3.51
2836 2892 1.067295 TGACCAGGGCAAGATTCTGT 58.933 50.000 0.00 0.00 0.00 3.41
2837 2893 1.457346 GTGACCAGGGCAAGATTCTG 58.543 55.000 0.00 0.00 0.00 3.02
2838 2894 0.329596 GGTGACCAGGGCAAGATTCT 59.670 55.000 0.00 0.00 0.00 2.40
2839 2895 2.873797 GGTGACCAGGGCAAGATTC 58.126 57.895 0.00 0.00 0.00 2.52
2852 2908 4.324991 GTCGTGGGTGGGGGTGAC 62.325 72.222 0.00 0.00 0.00 3.67
2855 2911 3.605412 TATCGTCGTGGGTGGGGGT 62.605 63.158 0.00 0.00 0.00 4.95
2856 2912 2.760799 TATCGTCGTGGGTGGGGG 60.761 66.667 0.00 0.00 0.00 5.40
2857 2913 2.056223 AGTATCGTCGTGGGTGGGG 61.056 63.158 0.00 0.00 0.00 4.96
2858 2914 1.141019 CAGTATCGTCGTGGGTGGG 59.859 63.158 0.00 0.00 0.00 4.61
2859 2915 0.179145 GTCAGTATCGTCGTGGGTGG 60.179 60.000 0.00 0.00 0.00 4.61
2860 2916 0.522705 CGTCAGTATCGTCGTGGGTG 60.523 60.000 0.00 0.00 0.00 4.61
2861 2917 0.674581 TCGTCAGTATCGTCGTGGGT 60.675 55.000 0.00 0.00 0.00 4.51
2862 2918 0.247974 GTCGTCAGTATCGTCGTGGG 60.248 60.000 0.00 0.00 0.00 4.61
2863 2919 0.585764 CGTCGTCAGTATCGTCGTGG 60.586 60.000 0.00 0.00 35.85 4.94
2864 2920 0.367887 TCGTCGTCAGTATCGTCGTG 59.632 55.000 0.00 0.00 39.70 4.35
2865 2921 1.070821 TTCGTCGTCAGTATCGTCGT 58.929 50.000 0.00 0.00 39.70 4.34
2866 2922 1.830633 GTTTCGTCGTCAGTATCGTCG 59.169 52.381 0.00 0.00 39.95 5.12
2867 2923 2.172365 GGTTTCGTCGTCAGTATCGTC 58.828 52.381 0.00 0.00 0.00 4.20
2868 2924 1.536766 TGGTTTCGTCGTCAGTATCGT 59.463 47.619 0.00 0.00 0.00 3.73
2869 2925 2.159612 TCTGGTTTCGTCGTCAGTATCG 60.160 50.000 0.00 0.00 0.00 2.92
2870 2926 3.427243 CTCTGGTTTCGTCGTCAGTATC 58.573 50.000 0.00 0.00 0.00 2.24
2871 2927 2.163815 CCTCTGGTTTCGTCGTCAGTAT 59.836 50.000 0.00 0.00 0.00 2.12
2872 2928 1.538512 CCTCTGGTTTCGTCGTCAGTA 59.461 52.381 0.00 0.00 0.00 2.74
2873 2929 0.314302 CCTCTGGTTTCGTCGTCAGT 59.686 55.000 0.00 0.00 0.00 3.41
2874 2930 1.009389 GCCTCTGGTTTCGTCGTCAG 61.009 60.000 0.00 0.00 0.00 3.51
2875 2931 1.006571 GCCTCTGGTTTCGTCGTCA 60.007 57.895 0.00 0.00 0.00 4.35
2876 2932 1.006571 TGCCTCTGGTTTCGTCGTC 60.007 57.895 0.00 0.00 0.00 4.20
2877 2933 1.300697 GTGCCTCTGGTTTCGTCGT 60.301 57.895 0.00 0.00 0.00 4.34
2878 2934 2.372690 CGTGCCTCTGGTTTCGTCG 61.373 63.158 0.00 0.00 0.00 5.12
2879 2935 2.668280 GCGTGCCTCTGGTTTCGTC 61.668 63.158 0.00 0.00 0.00 4.20
2880 2936 2.665185 GCGTGCCTCTGGTTTCGT 60.665 61.111 0.00 0.00 0.00 3.85
2881 2937 2.664851 TGCGTGCCTCTGGTTTCG 60.665 61.111 0.00 0.00 0.00 3.46
2882 2938 2.970974 GCTGCGTGCCTCTGGTTTC 61.971 63.158 0.00 0.00 35.15 2.78
2883 2939 2.980233 GCTGCGTGCCTCTGGTTT 60.980 61.111 0.00 0.00 35.15 3.27
2906 2962 3.493303 GATGGGGGTGGAGGAGCC 61.493 72.222 0.00 0.00 42.09 4.70
2907 2963 3.493303 GGATGGGGGTGGAGGAGC 61.493 72.222 0.00 0.00 0.00 4.70
2908 2964 2.774351 GGGATGGGGGTGGAGGAG 60.774 72.222 0.00 0.00 0.00 3.69
2909 2965 4.448340 GGGGATGGGGGTGGAGGA 62.448 72.222 0.00 0.00 0.00 3.71
2910 2966 4.777546 TGGGGATGGGGGTGGAGG 62.778 72.222 0.00 0.00 0.00 4.30
2911 2967 2.370123 ATGGGGATGGGGGTGGAG 60.370 66.667 0.00 0.00 0.00 3.86
2912 2968 2.369568 GATGGGGATGGGGGTGGA 60.370 66.667 0.00 0.00 0.00 4.02
2913 2969 2.370123 AGATGGGGATGGGGGTGG 60.370 66.667 0.00 0.00 0.00 4.61
2914 2970 2.771321 CCAGATGGGGATGGGGGTG 61.771 68.421 0.00 0.00 0.00 4.61
2915 2971 2.370123 CCAGATGGGGATGGGGGT 60.370 66.667 0.00 0.00 0.00 4.95
2916 2972 3.907130 GCCAGATGGGGATGGGGG 61.907 72.222 0.12 0.00 37.04 5.40
2924 2980 2.819595 CACCGTTCGCCAGATGGG 60.820 66.667 0.12 0.00 40.85 4.00
2925 2981 2.819595 CCACCGTTCGCCAGATGG 60.820 66.667 0.00 0.00 38.53 3.51
2926 2982 3.499737 GCCACCGTTCGCCAGATG 61.500 66.667 0.00 0.00 0.00 2.90
2939 2995 4.666532 GAGCAACACACGCGCCAC 62.667 66.667 5.73 0.00 0.00 5.01
2946 3002 3.414700 CTCGCCGGAGCAACACAC 61.415 66.667 5.05 0.00 39.83 3.82
2947 3003 2.942796 ATCTCGCCGGAGCAACACA 61.943 57.895 5.05 0.00 40.26 3.72
2948 3004 2.125512 ATCTCGCCGGAGCAACAC 60.126 61.111 5.05 0.00 40.26 3.32
2949 3005 2.125552 CATCTCGCCGGAGCAACA 60.126 61.111 5.05 0.00 40.26 3.33
2950 3006 3.567797 GCATCTCGCCGGAGCAAC 61.568 66.667 5.05 0.00 40.26 4.17
2959 3015 2.484062 CCATTGGTGGGCATCTCGC 61.484 63.158 0.00 0.00 42.11 5.03
2960 3016 3.831883 CCATTGGTGGGCATCTCG 58.168 61.111 0.00 0.00 42.11 4.04
2967 3023 2.353610 GCTTGAGGCCATTGGTGGG 61.354 63.158 5.01 0.00 46.14 4.61
2969 3025 0.609957 TGAGCTTGAGGCCATTGGTG 60.610 55.000 5.01 0.00 43.05 4.17
2970 3026 0.112995 TTGAGCTTGAGGCCATTGGT 59.887 50.000 5.01 0.00 43.05 3.67
2971 3027 0.529378 GTTGAGCTTGAGGCCATTGG 59.471 55.000 5.01 0.00 43.05 3.16
2972 3028 0.169672 CGTTGAGCTTGAGGCCATTG 59.830 55.000 5.01 0.00 43.05 2.82
2973 3029 0.962356 CCGTTGAGCTTGAGGCCATT 60.962 55.000 5.01 0.00 43.05 3.16
2974 3030 1.377725 CCGTTGAGCTTGAGGCCAT 60.378 57.895 5.01 0.00 43.05 4.40
2975 3031 2.032528 CCGTTGAGCTTGAGGCCA 59.967 61.111 5.01 0.00 43.05 5.36
2976 3032 2.180159 TACCCGTTGAGCTTGAGGCC 62.180 60.000 0.00 0.00 43.05 5.19
2977 3033 0.107654 ATACCCGTTGAGCTTGAGGC 60.108 55.000 0.00 0.00 42.19 4.70
2978 3034 1.066143 ACATACCCGTTGAGCTTGAGG 60.066 52.381 0.00 0.00 0.00 3.86
2979 3035 2.386661 ACATACCCGTTGAGCTTGAG 57.613 50.000 0.00 0.00 0.00 3.02
2980 3036 2.811431 CAAACATACCCGTTGAGCTTGA 59.189 45.455 0.00 0.00 0.00 3.02
2981 3037 2.668279 GCAAACATACCCGTTGAGCTTG 60.668 50.000 0.00 0.00 31.59 4.01
2982 3038 1.539827 GCAAACATACCCGTTGAGCTT 59.460 47.619 0.00 0.00 31.59 3.74
2983 3039 1.165270 GCAAACATACCCGTTGAGCT 58.835 50.000 0.00 0.00 31.59 4.09
2984 3040 1.130561 GAGCAAACATACCCGTTGAGC 59.869 52.381 0.00 0.00 33.36 4.26
2985 3041 1.737793 GGAGCAAACATACCCGTTGAG 59.262 52.381 0.00 0.00 0.00 3.02
2986 3042 1.612199 GGGAGCAAACATACCCGTTGA 60.612 52.381 0.00 0.00 32.73 3.18
2987 3043 0.808755 GGGAGCAAACATACCCGTTG 59.191 55.000 0.00 0.00 32.73 4.10
2988 3044 0.323087 GGGGAGCAAACATACCCGTT 60.323 55.000 0.00 0.00 42.90 4.44
2989 3045 1.301954 GGGGAGCAAACATACCCGT 59.698 57.895 0.00 0.00 42.90 5.28
2990 3046 1.453197 GGGGGAGCAAACATACCCG 60.453 63.158 0.00 0.00 42.42 5.28
2991 3047 0.106669 GAGGGGGAGCAAACATACCC 60.107 60.000 0.00 0.00 41.41 3.69
2992 3048 0.919710 AGAGGGGGAGCAAACATACC 59.080 55.000 0.00 0.00 0.00 2.73
2993 3049 1.408822 CCAGAGGGGGAGCAAACATAC 60.409 57.143 0.00 0.00 0.00 2.39
2994 3050 0.918983 CCAGAGGGGGAGCAAACATA 59.081 55.000 0.00 0.00 0.00 2.29
2995 3051 1.693640 CCAGAGGGGGAGCAAACAT 59.306 57.895 0.00 0.00 0.00 2.71
2996 3052 3.170362 CCAGAGGGGGAGCAAACA 58.830 61.111 0.00 0.00 0.00 2.83
2997 3053 2.361737 GCCAGAGGGGGAGCAAAC 60.362 66.667 0.00 0.00 37.04 2.93
2998 3054 3.661648 GGCCAGAGGGGGAGCAAA 61.662 66.667 0.00 0.00 37.04 3.68
3001 3057 4.432741 GTTGGCCAGAGGGGGAGC 62.433 72.222 5.11 0.00 37.04 4.70
3002 3058 3.732849 GGTTGGCCAGAGGGGGAG 61.733 72.222 5.11 0.00 37.04 4.30
3005 3061 3.732849 GAGGGTTGGCCAGAGGGG 61.733 72.222 5.11 0.00 40.85 4.79
3006 3062 2.935481 TGAGGGTTGGCCAGAGGG 60.935 66.667 5.11 0.00 36.17 4.30
3007 3063 1.783250 AAGTGAGGGTTGGCCAGAGG 61.783 60.000 5.11 0.00 36.17 3.69
3008 3064 0.607489 CAAGTGAGGGTTGGCCAGAG 60.607 60.000 5.11 0.00 36.17 3.35
3009 3065 1.059584 TCAAGTGAGGGTTGGCCAGA 61.060 55.000 5.11 0.00 36.17 3.86
3010 3066 0.178992 TTCAAGTGAGGGTTGGCCAG 60.179 55.000 5.11 0.00 36.17 4.85
3011 3067 0.467290 GTTCAAGTGAGGGTTGGCCA 60.467 55.000 0.00 0.00 36.17 5.36
3012 3068 0.178990 AGTTCAAGTGAGGGTTGGCC 60.179 55.000 0.00 0.00 0.00 5.36
3013 3069 2.224548 ACTAGTTCAAGTGAGGGTTGGC 60.225 50.000 0.00 0.00 0.00 4.52
3014 3070 3.771577 ACTAGTTCAAGTGAGGGTTGG 57.228 47.619 0.00 0.00 0.00 3.77
3015 3071 4.451900 ACAACTAGTTCAAGTGAGGGTTG 58.548 43.478 4.77 0.00 38.75 3.77
3016 3072 4.409247 AGACAACTAGTTCAAGTGAGGGTT 59.591 41.667 4.77 0.00 0.00 4.11
3017 3073 3.967987 AGACAACTAGTTCAAGTGAGGGT 59.032 43.478 4.77 0.00 0.00 4.34
3018 3074 4.202264 ACAGACAACTAGTTCAAGTGAGGG 60.202 45.833 4.77 0.00 0.00 4.30
3019 3075 4.950050 ACAGACAACTAGTTCAAGTGAGG 58.050 43.478 4.77 0.00 0.00 3.86
3020 3076 6.042777 TGAACAGACAACTAGTTCAAGTGAG 58.957 40.000 4.77 0.00 45.95 3.51
3021 3077 5.972935 TGAACAGACAACTAGTTCAAGTGA 58.027 37.500 4.77 0.00 45.95 3.41
3026 3082 3.713288 CGGTGAACAGACAACTAGTTCA 58.287 45.455 4.77 0.00 46.53 3.18
3027 3083 2.475487 GCGGTGAACAGACAACTAGTTC 59.525 50.000 4.77 0.00 41.42 3.01
3028 3084 2.480845 GCGGTGAACAGACAACTAGTT 58.519 47.619 1.12 1.12 0.00 2.24
3029 3085 1.270147 GGCGGTGAACAGACAACTAGT 60.270 52.381 0.00 0.00 0.00 2.57
3030 3086 1.429463 GGCGGTGAACAGACAACTAG 58.571 55.000 0.00 0.00 0.00 2.57
3031 3087 0.319211 CGGCGGTGAACAGACAACTA 60.319 55.000 0.00 0.00 0.00 2.24
3032 3088 1.594293 CGGCGGTGAACAGACAACT 60.594 57.895 0.00 0.00 0.00 3.16
3033 3089 2.935955 CGGCGGTGAACAGACAAC 59.064 61.111 0.00 0.00 0.00 3.32
3034 3090 2.970324 GCGGCGGTGAACAGACAA 60.970 61.111 9.78 0.00 0.00 3.18
3047 3103 1.955495 AAATCCCCAAAATCCGCGGC 61.955 55.000 23.51 0.00 0.00 6.53
3048 3104 0.102300 GAAATCCCCAAAATCCGCGG 59.898 55.000 22.12 22.12 0.00 6.46
3049 3105 1.102978 AGAAATCCCCAAAATCCGCG 58.897 50.000 0.00 0.00 0.00 6.46
3050 3106 3.181479 GGTAAGAAATCCCCAAAATCCGC 60.181 47.826 0.00 0.00 0.00 5.54
3051 3107 4.020543 TGGTAAGAAATCCCCAAAATCCG 58.979 43.478 0.00 0.00 0.00 4.18
3052 3108 5.483937 ACTTGGTAAGAAATCCCCAAAATCC 59.516 40.000 0.00 0.00 36.58 3.01
3053 3109 6.605471 ACTTGGTAAGAAATCCCCAAAATC 57.395 37.500 0.00 0.00 36.58 2.17
3054 3110 6.239858 CCAACTTGGTAAGAAATCCCCAAAAT 60.240 38.462 0.00 0.00 36.58 1.82
3055 3111 5.071115 CCAACTTGGTAAGAAATCCCCAAAA 59.929 40.000 0.00 0.00 36.58 2.44
3056 3112 4.591072 CCAACTTGGTAAGAAATCCCCAAA 59.409 41.667 0.00 0.00 36.58 3.28
3057 3113 4.156477 CCAACTTGGTAAGAAATCCCCAA 58.844 43.478 0.00 0.00 35.72 4.12
3058 3114 3.773560 CCAACTTGGTAAGAAATCCCCA 58.226 45.455 0.00 0.00 31.35 4.96
3059 3115 2.496070 GCCAACTTGGTAAGAAATCCCC 59.504 50.000 9.63 0.00 40.46 4.81
3060 3116 3.431415 AGCCAACTTGGTAAGAAATCCC 58.569 45.455 9.63 0.00 40.46 3.85
3061 3117 4.079253 TGAGCCAACTTGGTAAGAAATCC 58.921 43.478 9.63 0.00 40.46 3.01
3062 3118 4.379918 GCTGAGCCAACTTGGTAAGAAATC 60.380 45.833 9.63 0.00 40.46 2.17
3063 3119 3.507622 GCTGAGCCAACTTGGTAAGAAAT 59.492 43.478 9.63 0.00 40.46 2.17
3064 3120 2.884639 GCTGAGCCAACTTGGTAAGAAA 59.115 45.455 9.63 0.00 40.46 2.52
3065 3121 2.106511 AGCTGAGCCAACTTGGTAAGAA 59.893 45.455 9.63 0.00 40.46 2.52
3066 3122 1.699634 AGCTGAGCCAACTTGGTAAGA 59.300 47.619 9.63 0.00 40.46 2.10
3067 3123 2.191128 AGCTGAGCCAACTTGGTAAG 57.809 50.000 9.63 6.04 40.46 2.34
3068 3124 2.504367 GAAGCTGAGCCAACTTGGTAA 58.496 47.619 9.63 0.00 40.46 2.85
3069 3125 1.608025 CGAAGCTGAGCCAACTTGGTA 60.608 52.381 9.63 0.00 40.46 3.25
3070 3126 0.886490 CGAAGCTGAGCCAACTTGGT 60.886 55.000 9.63 0.00 40.46 3.67
3071 3127 0.603707 TCGAAGCTGAGCCAACTTGG 60.604 55.000 0.00 3.10 41.55 3.61
3072 3128 1.446907 ATCGAAGCTGAGCCAACTTG 58.553 50.000 0.00 0.00 0.00 3.16
3073 3129 2.079925 GAATCGAAGCTGAGCCAACTT 58.920 47.619 0.00 0.00 0.00 2.66
3074 3130 1.002430 TGAATCGAAGCTGAGCCAACT 59.998 47.619 0.00 0.00 0.00 3.16
3075 3131 1.442769 TGAATCGAAGCTGAGCCAAC 58.557 50.000 0.00 0.00 0.00 3.77
3076 3132 2.011947 CATGAATCGAAGCTGAGCCAA 58.988 47.619 0.00 0.00 0.00 4.52
3077 3133 1.660167 CATGAATCGAAGCTGAGCCA 58.340 50.000 0.00 0.00 0.00 4.75
3078 3134 0.307146 GCATGAATCGAAGCTGAGCC 59.693 55.000 0.00 0.00 0.00 4.70
3079 3135 1.003759 CTGCATGAATCGAAGCTGAGC 60.004 52.381 0.00 0.00 0.00 4.26
3080 3136 1.598132 CCTGCATGAATCGAAGCTGAG 59.402 52.381 0.00 0.00 0.00 3.35
3081 3137 1.207811 TCCTGCATGAATCGAAGCTGA 59.792 47.619 0.00 0.00 0.00 4.26
3082 3138 1.660167 TCCTGCATGAATCGAAGCTG 58.340 50.000 0.00 0.00 0.00 4.24
3083 3139 2.219458 CATCCTGCATGAATCGAAGCT 58.781 47.619 0.00 0.00 33.80 3.74
3084 3140 1.945394 ACATCCTGCATGAATCGAAGC 59.055 47.619 0.00 0.00 36.21 3.86
3085 3141 2.941064 ACACATCCTGCATGAATCGAAG 59.059 45.455 0.00 0.00 36.21 3.79
3086 3142 2.679336 CACACATCCTGCATGAATCGAA 59.321 45.455 0.00 0.00 36.21 3.71
3087 3143 2.282407 CACACATCCTGCATGAATCGA 58.718 47.619 0.00 0.00 36.21 3.59
3088 3144 1.268386 GCACACATCCTGCATGAATCG 60.268 52.381 0.00 0.00 36.21 3.34
3089 3145 2.022195 AGCACACATCCTGCATGAATC 58.978 47.619 0.00 0.00 37.08 2.52
3090 3146 1.749063 CAGCACACATCCTGCATGAAT 59.251 47.619 0.00 0.00 37.08 2.57
3091 3147 1.170442 CAGCACACATCCTGCATGAA 58.830 50.000 0.00 0.00 37.08 2.57
3092 3148 2.862738 CAGCACACATCCTGCATGA 58.137 52.632 0.00 0.00 37.08 3.07
3116 3172 3.056328 GAAACTGCTCCACGGGCC 61.056 66.667 0.00 0.00 0.00 5.80


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.