Multiple sequence alignment - TraesCS2B01G112600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G112600 chr2B 100.000 2999 0 0 1 2999 75846392 75849390 0.000000e+00 5539.0
1 TraesCS2B01G112600 chr2B 88.976 127 12 2 168 294 651354108 651353984 4.000000e-34 156.0
2 TraesCS2B01G112600 chr2B 87.692 65 8 0 2922 2986 75897140 75897204 3.210000e-10 76.8
3 TraesCS2B01G112600 chr2B 94.595 37 2 0 1031 1067 682741188 682741224 1.160000e-04 58.4
4 TraesCS2B01G112600 chr2D 90.016 2514 120 52 537 2969 48132624 48135087 0.000000e+00 3131.0
5 TraesCS2B01G112600 chr2D 85.263 95 6 3 397 491 26618685 26618771 1.140000e-14 91.6
6 TraesCS2B01G112600 chr2A 91.933 1847 53 23 537 2333 51009132 51007332 0.000000e+00 2497.0
7 TraesCS2B01G112600 chr2A 84.195 658 50 22 2372 2996 51007244 51006608 9.260000e-165 590.0
8 TraesCS2B01G112600 chr4D 89.137 313 34 0 1169 1481 315597323 315597635 1.010000e-104 390.0
9 TraesCS2B01G112600 chr4D 84.536 97 10 4 398 492 451274406 451274313 1.140000e-14 91.6
10 TraesCS2B01G112600 chr4D 82.609 69 12 0 1299 1367 497126486 497126554 8.980000e-06 62.1
11 TraesCS2B01G112600 chr4A 88.710 310 35 0 1172 1481 159294850 159294541 2.180000e-101 379.0
12 TraesCS2B01G112600 chr4B 88.599 307 35 0 1169 1475 393406270 393406576 1.020000e-99 374.0
13 TraesCS2B01G112600 chr4B 86.071 280 35 3 3 281 188648736 188648460 6.280000e-77 298.0
14 TraesCS2B01G112600 chr4B 97.143 175 5 0 3 177 400681922 400681748 2.260000e-76 296.0
15 TraesCS2B01G112600 chr4B 88.722 133 13 2 168 300 157758285 157758155 8.600000e-36 161.0
16 TraesCS2B01G112600 chr4B 82.609 69 12 0 1299 1367 637622201 637622269 8.980000e-06 62.1
17 TraesCS2B01G112600 chr6D 89.399 283 29 1 1 283 454801246 454801527 3.680000e-94 355.0
18 TraesCS2B01G112600 chr3D 81.208 447 75 7 1041 1481 525917816 525917373 4.760000e-93 351.0
19 TraesCS2B01G112600 chr3D 85.096 208 29 2 1169 1375 13168563 13168357 8.420000e-51 211.0
20 TraesCS2B01G112600 chr3D 84.694 98 11 3 397 492 424659674 424659579 8.850000e-16 95.3
21 TraesCS2B01G112600 chr3A 86.879 282 33 3 3 283 10301642 10301920 2.240000e-81 313.0
22 TraesCS2B01G112600 chr3A 85.577 208 28 2 1169 1375 24037586 24037792 1.810000e-52 217.0
23 TraesCS2B01G112600 chr3A 84.694 98 11 4 397 492 564342458 564342553 8.850000e-16 95.3
24 TraesCS2B01G112600 chr5A 85.714 287 35 5 3 288 670399156 670399437 6.280000e-77 298.0
25 TraesCS2B01G112600 chr5B 89.083 229 24 1 3 231 363261397 363261170 1.760000e-72 283.0
26 TraesCS2B01G112600 chr5B 83.168 101 10 5 397 495 17982697 17982602 5.330000e-13 86.1
27 TraesCS2B01G112600 chr1B 89.954 219 21 1 13 231 329484948 329484731 6.330000e-72 281.0
28 TraesCS2B01G112600 chr1B 87.129 202 24 2 1165 1365 659780379 659780179 8.360000e-56 228.0
29 TraesCS2B01G112600 chr1B 83.333 96 11 5 398 491 368223119 368223027 1.920000e-12 84.2
30 TraesCS2B01G112600 chr5D 90.476 210 14 6 20 225 141034423 141034216 3.810000e-69 272.0
31 TraesCS2B01G112600 chr5D 84.099 283 38 4 3 281 542970946 542971225 1.770000e-67 267.0
32 TraesCS2B01G112600 chr1A 82.524 309 50 3 1169 1475 58946920 58947226 4.930000e-68 268.0
33 TraesCS2B01G112600 chr1A 88.384 198 21 2 1169 1365 569139382 569139186 1.390000e-58 237.0
34 TraesCS2B01G112600 chr1A 81.443 194 30 6 1177 1367 23339871 23340061 1.440000e-33 154.0
35 TraesCS2B01G112600 chr1A 79.121 182 28 8 1184 1360 551592897 551592721 1.890000e-22 117.0
36 TraesCS2B01G112600 chr1D 88.288 222 19 5 3 220 365727331 365727113 2.970000e-65 259.0
37 TraesCS2B01G112600 chr1D 86.869 198 24 2 1169 1365 474510341 474510145 1.400000e-53 220.0
38 TraesCS2B01G112600 chr1D 82.383 193 30 4 1177 1367 22437233 22437043 6.650000e-37 165.0
39 TraesCS2B01G112600 chr1D 79.121 182 28 8 1184 1360 459880394 459880218 1.890000e-22 117.0
40 TraesCS2B01G112600 chr3B 86.058 208 27 2 1169 1375 18847521 18847315 3.890000e-54 222.0
41 TraesCS2B01G112600 chr7D 85.263 95 5 6 398 492 113720704 113720619 4.120000e-14 89.8
42 TraesCS2B01G112600 chr7A 84.043 94 9 4 398 487 11106062 11105971 5.330000e-13 86.1
43 TraesCS2B01G112600 chrUn 84.043 94 8 3 398 491 247968026 247967940 1.920000e-12 84.2
44 TraesCS2B01G112600 chr6A 88.235 68 6 2 1301 1367 428426492 428426558 2.480000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G112600 chr2B 75846392 75849390 2998 False 5539.0 5539 100.000 1 2999 1 chr2B.!!$F1 2998
1 TraesCS2B01G112600 chr2D 48132624 48135087 2463 False 3131.0 3131 90.016 537 2969 1 chr2D.!!$F2 2432
2 TraesCS2B01G112600 chr2A 51006608 51009132 2524 True 1543.5 2497 88.064 537 2996 2 chr2A.!!$R1 2459

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
21 22 0.115745 ACTACTCCCTCCGTTCCCAA 59.884 55.0 0.0 0.0 0.0 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2012 2065 1.189524 CCCAGGTCACCGGTAGTTGA 61.19 60.0 6.87 0.0 0.0 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.277962 TGACTACTCCCTCCGTTCC 57.722 57.895 0.00 0.00 0.00 3.62
19 20 0.324091 TGACTACTCCCTCCGTTCCC 60.324 60.000 0.00 0.00 0.00 3.97
20 21 0.324091 GACTACTCCCTCCGTTCCCA 60.324 60.000 0.00 0.00 0.00 4.37
21 22 0.115745 ACTACTCCCTCCGTTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
22 23 1.272807 CTACTCCCTCCGTTCCCAAA 58.727 55.000 0.00 0.00 0.00 3.28
23 24 1.838077 CTACTCCCTCCGTTCCCAAAT 59.162 52.381 0.00 0.00 0.00 2.32
24 25 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
25 26 2.271777 ACTCCCTCCGTTCCCAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
26 27 2.850568 ACTCCCTCCGTTCCCAAATAAT 59.149 45.455 0.00 0.00 0.00 1.28
27 28 3.268595 ACTCCCTCCGTTCCCAAATAATT 59.731 43.478 0.00 0.00 0.00 1.40
28 29 3.626930 TCCCTCCGTTCCCAAATAATTG 58.373 45.455 0.00 0.00 36.25 2.32
29 30 3.010808 TCCCTCCGTTCCCAAATAATTGT 59.989 43.478 0.00 0.00 34.60 2.71
30 31 3.380320 CCCTCCGTTCCCAAATAATTGTC 59.620 47.826 0.00 0.00 34.60 3.18
31 32 4.270008 CCTCCGTTCCCAAATAATTGTCT 58.730 43.478 0.00 0.00 34.60 3.41
32 33 4.705023 CCTCCGTTCCCAAATAATTGTCTT 59.295 41.667 0.00 0.00 34.60 3.01
33 34 5.185056 CCTCCGTTCCCAAATAATTGTCTTT 59.815 40.000 0.00 0.00 34.60 2.52
34 35 6.262193 TCCGTTCCCAAATAATTGTCTTTC 57.738 37.500 0.00 0.00 34.60 2.62
35 36 6.007703 TCCGTTCCCAAATAATTGTCTTTCT 58.992 36.000 0.00 0.00 34.60 2.52
36 37 7.169591 TCCGTTCCCAAATAATTGTCTTTCTA 58.830 34.615 0.00 0.00 34.60 2.10
37 38 7.335924 TCCGTTCCCAAATAATTGTCTTTCTAG 59.664 37.037 0.00 0.00 34.60 2.43
38 39 6.967199 CGTTCCCAAATAATTGTCTTTCTAGC 59.033 38.462 0.00 0.00 34.60 3.42
39 40 7.258441 GTTCCCAAATAATTGTCTTTCTAGCC 58.742 38.462 0.00 0.00 34.60 3.93
40 41 6.489603 TCCCAAATAATTGTCTTTCTAGCCA 58.510 36.000 0.00 0.00 34.60 4.75
41 42 7.125391 TCCCAAATAATTGTCTTTCTAGCCAT 58.875 34.615 0.00 0.00 34.60 4.40
42 43 7.285401 TCCCAAATAATTGTCTTTCTAGCCATC 59.715 37.037 0.00 0.00 34.60 3.51
43 44 7.286316 CCCAAATAATTGTCTTTCTAGCCATCT 59.714 37.037 0.00 0.00 34.60 2.90
44 45 8.348507 CCAAATAATTGTCTTTCTAGCCATCTC 58.651 37.037 0.00 0.00 34.60 2.75
45 46 8.896744 CAAATAATTGTCTTTCTAGCCATCTCA 58.103 33.333 0.00 0.00 0.00 3.27
46 47 9.466497 AAATAATTGTCTTTCTAGCCATCTCAA 57.534 29.630 0.00 0.00 0.00 3.02
47 48 9.466497 AATAATTGTCTTTCTAGCCATCTCAAA 57.534 29.630 0.00 0.00 0.00 2.69
48 49 7.951347 AATTGTCTTTCTAGCCATCTCAAAT 57.049 32.000 0.00 0.00 0.00 2.32
49 50 6.748333 TTGTCTTTCTAGCCATCTCAAATG 57.252 37.500 0.00 0.00 0.00 2.32
50 51 5.188434 TGTCTTTCTAGCCATCTCAAATGG 58.812 41.667 0.00 0.00 41.99 3.16
51 52 5.045651 TGTCTTTCTAGCCATCTCAAATGGA 60.046 40.000 8.23 0.00 41.64 3.41
52 53 5.295540 GTCTTTCTAGCCATCTCAAATGGAC 59.704 44.000 8.23 0.19 41.64 4.02
53 54 5.190528 TCTTTCTAGCCATCTCAAATGGACT 59.809 40.000 8.23 7.12 41.64 3.85
54 55 6.384015 TCTTTCTAGCCATCTCAAATGGACTA 59.616 38.462 8.23 7.79 41.64 2.59
55 56 5.537300 TCTAGCCATCTCAAATGGACTAC 57.463 43.478 8.23 0.00 41.64 2.73
56 57 4.962362 TCTAGCCATCTCAAATGGACTACA 59.038 41.667 8.23 0.00 41.64 2.74
57 58 4.574674 AGCCATCTCAAATGGACTACAA 57.425 40.909 8.23 0.00 41.64 2.41
58 59 4.265073 AGCCATCTCAAATGGACTACAAC 58.735 43.478 8.23 0.00 41.64 3.32
59 60 4.009675 GCCATCTCAAATGGACTACAACA 58.990 43.478 8.23 0.00 41.64 3.33
60 61 4.641989 GCCATCTCAAATGGACTACAACAT 59.358 41.667 8.23 0.00 41.64 2.71
61 62 5.822519 GCCATCTCAAATGGACTACAACATA 59.177 40.000 8.23 0.00 41.64 2.29
62 63 6.238484 GCCATCTCAAATGGACTACAACATAC 60.238 42.308 8.23 0.00 41.64 2.39
63 64 6.018751 CCATCTCAAATGGACTACAACATACG 60.019 42.308 0.00 0.00 41.64 3.06
64 65 5.416083 TCTCAAATGGACTACAACATACGG 58.584 41.667 0.00 0.00 0.00 4.02
65 66 5.186215 TCTCAAATGGACTACAACATACGGA 59.814 40.000 0.00 0.00 0.00 4.69
66 67 5.984725 TCAAATGGACTACAACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
67 68 5.815222 TCAAATGGACTACAACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
69 70 6.474140 AATGGACTACAACATACGGATGTA 57.526 37.500 15.10 0.00 45.93 2.29
70 71 6.665992 ATGGACTACAACATACGGATGTAT 57.334 37.500 15.10 8.21 45.93 2.29
71 72 7.770366 ATGGACTACAACATACGGATGTATA 57.230 36.000 15.10 8.98 45.93 1.47
72 73 7.770366 TGGACTACAACATACGGATGTATAT 57.230 36.000 15.10 5.13 45.93 0.86
73 74 8.866970 TGGACTACAACATACGGATGTATATA 57.133 34.615 15.10 6.07 45.93 0.86
74 75 8.953313 TGGACTACAACATACGGATGTATATAG 58.047 37.037 15.10 16.95 45.93 1.31
75 76 9.170734 GGACTACAACATACGGATGTATATAGA 57.829 37.037 23.06 5.58 45.93 1.98
76 77 9.985318 GACTACAACATACGGATGTATATAGAC 57.015 37.037 23.06 16.72 45.93 2.59
77 78 9.511272 ACTACAACATACGGATGTATATAGACA 57.489 33.333 23.06 2.07 45.93 3.41
80 81 8.803235 ACAACATACGGATGTATATAGACATGT 58.197 33.333 15.10 8.40 45.93 3.21
81 82 9.639601 CAACATACGGATGTATATAGACATGTT 57.360 33.333 15.10 12.25 45.93 2.71
98 99 8.764524 AGACATGTTTTAGAGTGTAGATTCAC 57.235 34.615 0.00 0.00 38.46 3.18
109 110 6.734104 AGTGTAGATTCACTCAATTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
110 111 5.645497 AGTGTAGATTCACTCAATTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
111 112 4.631377 TGTAGATTCACTCAATTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
112 113 3.679389 AGATTCACTCAATTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
113 114 4.832248 AGATTCACTCAATTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
114 115 5.431765 AGATTCACTCAATTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
115 116 4.944962 TTCACTCAATTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
116 117 3.937814 TCACTCAATTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
117 118 5.079689 TCACTCAATTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
118 119 5.109210 TCACTCAATTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
119 120 4.870426 CACTCAATTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
120 121 5.005779 CACTCAATTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
121 122 5.079689 TCAATTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
122 123 4.868171 TCAATTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
123 124 4.737855 ATTTGCTCCGTATGTAGTCACT 57.262 40.909 0.00 0.00 0.00 3.41
124 125 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
125 126 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
126 127 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
127 128 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
128 129 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
129 130 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
130 131 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
131 132 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
132 133 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
133 134 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
134 135 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
135 136 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
136 137 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
137 138 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
138 139 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
139 140 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
140 141 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
141 142 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
142 143 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
143 144 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
144 145 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
145 146 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
146 147 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
147 148 9.566432 ACTTGTTGAAATCTCTAGAAAGACAAT 57.434 29.630 0.00 0.00 0.00 2.71
160 161 9.595823 TCTAGAAAGACAATTATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
161 162 9.595823 CTAGAAAGACAATTATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
162 163 8.494016 AGAAAGACAATTATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
163 164 7.553044 AGAAAGACAATTATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
164 165 5.681639 AGACAATTATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
165 166 5.427481 AGACAATTATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
166 167 5.681639 ACAATTATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
167 168 5.191124 ACAATTATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
168 169 6.384886 ACAATTATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
169 170 5.859205 TTATTTAGGAACGGAGGGAGTAC 57.141 43.478 0.00 0.00 0.00 2.73
170 171 2.905415 TTAGGAACGGAGGGAGTACA 57.095 50.000 0.00 0.00 0.00 2.90
171 172 3.393426 TTAGGAACGGAGGGAGTACAT 57.607 47.619 0.00 0.00 0.00 2.29
172 173 4.524802 TTAGGAACGGAGGGAGTACATA 57.475 45.455 0.00 0.00 0.00 2.29
173 174 3.614568 AGGAACGGAGGGAGTACATAT 57.385 47.619 0.00 0.00 0.00 1.78
174 175 3.231818 AGGAACGGAGGGAGTACATATG 58.768 50.000 0.00 0.00 0.00 1.78
175 176 2.299297 GGAACGGAGGGAGTACATATGG 59.701 54.545 7.80 0.00 0.00 2.74
176 177 3.228453 GAACGGAGGGAGTACATATGGA 58.772 50.000 7.80 0.00 0.00 3.41
177 178 2.877866 ACGGAGGGAGTACATATGGAG 58.122 52.381 7.80 0.00 0.00 3.86
178 179 2.445905 ACGGAGGGAGTACATATGGAGA 59.554 50.000 7.80 0.00 0.00 3.71
179 180 3.117246 ACGGAGGGAGTACATATGGAGAA 60.117 47.826 7.80 0.00 0.00 2.87
180 181 3.895656 CGGAGGGAGTACATATGGAGAAA 59.104 47.826 7.80 0.00 0.00 2.52
181 182 4.021894 CGGAGGGAGTACATATGGAGAAAG 60.022 50.000 7.80 0.00 0.00 2.62
182 183 5.148502 GGAGGGAGTACATATGGAGAAAGA 58.851 45.833 7.80 0.00 0.00 2.52
183 184 5.782845 GGAGGGAGTACATATGGAGAAAGAT 59.217 44.000 7.80 0.00 0.00 2.40
184 185 6.295575 GGAGGGAGTACATATGGAGAAAGATG 60.296 46.154 7.80 0.00 0.00 2.90
185 186 6.385443 AGGGAGTACATATGGAGAAAGATGA 58.615 40.000 7.80 0.00 0.00 2.92
186 187 6.846505 AGGGAGTACATATGGAGAAAGATGAA 59.153 38.462 7.80 0.00 0.00 2.57
187 188 7.515514 AGGGAGTACATATGGAGAAAGATGAAT 59.484 37.037 7.80 0.00 0.00 2.57
188 189 7.605691 GGGAGTACATATGGAGAAAGATGAATG 59.394 40.741 7.80 0.00 0.00 2.67
189 190 8.370940 GGAGTACATATGGAGAAAGATGAATGA 58.629 37.037 7.80 0.00 0.00 2.57
190 191 9.770097 GAGTACATATGGAGAAAGATGAATGAA 57.230 33.333 7.80 0.00 0.00 2.57
197 198 8.674263 ATGGAGAAAGATGAATGAATCTACAC 57.326 34.615 0.00 0.00 35.83 2.90
198 199 7.855375 TGGAGAAAGATGAATGAATCTACACT 58.145 34.615 0.00 0.00 35.83 3.55
199 200 7.984050 TGGAGAAAGATGAATGAATCTACACTC 59.016 37.037 0.00 0.00 35.83 3.51
200 201 8.203485 GGAGAAAGATGAATGAATCTACACTCT 58.797 37.037 0.00 0.00 35.83 3.24
279 280 9.453830 AGATAAATATTTAGGAACTGAGGGAGT 57.546 33.333 13.15 0.00 41.52 3.85
282 283 8.625467 AAATATTTAGGAACTGAGGGAGTACT 57.375 34.615 0.00 0.00 41.52 2.73
283 284 9.725206 AAATATTTAGGAACTGAGGGAGTACTA 57.275 33.333 0.00 0.00 41.52 1.82
284 285 9.900112 AATATTTAGGAACTGAGGGAGTACTAT 57.100 33.333 0.00 0.00 41.52 2.12
285 286 9.900112 ATATTTAGGAACTGAGGGAGTACTATT 57.100 33.333 0.00 0.00 41.52 1.73
286 287 7.419711 TTTAGGAACTGAGGGAGTACTATTG 57.580 40.000 0.00 0.00 41.52 1.90
287 288 4.949121 AGGAACTGAGGGAGTACTATTGT 58.051 43.478 0.00 0.00 37.18 2.71
288 289 6.088541 AGGAACTGAGGGAGTACTATTGTA 57.911 41.667 0.00 0.00 37.18 2.41
289 290 6.130569 AGGAACTGAGGGAGTACTATTGTAG 58.869 44.000 0.00 0.00 37.18 2.74
290 291 5.892686 GGAACTGAGGGAGTACTATTGTAGT 59.107 44.000 0.00 0.00 42.68 2.73
291 292 7.059156 GGAACTGAGGGAGTACTATTGTAGTA 58.941 42.308 0.00 0.00 40.14 1.82
292 293 7.724951 GGAACTGAGGGAGTACTATTGTAGTAT 59.275 40.741 0.00 0.00 42.68 2.12
293 294 9.790344 GAACTGAGGGAGTACTATTGTAGTATA 57.210 37.037 0.00 0.00 42.68 1.47
295 296 9.742144 ACTGAGGGAGTACTATTGTAGTATATG 57.258 37.037 0.00 0.00 42.68 1.78
296 297 8.577048 TGAGGGAGTACTATTGTAGTATATGC 57.423 38.462 0.00 0.00 42.68 3.14
297 298 7.614583 TGAGGGAGTACTATTGTAGTATATGCC 59.385 40.741 0.00 11.49 42.68 4.40
298 299 7.476153 AGGGAGTACTATTGTAGTATATGCCA 58.524 38.462 17.12 0.00 42.68 4.92
299 300 8.123130 AGGGAGTACTATTGTAGTATATGCCAT 58.877 37.037 17.12 7.00 42.68 4.40
300 301 8.759782 GGGAGTACTATTGTAGTATATGCCATT 58.240 37.037 0.00 0.00 42.68 3.16
301 302 9.587772 GGAGTACTATTGTAGTATATGCCATTG 57.412 37.037 0.00 0.00 42.68 2.82
302 303 9.587772 GAGTACTATTGTAGTATATGCCATTGG 57.412 37.037 0.00 0.00 42.68 3.16
303 304 9.101325 AGTACTATTGTAGTATATGCCATTGGT 57.899 33.333 4.26 0.00 42.68 3.67
304 305 9.151471 GTACTATTGTAGTATATGCCATTGGTG 57.849 37.037 4.26 0.00 42.68 4.17
305 306 7.973402 ACTATTGTAGTATATGCCATTGGTGA 58.027 34.615 4.26 0.00 37.23 4.02
306 307 7.878127 ACTATTGTAGTATATGCCATTGGTGAC 59.122 37.037 4.26 0.00 37.23 3.67
307 308 5.622346 TGTAGTATATGCCATTGGTGACA 57.378 39.130 4.26 0.00 39.83 3.58
319 320 2.886862 TGGTGACAAATTGGTGCAAG 57.113 45.000 0.00 0.00 37.44 4.01
320 321 1.411977 TGGTGACAAATTGGTGCAAGG 59.588 47.619 0.00 0.00 37.44 3.61
321 322 1.412343 GGTGACAAATTGGTGCAAGGT 59.588 47.619 0.00 0.00 0.00 3.50
322 323 2.625790 GGTGACAAATTGGTGCAAGGTA 59.374 45.455 0.00 0.00 0.00 3.08
323 324 3.258123 GGTGACAAATTGGTGCAAGGTAT 59.742 43.478 0.00 0.00 0.00 2.73
324 325 4.262420 GGTGACAAATTGGTGCAAGGTATT 60.262 41.667 0.00 0.00 0.00 1.89
325 326 4.923281 GTGACAAATTGGTGCAAGGTATTC 59.077 41.667 0.00 0.00 0.00 1.75
326 327 4.586421 TGACAAATTGGTGCAAGGTATTCA 59.414 37.500 0.00 0.00 0.00 2.57
327 328 5.138125 ACAAATTGGTGCAAGGTATTCAG 57.862 39.130 0.00 0.00 0.00 3.02
328 329 4.021192 ACAAATTGGTGCAAGGTATTCAGG 60.021 41.667 0.00 0.00 0.00 3.86
329 330 2.214376 TTGGTGCAAGGTATTCAGGG 57.786 50.000 0.00 0.00 0.00 4.45
330 331 1.367346 TGGTGCAAGGTATTCAGGGA 58.633 50.000 0.00 0.00 0.00 4.20
331 332 1.707989 TGGTGCAAGGTATTCAGGGAA 59.292 47.619 0.00 0.00 0.00 3.97
332 333 2.092323 GGTGCAAGGTATTCAGGGAAC 58.908 52.381 0.00 0.00 0.00 3.62
333 334 1.737793 GTGCAAGGTATTCAGGGAACG 59.262 52.381 0.00 0.00 0.00 3.95
334 335 1.349688 TGCAAGGTATTCAGGGAACGT 59.650 47.619 0.00 0.00 0.00 3.99
335 336 2.224670 TGCAAGGTATTCAGGGAACGTT 60.225 45.455 0.00 0.00 0.00 3.99
336 337 2.161609 GCAAGGTATTCAGGGAACGTTG 59.838 50.000 5.00 0.00 40.28 4.10
337 338 3.408634 CAAGGTATTCAGGGAACGTTGT 58.591 45.455 5.00 0.00 35.41 3.32
338 339 3.053831 AGGTATTCAGGGAACGTTGTG 57.946 47.619 5.00 0.00 0.00 3.33
339 340 2.635915 AGGTATTCAGGGAACGTTGTGA 59.364 45.455 5.00 2.72 0.00 3.58
340 341 3.263425 AGGTATTCAGGGAACGTTGTGAT 59.737 43.478 5.00 0.00 0.00 3.06
341 342 3.374058 GGTATTCAGGGAACGTTGTGATG 59.626 47.826 5.00 0.00 0.00 3.07
342 343 2.920724 TTCAGGGAACGTTGTGATGA 57.079 45.000 5.00 1.50 0.00 2.92
343 344 2.455674 TCAGGGAACGTTGTGATGAG 57.544 50.000 5.00 0.00 0.00 2.90
344 345 1.967779 TCAGGGAACGTTGTGATGAGA 59.032 47.619 5.00 0.00 0.00 3.27
345 346 2.367241 TCAGGGAACGTTGTGATGAGAA 59.633 45.455 5.00 0.00 0.00 2.87
346 347 3.138304 CAGGGAACGTTGTGATGAGAAA 58.862 45.455 5.00 0.00 0.00 2.52
347 348 3.058914 CAGGGAACGTTGTGATGAGAAAC 60.059 47.826 5.00 0.00 0.00 2.78
348 349 2.875933 GGGAACGTTGTGATGAGAAACA 59.124 45.455 5.00 0.00 0.00 2.83
349 350 3.058914 GGGAACGTTGTGATGAGAAACAG 60.059 47.826 5.00 0.00 0.00 3.16
350 351 3.560068 GGAACGTTGTGATGAGAAACAGT 59.440 43.478 5.00 0.00 0.00 3.55
351 352 4.748102 GGAACGTTGTGATGAGAAACAGTA 59.252 41.667 5.00 0.00 0.00 2.74
352 353 5.235616 GGAACGTTGTGATGAGAAACAGTAA 59.764 40.000 5.00 0.00 0.00 2.24
353 354 6.238266 GGAACGTTGTGATGAGAAACAGTAAA 60.238 38.462 5.00 0.00 0.00 2.01
354 355 6.287107 ACGTTGTGATGAGAAACAGTAAAG 57.713 37.500 0.00 0.00 0.00 1.85
355 356 5.815740 ACGTTGTGATGAGAAACAGTAAAGT 59.184 36.000 0.00 0.00 0.00 2.66
356 357 6.982141 ACGTTGTGATGAGAAACAGTAAAGTA 59.018 34.615 0.00 0.00 0.00 2.24
357 358 7.656137 ACGTTGTGATGAGAAACAGTAAAGTAT 59.344 33.333 0.00 0.00 0.00 2.12
358 359 8.495949 CGTTGTGATGAGAAACAGTAAAGTATT 58.504 33.333 0.00 0.00 0.00 1.89
361 362 9.778741 TGTGATGAGAAACAGTAAAGTATTTCT 57.221 29.630 0.00 0.00 42.61 2.52
375 376 9.420551 GTAAAGTATTTCTTCTATGGATACCCG 57.579 37.037 0.00 0.00 40.09 5.28
376 377 6.038997 AGTATTTCTTCTATGGATACCCGC 57.961 41.667 0.00 0.00 34.29 6.13
377 378 4.974645 ATTTCTTCTATGGATACCCGCA 57.025 40.909 0.00 0.00 34.29 5.69
378 379 4.974645 TTTCTTCTATGGATACCCGCAT 57.025 40.909 0.00 0.00 34.29 4.73
379 380 6.620877 ATTTCTTCTATGGATACCCGCATA 57.379 37.500 0.00 0.00 34.29 3.14
380 381 5.661056 TTCTTCTATGGATACCCGCATAG 57.339 43.478 0.00 0.00 34.29 2.23
381 382 4.673968 TCTTCTATGGATACCCGCATAGT 58.326 43.478 0.00 0.00 32.55 2.12
382 383 5.084519 TCTTCTATGGATACCCGCATAGTT 58.915 41.667 0.00 0.00 32.55 2.24
383 384 5.542635 TCTTCTATGGATACCCGCATAGTTT 59.457 40.000 0.00 0.00 32.55 2.66
384 385 5.401531 TCTATGGATACCCGCATAGTTTC 57.598 43.478 0.00 0.00 32.55 2.78
385 386 2.519377 TGGATACCCGCATAGTTTCG 57.481 50.000 0.00 0.00 34.29 3.46
386 387 1.758280 TGGATACCCGCATAGTTTCGT 59.242 47.619 0.00 0.00 34.29 3.85
387 388 2.132762 GGATACCCGCATAGTTTCGTG 58.867 52.381 0.00 0.00 0.00 4.35
388 389 2.223876 GGATACCCGCATAGTTTCGTGA 60.224 50.000 0.00 0.00 0.00 4.35
389 390 3.554337 GGATACCCGCATAGTTTCGTGAT 60.554 47.826 0.00 0.00 0.00 3.06
390 391 4.321452 GGATACCCGCATAGTTTCGTGATA 60.321 45.833 0.00 0.00 0.00 2.15
391 392 2.817901 ACCCGCATAGTTTCGTGATAC 58.182 47.619 0.00 0.00 0.00 2.24
392 393 2.166870 ACCCGCATAGTTTCGTGATACA 59.833 45.455 0.00 0.00 0.00 2.29
393 394 3.181469 ACCCGCATAGTTTCGTGATACAT 60.181 43.478 0.00 0.00 0.00 2.29
394 395 3.807622 CCCGCATAGTTTCGTGATACATT 59.192 43.478 0.00 0.00 0.00 2.71
395 396 4.084537 CCCGCATAGTTTCGTGATACATTC 60.085 45.833 0.00 0.00 0.00 2.67
396 397 4.745125 CCGCATAGTTTCGTGATACATTCT 59.255 41.667 0.00 0.00 0.00 2.40
397 398 5.234329 CCGCATAGTTTCGTGATACATTCTT 59.766 40.000 0.00 0.00 0.00 2.52
398 399 6.419710 CCGCATAGTTTCGTGATACATTCTTA 59.580 38.462 0.00 0.00 0.00 2.10
399 400 7.274367 CGCATAGTTTCGTGATACATTCTTAC 58.726 38.462 0.00 0.00 0.00 2.34
400 401 7.167635 CGCATAGTTTCGTGATACATTCTTACT 59.832 37.037 0.00 0.00 0.00 2.24
401 402 8.480853 GCATAGTTTCGTGATACATTCTTACTC 58.519 37.037 0.00 0.00 0.00 2.59
402 403 8.969267 CATAGTTTCGTGATACATTCTTACTCC 58.031 37.037 0.00 0.00 0.00 3.85
403 404 6.338937 AGTTTCGTGATACATTCTTACTCCC 58.661 40.000 0.00 0.00 0.00 4.30
404 405 6.154706 AGTTTCGTGATACATTCTTACTCCCT 59.845 38.462 0.00 0.00 0.00 4.20
405 406 5.769484 TCGTGATACATTCTTACTCCCTC 57.231 43.478 0.00 0.00 0.00 4.30
406 407 4.583489 TCGTGATACATTCTTACTCCCTCC 59.417 45.833 0.00 0.00 0.00 4.30
407 408 4.556898 CGTGATACATTCTTACTCCCTCCG 60.557 50.000 0.00 0.00 0.00 4.63
408 409 4.341520 GTGATACATTCTTACTCCCTCCGT 59.658 45.833 0.00 0.00 0.00 4.69
409 410 5.533903 GTGATACATTCTTACTCCCTCCGTA 59.466 44.000 0.00 0.00 0.00 4.02
410 411 6.040166 GTGATACATTCTTACTCCCTCCGTAA 59.960 42.308 0.00 0.00 0.00 3.18
411 412 6.608405 TGATACATTCTTACTCCCTCCGTAAA 59.392 38.462 0.00 0.00 0.00 2.01
412 413 5.340439 ACATTCTTACTCCCTCCGTAAAG 57.660 43.478 0.00 0.00 0.00 1.85
413 414 5.021458 ACATTCTTACTCCCTCCGTAAAGA 58.979 41.667 0.00 0.00 0.00 2.52
414 415 5.482878 ACATTCTTACTCCCTCCGTAAAGAA 59.517 40.000 0.00 0.00 0.00 2.52
415 416 6.013984 ACATTCTTACTCCCTCCGTAAAGAAA 60.014 38.462 0.00 0.00 0.00 2.52
416 417 6.616237 TTCTTACTCCCTCCGTAAAGAAAT 57.384 37.500 0.00 0.00 0.00 2.17
417 418 7.722949 TTCTTACTCCCTCCGTAAAGAAATA 57.277 36.000 0.00 0.00 0.00 1.40
418 419 7.909485 TCTTACTCCCTCCGTAAAGAAATAT 57.091 36.000 0.00 0.00 0.00 1.28
419 420 9.425248 TTCTTACTCCCTCCGTAAAGAAATATA 57.575 33.333 0.00 0.00 0.00 0.86
420 421 9.425248 TCTTACTCCCTCCGTAAAGAAATATAA 57.575 33.333 0.00 0.00 0.00 0.98
421 422 9.694137 CTTACTCCCTCCGTAAAGAAATATAAG 57.306 37.037 0.00 0.00 0.00 1.73
422 423 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
423 424 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
424 425 7.564292 ACTCCCTCCGTAAAGAAATATAAGAGT 59.436 37.037 0.00 0.00 0.00 3.24
425 426 7.723324 TCCCTCCGTAAAGAAATATAAGAGTG 58.277 38.462 0.00 0.00 0.00 3.51
426 427 7.343833 TCCCTCCGTAAAGAAATATAAGAGTGT 59.656 37.037 0.00 0.00 0.00 3.55
427 428 7.985752 CCCTCCGTAAAGAAATATAAGAGTGTT 59.014 37.037 0.00 0.00 0.00 3.32
428 429 8.818057 CCTCCGTAAAGAAATATAAGAGTGTTG 58.182 37.037 0.00 0.00 0.00 3.33
429 430 9.582431 CTCCGTAAAGAAATATAAGAGTGTTGA 57.418 33.333 0.00 0.00 0.00 3.18
463 464 9.250624 GATCATTAAAGTAGTGATCTAAACGCT 57.749 33.333 11.46 0.00 44.08 5.07
464 465 8.997621 TCATTAAAGTAGTGATCTAAACGCTT 57.002 30.769 0.00 0.00 0.00 4.68
465 466 9.431887 TCATTAAAGTAGTGATCTAAACGCTTT 57.568 29.630 0.00 3.97 34.49 3.51
494 495 8.658499 ATTTTATTTACAGAGGGATGTACGAC 57.342 34.615 0.00 0.00 35.44 4.34
495 496 6.778834 TTATTTACAGAGGGATGTACGACA 57.221 37.500 0.00 0.00 35.44 4.35
496 497 4.445452 TTTACAGAGGGATGTACGACAC 57.555 45.455 0.00 0.00 35.44 3.67
497 498 0.809385 ACAGAGGGATGTACGACACG 59.191 55.000 0.00 0.00 0.00 4.49
498 499 1.092348 CAGAGGGATGTACGACACGA 58.908 55.000 0.00 0.00 0.00 4.35
499 500 1.093159 AGAGGGATGTACGACACGAC 58.907 55.000 0.00 0.00 0.00 4.34
500 501 1.093159 GAGGGATGTACGACACGACT 58.907 55.000 0.00 0.00 0.00 4.18
501 502 1.471684 GAGGGATGTACGACACGACTT 59.528 52.381 0.00 0.00 0.00 3.01
502 503 2.679837 GAGGGATGTACGACACGACTTA 59.320 50.000 0.00 0.00 0.00 2.24
503 504 2.681848 AGGGATGTACGACACGACTTAG 59.318 50.000 0.00 0.00 0.00 2.18
504 505 2.448219 GGATGTACGACACGACTTAGC 58.552 52.381 0.00 0.00 0.00 3.09
505 506 2.159476 GGATGTACGACACGACTTAGCA 60.159 50.000 0.00 0.00 0.00 3.49
506 507 2.606717 TGTACGACACGACTTAGCAG 57.393 50.000 0.00 0.00 0.00 4.24
507 508 1.257539 GTACGACACGACTTAGCAGC 58.742 55.000 0.00 0.00 0.00 5.25
508 509 0.876399 TACGACACGACTTAGCAGCA 59.124 50.000 0.00 0.00 0.00 4.41
509 510 0.663568 ACGACACGACTTAGCAGCAC 60.664 55.000 0.00 0.00 0.00 4.40
510 511 1.665544 CGACACGACTTAGCAGCACG 61.666 60.000 0.00 0.00 0.00 5.34
511 512 0.386858 GACACGACTTAGCAGCACGA 60.387 55.000 0.00 0.00 0.00 4.35
512 513 0.387367 ACACGACTTAGCAGCACGAG 60.387 55.000 0.00 0.00 0.00 4.18
513 514 0.387367 CACGACTTAGCAGCACGAGT 60.387 55.000 0.00 0.00 0.00 4.18
514 515 1.135774 CACGACTTAGCAGCACGAGTA 60.136 52.381 0.00 0.00 0.00 2.59
515 516 1.538512 ACGACTTAGCAGCACGAGTAA 59.461 47.619 0.00 0.00 0.00 2.24
516 517 2.163815 ACGACTTAGCAGCACGAGTAAT 59.836 45.455 0.00 0.00 0.00 1.89
517 518 3.179830 CGACTTAGCAGCACGAGTAATT 58.820 45.455 0.00 0.00 0.00 1.40
518 519 3.000674 CGACTTAGCAGCACGAGTAATTG 60.001 47.826 0.00 0.00 0.00 2.32
519 520 3.262420 ACTTAGCAGCACGAGTAATTGG 58.738 45.455 0.00 0.00 0.00 3.16
520 521 1.651987 TAGCAGCACGAGTAATTGGC 58.348 50.000 0.00 0.00 0.00 4.52
521 522 1.060937 GCAGCACGAGTAATTGGCG 59.939 57.895 0.00 0.00 0.00 5.69
522 523 1.635663 GCAGCACGAGTAATTGGCGT 61.636 55.000 0.00 0.00 39.04 5.68
523 524 1.635844 CAGCACGAGTAATTGGCGTA 58.364 50.000 0.00 0.00 36.37 4.42
524 525 1.996898 CAGCACGAGTAATTGGCGTAA 59.003 47.619 0.00 0.00 36.37 3.18
525 526 2.413796 CAGCACGAGTAATTGGCGTAAA 59.586 45.455 0.00 0.00 36.37 2.01
526 527 3.068560 AGCACGAGTAATTGGCGTAAAA 58.931 40.909 0.00 0.00 36.37 1.52
527 528 3.687698 AGCACGAGTAATTGGCGTAAAAT 59.312 39.130 0.00 0.00 36.37 1.82
528 529 4.871557 AGCACGAGTAATTGGCGTAAAATA 59.128 37.500 0.00 0.00 36.37 1.40
529 530 5.526111 AGCACGAGTAATTGGCGTAAAATAT 59.474 36.000 0.00 0.00 36.37 1.28
530 531 6.037830 AGCACGAGTAATTGGCGTAAAATATT 59.962 34.615 0.00 0.00 36.37 1.28
531 532 6.689669 GCACGAGTAATTGGCGTAAAATATTT 59.310 34.615 0.00 0.00 36.37 1.40
532 533 7.097168 GCACGAGTAATTGGCGTAAAATATTTC 60.097 37.037 0.10 0.00 36.37 2.17
533 534 8.120465 CACGAGTAATTGGCGTAAAATATTTCT 58.880 33.333 0.10 0.00 36.37 2.52
534 535 8.671028 ACGAGTAATTGGCGTAAAATATTTCTT 58.329 29.630 0.10 0.00 36.37 2.52
535 536 8.943925 CGAGTAATTGGCGTAAAATATTTCTTG 58.056 33.333 0.10 0.00 0.00 3.02
571 573 3.495753 GGTCAAAATCAAAGCAAAGCAGG 59.504 43.478 0.00 0.00 0.00 4.85
587 589 6.314784 CAAAGCAGGACGAGTAAAATTAAGG 58.685 40.000 0.00 0.00 0.00 2.69
633 639 2.417787 GGGTTAGCGTCGTTAATCTGGT 60.418 50.000 11.24 0.00 0.00 4.00
754 770 0.624206 TCCCCTGCCTTCCATCATCA 60.624 55.000 0.00 0.00 0.00 3.07
770 786 6.012858 TCCATCATCAATCCTCATCATCATCA 60.013 38.462 0.00 0.00 0.00 3.07
771 787 6.659242 CCATCATCAATCCTCATCATCATCAA 59.341 38.462 0.00 0.00 0.00 2.57
867 913 2.005451 CTACAGCAAAGCTAGCCACTG 58.995 52.381 12.13 15.56 36.40 3.66
868 914 0.397941 ACAGCAAAGCTAGCCACTGA 59.602 50.000 23.03 0.00 36.40 3.41
873 919 2.419851 GCAAAGCTAGCCACTGATCTCT 60.420 50.000 12.13 0.00 0.00 3.10
874 920 3.456280 CAAAGCTAGCCACTGATCTCTC 58.544 50.000 12.13 0.00 0.00 3.20
875 921 2.754012 AGCTAGCCACTGATCTCTCT 57.246 50.000 12.13 0.00 0.00 3.10
876 922 2.586425 AGCTAGCCACTGATCTCTCTC 58.414 52.381 12.13 0.00 0.00 3.20
877 923 2.091939 AGCTAGCCACTGATCTCTCTCA 60.092 50.000 12.13 0.00 0.00 3.27
878 924 2.034558 GCTAGCCACTGATCTCTCTCAC 59.965 54.545 2.29 0.00 0.00 3.51
879 925 2.530460 AGCCACTGATCTCTCTCACT 57.470 50.000 0.00 0.00 0.00 3.41
880 926 2.378038 AGCCACTGATCTCTCTCACTC 58.622 52.381 0.00 0.00 0.00 3.51
881 927 1.408702 GCCACTGATCTCTCTCACTCC 59.591 57.143 0.00 0.00 0.00 3.85
882 928 2.949963 GCCACTGATCTCTCTCACTCCT 60.950 54.545 0.00 0.00 0.00 3.69
883 929 2.951642 CCACTGATCTCTCTCACTCCTC 59.048 54.545 0.00 0.00 0.00 3.71
884 930 3.371917 CCACTGATCTCTCTCACTCCTCT 60.372 52.174 0.00 0.00 0.00 3.69
885 931 3.879295 CACTGATCTCTCTCACTCCTCTC 59.121 52.174 0.00 0.00 0.00 3.20
957 1003 5.178252 CGTCTCATCATTTGATCACCCATAC 59.822 44.000 0.00 0.00 32.72 2.39
1007 1057 1.739929 CTGTTGTGGCGATGGCGTA 60.740 57.895 0.00 0.00 41.24 4.42
1008 1058 1.966493 CTGTTGTGGCGATGGCGTAC 61.966 60.000 0.00 0.00 41.24 3.67
1021 1071 4.944372 CGTACGATCAGCGGGGGC 62.944 72.222 10.44 0.00 46.49 5.80
1035 1085 3.535962 GGGCTGAGAGGCGAGGAG 61.536 72.222 0.00 0.00 42.43 3.69
1036 1086 3.535962 GGCTGAGAGGCGAGGAGG 61.536 72.222 0.00 0.00 0.00 4.30
1125 1175 2.230940 CCTCGCCAACTACATCGCG 61.231 63.158 0.00 0.00 45.76 5.87
1830 1883 2.203394 CAGCACCACCAACAGGCT 60.203 61.111 0.00 0.00 34.64 4.58
1889 1942 3.827898 CGACCAGACCTCGCTCCC 61.828 72.222 0.00 0.00 0.00 4.30
2030 2083 0.246635 CTCAACTACCGGTGACCTGG 59.753 60.000 19.93 10.28 0.00 4.45
2100 2153 2.069273 CTTAGCGCTCCAATAATCCCG 58.931 52.381 16.34 0.00 0.00 5.14
2109 2162 3.643792 CTCCAATAATCCCGTCTCCTCTT 59.356 47.826 0.00 0.00 0.00 2.85
2111 2164 3.244249 CCAATAATCCCGTCTCCTCTTCC 60.244 52.174 0.00 0.00 0.00 3.46
2181 2245 7.466805 TCAGTATGTGTACTACGTGTAATGTC 58.533 38.462 0.00 0.00 39.12 3.06
2182 2246 6.410048 CAGTATGTGTACTACGTGTAATGTCG 59.590 42.308 0.00 0.00 39.12 4.35
2183 2247 4.747540 TGTGTACTACGTGTAATGTCGT 57.252 40.909 0.00 0.00 42.82 4.34
2307 2382 2.851824 GGCCGCAATAAAACTTGAATCG 59.148 45.455 0.00 0.00 0.00 3.34
2309 2384 4.162812 GCCGCAATAAAACTTGAATCGAA 58.837 39.130 0.00 0.00 0.00 3.71
2321 2396 2.291365 TGAATCGAACATGCATCCCTG 58.709 47.619 0.00 0.00 0.00 4.45
2333 2444 3.023949 ATCCCTGACGAGGCTGTGC 62.024 63.158 0.00 0.00 38.17 4.57
2337 2448 1.364626 CCTGACGAGGCTGTGCAATC 61.365 60.000 0.00 0.00 30.52 2.67
2338 2449 1.690283 CTGACGAGGCTGTGCAATCG 61.690 60.000 12.49 12.49 42.23 3.34
2349 2460 4.521943 GCTGTGCAATCGATTAATCTGTC 58.478 43.478 10.97 3.24 0.00 3.51
2361 2472 7.969314 TCGATTAATCTGTCGAGAGAGATATG 58.031 38.462 17.98 6.34 40.10 1.78
2368 2479 9.508642 AATCTGTCGAGAGAGATATGTAATGTA 57.491 33.333 17.98 0.00 40.10 2.29
2369 2480 8.904099 TCTGTCGAGAGAGATATGTAATGTAA 57.096 34.615 8.43 0.00 43.49 2.41
2370 2481 8.775527 TCTGTCGAGAGAGATATGTAATGTAAC 58.224 37.037 8.43 0.00 43.49 2.50
2371 2482 7.872881 TGTCGAGAGAGATATGTAATGTAACC 58.127 38.462 0.00 0.00 43.49 2.85
2372 2483 7.720074 TGTCGAGAGAGATATGTAATGTAACCT 59.280 37.037 0.00 0.00 43.49 3.50
2373 2484 8.569641 GTCGAGAGAGATATGTAATGTAACCTT 58.430 37.037 0.00 0.00 43.49 3.50
2374 2485 8.784994 TCGAGAGAGATATGTAATGTAACCTTC 58.215 37.037 0.00 0.00 34.84 3.46
2501 2631 1.202830 ACCGGCCACAGTTTTGTATCA 60.203 47.619 0.00 0.00 35.25 2.15
2502 2632 1.199097 CCGGCCACAGTTTTGTATCAC 59.801 52.381 2.24 0.00 35.25 3.06
2505 2635 3.609175 CGGCCACAGTTTTGTATCACAAG 60.609 47.826 2.24 0.00 39.53 3.16
2514 2644 9.512653 ACAGTTTTGTATCACAAGCCATTTGCT 62.513 37.037 0.00 0.00 44.49 3.91
2532 2662 3.473166 CGATCGATCGCATGCCCG 61.473 66.667 32.34 13.35 43.84 6.13
2599 2731 9.357161 GAGTCACCTTCCTCTAATCTAATCTAA 57.643 37.037 0.00 0.00 0.00 2.10
2600 2732 9.890915 AGTCACCTTCCTCTAATCTAATCTAAT 57.109 33.333 0.00 0.00 0.00 1.73
2712 2852 5.827267 TCTTTGTGTTTGTCTTGATGATGGA 59.173 36.000 0.00 0.00 0.00 3.41
2716 2856 4.999950 GTGTTTGTCTTGATGATGGAGAGT 59.000 41.667 0.00 0.00 0.00 3.24
2718 2858 3.257469 TGTCTTGATGATGGAGAGTGC 57.743 47.619 0.00 0.00 0.00 4.40
2723 2863 1.911357 TGATGATGGAGAGTGCCACTT 59.089 47.619 0.00 0.00 41.56 3.16
2725 2865 3.118629 TGATGATGGAGAGTGCCACTTAC 60.119 47.826 0.00 0.00 41.56 2.34
2727 2868 2.234661 TGATGGAGAGTGCCACTTACAG 59.765 50.000 0.00 0.00 41.56 2.74
2729 2870 2.884320 TGGAGAGTGCCACTTACAGTA 58.116 47.619 0.00 0.00 31.66 2.74
2733 2874 2.299297 AGAGTGCCACTTACAGTACCAC 59.701 50.000 0.00 0.00 32.14 4.16
2734 2875 1.346722 AGTGCCACTTACAGTACCACC 59.653 52.381 0.00 0.00 32.28 4.61
2737 2878 1.403780 GCCACTTACAGTACCACCGAG 60.404 57.143 0.00 0.00 0.00 4.63
2738 2879 1.203994 CCACTTACAGTACCACCGAGG 59.796 57.143 0.00 0.00 45.67 4.63
2741 2882 2.560105 ACTTACAGTACCACCGAGGAAC 59.440 50.000 0.00 0.00 41.22 3.62
2743 2884 1.640917 ACAGTACCACCGAGGAACAT 58.359 50.000 0.00 0.00 41.22 2.71
2750 2891 1.001520 CCACCGAGGAACATACACACA 59.998 52.381 0.00 0.00 41.22 3.72
2760 2901 7.435068 AGGAACATACACACACAGAATTAAC 57.565 36.000 0.00 0.00 0.00 2.01
2762 2903 6.205853 GGAACATACACACACAGAATTAACCA 59.794 38.462 0.00 0.00 0.00 3.67
2843 3008 1.930503 CCACGCGTATGATTAGCAACA 59.069 47.619 13.44 0.00 0.00 3.33
2850 3016 4.434989 GCGTATGATTAGCAACAACAACGA 60.435 41.667 0.00 0.00 0.00 3.85
2889 3060 1.502231 CGGAAAGGATGTAGCATCCG 58.498 55.000 18.89 7.84 42.87 4.18
2901 3072 2.094762 AGCATCCGTCGCTTTAGTTT 57.905 45.000 0.00 0.00 35.82 2.66
2902 3073 2.423577 AGCATCCGTCGCTTTAGTTTT 58.576 42.857 0.00 0.00 35.82 2.43
2903 3074 3.592059 AGCATCCGTCGCTTTAGTTTTA 58.408 40.909 0.00 0.00 35.82 1.52
2904 3075 4.189231 AGCATCCGTCGCTTTAGTTTTAT 58.811 39.130 0.00 0.00 35.82 1.40
2993 3164 4.093514 GTTTTCTCACACGTATCGATCGA 58.906 43.478 21.86 21.86 0.00 3.59
2996 3167 2.479275 TCTCACACGTATCGATCGATCC 59.521 50.000 32.50 21.44 36.17 3.36
2997 3168 1.534163 TCACACGTATCGATCGATCCC 59.466 52.381 32.50 22.28 36.17 3.85
2998 3169 0.879765 ACACGTATCGATCGATCCCC 59.120 55.000 32.50 19.98 36.17 4.81
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.324091 GGGAACGGAGGGAGTAGTCA 60.324 60.000 0.00 0.00 0.00 3.41
1 2 0.324091 TGGGAACGGAGGGAGTAGTC 60.324 60.000 0.00 0.00 0.00 2.59
2 3 0.115745 TTGGGAACGGAGGGAGTAGT 59.884 55.000 0.00 0.00 0.00 2.73
3 4 1.272807 TTTGGGAACGGAGGGAGTAG 58.727 55.000 0.00 0.00 0.00 2.57
4 5 1.961133 ATTTGGGAACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
5 6 1.961133 TATTTGGGAACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
6 7 3.577805 ATTATTTGGGAACGGAGGGAG 57.422 47.619 0.00 0.00 0.00 4.30
7 8 3.010808 ACAATTATTTGGGAACGGAGGGA 59.989 43.478 2.66 0.00 37.15 4.20
8 9 3.361786 ACAATTATTTGGGAACGGAGGG 58.638 45.455 2.66 0.00 37.15 4.30
9 10 4.270008 AGACAATTATTTGGGAACGGAGG 58.730 43.478 2.66 0.00 37.15 4.30
10 11 5.897377 AAGACAATTATTTGGGAACGGAG 57.103 39.130 2.66 0.00 37.15 4.63
11 12 6.007703 AGAAAGACAATTATTTGGGAACGGA 58.992 36.000 2.66 0.00 37.15 4.69
12 13 6.267496 AGAAAGACAATTATTTGGGAACGG 57.733 37.500 2.66 0.00 37.15 4.44
13 14 6.967199 GCTAGAAAGACAATTATTTGGGAACG 59.033 38.462 0.00 0.00 37.15 3.95
14 15 7.093945 TGGCTAGAAAGACAATTATTTGGGAAC 60.094 37.037 0.00 0.00 38.01 3.62
15 16 6.951198 TGGCTAGAAAGACAATTATTTGGGAA 59.049 34.615 0.00 0.00 38.01 3.97
16 17 6.489603 TGGCTAGAAAGACAATTATTTGGGA 58.510 36.000 0.00 0.00 38.01 4.37
17 18 6.773976 TGGCTAGAAAGACAATTATTTGGG 57.226 37.500 0.00 0.00 38.01 4.12
18 19 8.230472 AGATGGCTAGAAAGACAATTATTTGG 57.770 34.615 0.00 0.00 46.32 3.28
19 20 8.896744 TGAGATGGCTAGAAAGACAATTATTTG 58.103 33.333 0.00 0.00 46.32 2.32
20 21 9.466497 TTGAGATGGCTAGAAAGACAATTATTT 57.534 29.630 0.00 0.00 46.32 1.40
21 22 9.466497 TTTGAGATGGCTAGAAAGACAATTATT 57.534 29.630 0.00 0.00 46.32 1.40
22 23 9.638176 ATTTGAGATGGCTAGAAAGACAATTAT 57.362 29.630 0.00 0.00 46.32 1.28
23 24 8.896744 CATTTGAGATGGCTAGAAAGACAATTA 58.103 33.333 0.00 0.00 46.32 1.40
24 25 7.147949 CCATTTGAGATGGCTAGAAAGACAATT 60.148 37.037 0.00 0.00 46.32 2.32
25 26 6.320672 CCATTTGAGATGGCTAGAAAGACAAT 59.679 38.462 0.00 0.00 46.32 2.71
26 27 5.649395 CCATTTGAGATGGCTAGAAAGACAA 59.351 40.000 0.00 0.00 46.32 3.18
28 29 5.295540 GTCCATTTGAGATGGCTAGAAAGAC 59.704 44.000 0.00 0.00 39.01 3.01
29 30 5.190528 AGTCCATTTGAGATGGCTAGAAAGA 59.809 40.000 0.00 0.00 39.01 2.52
30 31 5.435291 AGTCCATTTGAGATGGCTAGAAAG 58.565 41.667 0.00 0.00 39.01 2.62
31 32 5.441718 AGTCCATTTGAGATGGCTAGAAA 57.558 39.130 0.00 0.00 39.01 2.52
32 33 5.425217 TGTAGTCCATTTGAGATGGCTAGAA 59.575 40.000 0.00 0.00 39.01 2.10
33 34 4.962362 TGTAGTCCATTTGAGATGGCTAGA 59.038 41.667 0.00 0.00 39.01 2.43
34 35 5.282055 TGTAGTCCATTTGAGATGGCTAG 57.718 43.478 0.00 0.00 39.01 3.42
35 36 5.045942 TGTTGTAGTCCATTTGAGATGGCTA 60.046 40.000 0.00 0.33 39.01 3.93
36 37 4.263462 TGTTGTAGTCCATTTGAGATGGCT 60.263 41.667 0.00 1.24 39.01 4.75
37 38 4.009675 TGTTGTAGTCCATTTGAGATGGC 58.990 43.478 0.00 0.00 39.01 4.40
38 39 6.018751 CGTATGTTGTAGTCCATTTGAGATGG 60.019 42.308 0.00 0.00 40.48 3.51
39 40 6.018751 CCGTATGTTGTAGTCCATTTGAGATG 60.019 42.308 0.00 0.00 0.00 2.90
40 41 6.049149 CCGTATGTTGTAGTCCATTTGAGAT 58.951 40.000 0.00 0.00 0.00 2.75
41 42 5.186215 TCCGTATGTTGTAGTCCATTTGAGA 59.814 40.000 0.00 0.00 0.00 3.27
42 43 5.416083 TCCGTATGTTGTAGTCCATTTGAG 58.584 41.667 0.00 0.00 0.00 3.02
43 44 5.408880 TCCGTATGTTGTAGTCCATTTGA 57.591 39.130 0.00 0.00 0.00 2.69
44 45 5.584649 ACATCCGTATGTTGTAGTCCATTTG 59.415 40.000 0.00 0.00 44.07 2.32
45 46 5.741011 ACATCCGTATGTTGTAGTCCATTT 58.259 37.500 0.00 0.00 44.07 2.32
46 47 5.353394 ACATCCGTATGTTGTAGTCCATT 57.647 39.130 0.00 0.00 44.07 3.16
47 48 6.665992 ATACATCCGTATGTTGTAGTCCAT 57.334 37.500 0.00 0.00 44.07 3.41
48 49 7.770366 ATATACATCCGTATGTTGTAGTCCA 57.230 36.000 0.00 0.00 44.07 4.02
49 50 9.170734 TCTATATACATCCGTATGTTGTAGTCC 57.829 37.037 0.00 0.00 44.07 3.85
50 51 9.985318 GTCTATATACATCCGTATGTTGTAGTC 57.015 37.037 0.00 0.00 44.07 2.59
51 52 9.511272 TGTCTATATACATCCGTATGTTGTAGT 57.489 33.333 0.00 0.00 44.07 2.73
54 55 8.803235 ACATGTCTATATACATCCGTATGTTGT 58.197 33.333 0.00 0.00 44.07 3.32
55 56 9.639601 AACATGTCTATATACATCCGTATGTTG 57.360 33.333 0.00 0.00 44.07 3.33
72 73 9.856488 GTGAATCTACACTCTAAAACATGTCTA 57.144 33.333 0.00 0.00 37.73 2.59
73 74 8.589338 AGTGAATCTACACTCTAAAACATGTCT 58.411 33.333 0.00 0.00 46.36 3.41
74 75 8.764524 AGTGAATCTACACTCTAAAACATGTC 57.235 34.615 0.00 0.00 46.36 3.06
87 88 5.446473 CGGAGCAAATTGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
88 89 4.631377 CGGAGCAAATTGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
89 90 4.631813 ACGGAGCAAATTGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
90 91 4.832248 ACGGAGCAAATTGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
91 92 3.679389 ACGGAGCAAATTGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
92 93 5.065218 ACATACGGAGCAAATTGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
93 94 4.943705 ACATACGGAGCAAATTGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
94 95 4.323417 ACATACGGAGCAAATTGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
95 96 3.937814 ACATACGGAGCAAATTGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
96 97 4.870426 ACTACATACGGAGCAAATTGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
97 98 5.086104 ACTACATACGGAGCAAATTGAGT 57.914 39.130 0.00 0.00 0.00 3.41
98 99 5.005779 GTGACTACATACGGAGCAAATTGAG 59.994 44.000 0.00 0.00 0.00 3.02
99 100 4.868171 GTGACTACATACGGAGCAAATTGA 59.132 41.667 0.00 0.00 0.00 2.57
100 101 4.870426 AGTGACTACATACGGAGCAAATTG 59.130 41.667 0.00 0.00 0.00 2.32
101 102 5.086104 AGTGACTACATACGGAGCAAATT 57.914 39.130 0.00 0.00 0.00 1.82
102 103 4.737855 AGTGACTACATACGGAGCAAAT 57.262 40.909 0.00 0.00 0.00 2.32
103 104 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
104 105 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
105 106 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
106 107 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
107 108 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
108 109 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
109 110 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
110 111 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
111 112 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
113 114 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
114 115 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
115 116 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
116 117 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
117 118 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
118 119 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
119 120 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
120 121 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
121 122 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
134 135 9.595823 CCGTTCCTAAATAATTGTCTTTCTAGA 57.404 33.333 0.00 0.00 0.00 2.43
135 136 9.595823 TCCGTTCCTAAATAATTGTCTTTCTAG 57.404 33.333 0.00 0.00 0.00 2.43
136 137 9.595823 CTCCGTTCCTAAATAATTGTCTTTCTA 57.404 33.333 0.00 0.00 0.00 2.10
137 138 7.553044 CCTCCGTTCCTAAATAATTGTCTTTCT 59.447 37.037 0.00 0.00 0.00 2.52
138 139 7.201705 CCCTCCGTTCCTAAATAATTGTCTTTC 60.202 40.741 0.00 0.00 0.00 2.62
139 140 6.602009 CCCTCCGTTCCTAAATAATTGTCTTT 59.398 38.462 0.00 0.00 0.00 2.52
140 141 6.069847 TCCCTCCGTTCCTAAATAATTGTCTT 60.070 38.462 0.00 0.00 0.00 3.01
141 142 5.427481 TCCCTCCGTTCCTAAATAATTGTCT 59.573 40.000 0.00 0.00 0.00 3.41
142 143 5.677567 TCCCTCCGTTCCTAAATAATTGTC 58.322 41.667 0.00 0.00 0.00 3.18
143 144 5.191124 ACTCCCTCCGTTCCTAAATAATTGT 59.809 40.000 0.00 0.00 0.00 2.71
144 145 5.681639 ACTCCCTCCGTTCCTAAATAATTG 58.318 41.667 0.00 0.00 0.00 2.32
145 146 5.970501 ACTCCCTCCGTTCCTAAATAATT 57.029 39.130 0.00 0.00 0.00 1.40
146 147 5.901276 TGTACTCCCTCCGTTCCTAAATAAT 59.099 40.000 0.00 0.00 0.00 1.28
147 148 5.271598 TGTACTCCCTCCGTTCCTAAATAA 58.728 41.667 0.00 0.00 0.00 1.40
148 149 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
149 150 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
150 151 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
151 152 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
152 153 4.404640 CATATGTACTCCCTCCGTTCCTA 58.595 47.826 0.00 0.00 0.00 2.94
153 154 3.231818 CATATGTACTCCCTCCGTTCCT 58.768 50.000 0.00 0.00 0.00 3.36
154 155 2.299297 CCATATGTACTCCCTCCGTTCC 59.701 54.545 1.24 0.00 0.00 3.62
155 156 3.228453 TCCATATGTACTCCCTCCGTTC 58.772 50.000 1.24 0.00 0.00 3.95
156 157 3.117246 TCTCCATATGTACTCCCTCCGTT 60.117 47.826 1.24 0.00 0.00 4.44
157 158 2.445905 TCTCCATATGTACTCCCTCCGT 59.554 50.000 1.24 0.00 0.00 4.69
158 159 3.156288 TCTCCATATGTACTCCCTCCG 57.844 52.381 1.24 0.00 0.00 4.63
159 160 5.148502 TCTTTCTCCATATGTACTCCCTCC 58.851 45.833 1.24 0.00 0.00 4.30
160 161 6.495181 TCATCTTTCTCCATATGTACTCCCTC 59.505 42.308 1.24 0.00 0.00 4.30
161 162 6.385443 TCATCTTTCTCCATATGTACTCCCT 58.615 40.000 1.24 0.00 0.00 4.20
162 163 6.672266 TCATCTTTCTCCATATGTACTCCC 57.328 41.667 1.24 0.00 0.00 4.30
163 164 8.370940 TCATTCATCTTTCTCCATATGTACTCC 58.629 37.037 1.24 0.00 0.00 3.85
164 165 9.770097 TTCATTCATCTTTCTCCATATGTACTC 57.230 33.333 1.24 0.00 0.00 2.59
171 172 9.770097 GTGTAGATTCATTCATCTTTCTCCATA 57.230 33.333 0.00 0.00 35.08 2.74
172 173 8.492782 AGTGTAGATTCATTCATCTTTCTCCAT 58.507 33.333 0.00 0.00 35.08 3.41
173 174 7.855375 AGTGTAGATTCATTCATCTTTCTCCA 58.145 34.615 0.00 0.00 35.08 3.86
174 175 8.203485 AGAGTGTAGATTCATTCATCTTTCTCC 58.797 37.037 0.00 0.00 35.08 3.71
253 254 9.453830 ACTCCCTCAGTTCCTAAATATTTATCT 57.546 33.333 8.34 3.33 26.56 1.98
256 257 9.725206 AGTACTCCCTCAGTTCCTAAATATTTA 57.275 33.333 7.66 7.66 36.43 1.40
257 258 8.625467 AGTACTCCCTCAGTTCCTAAATATTT 57.375 34.615 5.89 5.89 36.43 1.40
258 259 9.900112 ATAGTACTCCCTCAGTTCCTAAATATT 57.100 33.333 0.00 0.00 36.43 1.28
259 260 9.900112 AATAGTACTCCCTCAGTTCCTAAATAT 57.100 33.333 0.00 0.00 36.43 1.28
260 261 9.144298 CAATAGTACTCCCTCAGTTCCTAAATA 57.856 37.037 0.00 0.00 36.43 1.40
261 262 7.624077 ACAATAGTACTCCCTCAGTTCCTAAAT 59.376 37.037 0.00 0.00 36.43 1.40
262 263 6.958192 ACAATAGTACTCCCTCAGTTCCTAAA 59.042 38.462 0.00 0.00 36.43 1.85
263 264 6.500336 ACAATAGTACTCCCTCAGTTCCTAA 58.500 40.000 0.00 0.00 36.43 2.69
264 265 6.088541 ACAATAGTACTCCCTCAGTTCCTA 57.911 41.667 0.00 0.00 36.43 2.94
265 266 4.949121 ACAATAGTACTCCCTCAGTTCCT 58.051 43.478 0.00 0.00 36.43 3.36
266 267 5.892686 ACTACAATAGTACTCCCTCAGTTCC 59.107 44.000 0.00 0.00 37.23 3.62
267 268 8.694581 ATACTACAATAGTACTCCCTCAGTTC 57.305 38.462 0.00 0.00 43.46 3.01
269 270 9.742144 CATATACTACAATAGTACTCCCTCAGT 57.258 37.037 0.00 1.67 43.46 3.41
270 271 8.679100 GCATATACTACAATAGTACTCCCTCAG 58.321 40.741 0.00 0.00 43.46 3.35
271 272 7.614583 GGCATATACTACAATAGTACTCCCTCA 59.385 40.741 0.00 0.00 43.46 3.86
272 273 7.614583 TGGCATATACTACAATAGTACTCCCTC 59.385 40.741 0.00 0.00 43.46 4.30
273 274 7.476153 TGGCATATACTACAATAGTACTCCCT 58.524 38.462 0.00 0.00 43.46 4.20
274 275 7.713734 TGGCATATACTACAATAGTACTCCC 57.286 40.000 0.00 0.00 43.46 4.30
275 276 9.587772 CAATGGCATATACTACAATAGTACTCC 57.412 37.037 0.00 0.00 43.46 3.85
276 277 9.587772 CCAATGGCATATACTACAATAGTACTC 57.412 37.037 0.00 0.00 43.46 2.59
277 278 9.101325 ACCAATGGCATATACTACAATAGTACT 57.899 33.333 0.00 0.00 43.46 2.73
278 279 9.151471 CACCAATGGCATATACTACAATAGTAC 57.849 37.037 0.00 0.00 43.46 2.73
279 280 9.095700 TCACCAATGGCATATACTACAATAGTA 57.904 33.333 0.00 0.00 44.64 1.82
280 281 7.878127 GTCACCAATGGCATATACTACAATAGT 59.122 37.037 0.00 0.00 42.68 2.12
281 282 7.877612 TGTCACCAATGGCATATACTACAATAG 59.122 37.037 0.00 0.00 34.80 1.73
282 283 7.740805 TGTCACCAATGGCATATACTACAATA 58.259 34.615 0.00 0.00 34.80 1.90
283 284 6.600388 TGTCACCAATGGCATATACTACAAT 58.400 36.000 0.00 0.00 34.80 2.71
284 285 5.995446 TGTCACCAATGGCATATACTACAA 58.005 37.500 0.00 0.00 34.80 2.41
285 286 5.622346 TGTCACCAATGGCATATACTACA 57.378 39.130 0.00 0.47 34.80 2.74
286 287 6.935741 TTTGTCACCAATGGCATATACTAC 57.064 37.500 0.00 0.00 41.03 2.73
287 288 7.014134 CCAATTTGTCACCAATGGCATATACTA 59.986 37.037 0.00 0.00 41.03 1.82
288 289 6.183360 CCAATTTGTCACCAATGGCATATACT 60.183 38.462 0.00 0.00 41.03 2.12
289 290 5.984926 CCAATTTGTCACCAATGGCATATAC 59.015 40.000 0.00 0.00 41.03 1.47
290 291 5.660417 ACCAATTTGTCACCAATGGCATATA 59.340 36.000 0.00 0.00 41.03 0.86
291 292 4.470664 ACCAATTTGTCACCAATGGCATAT 59.529 37.500 0.00 0.00 41.03 1.78
292 293 3.837146 ACCAATTTGTCACCAATGGCATA 59.163 39.130 0.00 0.00 41.03 3.14
293 294 2.638855 ACCAATTTGTCACCAATGGCAT 59.361 40.909 0.00 0.00 41.03 4.40
294 295 2.045524 ACCAATTTGTCACCAATGGCA 58.954 42.857 0.00 0.00 39.18 4.92
295 296 2.415776 CACCAATTTGTCACCAATGGC 58.584 47.619 0.00 0.00 35.13 4.40
296 297 2.224233 TGCACCAATTTGTCACCAATGG 60.224 45.455 0.00 0.00 36.96 3.16
297 298 3.109044 TGCACCAATTTGTCACCAATG 57.891 42.857 0.00 0.00 0.00 2.82
298 299 3.494749 CCTTGCACCAATTTGTCACCAAT 60.495 43.478 0.00 0.00 0.00 3.16
299 300 2.158986 CCTTGCACCAATTTGTCACCAA 60.159 45.455 0.00 0.00 0.00 3.67
300 301 1.411977 CCTTGCACCAATTTGTCACCA 59.588 47.619 0.00 0.00 0.00 4.17
301 302 1.412343 ACCTTGCACCAATTTGTCACC 59.588 47.619 0.00 0.00 0.00 4.02
302 303 2.888834 ACCTTGCACCAATTTGTCAC 57.111 45.000 0.00 0.00 0.00 3.67
303 304 4.586421 TGAATACCTTGCACCAATTTGTCA 59.414 37.500 0.00 0.00 0.00 3.58
304 305 5.132897 TGAATACCTTGCACCAATTTGTC 57.867 39.130 0.00 0.00 0.00 3.18
305 306 4.021192 CCTGAATACCTTGCACCAATTTGT 60.021 41.667 0.00 0.00 0.00 2.83
306 307 4.497300 CCTGAATACCTTGCACCAATTTG 58.503 43.478 0.00 0.00 0.00 2.32
307 308 3.515104 CCCTGAATACCTTGCACCAATTT 59.485 43.478 0.00 0.00 0.00 1.82
308 309 3.099141 CCCTGAATACCTTGCACCAATT 58.901 45.455 0.00 0.00 0.00 2.32
309 310 2.311542 TCCCTGAATACCTTGCACCAAT 59.688 45.455 0.00 0.00 0.00 3.16
310 311 1.707989 TCCCTGAATACCTTGCACCAA 59.292 47.619 0.00 0.00 0.00 3.67
311 312 1.367346 TCCCTGAATACCTTGCACCA 58.633 50.000 0.00 0.00 0.00 4.17
312 313 2.092323 GTTCCCTGAATACCTTGCACC 58.908 52.381 0.00 0.00 0.00 5.01
313 314 1.737793 CGTTCCCTGAATACCTTGCAC 59.262 52.381 0.00 0.00 0.00 4.57
314 315 1.349688 ACGTTCCCTGAATACCTTGCA 59.650 47.619 0.00 0.00 0.00 4.08
315 316 2.109425 ACGTTCCCTGAATACCTTGC 57.891 50.000 0.00 0.00 0.00 4.01
316 317 3.188460 CACAACGTTCCCTGAATACCTTG 59.812 47.826 0.00 0.00 0.00 3.61
317 318 3.071892 TCACAACGTTCCCTGAATACCTT 59.928 43.478 0.00 0.00 0.00 3.50
318 319 2.635915 TCACAACGTTCCCTGAATACCT 59.364 45.455 0.00 0.00 0.00 3.08
319 320 3.048337 TCACAACGTTCCCTGAATACC 57.952 47.619 0.00 0.00 0.00 2.73
320 321 4.250464 TCATCACAACGTTCCCTGAATAC 58.750 43.478 0.00 0.00 0.00 1.89
321 322 4.221924 TCTCATCACAACGTTCCCTGAATA 59.778 41.667 0.00 0.00 0.00 1.75
322 323 3.007940 TCTCATCACAACGTTCCCTGAAT 59.992 43.478 0.00 0.00 0.00 2.57
323 324 2.367241 TCTCATCACAACGTTCCCTGAA 59.633 45.455 0.00 0.00 0.00 3.02
324 325 1.967779 TCTCATCACAACGTTCCCTGA 59.032 47.619 0.00 0.00 0.00 3.86
325 326 2.455674 TCTCATCACAACGTTCCCTG 57.544 50.000 0.00 0.00 0.00 4.45
326 327 3.139077 GTTTCTCATCACAACGTTCCCT 58.861 45.455 0.00 0.00 0.00 4.20
327 328 2.875933 TGTTTCTCATCACAACGTTCCC 59.124 45.455 0.00 0.00 0.00 3.97
328 329 3.560068 ACTGTTTCTCATCACAACGTTCC 59.440 43.478 0.00 0.00 0.00 3.62
329 330 4.795970 ACTGTTTCTCATCACAACGTTC 57.204 40.909 0.00 0.00 0.00 3.95
330 331 6.315393 ACTTTACTGTTTCTCATCACAACGTT 59.685 34.615 0.00 0.00 0.00 3.99
331 332 5.815740 ACTTTACTGTTTCTCATCACAACGT 59.184 36.000 0.00 0.00 0.00 3.99
332 333 6.287107 ACTTTACTGTTTCTCATCACAACG 57.713 37.500 0.00 0.00 0.00 4.10
335 336 9.778741 AGAAATACTTTACTGTTTCTCATCACA 57.221 29.630 0.00 0.00 36.48 3.58
349 350 9.420551 CGGGTATCCATAGAAGAAATACTTTAC 57.579 37.037 0.00 0.00 39.13 2.01
350 351 8.092687 GCGGGTATCCATAGAAGAAATACTTTA 58.907 37.037 0.00 0.00 39.13 1.85
351 352 6.935208 GCGGGTATCCATAGAAGAAATACTTT 59.065 38.462 0.00 0.00 39.13 2.66
352 353 6.042781 TGCGGGTATCCATAGAAGAAATACTT 59.957 38.462 0.00 0.00 42.03 2.24
353 354 5.542635 TGCGGGTATCCATAGAAGAAATACT 59.457 40.000 0.00 0.00 0.00 2.12
354 355 5.790593 TGCGGGTATCCATAGAAGAAATAC 58.209 41.667 0.00 0.00 0.00 1.89
355 356 6.620877 ATGCGGGTATCCATAGAAGAAATA 57.379 37.500 0.00 0.00 0.00 1.40
356 357 4.974645 TGCGGGTATCCATAGAAGAAAT 57.025 40.909 0.00 0.00 0.00 2.17
357 358 4.974645 ATGCGGGTATCCATAGAAGAAA 57.025 40.909 0.00 0.00 0.00 2.52
358 359 5.084519 ACTATGCGGGTATCCATAGAAGAA 58.915 41.667 12.94 0.00 42.08 2.52
359 360 4.673968 ACTATGCGGGTATCCATAGAAGA 58.326 43.478 12.94 0.00 42.08 2.87
360 361 5.407407 AACTATGCGGGTATCCATAGAAG 57.593 43.478 12.94 0.00 42.08 2.85
361 362 5.566032 CGAAACTATGCGGGTATCCATAGAA 60.566 44.000 12.94 0.00 42.08 2.10
362 363 4.082408 CGAAACTATGCGGGTATCCATAGA 60.082 45.833 12.94 0.00 42.08 1.98
363 364 4.174009 CGAAACTATGCGGGTATCCATAG 58.826 47.826 0.00 6.20 44.01 2.23
364 365 3.575256 ACGAAACTATGCGGGTATCCATA 59.425 43.478 0.00 0.00 0.00 2.74
365 366 2.367567 ACGAAACTATGCGGGTATCCAT 59.632 45.455 0.00 0.00 0.00 3.41
366 367 1.758280 ACGAAACTATGCGGGTATCCA 59.242 47.619 0.00 0.00 0.00 3.41
367 368 2.132762 CACGAAACTATGCGGGTATCC 58.867 52.381 0.00 0.00 0.00 2.59
368 369 3.088194 TCACGAAACTATGCGGGTATC 57.912 47.619 0.00 0.00 31.76 2.24
369 370 3.746045 ATCACGAAACTATGCGGGTAT 57.254 42.857 0.00 0.00 31.76 2.73
370 371 3.380954 TGTATCACGAAACTATGCGGGTA 59.619 43.478 0.00 0.00 31.76 3.69
371 372 2.166870 TGTATCACGAAACTATGCGGGT 59.833 45.455 0.00 0.00 31.76 5.28
372 373 2.816689 TGTATCACGAAACTATGCGGG 58.183 47.619 0.00 0.00 0.00 6.13
373 374 4.745125 AGAATGTATCACGAAACTATGCGG 59.255 41.667 0.00 0.00 0.00 5.69
374 375 5.890110 AGAATGTATCACGAAACTATGCG 57.110 39.130 0.00 0.00 0.00 4.73
375 376 8.354011 AGTAAGAATGTATCACGAAACTATGC 57.646 34.615 0.00 0.00 0.00 3.14
376 377 8.969267 GGAGTAAGAATGTATCACGAAACTATG 58.031 37.037 0.00 0.00 0.00 2.23
377 378 8.142551 GGGAGTAAGAATGTATCACGAAACTAT 58.857 37.037 0.00 0.00 0.00 2.12
378 379 7.341256 AGGGAGTAAGAATGTATCACGAAACTA 59.659 37.037 0.00 0.00 0.00 2.24
379 380 6.154706 AGGGAGTAAGAATGTATCACGAAACT 59.845 38.462 0.00 0.00 0.00 2.66
380 381 6.338937 AGGGAGTAAGAATGTATCACGAAAC 58.661 40.000 0.00 0.00 0.00 2.78
381 382 6.406624 GGAGGGAGTAAGAATGTATCACGAAA 60.407 42.308 0.00 0.00 0.00 3.46
382 383 5.068723 GGAGGGAGTAAGAATGTATCACGAA 59.931 44.000 0.00 0.00 0.00 3.85
383 384 4.583489 GGAGGGAGTAAGAATGTATCACGA 59.417 45.833 0.00 0.00 0.00 4.35
384 385 4.556898 CGGAGGGAGTAAGAATGTATCACG 60.557 50.000 0.00 0.00 0.00 4.35
385 386 4.341520 ACGGAGGGAGTAAGAATGTATCAC 59.658 45.833 0.00 0.00 0.00 3.06
386 387 4.543689 ACGGAGGGAGTAAGAATGTATCA 58.456 43.478 0.00 0.00 0.00 2.15
387 388 6.645790 TTACGGAGGGAGTAAGAATGTATC 57.354 41.667 0.00 0.00 31.30 2.24
388 389 6.837568 TCTTTACGGAGGGAGTAAGAATGTAT 59.162 38.462 0.00 0.00 35.75 2.29
389 390 6.189859 TCTTTACGGAGGGAGTAAGAATGTA 58.810 40.000 0.00 0.00 35.75 2.29
390 391 5.021458 TCTTTACGGAGGGAGTAAGAATGT 58.979 41.667 0.00 0.00 35.75 2.71
391 392 5.593679 TCTTTACGGAGGGAGTAAGAATG 57.406 43.478 0.00 0.00 35.75 2.67
392 393 6.616237 TTTCTTTACGGAGGGAGTAAGAAT 57.384 37.500 0.00 0.00 35.75 2.40
393 394 6.616237 ATTTCTTTACGGAGGGAGTAAGAA 57.384 37.500 0.00 0.00 35.75 2.52
394 395 7.909485 ATATTTCTTTACGGAGGGAGTAAGA 57.091 36.000 0.00 0.00 35.75 2.10
395 396 9.694137 CTTATATTTCTTTACGGAGGGAGTAAG 57.306 37.037 0.00 0.00 35.75 2.34
396 397 9.425248 TCTTATATTTCTTTACGGAGGGAGTAA 57.575 33.333 0.00 0.00 32.84 2.24
397 398 9.075678 CTCTTATATTTCTTTACGGAGGGAGTA 57.924 37.037 0.00 0.00 0.00 2.59
398 399 7.564292 ACTCTTATATTTCTTTACGGAGGGAGT 59.436 37.037 0.00 0.00 0.00 3.85
399 400 7.868415 CACTCTTATATTTCTTTACGGAGGGAG 59.132 40.741 0.00 0.00 0.00 4.30
400 401 7.343833 ACACTCTTATATTTCTTTACGGAGGGA 59.656 37.037 0.00 0.00 0.00 4.20
401 402 7.498443 ACACTCTTATATTTCTTTACGGAGGG 58.502 38.462 0.00 0.00 0.00 4.30
402 403 8.818057 CAACACTCTTATATTTCTTTACGGAGG 58.182 37.037 0.00 0.00 0.00 4.30
403 404 9.582431 TCAACACTCTTATATTTCTTTACGGAG 57.418 33.333 0.00 0.00 0.00 4.63
437 438 9.250624 AGCGTTTAGATCACTACTTTAATGATC 57.749 33.333 7.60 7.60 46.04 2.92
438 439 9.601217 AAGCGTTTAGATCACTACTTTAATGAT 57.399 29.630 0.00 0.00 35.77 2.45
439 440 8.997621 AAGCGTTTAGATCACTACTTTAATGA 57.002 30.769 0.00 0.00 0.00 2.57
468 469 9.754382 GTCGTACATCCCTCTGTAAATAAAATA 57.246 33.333 0.00 0.00 33.59 1.40
469 470 8.262227 TGTCGTACATCCCTCTGTAAATAAAAT 58.738 33.333 0.00 0.00 33.59 1.82
470 471 7.546667 GTGTCGTACATCCCTCTGTAAATAAAA 59.453 37.037 0.00 0.00 33.59 1.52
471 472 7.037438 GTGTCGTACATCCCTCTGTAAATAAA 58.963 38.462 0.00 0.00 33.59 1.40
472 473 6.567050 GTGTCGTACATCCCTCTGTAAATAA 58.433 40.000 0.00 0.00 33.59 1.40
473 474 5.220912 CGTGTCGTACATCCCTCTGTAAATA 60.221 44.000 0.00 0.00 33.59 1.40
474 475 4.439700 CGTGTCGTACATCCCTCTGTAAAT 60.440 45.833 0.00 0.00 33.59 1.40
475 476 3.119743 CGTGTCGTACATCCCTCTGTAAA 60.120 47.826 0.00 0.00 33.59 2.01
476 477 2.421073 CGTGTCGTACATCCCTCTGTAA 59.579 50.000 0.00 0.00 33.59 2.41
477 478 2.011947 CGTGTCGTACATCCCTCTGTA 58.988 52.381 0.00 0.00 0.00 2.74
478 479 0.809385 CGTGTCGTACATCCCTCTGT 59.191 55.000 0.00 0.00 0.00 3.41
479 480 1.092348 TCGTGTCGTACATCCCTCTG 58.908 55.000 0.00 0.00 0.00 3.35
480 481 1.093159 GTCGTGTCGTACATCCCTCT 58.907 55.000 0.00 0.00 0.00 3.69
481 482 1.093159 AGTCGTGTCGTACATCCCTC 58.907 55.000 0.00 0.00 0.00 4.30
482 483 1.542492 AAGTCGTGTCGTACATCCCT 58.458 50.000 0.00 0.00 0.00 4.20
483 484 2.793933 GCTAAGTCGTGTCGTACATCCC 60.794 54.545 0.00 0.00 0.00 3.85
484 485 2.159476 TGCTAAGTCGTGTCGTACATCC 60.159 50.000 0.00 0.00 0.00 3.51
485 486 3.099362 CTGCTAAGTCGTGTCGTACATC 58.901 50.000 0.00 0.00 0.00 3.06
486 487 2.731341 GCTGCTAAGTCGTGTCGTACAT 60.731 50.000 0.00 0.00 0.00 2.29
487 488 1.400629 GCTGCTAAGTCGTGTCGTACA 60.401 52.381 0.00 0.00 0.00 2.90
488 489 1.257539 GCTGCTAAGTCGTGTCGTAC 58.742 55.000 0.00 0.00 0.00 3.67
489 490 0.876399 TGCTGCTAAGTCGTGTCGTA 59.124 50.000 0.00 0.00 0.00 3.43
490 491 0.663568 GTGCTGCTAAGTCGTGTCGT 60.664 55.000 0.00 0.00 0.00 4.34
491 492 1.665544 CGTGCTGCTAAGTCGTGTCG 61.666 60.000 0.00 0.00 0.00 4.35
492 493 0.386858 TCGTGCTGCTAAGTCGTGTC 60.387 55.000 0.00 0.00 0.00 3.67
493 494 0.387367 CTCGTGCTGCTAAGTCGTGT 60.387 55.000 0.00 0.00 0.00 4.49
494 495 0.387367 ACTCGTGCTGCTAAGTCGTG 60.387 55.000 0.00 2.50 0.00 4.35
495 496 1.162698 TACTCGTGCTGCTAAGTCGT 58.837 50.000 0.00 0.00 0.00 4.34
496 497 2.257974 TTACTCGTGCTGCTAAGTCG 57.742 50.000 0.00 0.00 0.00 4.18
497 498 3.307242 CCAATTACTCGTGCTGCTAAGTC 59.693 47.826 0.00 0.00 0.00 3.01
498 499 3.262420 CCAATTACTCGTGCTGCTAAGT 58.738 45.455 0.00 4.41 0.00 2.24
499 500 2.030946 GCCAATTACTCGTGCTGCTAAG 59.969 50.000 0.00 0.00 0.00 2.18
500 501 2.006888 GCCAATTACTCGTGCTGCTAA 58.993 47.619 0.00 0.00 0.00 3.09
501 502 1.651987 GCCAATTACTCGTGCTGCTA 58.348 50.000 0.00 0.00 0.00 3.49
502 503 1.361668 CGCCAATTACTCGTGCTGCT 61.362 55.000 0.00 0.00 0.00 4.24
503 504 1.060937 CGCCAATTACTCGTGCTGC 59.939 57.895 0.00 0.00 0.00 5.25
504 505 1.635844 TACGCCAATTACTCGTGCTG 58.364 50.000 8.47 0.00 37.61 4.41
505 506 2.373540 TTACGCCAATTACTCGTGCT 57.626 45.000 8.47 0.00 37.61 4.40
506 507 3.458779 TTTTACGCCAATTACTCGTGC 57.541 42.857 8.47 0.00 37.61 5.34
507 508 8.120465 AGAAATATTTTACGCCAATTACTCGTG 58.880 33.333 1.43 0.00 37.61 4.35
508 509 8.205131 AGAAATATTTTACGCCAATTACTCGT 57.795 30.769 1.43 4.62 39.88 4.18
509 510 8.943925 CAAGAAATATTTTACGCCAATTACTCG 58.056 33.333 1.43 0.00 0.00 4.18
510 511 9.783256 ACAAGAAATATTTTACGCCAATTACTC 57.217 29.630 1.43 0.00 0.00 2.59
514 515 9.349145 GTGTACAAGAAATATTTTACGCCAATT 57.651 29.630 1.43 0.00 0.00 2.32
515 516 7.971722 GGTGTACAAGAAATATTTTACGCCAAT 59.028 33.333 23.42 3.65 39.09 3.16
516 517 7.306953 GGTGTACAAGAAATATTTTACGCCAA 58.693 34.615 23.42 2.35 39.09 4.52
517 518 6.402334 CGGTGTACAAGAAATATTTTACGCCA 60.402 38.462 25.62 10.24 39.18 5.69
518 519 5.961263 CGGTGTACAAGAAATATTTTACGCC 59.039 40.000 20.72 20.72 36.95 5.68
519 520 5.961263 CCGGTGTACAAGAAATATTTTACGC 59.039 40.000 1.43 7.33 0.00 4.42
520 521 7.148606 TGTCCGGTGTACAAGAAATATTTTACG 60.149 37.037 0.00 0.00 0.00 3.18
521 522 8.031848 TGTCCGGTGTACAAGAAATATTTTAC 57.968 34.615 0.00 1.89 0.00 2.01
522 523 7.334921 CCTGTCCGGTGTACAAGAAATATTTTA 59.665 37.037 0.00 0.00 0.00 1.52
523 524 6.150474 CCTGTCCGGTGTACAAGAAATATTTT 59.850 38.462 0.00 0.00 0.00 1.82
524 525 5.646360 CCTGTCCGGTGTACAAGAAATATTT 59.354 40.000 0.00 0.00 0.00 1.40
525 526 5.183228 CCTGTCCGGTGTACAAGAAATATT 58.817 41.667 0.00 0.00 0.00 1.28
526 527 4.383770 CCCTGTCCGGTGTACAAGAAATAT 60.384 45.833 0.00 0.00 0.00 1.28
527 528 3.055675 CCCTGTCCGGTGTACAAGAAATA 60.056 47.826 0.00 0.00 0.00 1.40
528 529 2.290071 CCCTGTCCGGTGTACAAGAAAT 60.290 50.000 0.00 0.00 0.00 2.17
529 530 1.071071 CCCTGTCCGGTGTACAAGAAA 59.929 52.381 0.00 0.00 0.00 2.52
530 531 0.682852 CCCTGTCCGGTGTACAAGAA 59.317 55.000 0.00 0.00 0.00 2.52
531 532 1.189524 CCCCTGTCCGGTGTACAAGA 61.190 60.000 0.00 0.00 0.00 3.02
532 533 1.295423 CCCCTGTCCGGTGTACAAG 59.705 63.158 0.00 0.00 0.00 3.16
533 534 1.459921 ACCCCTGTCCGGTGTACAA 60.460 57.895 0.00 0.00 30.39 2.41
534 535 1.909781 GACCCCTGTCCGGTGTACA 60.910 63.158 0.00 0.00 35.34 2.90
535 536 1.474332 TTGACCCCTGTCCGGTGTAC 61.474 60.000 0.00 0.00 41.01 2.90
571 573 9.964253 GTTAAAGCTACCTTAATTTTACTCGTC 57.036 33.333 0.00 0.00 0.00 4.20
587 589 1.136057 GCACACGCCAGTTAAAGCTAC 60.136 52.381 0.00 0.00 0.00 3.58
633 639 2.817258 CCCGTCTTTTGGAATTACAGCA 59.183 45.455 0.00 0.00 0.00 4.41
754 770 5.221783 TGGACGATTGATGATGATGAGGATT 60.222 40.000 0.00 0.00 0.00 3.01
770 786 6.097915 TGAAAAGAGTTAGACTGGACGATT 57.902 37.500 0.00 0.00 0.00 3.34
771 787 5.723672 TGAAAAGAGTTAGACTGGACGAT 57.276 39.130 0.00 0.00 0.00 3.73
867 913 3.392616 AGAGGAGAGGAGTGAGAGAGATC 59.607 52.174 0.00 0.00 0.00 2.75
868 914 3.397527 AGAGGAGAGGAGTGAGAGAGAT 58.602 50.000 0.00 0.00 0.00 2.75
873 919 6.296778 GGCTTATATAGAGGAGAGGAGTGAGA 60.297 46.154 0.00 0.00 0.00 3.27
874 920 5.885912 GGCTTATATAGAGGAGAGGAGTGAG 59.114 48.000 0.00 0.00 0.00 3.51
875 921 5.281297 GGGCTTATATAGAGGAGAGGAGTGA 60.281 48.000 0.00 0.00 0.00 3.41
876 922 4.953579 GGGCTTATATAGAGGAGAGGAGTG 59.046 50.000 0.00 0.00 0.00 3.51
877 923 4.324719 CGGGCTTATATAGAGGAGAGGAGT 60.325 50.000 0.00 0.00 0.00 3.85
878 924 4.204012 CGGGCTTATATAGAGGAGAGGAG 58.796 52.174 0.00 0.00 0.00 3.69
879 925 3.592427 ACGGGCTTATATAGAGGAGAGGA 59.408 47.826 0.00 0.00 0.00 3.71
880 926 3.949113 GACGGGCTTATATAGAGGAGAGG 59.051 52.174 0.00 0.00 0.00 3.69
881 927 3.949113 GGACGGGCTTATATAGAGGAGAG 59.051 52.174 0.00 0.00 0.00 3.20
882 928 3.332783 TGGACGGGCTTATATAGAGGAGA 59.667 47.826 0.00 0.00 0.00 3.71
883 929 3.698289 TGGACGGGCTTATATAGAGGAG 58.302 50.000 0.00 0.00 0.00 3.69
884 930 3.820195 TGGACGGGCTTATATAGAGGA 57.180 47.619 0.00 0.00 0.00 3.71
885 931 3.133003 CCATGGACGGGCTTATATAGAGG 59.867 52.174 5.56 0.00 0.00 3.69
957 1003 1.255882 AGCAGCTATCCGGATCTCTG 58.744 55.000 28.23 28.23 0.00 3.35
984 1034 0.950836 CCATCGCCACAACAGACAAA 59.049 50.000 0.00 0.00 0.00 2.83
1021 1071 2.757508 TGCCTCCTCGCCTCTCAG 60.758 66.667 0.00 0.00 0.00 3.35
1052 1102 2.040464 GCATCTCCTCCTCCCCCA 60.040 66.667 0.00 0.00 0.00 4.96
1477 1527 3.723348 GTCGCCGGAGTTGTTGGC 61.723 66.667 5.05 0.00 45.39 4.52
1478 1528 3.411351 CGTCGCCGGAGTTGTTGG 61.411 66.667 5.05 0.00 0.00 3.77
1632 1685 2.202146 GACACCGACGACGACGAG 60.202 66.667 20.63 14.36 42.66 4.18
1721 1774 1.930100 CTGATGATGACGCTTCCGC 59.070 57.895 0.00 0.00 38.22 5.54
1782 1835 3.469970 ATCATGAGGCCGCCGTGA 61.470 61.111 20.34 20.34 0.00 4.35
2012 2065 1.189524 CCCAGGTCACCGGTAGTTGA 61.190 60.000 6.87 0.00 0.00 3.18
2013 2066 1.295423 CCCAGGTCACCGGTAGTTG 59.705 63.158 6.87 3.51 0.00 3.16
2030 2083 1.369403 AACCTTCCCCTCAGTTACCC 58.631 55.000 0.00 0.00 0.00 3.69
2100 2153 3.771577 TGTTTTGAGGGAAGAGGAGAC 57.228 47.619 0.00 0.00 0.00 3.36
2181 2245 8.524870 AAAGAAAAATGAAAGATCCATCAACG 57.475 30.769 2.49 0.00 0.00 4.10
2208 2272 8.293157 GGAAAGAATGAGTAAAGTCCAAAAGAG 58.707 37.037 0.00 0.00 0.00 2.85
2209 2273 7.998964 AGGAAAGAATGAGTAAAGTCCAAAAGA 59.001 33.333 0.00 0.00 0.00 2.52
2307 2382 1.293924 CTCGTCAGGGATGCATGTTC 58.706 55.000 2.46 0.00 0.00 3.18
2309 2384 1.524002 CCTCGTCAGGGATGCATGT 59.476 57.895 2.46 0.00 35.89 3.21
2321 2396 0.807667 ATCGATTGCACAGCCTCGTC 60.808 55.000 0.00 0.00 35.35 4.20
2333 2444 6.663565 TCTCTCTCGACAGATTAATCGATTG 58.336 40.000 20.87 6.70 45.63 2.67
2337 2448 7.747888 ACATATCTCTCTCGACAGATTAATCG 58.252 38.462 9.78 7.61 39.72 3.34
2349 2460 8.568794 TGAAGGTTACATTACATATCTCTCTCG 58.431 37.037 0.00 0.00 0.00 4.04
2359 2470 7.408756 AACATGCATGAAGGTTACATTACAT 57.591 32.000 32.75 1.36 0.00 2.29
2361 2472 7.985476 AGTAACATGCATGAAGGTTACATTAC 58.015 34.615 32.40 23.22 44.87 1.89
2366 2477 6.978343 TGTAGTAACATGCATGAAGGTTAC 57.022 37.500 32.75 26.87 43.54 2.50
2368 2479 6.714810 TCTTTGTAGTAACATGCATGAAGGTT 59.285 34.615 32.75 18.24 34.97 3.50
2369 2480 6.237901 TCTTTGTAGTAACATGCATGAAGGT 58.762 36.000 32.75 16.01 34.97 3.50
2370 2481 6.741992 TCTTTGTAGTAACATGCATGAAGG 57.258 37.500 32.75 14.58 34.97 3.46
2412 2534 3.516615 CTTCGTCACCTCCTCAATCTTC 58.483 50.000 0.00 0.00 0.00 2.87
2450 2574 7.063898 CACACGTGATCAATTCATTCTAACTCT 59.936 37.037 25.01 0.00 36.54 3.24
2451 2575 7.176075 CACACGTGATCAATTCATTCTAACTC 58.824 38.462 25.01 0.00 36.54 3.01
2452 2576 6.402550 GCACACGTGATCAATTCATTCTAACT 60.403 38.462 25.01 0.00 36.54 2.24
2453 2577 5.734498 GCACACGTGATCAATTCATTCTAAC 59.266 40.000 25.01 0.00 36.54 2.34
2485 2615 3.308530 GCTTGTGATACAAAACTGTGGC 58.691 45.455 0.00 0.00 37.69 5.01
2516 2646 2.356313 ACGGGCATGCGATCGATC 60.356 61.111 25.61 15.68 0.00 3.69
2517 2647 2.356313 GACGGGCATGCGATCGAT 60.356 61.111 25.61 0.00 0.00 3.59
2532 2662 9.159364 ACCGAATACTTTTTATAGTTTGGAGAC 57.841 33.333 0.00 0.00 0.00 3.36
2604 2736 9.430623 GCCAAAATATCTAGAGTTATCTTCCTC 57.569 37.037 0.00 0.00 36.96 3.71
2605 2737 9.165057 AGCCAAAATATCTAGAGTTATCTTCCT 57.835 33.333 0.00 0.00 36.96 3.36
2611 2743 9.080097 ACGTCTAGCCAAAATATCTAGAGTTAT 57.920 33.333 0.00 0.00 39.34 1.89
2612 2744 8.461249 ACGTCTAGCCAAAATATCTAGAGTTA 57.539 34.615 0.00 0.00 39.34 2.24
2613 2745 7.349412 ACGTCTAGCCAAAATATCTAGAGTT 57.651 36.000 0.00 0.00 39.34 3.01
2614 2746 6.016108 GGACGTCTAGCCAAAATATCTAGAGT 60.016 42.308 16.46 0.00 39.34 3.24
2615 2747 6.383415 GGACGTCTAGCCAAAATATCTAGAG 58.617 44.000 16.46 0.00 39.34 2.43
2616 2748 5.048921 CGGACGTCTAGCCAAAATATCTAGA 60.049 44.000 16.46 0.00 37.17 2.43
2617 2749 5.154932 CGGACGTCTAGCCAAAATATCTAG 58.845 45.833 16.46 0.00 33.04 2.43
2627 2759 3.489731 CGTACGGACGTCTAGCCA 58.510 61.111 13.28 0.00 44.31 4.75
2652 2784 0.107214 TCATTGGATTGGCCGGAGAC 60.107 55.000 5.05 0.00 40.66 3.36
2718 2858 3.143215 TCCTCGGTGGTACTGTAAGTGG 61.143 54.545 0.00 0.00 41.23 4.00
2723 2863 2.291209 TGTTCCTCGGTGGTACTGTA 57.709 50.000 7.27 0.00 37.08 2.74
2725 2865 2.494471 TGTATGTTCCTCGGTGGTACTG 59.506 50.000 7.27 0.00 37.08 2.74
2727 2868 2.231964 TGTGTATGTTCCTCGGTGGTAC 59.768 50.000 0.00 0.00 36.74 3.34
2729 2870 1.001633 GTGTGTATGTTCCTCGGTGGT 59.998 52.381 0.00 0.00 37.07 4.16
2733 2874 2.029380 TCTGTGTGTGTATGTTCCTCGG 60.029 50.000 0.00 0.00 0.00 4.63
2734 2875 3.297830 TCTGTGTGTGTATGTTCCTCG 57.702 47.619 0.00 0.00 0.00 4.63
2737 2878 6.205853 TGGTTAATTCTGTGTGTGTATGTTCC 59.794 38.462 0.00 0.00 0.00 3.62
2738 2879 7.197071 TGGTTAATTCTGTGTGTGTATGTTC 57.803 36.000 0.00 0.00 0.00 3.18
2741 2882 6.086222 GCTTGGTTAATTCTGTGTGTGTATG 58.914 40.000 0.00 0.00 0.00 2.39
2743 2884 5.126779 TGCTTGGTTAATTCTGTGTGTGTA 58.873 37.500 0.00 0.00 0.00 2.90
2750 2891 5.185454 TCGATCATGCTTGGTTAATTCTGT 58.815 37.500 0.00 0.00 0.00 3.41
2760 2901 2.684374 TGTCCAATTCGATCATGCTTGG 59.316 45.455 0.00 6.89 38.14 3.61
2762 2903 2.357009 GCTGTCCAATTCGATCATGCTT 59.643 45.455 0.00 0.00 0.00 3.91
2796 2955 3.000724 GCGTCTCTATGTTTGTGCTGATC 59.999 47.826 0.00 0.00 0.00 2.92
2806 2967 2.499685 GCCCGGCGTCTCTATGTT 59.500 61.111 6.01 0.00 0.00 2.71
2808 2969 3.536917 TGGCCCGGCGTCTCTATG 61.537 66.667 6.01 0.00 0.00 2.23
2843 3008 1.134936 GTTTGCCCCACTTTCGTTGTT 60.135 47.619 0.00 0.00 0.00 2.83
2850 3016 0.823460 CACACAGTTTGCCCCACTTT 59.177 50.000 0.00 0.00 0.00 2.66
2889 3060 6.364976 ACATGCCAAAATAAAACTAAAGCGAC 59.635 34.615 0.00 0.00 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.