Multiple sequence alignment - TraesCS2B01G077400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G077400 chr2B 100.000 2408 0 0 1 2408 42956075 42958482 0.000000e+00 4447.0
1 TraesCS2B01G077400 chr2D 89.332 778 35 14 669 1430 27266826 27267571 0.000000e+00 933.0
2 TraesCS2B01G077400 chr2D 82.857 455 29 23 1458 1906 27267567 27267978 1.760000e-96 363.0
3 TraesCS2B01G077400 chr2D 91.200 125 9 1 521 643 27266704 27266828 4.120000e-38 169.0
4 TraesCS2B01G077400 chr2D 100.000 29 0 0 1 29 37056400 37056428 1.000000e-03 54.7
5 TraesCS2B01G077400 chr2A 88.199 805 42 20 669 1457 29593406 29594173 0.000000e+00 911.0
6 TraesCS2B01G077400 chr2A 95.745 423 12 5 31 449 43159513 43159093 0.000000e+00 676.0
7 TraesCS2B01G077400 chr2A 95.724 421 15 2 32 449 740398919 740399339 0.000000e+00 675.0
8 TraesCS2B01G077400 chr2A 95.498 422 14 4 32 450 3460013 3459594 0.000000e+00 669.0
9 TraesCS2B01G077400 chr2A 95.283 424 17 2 30 450 76870548 76870971 0.000000e+00 669.0
10 TraesCS2B01G077400 chr2A 94.836 426 18 3 28 450 88726480 88726904 0.000000e+00 662.0
11 TraesCS2B01G077400 chr2A 83.102 361 24 16 1551 1906 29594214 29594542 6.510000e-76 294.0
12 TraesCS2B01G077400 chr2A 90.604 149 10 2 521 665 29593288 29593436 6.790000e-46 195.0
13 TraesCS2B01G077400 chr6B 95.804 429 13 4 25 449 447958188 447958615 0.000000e+00 688.0
14 TraesCS2B01G077400 chr6B 95.181 415 16 3 1997 2408 657253610 657253197 0.000000e+00 652.0
15 TraesCS2B01G077400 chr3A 95.972 422 12 4 32 450 662408309 662408728 0.000000e+00 680.0
16 TraesCS2B01G077400 chr1B 94.919 433 17 4 24 453 618003453 618003023 0.000000e+00 673.0
17 TraesCS2B01G077400 chr1B 95.422 415 18 1 1995 2408 49437621 49438035 0.000000e+00 660.0
18 TraesCS2B01G077400 chr5B 95.663 415 18 0 1994 2408 16175640 16176054 0.000000e+00 667.0
19 TraesCS2B01G077400 chr5B 95.024 422 18 3 1989 2408 527330529 527330949 0.000000e+00 660.0
20 TraesCS2B01G077400 chr5B 95.215 418 18 2 1992 2408 579006545 579006129 0.000000e+00 660.0
21 TraesCS2B01G077400 chr5B 94.952 416 20 1 1994 2408 15098648 15099063 0.000000e+00 651.0
22 TraesCS2B01G077400 chr5B 96.875 32 1 0 1 32 222582799 222582830 1.000000e-03 54.7
23 TraesCS2B01G077400 chr6A 95.249 421 17 2 32 449 134550302 134549882 0.000000e+00 664.0
24 TraesCS2B01G077400 chr4B 95.169 414 20 0 1995 2408 28506594 28506181 0.000000e+00 654.0
25 TraesCS2B01G077400 chr7B 94.964 417 19 2 1994 2408 693859272 693859688 0.000000e+00 652.0
26 TraesCS2B01G077400 chr7B 95.169 414 17 3 1997 2408 72619405 72618993 0.000000e+00 651.0
27 TraesCS2B01G077400 chr7A 100.000 32 0 0 1 32 708286355 708286386 2.590000e-05 60.2
28 TraesCS2B01G077400 chr4D 100.000 32 0 0 1 32 204704130 204704161 2.590000e-05 60.2
29 TraesCS2B01G077400 chr6D 100.000 31 0 0 1 31 386911310 386911280 9.300000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G077400 chr2B 42956075 42958482 2407 False 4447.000000 4447 100.000000 1 2408 1 chr2B.!!$F1 2407
1 TraesCS2B01G077400 chr2D 27266704 27267978 1274 False 488.333333 933 87.796333 521 1906 3 chr2D.!!$F2 1385
2 TraesCS2B01G077400 chr2A 29593288 29594542 1254 False 466.666667 911 87.301667 521 1906 3 chr2A.!!$F4 1385

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
466 467 0.109458 CCGCTTGCGTCTGTACTGTA 60.109 55.0 13.97 0.0 0.0 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2217 2259 0.039527 CAAGAAACGGCGGGAAAAGG 60.04 55.0 13.24 0.0 0.0 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.906073 TGTATGCATGTATATATGAGCGCT 58.094 37.500 11.27 11.27 0.00 5.92
24 25 6.340522 TGTATGCATGTATATATGAGCGCTT 58.659 36.000 13.26 0.00 0.00 4.68
25 26 5.729974 ATGCATGTATATATGAGCGCTTG 57.270 39.130 13.26 2.09 0.00 4.01
26 27 3.371898 TGCATGTATATATGAGCGCTTGC 59.628 43.478 13.26 14.13 39.58 4.01
27 28 3.542875 GCATGTATATATGAGCGCTTGCG 60.543 47.826 13.26 10.90 45.69 4.85
28 29 3.297830 TGTATATATGAGCGCTTGCGT 57.702 42.857 13.26 3.24 45.69 5.24
29 30 3.242518 TGTATATATGAGCGCTTGCGTC 58.757 45.455 13.26 12.36 45.69 5.19
30 31 2.732412 ATATATGAGCGCTTGCGTCT 57.268 45.000 13.26 13.17 45.69 4.18
31 32 1.770957 TATATGAGCGCTTGCGTCTG 58.229 50.000 13.26 0.00 45.69 3.51
32 33 0.877649 ATATGAGCGCTTGCGTCTGG 60.878 55.000 13.26 0.00 45.69 3.86
33 34 2.906182 TATGAGCGCTTGCGTCTGGG 62.906 60.000 13.26 0.00 45.69 4.45
34 35 4.742201 GAGCGCTTGCGTCTGGGA 62.742 66.667 13.26 0.00 45.69 4.37
35 36 4.314440 AGCGCTTGCGTCTGGGAA 62.314 61.111 16.38 0.00 45.69 3.97
36 37 3.353836 GCGCTTGCGTCTGGGAAA 61.354 61.111 16.38 0.00 0.00 3.13
37 38 2.863153 CGCTTGCGTCTGGGAAAG 59.137 61.111 6.86 0.00 0.00 2.62
38 39 1.961277 CGCTTGCGTCTGGGAAAGT 60.961 57.895 6.86 0.00 0.00 2.66
39 40 0.669318 CGCTTGCGTCTGGGAAAGTA 60.669 55.000 6.86 0.00 0.00 2.24
40 41 1.739067 GCTTGCGTCTGGGAAAGTAT 58.261 50.000 0.00 0.00 0.00 2.12
41 42 2.084546 GCTTGCGTCTGGGAAAGTATT 58.915 47.619 0.00 0.00 0.00 1.89
42 43 3.267483 GCTTGCGTCTGGGAAAGTATTA 58.733 45.455 0.00 0.00 0.00 0.98
43 44 3.309954 GCTTGCGTCTGGGAAAGTATTAG 59.690 47.826 0.00 0.00 0.00 1.73
44 45 4.504858 CTTGCGTCTGGGAAAGTATTAGT 58.495 43.478 0.00 0.00 0.00 2.24
45 46 3.857052 TGCGTCTGGGAAAGTATTAGTG 58.143 45.455 0.00 0.00 0.00 2.74
46 47 2.608090 GCGTCTGGGAAAGTATTAGTGC 59.392 50.000 0.00 0.00 0.00 4.40
47 48 3.679083 GCGTCTGGGAAAGTATTAGTGCT 60.679 47.826 0.00 0.00 0.00 4.40
48 49 4.113354 CGTCTGGGAAAGTATTAGTGCTC 58.887 47.826 0.00 0.00 0.00 4.26
49 50 4.443621 GTCTGGGAAAGTATTAGTGCTCC 58.556 47.826 0.00 0.00 0.00 4.70
50 51 3.454812 TCTGGGAAAGTATTAGTGCTCCC 59.545 47.826 10.28 10.28 36.74 4.30
51 52 3.186283 TGGGAAAGTATTAGTGCTCCCA 58.814 45.455 13.94 13.94 43.15 4.37
52 53 3.199946 TGGGAAAGTATTAGTGCTCCCAG 59.800 47.826 13.94 0.00 40.82 4.45
53 54 3.433740 GGGAAAGTATTAGTGCTCCCAGG 60.434 52.174 11.61 0.00 36.26 4.45
54 55 3.206964 GAAAGTATTAGTGCTCCCAGGC 58.793 50.000 0.00 0.00 0.00 4.85
55 56 2.182516 AGTATTAGTGCTCCCAGGCT 57.817 50.000 0.00 0.00 0.00 4.58
56 57 2.482494 AGTATTAGTGCTCCCAGGCTT 58.518 47.619 0.00 0.00 0.00 4.35
57 58 2.171448 AGTATTAGTGCTCCCAGGCTTG 59.829 50.000 0.00 0.00 0.00 4.01
58 59 0.257039 ATTAGTGCTCCCAGGCTTGG 59.743 55.000 8.15 8.15 44.60 3.61
66 67 4.748144 CCAGGCTTGGGGTGCTCC 62.748 72.222 7.05 0.00 41.05 4.70
77 78 4.329545 GTGCTCCCGGTGCTCCAA 62.330 66.667 16.01 0.00 0.00 3.53
78 79 3.565214 TGCTCCCGGTGCTCCAAA 61.565 61.111 16.01 0.00 0.00 3.28
79 80 2.044946 GCTCCCGGTGCTCCAAAT 60.045 61.111 0.00 0.00 0.00 2.32
80 81 2.409870 GCTCCCGGTGCTCCAAATG 61.410 63.158 0.00 0.00 0.00 2.32
81 82 1.002134 CTCCCGGTGCTCCAAATGT 60.002 57.895 0.00 0.00 0.00 2.71
82 83 1.002624 TCCCGGTGCTCCAAATGTC 60.003 57.895 0.00 0.00 0.00 3.06
83 84 2.046285 CCCGGTGCTCCAAATGTCC 61.046 63.158 0.00 0.00 0.00 4.02
84 85 2.398554 CCGGTGCTCCAAATGTCCG 61.399 63.158 5.52 0.00 38.05 4.79
85 86 1.375396 CGGTGCTCCAAATGTCCGA 60.375 57.895 5.52 0.00 40.29 4.55
86 87 0.953471 CGGTGCTCCAAATGTCCGAA 60.953 55.000 5.52 0.00 40.29 4.30
87 88 1.243902 GGTGCTCCAAATGTCCGAAA 58.756 50.000 0.00 0.00 0.00 3.46
88 89 1.611491 GGTGCTCCAAATGTCCGAAAA 59.389 47.619 0.00 0.00 0.00 2.29
89 90 2.035321 GGTGCTCCAAATGTCCGAAAAA 59.965 45.455 0.00 0.00 0.00 1.94
90 91 3.049912 GTGCTCCAAATGTCCGAAAAAC 58.950 45.455 0.00 0.00 0.00 2.43
91 92 2.690497 TGCTCCAAATGTCCGAAAAACA 59.310 40.909 0.00 0.00 0.00 2.83
92 93 3.320541 TGCTCCAAATGTCCGAAAAACAT 59.679 39.130 0.00 0.00 38.98 2.71
93 94 4.202202 TGCTCCAAATGTCCGAAAAACATT 60.202 37.500 0.00 0.00 46.53 2.71
105 106 9.974750 TGTCCGAAAAACATTTTTAAAATGTTC 57.025 25.926 34.29 25.53 46.62 3.18
106 107 9.974750 GTCCGAAAAACATTTTTAAAATGTTCA 57.025 25.926 34.29 18.85 46.62 3.18
138 139 1.967762 AAAAATGCAGCACATCGACG 58.032 45.000 0.00 0.00 38.34 5.12
139 140 0.168788 AAAATGCAGCACATCGACGG 59.831 50.000 0.00 0.00 38.34 4.79
140 141 0.673333 AAATGCAGCACATCGACGGA 60.673 50.000 0.00 0.00 38.34 4.69
141 142 0.673333 AATGCAGCACATCGACGGAA 60.673 50.000 0.00 0.00 38.34 4.30
142 143 1.361668 ATGCAGCACATCGACGGAAC 61.362 55.000 0.00 0.00 31.52 3.62
143 144 2.027073 GCAGCACATCGACGGAACA 61.027 57.895 0.00 0.00 0.00 3.18
144 145 1.361668 GCAGCACATCGACGGAACAT 61.362 55.000 0.00 0.00 0.00 2.71
145 146 0.647410 CAGCACATCGACGGAACATC 59.353 55.000 0.00 0.00 0.00 3.06
154 155 2.853731 GACGGAACATCGATGTCTCT 57.146 50.000 30.06 15.98 40.80 3.10
155 156 3.152261 GACGGAACATCGATGTCTCTT 57.848 47.619 30.06 15.59 40.80 2.85
156 157 2.854777 GACGGAACATCGATGTCTCTTG 59.145 50.000 30.06 22.82 40.80 3.02
157 158 2.231478 ACGGAACATCGATGTCTCTTGT 59.769 45.455 30.06 23.30 40.80 3.16
158 159 2.854777 CGGAACATCGATGTCTCTTGTC 59.145 50.000 30.06 21.40 40.80 3.18
159 160 3.673323 CGGAACATCGATGTCTCTTGTCA 60.673 47.826 30.06 0.00 40.80 3.58
160 161 3.614616 GGAACATCGATGTCTCTTGTCAC 59.385 47.826 30.06 13.06 40.80 3.67
161 162 3.942130 ACATCGATGTCTCTTGTCACA 57.058 42.857 25.18 0.00 35.87 3.58
162 163 4.257267 ACATCGATGTCTCTTGTCACAA 57.743 40.909 25.18 0.00 35.87 3.33
163 164 4.631131 ACATCGATGTCTCTTGTCACAAA 58.369 39.130 25.18 0.00 35.87 2.83
164 165 5.056480 ACATCGATGTCTCTTGTCACAAAA 58.944 37.500 25.18 0.00 35.87 2.44
165 166 5.702670 ACATCGATGTCTCTTGTCACAAAAT 59.297 36.000 25.18 0.00 35.87 1.82
166 167 6.205464 ACATCGATGTCTCTTGTCACAAAATT 59.795 34.615 25.18 0.00 35.87 1.82
167 168 6.618287 TCGATGTCTCTTGTCACAAAATTT 57.382 33.333 0.00 0.00 0.00 1.82
168 169 6.658831 TCGATGTCTCTTGTCACAAAATTTC 58.341 36.000 0.00 0.00 0.00 2.17
169 170 6.259829 TCGATGTCTCTTGTCACAAAATTTCA 59.740 34.615 0.00 0.00 0.00 2.69
170 171 6.912051 CGATGTCTCTTGTCACAAAATTTCAA 59.088 34.615 0.00 0.00 0.00 2.69
171 172 7.431960 CGATGTCTCTTGTCACAAAATTTCAAA 59.568 33.333 0.00 0.00 0.00 2.69
172 173 9.252962 GATGTCTCTTGTCACAAAATTTCAAAT 57.747 29.630 0.00 0.00 0.00 2.32
173 174 8.633075 TGTCTCTTGTCACAAAATTTCAAATC 57.367 30.769 0.00 0.00 0.00 2.17
174 175 8.249638 TGTCTCTTGTCACAAAATTTCAAATCA 58.750 29.630 0.00 0.00 0.00 2.57
175 176 9.086336 GTCTCTTGTCACAAAATTTCAAATCAA 57.914 29.630 0.00 0.00 0.00 2.57
176 177 9.650539 TCTCTTGTCACAAAATTTCAAATCAAA 57.349 25.926 0.00 0.00 0.00 2.69
181 182 9.699985 TGTCACAAAATTTCAAATCAAAATTCG 57.300 25.926 0.00 0.00 35.75 3.34
182 183 9.913451 GTCACAAAATTTCAAATCAAAATTCGA 57.087 25.926 0.00 0.00 35.75 3.71
190 191 8.765044 TTTCAAATCAAAATTCGAAACATTGC 57.235 26.923 0.00 0.00 0.00 3.56
191 192 7.712264 TCAAATCAAAATTCGAAACATTGCT 57.288 28.000 0.00 0.00 0.00 3.91
192 193 7.786114 TCAAATCAAAATTCGAAACATTGCTC 58.214 30.769 0.00 0.00 0.00 4.26
193 194 5.997732 ATCAAAATTCGAAACATTGCTCG 57.002 34.783 0.00 3.07 36.39 5.03
194 195 5.102020 TCAAAATTCGAAACATTGCTCGA 57.898 34.783 0.00 7.21 42.05 4.04
195 196 5.146460 TCAAAATTCGAAACATTGCTCGAG 58.854 37.500 8.45 8.45 44.25 4.04
196 197 5.049749 TCAAAATTCGAAACATTGCTCGAGA 60.050 36.000 18.75 0.00 44.25 4.04
197 198 5.551760 AAATTCGAAACATTGCTCGAGAT 57.448 34.783 18.75 0.00 44.25 2.75
198 199 6.662414 AAATTCGAAACATTGCTCGAGATA 57.338 33.333 18.75 2.54 44.25 1.98
199 200 5.643339 ATTCGAAACATTGCTCGAGATAC 57.357 39.130 18.75 0.00 44.25 2.24
200 201 4.104696 TCGAAACATTGCTCGAGATACA 57.895 40.909 18.75 1.12 39.07 2.29
201 202 4.490743 TCGAAACATTGCTCGAGATACAA 58.509 39.130 18.75 11.56 39.07 2.41
202 203 4.926832 TCGAAACATTGCTCGAGATACAAA 59.073 37.500 18.75 2.00 39.07 2.83
203 204 5.407084 TCGAAACATTGCTCGAGATACAAAA 59.593 36.000 18.75 0.13 39.07 2.44
204 205 6.073494 TCGAAACATTGCTCGAGATACAAAAA 60.073 34.615 18.75 0.00 39.07 1.94
205 206 6.742718 CGAAACATTGCTCGAGATACAAAAAT 59.257 34.615 18.75 0.84 37.23 1.82
206 207 7.253092 CGAAACATTGCTCGAGATACAAAAATG 60.253 37.037 18.75 14.25 37.23 2.32
207 208 6.741992 ACATTGCTCGAGATACAAAAATGA 57.258 33.333 18.75 0.00 0.00 2.57
208 209 6.546395 ACATTGCTCGAGATACAAAAATGAC 58.454 36.000 18.75 0.00 0.00 3.06
209 210 6.149308 ACATTGCTCGAGATACAAAAATGACA 59.851 34.615 18.75 0.00 0.00 3.58
210 211 6.552859 TTGCTCGAGATACAAAAATGACAA 57.447 33.333 18.75 2.82 0.00 3.18
211 212 6.552859 TGCTCGAGATACAAAAATGACAAA 57.447 33.333 18.75 0.00 0.00 2.83
212 213 7.144722 TGCTCGAGATACAAAAATGACAAAT 57.855 32.000 18.75 0.00 0.00 2.32
213 214 7.592938 TGCTCGAGATACAAAAATGACAAATT 58.407 30.769 18.75 0.00 0.00 1.82
214 215 8.081633 TGCTCGAGATACAAAAATGACAAATTT 58.918 29.630 18.75 0.00 0.00 1.82
215 216 8.915654 GCTCGAGATACAAAAATGACAAATTTT 58.084 29.630 18.75 0.00 33.12 1.82
236 237 8.996024 ATTTTTGTACATAACATAAGTTGGGC 57.004 30.769 0.00 0.00 38.10 5.36
237 238 7.768807 TTTTGTACATAACATAAGTTGGGCT 57.231 32.000 0.00 0.00 38.10 5.19
238 239 7.768807 TTTGTACATAACATAAGTTGGGCTT 57.231 32.000 0.00 0.00 38.10 4.35
239 240 7.768807 TTGTACATAACATAAGTTGGGCTTT 57.231 32.000 0.00 0.00 38.10 3.51
240 241 8.865420 TTGTACATAACATAAGTTGGGCTTTA 57.135 30.769 0.00 0.00 38.10 1.85
241 242 8.500753 TGTACATAACATAAGTTGGGCTTTAG 57.499 34.615 0.00 0.00 38.69 1.85
242 243 8.104566 TGTACATAACATAAGTTGGGCTTTAGT 58.895 33.333 0.00 0.00 38.69 2.24
243 244 8.953313 GTACATAACATAAGTTGGGCTTTAGTT 58.047 33.333 0.00 0.00 38.69 2.24
244 245 8.417273 ACATAACATAAGTTGGGCTTTAGTTT 57.583 30.769 0.00 0.00 38.69 2.66
245 246 8.866093 ACATAACATAAGTTGGGCTTTAGTTTT 58.134 29.630 0.00 0.00 38.69 2.43
246 247 9.139174 CATAACATAAGTTGGGCTTTAGTTTTG 57.861 33.333 0.00 0.00 38.69 2.44
247 248 6.096673 ACATAAGTTGGGCTTTAGTTTTGG 57.903 37.500 0.00 0.00 38.57 3.28
248 249 3.469008 AAGTTGGGCTTTAGTTTTGGC 57.531 42.857 0.00 0.00 32.57 4.52
249 250 1.691976 AGTTGGGCTTTAGTTTTGGCC 59.308 47.619 0.00 0.00 45.24 5.36
255 256 4.753516 GGCTTTAGTTTTGGCCCATTAT 57.246 40.909 0.00 0.00 38.77 1.28
256 257 4.693283 GGCTTTAGTTTTGGCCCATTATC 58.307 43.478 0.00 0.00 38.77 1.75
257 258 4.161377 GGCTTTAGTTTTGGCCCATTATCA 59.839 41.667 0.00 0.00 38.77 2.15
258 259 5.109210 GCTTTAGTTTTGGCCCATTATCAC 58.891 41.667 0.00 0.00 0.00 3.06
259 260 5.337169 GCTTTAGTTTTGGCCCATTATCACA 60.337 40.000 0.00 0.00 0.00 3.58
260 261 5.913137 TTAGTTTTGGCCCATTATCACAG 57.087 39.130 0.00 0.00 0.00 3.66
261 262 4.046286 AGTTTTGGCCCATTATCACAGA 57.954 40.909 0.00 0.00 0.00 3.41
262 263 4.613437 AGTTTTGGCCCATTATCACAGAT 58.387 39.130 0.00 0.00 0.00 2.90
263 264 4.403432 AGTTTTGGCCCATTATCACAGATG 59.597 41.667 0.00 0.00 0.00 2.90
264 265 3.668141 TTGGCCCATTATCACAGATGT 57.332 42.857 0.00 0.00 0.00 3.06
265 266 3.213206 TGGCCCATTATCACAGATGTC 57.787 47.619 0.00 0.00 0.00 3.06
266 267 2.509131 TGGCCCATTATCACAGATGTCA 59.491 45.455 0.00 0.00 0.00 3.58
267 268 3.053768 TGGCCCATTATCACAGATGTCAA 60.054 43.478 0.00 0.00 0.00 3.18
268 269 3.953612 GGCCCATTATCACAGATGTCAAA 59.046 43.478 0.00 0.00 0.00 2.69
269 270 4.586001 GGCCCATTATCACAGATGTCAAAT 59.414 41.667 0.00 0.00 0.00 2.32
270 271 5.069516 GGCCCATTATCACAGATGTCAAATT 59.930 40.000 0.00 0.00 0.00 1.82
271 272 6.407299 GGCCCATTATCACAGATGTCAAATTT 60.407 38.462 0.00 0.00 0.00 1.82
272 273 6.477688 GCCCATTATCACAGATGTCAAATTTG 59.522 38.462 12.15 12.15 0.00 2.32
273 274 7.549839 CCCATTATCACAGATGTCAAATTTGT 58.450 34.615 17.47 0.00 0.00 2.83
274 275 7.703621 CCCATTATCACAGATGTCAAATTTGTC 59.296 37.037 17.47 12.75 0.00 3.18
275 276 8.245491 CCATTATCACAGATGTCAAATTTGTCA 58.755 33.333 18.21 18.21 0.00 3.58
276 277 9.797556 CATTATCACAGATGTCAAATTTGTCAT 57.202 29.630 24.64 24.64 39.12 3.06
280 281 8.945481 TCACAGATGTCAAATTTGTCATTTTT 57.055 26.923 24.99 14.19 37.13 1.94
281 282 8.819015 TCACAGATGTCAAATTTGTCATTTTTG 58.181 29.630 24.99 22.02 37.13 2.44
282 283 8.605746 CACAGATGTCAAATTTGTCATTTTTGT 58.394 29.630 24.99 23.56 37.13 2.83
283 284 9.814899 ACAGATGTCAAATTTGTCATTTTTGTA 57.185 25.926 24.99 2.31 37.13 2.41
288 289 9.179552 TGTCAAATTTGTCATTTTTGTATCTCG 57.820 29.630 17.47 0.00 33.24 4.04
289 290 9.393249 GTCAAATTTGTCATTTTTGTATCTCGA 57.607 29.630 17.47 0.00 33.24 4.04
290 291 9.611284 TCAAATTTGTCATTTTTGTATCTCGAG 57.389 29.630 17.47 5.93 33.24 4.04
291 292 8.368126 CAAATTTGTCATTTTTGTATCTCGAGC 58.632 33.333 7.81 0.00 0.00 5.03
292 293 6.552859 TTTGTCATTTTTGTATCTCGAGCA 57.447 33.333 7.81 0.00 0.00 4.26
293 294 6.552859 TTGTCATTTTTGTATCTCGAGCAA 57.447 33.333 7.81 3.53 0.00 3.91
294 295 6.741992 TGTCATTTTTGTATCTCGAGCAAT 57.258 33.333 7.81 0.00 0.00 3.56
295 296 6.545508 TGTCATTTTTGTATCTCGAGCAATG 58.454 36.000 7.81 7.21 0.00 2.82
296 297 6.149308 TGTCATTTTTGTATCTCGAGCAATGT 59.851 34.615 7.81 0.00 0.00 2.71
297 298 7.023575 GTCATTTTTGTATCTCGAGCAATGTT 58.976 34.615 7.81 0.00 0.00 2.71
298 299 7.538678 GTCATTTTTGTATCTCGAGCAATGTTT 59.461 33.333 7.81 0.00 0.00 2.83
299 300 7.750458 TCATTTTTGTATCTCGAGCAATGTTTC 59.250 33.333 7.81 0.00 0.00 2.78
300 301 4.840401 TTGTATCTCGAGCAATGTTTCG 57.160 40.909 7.81 3.56 38.13 3.46
301 302 4.104696 TGTATCTCGAGCAATGTTTCGA 57.895 40.909 7.81 10.47 42.91 3.71
302 303 4.490743 TGTATCTCGAGCAATGTTTCGAA 58.509 39.130 7.81 0.00 44.25 3.71
303 304 5.109210 TGTATCTCGAGCAATGTTTCGAAT 58.891 37.500 7.81 10.43 44.25 3.34
304 305 5.580691 TGTATCTCGAGCAATGTTTCGAATT 59.419 36.000 7.81 6.31 44.25 2.17
305 306 5.551760 ATCTCGAGCAATGTTTCGAATTT 57.448 34.783 7.81 0.00 44.25 1.82
306 307 5.356882 TCTCGAGCAATGTTTCGAATTTT 57.643 34.783 7.81 0.00 44.25 1.82
307 308 5.757886 TCTCGAGCAATGTTTCGAATTTTT 58.242 33.333 7.81 0.00 44.25 1.94
308 309 6.893759 TCTCGAGCAATGTTTCGAATTTTTA 58.106 32.000 7.81 0.00 44.25 1.52
309 310 7.526608 TCTCGAGCAATGTTTCGAATTTTTAT 58.473 30.769 7.81 0.00 44.25 1.40
310 311 8.020819 TCTCGAGCAATGTTTCGAATTTTTATT 58.979 29.630 7.81 0.00 44.25 1.40
311 312 8.514136 TCGAGCAATGTTTCGAATTTTTATTT 57.486 26.923 0.00 0.00 42.27 1.40
312 313 8.423973 TCGAGCAATGTTTCGAATTTTTATTTG 58.576 29.630 0.00 0.00 42.27 2.32
313 314 8.423973 CGAGCAATGTTTCGAATTTTTATTTGA 58.576 29.630 0.00 0.00 39.06 2.69
334 335 9.688592 ATTTGAAATTTTCTGACAAGAGACATC 57.311 29.630 10.33 0.00 32.79 3.06
335 336 6.891624 TGAAATTTTCTGACAAGAGACATCG 58.108 36.000 10.33 0.00 32.79 3.84
336 337 6.705825 TGAAATTTTCTGACAAGAGACATCGA 59.294 34.615 10.33 0.00 32.79 3.59
337 338 7.388776 TGAAATTTTCTGACAAGAGACATCGAT 59.611 33.333 10.33 0.00 32.79 3.59
338 339 6.659361 ATTTTCTGACAAGAGACATCGATG 57.341 37.500 23.68 23.68 32.79 3.84
339 340 4.790765 TTCTGACAAGAGACATCGATGT 57.209 40.909 30.37 30.37 45.16 3.06
340 341 4.790765 TCTGACAAGAGACATCGATGTT 57.209 40.909 30.46 20.01 41.95 2.71
341 342 4.738124 TCTGACAAGAGACATCGATGTTC 58.262 43.478 30.46 25.63 41.95 3.18
342 343 3.849911 TGACAAGAGACATCGATGTTCC 58.150 45.455 30.46 23.29 41.95 3.62
343 344 2.854777 GACAAGAGACATCGATGTTCCG 59.145 50.000 30.46 21.82 41.95 4.30
344 345 2.231478 ACAAGAGACATCGATGTTCCGT 59.769 45.455 30.46 22.32 41.95 4.69
345 346 2.853731 AGAGACATCGATGTTCCGTC 57.146 50.000 30.46 22.49 41.95 4.79
346 347 1.064208 AGAGACATCGATGTTCCGTCG 59.936 52.381 30.46 2.94 41.95 5.12
351 352 3.322526 TCGATGTTCCGTCGATGTG 57.677 52.632 3.52 0.00 45.17 3.21
352 353 0.800683 TCGATGTTCCGTCGATGTGC 60.801 55.000 3.52 0.00 45.17 4.57
353 354 0.802222 CGATGTTCCGTCGATGTGCT 60.802 55.000 3.52 0.00 44.49 4.40
354 355 0.647410 GATGTTCCGTCGATGTGCTG 59.353 55.000 3.52 0.00 0.00 4.41
355 356 1.361668 ATGTTCCGTCGATGTGCTGC 61.362 55.000 3.52 0.00 0.00 5.25
356 357 2.027073 GTTCCGTCGATGTGCTGCA 61.027 57.895 0.00 0.00 0.00 4.41
357 358 1.079197 TTCCGTCGATGTGCTGCAT 60.079 52.632 5.27 0.00 41.24 3.96
358 359 0.673333 TTCCGTCGATGTGCTGCATT 60.673 50.000 5.27 0.00 38.06 3.56
359 360 0.673333 TCCGTCGATGTGCTGCATTT 60.673 50.000 5.27 0.00 38.06 2.32
360 361 0.168788 CCGTCGATGTGCTGCATTTT 59.831 50.000 5.27 0.00 38.06 1.82
361 362 1.401409 CCGTCGATGTGCTGCATTTTT 60.401 47.619 5.27 0.00 38.06 1.94
407 408 4.629527 AAAATGTTTTTCGCATCGAAGC 57.370 36.364 1.73 1.73 46.43 3.86
408 409 2.987413 ATGTTTTTCGCATCGAAGCA 57.013 40.000 13.66 0.00 46.43 3.91
409 410 2.031037 TGTTTTTCGCATCGAAGCAC 57.969 45.000 13.66 3.35 46.43 4.40
410 411 1.327507 GTTTTTCGCATCGAAGCACC 58.672 50.000 13.66 0.00 46.43 5.01
411 412 0.110419 TTTTTCGCATCGAAGCACCG 60.110 50.000 13.66 0.00 46.43 4.94
412 413 1.906994 TTTTCGCATCGAAGCACCGG 61.907 55.000 13.66 0.00 46.43 5.28
413 414 4.812476 TCGCATCGAAGCACCGGG 62.812 66.667 13.66 0.00 31.06 5.73
414 415 4.812476 CGCATCGAAGCACCGGGA 62.812 66.667 13.66 0.00 0.00 5.14
415 416 2.892425 GCATCGAAGCACCGGGAG 60.892 66.667 7.93 0.00 0.00 4.30
416 417 2.892425 CATCGAAGCACCGGGAGC 60.892 66.667 6.32 10.14 0.00 4.70
417 418 3.390521 ATCGAAGCACCGGGAGCA 61.391 61.111 21.10 3.01 0.00 4.26
418 419 3.665675 ATCGAAGCACCGGGAGCAC 62.666 63.158 21.10 13.78 0.00 4.40
439 440 3.517296 CCTAGATCTGGGAGCAGTAGA 57.483 52.381 20.10 0.00 32.26 2.59
440 441 4.046286 CCTAGATCTGGGAGCAGTAGAT 57.954 50.000 20.10 0.00 34.06 1.98
441 442 5.186256 CCTAGATCTGGGAGCAGTAGATA 57.814 47.826 20.10 0.00 31.67 1.98
442 443 4.947388 CCTAGATCTGGGAGCAGTAGATAC 59.053 50.000 20.10 0.00 31.67 2.24
443 444 4.740154 AGATCTGGGAGCAGTAGATACT 57.260 45.455 0.00 0.00 36.90 2.12
444 445 5.073437 AGATCTGGGAGCAGTAGATACTT 57.927 43.478 0.00 0.00 33.46 2.24
445 446 5.463154 AGATCTGGGAGCAGTAGATACTTT 58.537 41.667 0.00 0.00 33.46 2.66
446 447 5.538433 AGATCTGGGAGCAGTAGATACTTTC 59.462 44.000 0.00 0.00 33.46 2.62
447 448 3.961408 TCTGGGAGCAGTAGATACTTTCC 59.039 47.826 10.07 10.07 37.03 3.13
448 449 3.755112 GGGAGCAGTAGATACTTTCCC 57.245 52.381 17.41 17.41 44.13 3.97
449 450 2.036089 GGGAGCAGTAGATACTTTCCCG 59.964 54.545 17.41 0.00 42.77 5.14
450 451 2.546162 GGAGCAGTAGATACTTTCCCGC 60.546 54.545 8.28 1.68 34.09 6.13
451 452 2.362717 GAGCAGTAGATACTTTCCCGCT 59.637 50.000 2.46 2.46 34.52 5.52
452 453 2.766828 AGCAGTAGATACTTTCCCGCTT 59.233 45.455 0.00 0.00 33.46 4.68
453 454 2.866762 GCAGTAGATACTTTCCCGCTTG 59.133 50.000 0.00 0.00 33.46 4.01
454 455 2.866762 CAGTAGATACTTTCCCGCTTGC 59.133 50.000 0.00 0.00 33.46 4.01
455 456 1.859080 GTAGATACTTTCCCGCTTGCG 59.141 52.381 8.14 8.14 0.00 4.85
456 457 0.249398 AGATACTTTCCCGCTTGCGT 59.751 50.000 13.97 0.00 0.00 5.24
457 458 0.651031 GATACTTTCCCGCTTGCGTC 59.349 55.000 13.97 0.00 0.00 5.19
458 459 0.249398 ATACTTTCCCGCTTGCGTCT 59.751 50.000 13.97 0.00 0.00 4.18
459 460 0.669318 TACTTTCCCGCTTGCGTCTG 60.669 55.000 13.97 2.59 0.00 3.51
460 461 1.961277 CTTTCCCGCTTGCGTCTGT 60.961 57.895 13.97 0.00 0.00 3.41
461 462 0.669318 CTTTCCCGCTTGCGTCTGTA 60.669 55.000 13.97 0.00 0.00 2.74
462 463 0.947180 TTTCCCGCTTGCGTCTGTAC 60.947 55.000 13.97 0.00 0.00 2.90
463 464 1.812686 TTCCCGCTTGCGTCTGTACT 61.813 55.000 13.97 0.00 0.00 2.73
464 465 2.094659 CCCGCTTGCGTCTGTACTG 61.095 63.158 13.97 0.00 0.00 2.74
465 466 1.372997 CCGCTTGCGTCTGTACTGT 60.373 57.895 13.97 0.00 0.00 3.55
466 467 0.109458 CCGCTTGCGTCTGTACTGTA 60.109 55.000 13.97 0.00 0.00 2.74
467 468 1.469251 CCGCTTGCGTCTGTACTGTAT 60.469 52.381 13.97 0.00 0.00 2.29
468 469 2.259618 CGCTTGCGTCTGTACTGTATT 58.740 47.619 6.86 0.00 0.00 1.89
469 470 3.431856 CGCTTGCGTCTGTACTGTATTA 58.568 45.455 6.86 0.00 0.00 0.98
470 471 3.855379 CGCTTGCGTCTGTACTGTATTAA 59.145 43.478 6.86 0.00 0.00 1.40
471 472 4.325204 CGCTTGCGTCTGTACTGTATTAAA 59.675 41.667 6.86 0.00 0.00 1.52
472 473 5.164031 CGCTTGCGTCTGTACTGTATTAAAA 60.164 40.000 6.86 0.00 0.00 1.52
473 474 6.595794 GCTTGCGTCTGTACTGTATTAAAAA 58.404 36.000 0.00 0.00 0.00 1.94
499 500 7.765695 ACCATTATTATACTTGCTCCATTGG 57.234 36.000 0.00 0.00 0.00 3.16
500 501 7.526041 ACCATTATTATACTTGCTCCATTGGA 58.474 34.615 5.05 5.05 0.00 3.53
547 548 6.202762 TGCTACTTGTTTTGACTCATGTACAG 59.797 38.462 0.33 0.00 0.00 2.74
552 553 4.509970 TGTTTTGACTCATGTACAGGAACG 59.490 41.667 11.87 3.51 0.00 3.95
560 561 3.007074 TCATGTACAGGAACGTTGCCTTA 59.993 43.478 16.78 5.05 32.12 2.69
578 579 4.561530 GCCTTATGTTATCAGGCGAGATCA 60.562 45.833 0.00 0.00 35.86 2.92
593 594 4.493220 GCGAGATCAGTGTCAACTTTATGC 60.493 45.833 0.00 0.00 32.98 3.14
608 611 8.592809 TCAACTTTATGCCAAGGAAAAATATGT 58.407 29.630 0.00 0.00 0.00 2.29
643 646 4.218200 TGGAAATGGACACAGCAACTAATG 59.782 41.667 0.00 0.00 0.00 1.90
658 661 6.757897 CAACTAATGCTTGTCCCTAATTCA 57.242 37.500 0.00 0.00 0.00 2.57
659 662 7.156876 CAACTAATGCTTGTCCCTAATTCAA 57.843 36.000 0.00 0.00 0.00 2.69
660 663 7.601856 CAACTAATGCTTGTCCCTAATTCAAA 58.398 34.615 0.00 0.00 0.00 2.69
661 664 7.775053 ACTAATGCTTGTCCCTAATTCAAAA 57.225 32.000 0.00 0.00 0.00 2.44
662 665 8.189119 ACTAATGCTTGTCCCTAATTCAAAAA 57.811 30.769 0.00 0.00 0.00 1.94
697 700 2.957491 TGTCCCTGCAACACAAAAAG 57.043 45.000 0.00 0.00 0.00 2.27
700 703 3.259374 TGTCCCTGCAACACAAAAAGAAA 59.741 39.130 0.00 0.00 0.00 2.52
701 704 4.249661 GTCCCTGCAACACAAAAAGAAAA 58.750 39.130 0.00 0.00 0.00 2.29
702 705 4.693095 GTCCCTGCAACACAAAAAGAAAAA 59.307 37.500 0.00 0.00 0.00 1.94
703 706 4.693095 TCCCTGCAACACAAAAAGAAAAAC 59.307 37.500 0.00 0.00 0.00 2.43
704 707 4.142708 CCCTGCAACACAAAAAGAAAAACC 60.143 41.667 0.00 0.00 0.00 3.27
705 708 4.142708 CCTGCAACACAAAAAGAAAAACCC 60.143 41.667 0.00 0.00 0.00 4.11
706 709 4.389374 TGCAACACAAAAAGAAAAACCCA 58.611 34.783 0.00 0.00 0.00 4.51
707 710 4.821805 TGCAACACAAAAAGAAAAACCCAA 59.178 33.333 0.00 0.00 0.00 4.12
708 711 5.150683 GCAACACAAAAAGAAAAACCCAAC 58.849 37.500 0.00 0.00 0.00 3.77
710 713 4.633175 ACACAAAAAGAAAAACCCAACGT 58.367 34.783 0.00 0.00 0.00 3.99
711 714 5.057819 ACACAAAAAGAAAAACCCAACGTT 58.942 33.333 0.00 0.00 35.70 3.99
712 715 6.221659 ACACAAAAAGAAAAACCCAACGTTA 58.778 32.000 0.00 0.00 33.05 3.18
819 822 0.602638 TCCGTCCATGTCTTGTGTGC 60.603 55.000 0.00 0.00 0.00 4.57
834 837 0.867746 TGTGCGCACAAGATCACTTC 59.132 50.000 39.13 10.12 38.56 3.01
839 842 2.413371 GCGCACAAGATCACTTCCTTTC 60.413 50.000 0.30 0.00 33.70 2.62
860 863 0.748005 CCAGGGTTTGGTGGCGATAG 60.748 60.000 0.00 0.00 42.41 2.08
876 879 7.402640 GTGGCGATAGAGAAAATAAAGTTGAG 58.597 38.462 0.00 0.00 39.76 3.02
878 881 6.423042 GCGATAGAGAAAATAAAGTTGAGGC 58.577 40.000 0.00 0.00 39.76 4.70
880 883 4.686839 AGAGAAAATAAAGTTGAGGCGC 57.313 40.909 0.00 0.00 0.00 6.53
988 1007 2.064581 CCTGACCCCCGACCTAAGG 61.065 68.421 0.00 0.00 0.00 2.69
1035 1054 1.151777 AACACAACACCAGCTCGACG 61.152 55.000 0.00 0.00 0.00 5.12
1036 1055 2.661866 ACAACACCAGCTCGACGC 60.662 61.111 0.00 0.00 39.57 5.19
1042 1061 4.838486 CCAGCTCGACGCCTCGAC 62.838 72.222 3.56 2.39 44.14 4.20
1413 1434 0.898789 TCCCAGGGTTCTGAGACGAC 60.899 60.000 5.01 0.00 43.49 4.34
1414 1435 1.213013 CCAGGGTTCTGAGACGACG 59.787 63.158 0.00 0.00 43.49 5.12
1415 1436 1.241990 CCAGGGTTCTGAGACGACGA 61.242 60.000 0.00 0.00 43.49 4.20
1420 1441 2.520979 GGTTCTGAGACGACGATCAAG 58.479 52.381 0.00 0.76 0.00 3.02
1436 1457 7.219484 ACGATCAAGGATGATGTTTCTTTTT 57.781 32.000 0.00 0.00 46.30 1.94
1457 1478 1.402456 GCTCTTCGCTCCTCGTGTTTA 60.402 52.381 0.00 0.00 39.67 2.01
1458 1479 2.735762 GCTCTTCGCTCCTCGTGTTTAT 60.736 50.000 0.00 0.00 39.67 1.40
1460 1481 3.921677 TCTTCGCTCCTCGTGTTTATTT 58.078 40.909 0.00 0.00 39.67 1.40
1461 1482 4.312443 TCTTCGCTCCTCGTGTTTATTTT 58.688 39.130 0.00 0.00 39.67 1.82
1462 1483 4.387862 TCTTCGCTCCTCGTGTTTATTTTC 59.612 41.667 0.00 0.00 39.67 2.29
1463 1484 3.921677 TCGCTCCTCGTGTTTATTTTCT 58.078 40.909 0.00 0.00 39.67 2.52
1464 1485 3.924686 TCGCTCCTCGTGTTTATTTTCTC 59.075 43.478 0.00 0.00 39.67 2.87
1465 1486 3.062234 CGCTCCTCGTGTTTATTTTCTCC 59.938 47.826 0.00 0.00 0.00 3.71
1466 1487 4.254492 GCTCCTCGTGTTTATTTTCTCCT 58.746 43.478 0.00 0.00 0.00 3.69
1467 1488 4.695928 GCTCCTCGTGTTTATTTTCTCCTT 59.304 41.667 0.00 0.00 0.00 3.36
1468 1489 5.181433 GCTCCTCGTGTTTATTTTCTCCTTT 59.819 40.000 0.00 0.00 0.00 3.11
1469 1490 6.554334 TCCTCGTGTTTATTTTCTCCTTTG 57.446 37.500 0.00 0.00 0.00 2.77
1470 1491 6.292923 TCCTCGTGTTTATTTTCTCCTTTGA 58.707 36.000 0.00 0.00 0.00 2.69
1471 1492 6.768861 TCCTCGTGTTTATTTTCTCCTTTGAA 59.231 34.615 0.00 0.00 0.00 2.69
1472 1493 7.283580 TCCTCGTGTTTATTTTCTCCTTTGAAA 59.716 33.333 0.00 0.00 34.55 2.69
1480 1501 4.439305 TTTCTCCTTTGAAATGATGGCG 57.561 40.909 0.00 0.00 31.81 5.69
1558 1580 2.342650 GCGAATGGGCTCCTGCAAA 61.343 57.895 0.00 0.00 41.91 3.68
1617 1639 6.663093 TGTGGGTGTAAATAAGAAGCATGATT 59.337 34.615 0.00 0.00 0.00 2.57
1619 1641 6.096705 TGGGTGTAAATAAGAAGCATGATTGG 59.903 38.462 0.00 0.00 0.00 3.16
1660 1683 4.036941 TGGATACATATGCATGCATGGT 57.963 40.909 37.43 33.24 46.17 3.55
1661 1684 3.759618 TGGATACATATGCATGCATGGTG 59.240 43.478 37.43 33.37 46.17 4.17
1669 1692 2.996631 TGCATGCATGGTGTGTGTATA 58.003 42.857 27.34 0.00 0.00 1.47
1670 1693 3.553904 TGCATGCATGGTGTGTGTATAT 58.446 40.909 27.34 0.00 0.00 0.86
1671 1694 4.712476 TGCATGCATGGTGTGTGTATATA 58.288 39.130 27.34 0.00 0.00 0.86
1672 1695 5.315348 TGCATGCATGGTGTGTGTATATAT 58.685 37.500 27.34 0.00 0.00 0.86
1673 1696 6.471146 TGCATGCATGGTGTGTGTATATATA 58.529 36.000 27.34 0.00 0.00 0.86
1674 1697 7.111466 TGCATGCATGGTGTGTGTATATATAT 58.889 34.615 27.34 0.00 0.00 0.86
1675 1698 8.263640 TGCATGCATGGTGTGTGTATATATATA 58.736 33.333 27.34 0.00 0.00 0.86
1676 1699 9.276590 GCATGCATGGTGTGTGTATATATATAT 57.723 33.333 27.34 10.10 0.00 0.86
1708 1731 6.425114 GTGTATTATACTCACTGCATGGAAGG 59.575 42.308 3.92 0.00 0.00 3.46
1722 1745 5.188555 TGCATGGAAGGTTGGCAAAATATTA 59.811 36.000 0.00 0.00 0.00 0.98
1756 1781 4.672587 TTATCCATCGCTGTAAAGCTCT 57.327 40.909 2.78 0.00 0.00 4.09
1757 1782 5.784578 TTATCCATCGCTGTAAAGCTCTA 57.215 39.130 2.78 0.00 0.00 2.43
1758 1783 3.438297 TCCATCGCTGTAAAGCTCTAC 57.562 47.619 2.78 0.00 0.00 2.59
1759 1784 3.024547 TCCATCGCTGTAAAGCTCTACT 58.975 45.455 2.78 0.00 0.00 2.57
1760 1785 3.066900 TCCATCGCTGTAAAGCTCTACTC 59.933 47.826 2.78 0.00 0.00 2.59
1761 1786 3.376540 CATCGCTGTAAAGCTCTACTCC 58.623 50.000 2.78 0.00 0.00 3.85
1762 1787 1.400846 TCGCTGTAAAGCTCTACTCCG 59.599 52.381 2.78 1.73 0.00 4.63
1763 1788 1.562017 GCTGTAAAGCTCTACTCCGC 58.438 55.000 0.00 0.00 0.00 5.54
1764 1789 1.828832 CTGTAAAGCTCTACTCCGCG 58.171 55.000 0.00 0.00 0.00 6.46
1765 1790 1.400846 CTGTAAAGCTCTACTCCGCGA 59.599 52.381 8.23 0.00 0.00 5.87
1766 1791 1.131883 TGTAAAGCTCTACTCCGCGAC 59.868 52.381 8.23 0.00 0.00 5.19
1767 1792 1.401199 GTAAAGCTCTACTCCGCGACT 59.599 52.381 8.23 0.00 0.00 4.18
1900 1942 6.540438 TTCGACCATACACTAATCTTTCCT 57.460 37.500 0.00 0.00 0.00 3.36
1901 1943 5.902681 TCGACCATACACTAATCTTTCCTG 58.097 41.667 0.00 0.00 0.00 3.86
1904 1946 6.816640 CGACCATACACTAATCTTTCCTGAAA 59.183 38.462 0.00 0.00 0.00 2.69
1905 1947 7.010552 CGACCATACACTAATCTTTCCTGAAAG 59.989 40.741 12.40 12.40 46.82 2.62
1940 1982 9.881529 TTTTGTAATGAATACTTCGGTTAACAC 57.118 29.630 8.10 0.00 35.42 3.32
1941 1983 7.280730 TGTAATGAATACTTCGGTTAACACG 57.719 36.000 8.10 8.86 35.42 4.49
1942 1984 7.089538 TGTAATGAATACTTCGGTTAACACGA 58.910 34.615 8.10 11.05 35.28 4.35
1943 1985 7.598118 TGTAATGAATACTTCGGTTAACACGAA 59.402 33.333 22.14 22.14 46.17 3.85
1952 1994 6.419980 TTCGGTTAACACGAAGAAAAAGAA 57.580 33.333 20.67 3.86 44.41 2.52
1953 1995 6.419980 TCGGTTAACACGAAGAAAAAGAAA 57.580 33.333 14.24 0.00 37.42 2.52
1954 1996 6.250089 TCGGTTAACACGAAGAAAAAGAAAC 58.750 36.000 14.24 0.00 37.42 2.78
1955 1997 5.453266 CGGTTAACACGAAGAAAAAGAAACC 59.547 40.000 8.10 0.00 0.00 3.27
1956 1998 5.453266 GGTTAACACGAAGAAAAAGAAACCG 59.547 40.000 8.10 0.00 0.00 4.44
1957 1999 3.060978 ACACGAAGAAAAAGAAACCGC 57.939 42.857 0.00 0.00 0.00 5.68
1958 2000 2.681344 ACACGAAGAAAAAGAAACCGCT 59.319 40.909 0.00 0.00 0.00 5.52
1959 2001 3.128068 ACACGAAGAAAAAGAAACCGCTT 59.872 39.130 0.00 0.00 0.00 4.68
1960 2002 4.102649 CACGAAGAAAAAGAAACCGCTTT 58.897 39.130 0.00 0.00 39.65 3.51
1961 2003 4.561213 CACGAAGAAAAAGAAACCGCTTTT 59.439 37.500 0.00 0.00 46.81 2.27
1962 2004 5.740099 CACGAAGAAAAAGAAACCGCTTTTA 59.260 36.000 0.00 0.00 44.79 1.52
1963 2005 6.416750 CACGAAGAAAAAGAAACCGCTTTTAT 59.583 34.615 0.00 0.00 44.79 1.40
1964 2006 6.416750 ACGAAGAAAAAGAAACCGCTTTTATG 59.583 34.615 0.00 0.00 44.79 1.90
1965 2007 6.635239 CGAAGAAAAAGAAACCGCTTTTATGA 59.365 34.615 0.00 0.00 44.79 2.15
1966 2008 7.357287 CGAAGAAAAAGAAACCGCTTTTATGAC 60.357 37.037 0.00 0.00 44.79 3.06
1967 2009 5.912955 AGAAAAAGAAACCGCTTTTATGACG 59.087 36.000 0.00 0.00 44.79 4.35
1971 2013 3.107447 CCGCTTTTATGACGGGCC 58.893 61.111 0.00 0.00 43.23 5.80
1972 2014 2.707039 CGCTTTTATGACGGGCCG 59.293 61.111 27.06 27.06 0.00 6.13
1973 2015 1.812093 CGCTTTTATGACGGGCCGA 60.812 57.895 35.78 12.34 0.00 5.54
1974 2016 1.363145 CGCTTTTATGACGGGCCGAA 61.363 55.000 35.78 20.93 0.00 4.30
1975 2017 0.806241 GCTTTTATGACGGGCCGAAA 59.194 50.000 35.78 19.74 0.00 3.46
1976 2018 1.404035 GCTTTTATGACGGGCCGAAAT 59.596 47.619 35.78 25.66 0.00 2.17
1977 2019 2.614983 GCTTTTATGACGGGCCGAAATA 59.385 45.455 35.78 24.59 0.00 1.40
1978 2020 3.303791 GCTTTTATGACGGGCCGAAATAG 60.304 47.826 35.78 22.24 0.00 1.73
1979 2021 2.536761 TTATGACGGGCCGAAATAGG 57.463 50.000 35.78 0.83 0.00 2.57
1980 2022 1.707106 TATGACGGGCCGAAATAGGA 58.293 50.000 35.78 7.66 0.00 2.94
1981 2023 0.393077 ATGACGGGCCGAAATAGGAG 59.607 55.000 35.78 0.00 0.00 3.69
1982 2024 0.685131 TGACGGGCCGAAATAGGAGA 60.685 55.000 35.78 1.65 0.00 3.71
1983 2025 0.462789 GACGGGCCGAAATAGGAGAA 59.537 55.000 35.78 0.00 0.00 2.87
1984 2026 0.177373 ACGGGCCGAAATAGGAGAAC 59.823 55.000 35.78 0.00 0.00 3.01
1985 2027 0.177141 CGGGCCGAAATAGGAGAACA 59.823 55.000 24.41 0.00 0.00 3.18
1986 2028 1.202651 CGGGCCGAAATAGGAGAACAT 60.203 52.381 24.41 0.00 0.00 2.71
1987 2029 2.036733 CGGGCCGAAATAGGAGAACATA 59.963 50.000 24.41 0.00 0.00 2.29
1988 2030 3.665190 GGGCCGAAATAGGAGAACATAG 58.335 50.000 0.00 0.00 0.00 2.23
1989 2031 3.067833 GGCCGAAATAGGAGAACATAGC 58.932 50.000 0.00 0.00 0.00 2.97
1990 2032 3.244249 GGCCGAAATAGGAGAACATAGCT 60.244 47.826 0.00 0.00 0.00 3.32
1991 2033 4.021368 GGCCGAAATAGGAGAACATAGCTA 60.021 45.833 0.00 0.00 0.00 3.32
1992 2034 5.337652 GGCCGAAATAGGAGAACATAGCTAT 60.338 44.000 0.00 0.00 0.00 2.97
1993 2035 5.578727 GCCGAAATAGGAGAACATAGCTATG 59.421 44.000 28.38 28.38 39.55 2.23
2005 2047 5.413309 ACATAGCTATGTTAGGGCATCTC 57.587 43.478 29.70 0.00 43.99 2.75
2006 2048 4.223923 ACATAGCTATGTTAGGGCATCTCC 59.776 45.833 29.70 0.00 43.99 3.71
2007 2049 2.694397 AGCTATGTTAGGGCATCTCCA 58.306 47.619 0.00 0.00 36.21 3.86
2008 2050 2.636893 AGCTATGTTAGGGCATCTCCAG 59.363 50.000 0.00 0.00 36.21 3.86
2009 2051 2.873649 GCTATGTTAGGGCATCTCCAGC 60.874 54.545 0.00 0.00 36.21 4.85
2034 2076 4.052518 CCAACAGGCCCTCCCCAG 62.053 72.222 0.00 0.00 0.00 4.45
2035 2077 4.052518 CAACAGGCCCTCCCCAGG 62.053 72.222 0.00 0.00 39.98 4.45
2041 2083 4.129148 GCCCTCCCCAGGCGATTT 62.129 66.667 0.00 0.00 41.41 2.17
2042 2084 2.683475 CCCTCCCCAGGCGATTTT 59.317 61.111 0.00 0.00 38.72 1.82
2043 2085 1.754234 CCCTCCCCAGGCGATTTTG 60.754 63.158 0.00 0.00 38.72 2.44
2044 2086 2.418083 CCTCCCCAGGCGATTTTGC 61.418 63.158 0.00 0.00 30.98 3.68
2075 2117 2.983592 AAAAAGGCCCCAGTCGCG 60.984 61.111 0.00 0.00 0.00 5.87
2092 2134 4.678743 GCCCCCAGAAGCCCGTTT 62.679 66.667 0.00 0.00 0.00 3.60
2093 2135 2.117423 CCCCCAGAAGCCCGTTTT 59.883 61.111 0.00 0.00 0.00 2.43
2094 2136 1.533033 CCCCCAGAAGCCCGTTTTT 60.533 57.895 0.00 0.00 0.00 1.94
2095 2137 1.532604 CCCCCAGAAGCCCGTTTTTC 61.533 60.000 0.00 0.00 0.00 2.29
2096 2138 1.579429 CCCAGAAGCCCGTTTTTCG 59.421 57.895 0.00 0.00 39.52 3.46
2097 2139 1.081442 CCAGAAGCCCGTTTTTCGC 60.081 57.895 0.00 0.00 38.35 4.70
2098 2140 1.081442 CAGAAGCCCGTTTTTCGCC 60.081 57.895 0.00 0.00 38.35 5.54
2099 2141 2.127003 GAAGCCCGTTTTTCGCCG 60.127 61.111 0.00 0.00 38.35 6.46
2100 2142 3.604494 GAAGCCCGTTTTTCGCCGG 62.604 63.158 0.00 0.00 43.82 6.13
2103 2145 4.097863 CCCGTTTTTCGCCGGCTC 62.098 66.667 26.68 6.70 42.87 4.70
2104 2146 4.439472 CCGTTTTTCGCCGGCTCG 62.439 66.667 26.68 17.41 37.43 5.03
2117 2159 2.597510 GCTCGGGCCAAAACTGGT 60.598 61.111 4.39 0.00 0.00 4.00
2118 2160 2.919494 GCTCGGGCCAAAACTGGTG 61.919 63.158 4.39 0.00 0.00 4.17
2119 2161 1.528309 CTCGGGCCAAAACTGGTGT 60.528 57.895 4.39 0.00 0.00 4.16
2120 2162 1.515521 CTCGGGCCAAAACTGGTGTC 61.516 60.000 4.39 0.00 0.00 3.67
2121 2163 2.903547 CGGGCCAAAACTGGTGTCG 61.904 63.158 4.39 0.00 0.00 4.35
2122 2164 2.561037 GGGCCAAAACTGGTGTCGG 61.561 63.158 4.39 0.00 0.00 4.79
2123 2165 2.335011 GCCAAAACTGGTGTCGGC 59.665 61.111 0.00 0.00 0.00 5.54
2124 2166 2.637025 CCAAAACTGGTGTCGGCG 59.363 61.111 0.00 0.00 0.00 6.46
2125 2167 2.637025 CAAAACTGGTGTCGGCGG 59.363 61.111 7.21 0.00 0.00 6.13
2126 2168 1.890041 CAAAACTGGTGTCGGCGGA 60.890 57.895 7.21 0.00 0.00 5.54
2127 2169 1.890510 AAAACTGGTGTCGGCGGAC 60.891 57.895 16.90 16.90 43.71 4.79
2128 2170 3.819877 AAACTGGTGTCGGCGGACC 62.820 63.158 20.34 18.54 42.73 4.46
2174 2216 4.033776 CTTGGGGAGCCGGCAGAA 62.034 66.667 31.54 12.04 0.00 3.02
2175 2217 3.984193 CTTGGGGAGCCGGCAGAAG 62.984 68.421 31.54 17.58 0.00 2.85
2179 2221 4.760047 GGAGCCGGCAGAAGCGAA 62.760 66.667 31.54 0.00 43.41 4.70
2180 2222 2.742372 GAGCCGGCAGAAGCGAAA 60.742 61.111 31.54 0.00 43.41 3.46
2181 2223 2.281484 AGCCGGCAGAAGCGAAAA 60.281 55.556 31.54 0.00 43.41 2.29
2182 2224 1.852067 GAGCCGGCAGAAGCGAAAAA 61.852 55.000 31.54 0.00 43.41 1.94
2183 2225 1.442688 GCCGGCAGAAGCGAAAAAG 60.443 57.895 24.80 0.00 43.41 2.27
2184 2226 1.210155 CCGGCAGAAGCGAAAAAGG 59.790 57.895 0.00 0.00 43.41 3.11
2185 2227 1.442688 CGGCAGAAGCGAAAAAGGC 60.443 57.895 0.00 0.00 43.41 4.35
2186 2228 1.442688 GGCAGAAGCGAAAAAGGCG 60.443 57.895 0.00 0.00 43.41 5.52
2223 2265 3.431725 CGCACCGAGGGCCTTTTC 61.432 66.667 7.89 0.00 0.00 2.29
2224 2266 3.062466 GCACCGAGGGCCTTTTCC 61.062 66.667 7.89 0.00 0.00 3.13
2225 2267 2.361230 CACCGAGGGCCTTTTCCC 60.361 66.667 7.89 0.00 46.93 3.97
2232 2274 3.299977 GGCCTTTTCCCGCCGTTT 61.300 61.111 0.00 0.00 34.94 3.60
2233 2275 2.257371 GCCTTTTCCCGCCGTTTC 59.743 61.111 0.00 0.00 0.00 2.78
2234 2276 2.265904 GCCTTTTCCCGCCGTTTCT 61.266 57.895 0.00 0.00 0.00 2.52
2235 2277 1.802337 GCCTTTTCCCGCCGTTTCTT 61.802 55.000 0.00 0.00 0.00 2.52
2236 2278 0.039527 CCTTTTCCCGCCGTTTCTTG 60.040 55.000 0.00 0.00 0.00 3.02
2237 2279 0.948678 CTTTTCCCGCCGTTTCTTGA 59.051 50.000 0.00 0.00 0.00 3.02
2238 2280 0.664224 TTTTCCCGCCGTTTCTTGAC 59.336 50.000 0.00 0.00 0.00 3.18
2239 2281 1.500512 TTTCCCGCCGTTTCTTGACG 61.501 55.000 0.00 0.00 42.43 4.35
2240 2282 4.084888 CCCGCCGTTTCTTGACGC 62.085 66.667 0.00 0.00 41.50 5.19
2241 2283 3.041940 CCGCCGTTTCTTGACGCT 61.042 61.111 0.00 0.00 41.50 5.07
2242 2284 2.604174 CCGCCGTTTCTTGACGCTT 61.604 57.895 0.00 0.00 41.50 4.68
2243 2285 1.278637 CGCCGTTTCTTGACGCTTT 59.721 52.632 0.00 0.00 41.50 3.51
2244 2286 0.316689 CGCCGTTTCTTGACGCTTTT 60.317 50.000 0.00 0.00 41.50 2.27
2245 2287 1.395670 GCCGTTTCTTGACGCTTTTC 58.604 50.000 0.00 0.00 41.50 2.29
2246 2288 1.924629 GCCGTTTCTTGACGCTTTTCC 60.925 52.381 0.00 0.00 41.50 3.13
2247 2289 1.334689 CCGTTTCTTGACGCTTTTCCC 60.335 52.381 0.00 0.00 41.50 3.97
2248 2290 1.602377 CGTTTCTTGACGCTTTTCCCT 59.398 47.619 0.00 0.00 36.12 4.20
2249 2291 2.349532 CGTTTCTTGACGCTTTTCCCTC 60.350 50.000 0.00 0.00 36.12 4.30
2250 2292 1.508632 TTCTTGACGCTTTTCCCTCG 58.491 50.000 0.00 0.00 0.00 4.63
2251 2293 0.949105 TCTTGACGCTTTTCCCTCGC 60.949 55.000 0.00 0.00 0.00 5.03
2252 2294 1.227704 TTGACGCTTTTCCCTCGCA 60.228 52.632 0.00 0.00 0.00 5.10
2253 2295 0.605319 TTGACGCTTTTCCCTCGCAT 60.605 50.000 0.00 0.00 0.00 4.73
2254 2296 1.019278 TGACGCTTTTCCCTCGCATC 61.019 55.000 0.00 0.00 0.00 3.91
2255 2297 0.741221 GACGCTTTTCCCTCGCATCT 60.741 55.000 0.00 0.00 0.00 2.90
2256 2298 0.741221 ACGCTTTTCCCTCGCATCTC 60.741 55.000 0.00 0.00 0.00 2.75
2257 2299 0.460987 CGCTTTTCCCTCGCATCTCT 60.461 55.000 0.00 0.00 0.00 3.10
2258 2300 1.294857 GCTTTTCCCTCGCATCTCTC 58.705 55.000 0.00 0.00 0.00 3.20
2259 2301 1.946745 CTTTTCCCTCGCATCTCTCC 58.053 55.000 0.00 0.00 0.00 3.71
2260 2302 0.541863 TTTTCCCTCGCATCTCTCCC 59.458 55.000 0.00 0.00 0.00 4.30
2261 2303 1.676678 TTTCCCTCGCATCTCTCCCG 61.677 60.000 0.00 0.00 0.00 5.14
2262 2304 4.292178 CCCTCGCATCTCTCCCGC 62.292 72.222 0.00 0.00 0.00 6.13
2263 2305 3.222855 CCTCGCATCTCTCCCGCT 61.223 66.667 0.00 0.00 0.00 5.52
2264 2306 2.334653 CTCGCATCTCTCCCGCTC 59.665 66.667 0.00 0.00 0.00 5.03
2265 2307 3.534970 CTCGCATCTCTCCCGCTCG 62.535 68.421 0.00 0.00 0.00 5.03
2267 2309 3.910490 GCATCTCTCCCGCTCGCT 61.910 66.667 0.00 0.00 0.00 4.93
2268 2310 2.334653 CATCTCTCCCGCTCGCTC 59.665 66.667 0.00 0.00 0.00 5.03
2269 2311 3.283684 ATCTCTCCCGCTCGCTCG 61.284 66.667 0.00 0.00 0.00 5.03
2278 2320 4.882396 GCTCGCTCGCTTCCCTCC 62.882 72.222 0.00 0.00 0.00 4.30
2279 2321 4.214327 CTCGCTCGCTTCCCTCCC 62.214 72.222 0.00 0.00 0.00 4.30
2285 2327 4.489771 CGCTTCCCTCCCGCCATT 62.490 66.667 0.00 0.00 0.00 3.16
2286 2328 2.517166 GCTTCCCTCCCGCCATTC 60.517 66.667 0.00 0.00 0.00 2.67
2287 2329 3.049080 GCTTCCCTCCCGCCATTCT 62.049 63.158 0.00 0.00 0.00 2.40
2288 2330 1.147153 CTTCCCTCCCGCCATTCTC 59.853 63.158 0.00 0.00 0.00 2.87
2289 2331 1.306997 TTCCCTCCCGCCATTCTCT 60.307 57.895 0.00 0.00 0.00 3.10
2290 2332 1.338136 TTCCCTCCCGCCATTCTCTC 61.338 60.000 0.00 0.00 0.00 3.20
2291 2333 2.812619 CCCTCCCGCCATTCTCTCC 61.813 68.421 0.00 0.00 0.00 3.71
2292 2334 2.812619 CCTCCCGCCATTCTCTCCC 61.813 68.421 0.00 0.00 0.00 4.30
2293 2335 1.764054 CTCCCGCCATTCTCTCCCT 60.764 63.158 0.00 0.00 0.00 4.20
2294 2336 1.306997 TCCCGCCATTCTCTCCCTT 60.307 57.895 0.00 0.00 0.00 3.95
2295 2337 0.914417 TCCCGCCATTCTCTCCCTTT 60.914 55.000 0.00 0.00 0.00 3.11
2296 2338 0.464554 CCCGCCATTCTCTCCCTTTC 60.465 60.000 0.00 0.00 0.00 2.62
2297 2339 0.543749 CCGCCATTCTCTCCCTTTCT 59.456 55.000 0.00 0.00 0.00 2.52
2298 2340 1.474143 CCGCCATTCTCTCCCTTTCTC 60.474 57.143 0.00 0.00 0.00 2.87
2299 2341 1.474143 CGCCATTCTCTCCCTTTCTCC 60.474 57.143 0.00 0.00 0.00 3.71
2300 2342 1.133945 GCCATTCTCTCCCTTTCTCCC 60.134 57.143 0.00 0.00 0.00 4.30
2301 2343 1.139853 CCATTCTCTCCCTTTCTCCCG 59.860 57.143 0.00 0.00 0.00 5.14
2302 2344 0.833949 ATTCTCTCCCTTTCTCCCGC 59.166 55.000 0.00 0.00 0.00 6.13
2303 2345 1.265454 TTCTCTCCCTTTCTCCCGCC 61.265 60.000 0.00 0.00 0.00 6.13
2304 2346 1.990060 CTCTCCCTTTCTCCCGCCA 60.990 63.158 0.00 0.00 0.00 5.69
2305 2347 1.537889 TCTCCCTTTCTCCCGCCAA 60.538 57.895 0.00 0.00 0.00 4.52
2306 2348 1.131303 TCTCCCTTTCTCCCGCCAAA 61.131 55.000 0.00 0.00 0.00 3.28
2307 2349 0.960861 CTCCCTTTCTCCCGCCAAAC 60.961 60.000 0.00 0.00 0.00 2.93
2308 2350 1.977009 CCCTTTCTCCCGCCAAACC 60.977 63.158 0.00 0.00 0.00 3.27
2309 2351 1.074951 CCTTTCTCCCGCCAAACCT 59.925 57.895 0.00 0.00 0.00 3.50
2310 2352 0.960861 CCTTTCTCCCGCCAAACCTC 60.961 60.000 0.00 0.00 0.00 3.85
2311 2353 0.960861 CTTTCTCCCGCCAAACCTCC 60.961 60.000 0.00 0.00 0.00 4.30
2312 2354 1.423794 TTTCTCCCGCCAAACCTCCT 61.424 55.000 0.00 0.00 0.00 3.69
2313 2355 1.838073 TTCTCCCGCCAAACCTCCTC 61.838 60.000 0.00 0.00 0.00 3.71
2314 2356 3.327404 TCCCGCCAAACCTCCTCC 61.327 66.667 0.00 0.00 0.00 4.30
2315 2357 4.426313 CCCGCCAAACCTCCTCCC 62.426 72.222 0.00 0.00 0.00 4.30
2316 2358 4.778143 CCGCCAAACCTCCTCCCG 62.778 72.222 0.00 0.00 0.00 5.14
2318 2360 4.035102 GCCAAACCTCCTCCCGCT 62.035 66.667 0.00 0.00 0.00 5.52
2319 2361 2.269241 CCAAACCTCCTCCCGCTC 59.731 66.667 0.00 0.00 0.00 5.03
2320 2362 2.125512 CAAACCTCCTCCCGCTCG 60.126 66.667 0.00 0.00 0.00 5.03
2321 2363 4.083862 AAACCTCCTCCCGCTCGC 62.084 66.667 0.00 0.00 0.00 5.03
2333 2375 3.411351 GCTCGCCGCGAAGAAACA 61.411 61.111 17.53 0.00 34.74 2.83
2334 2376 2.470286 CTCGCCGCGAAGAAACAC 59.530 61.111 17.53 0.00 34.74 3.32
2335 2377 3.335259 CTCGCCGCGAAGAAACACG 62.335 63.158 17.53 0.00 34.74 4.49
2341 2383 4.440214 CGAAGAAACACGCCATGC 57.560 55.556 0.00 0.00 0.00 4.06
2342 2384 1.154225 CGAAGAAACACGCCATGCC 60.154 57.895 0.00 0.00 0.00 4.40
2343 2385 1.154225 GAAGAAACACGCCATGCCG 60.154 57.895 0.00 0.00 0.00 5.69
2344 2386 3.267597 AAGAAACACGCCATGCCGC 62.268 57.895 0.00 0.00 0.00 6.53
2345 2387 4.776647 GAAACACGCCATGCCGCC 62.777 66.667 0.00 0.00 0.00 6.13
2353 2395 4.473520 CCATGCCGCCGAGGAAGT 62.474 66.667 0.91 0.00 45.00 3.01
2354 2396 2.499205 CATGCCGCCGAGGAAGTA 59.501 61.111 0.91 0.00 45.00 2.24
2355 2397 1.883084 CATGCCGCCGAGGAAGTAC 60.883 63.158 0.91 0.00 45.00 2.73
2356 2398 3.426117 ATGCCGCCGAGGAAGTACG 62.426 63.158 0.91 0.00 45.00 3.67
2358 2400 4.867599 CCGCCGAGGAAGTACGCC 62.868 72.222 0.00 0.04 45.00 5.68
2359 2401 4.124351 CGCCGAGGAAGTACGCCA 62.124 66.667 9.95 0.00 0.00 5.69
2360 2402 2.499685 GCCGAGGAAGTACGCCAT 59.500 61.111 9.95 0.00 0.00 4.40
2361 2403 1.883084 GCCGAGGAAGTACGCCATG 60.883 63.158 9.95 0.00 0.00 3.66
2362 2404 1.515954 CCGAGGAAGTACGCCATGT 59.484 57.895 9.95 0.00 0.00 3.21
2363 2405 0.527817 CCGAGGAAGTACGCCATGTC 60.528 60.000 9.95 0.00 0.00 3.06
2364 2406 0.866061 CGAGGAAGTACGCCATGTCG 60.866 60.000 9.95 0.00 0.00 4.35
2365 2407 1.146358 GAGGAAGTACGCCATGTCGC 61.146 60.000 0.00 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.906073 AGCGCTCATATATACATGCATACA 58.094 37.500 2.64 0.00 0.00 2.29
1 2 6.643845 CAAGCGCTCATATATACATGCATAC 58.356 40.000 12.06 0.00 0.00 2.39
2 3 5.234972 GCAAGCGCTCATATATACATGCATA 59.765 40.000 12.06 0.00 34.30 3.14
3 4 4.034858 GCAAGCGCTCATATATACATGCAT 59.965 41.667 12.06 0.00 34.30 3.96
4 5 3.371898 GCAAGCGCTCATATATACATGCA 59.628 43.478 12.06 0.00 34.30 3.96
5 6 3.542875 CGCAAGCGCTCATATATACATGC 60.543 47.826 12.06 12.12 35.30 4.06
6 7 3.614176 ACGCAAGCGCTCATATATACATG 59.386 43.478 12.06 1.45 44.19 3.21
7 8 3.849911 ACGCAAGCGCTCATATATACAT 58.150 40.909 12.06 0.00 44.19 2.29
8 9 3.057526 AGACGCAAGCGCTCATATATACA 60.058 43.478 12.06 0.00 44.19 2.29
9 10 3.301906 CAGACGCAAGCGCTCATATATAC 59.698 47.826 12.06 0.00 44.19 1.47
10 11 3.501950 CAGACGCAAGCGCTCATATATA 58.498 45.455 12.06 0.00 44.19 0.86
11 12 2.332104 CAGACGCAAGCGCTCATATAT 58.668 47.619 12.06 0.00 44.19 0.86
12 13 1.602920 CCAGACGCAAGCGCTCATATA 60.603 52.381 12.06 0.00 44.19 0.86
13 14 0.877649 CCAGACGCAAGCGCTCATAT 60.878 55.000 12.06 0.00 44.19 1.78
14 15 1.519234 CCAGACGCAAGCGCTCATA 60.519 57.895 12.06 0.00 44.19 2.15
15 16 2.816958 CCAGACGCAAGCGCTCAT 60.817 61.111 12.06 0.00 44.19 2.90
17 18 4.742201 TCCCAGACGCAAGCGCTC 62.742 66.667 12.06 11.06 44.19 5.03
18 19 3.825160 TTTCCCAGACGCAAGCGCT 62.825 57.895 15.09 2.64 44.19 5.92
19 20 3.314388 CTTTCCCAGACGCAAGCGC 62.314 63.158 15.09 0.00 44.19 5.92
20 21 0.669318 TACTTTCCCAGACGCAAGCG 60.669 55.000 13.50 13.50 46.03 4.68
21 22 1.739067 ATACTTTCCCAGACGCAAGC 58.261 50.000 0.00 0.00 45.62 4.01
23 24 4.250464 CACTAATACTTTCCCAGACGCAA 58.750 43.478 0.00 0.00 0.00 4.85
24 25 3.857052 CACTAATACTTTCCCAGACGCA 58.143 45.455 0.00 0.00 0.00 5.24
25 26 2.608090 GCACTAATACTTTCCCAGACGC 59.392 50.000 0.00 0.00 0.00 5.19
26 27 4.113354 GAGCACTAATACTTTCCCAGACG 58.887 47.826 0.00 0.00 0.00 4.18
27 28 4.443621 GGAGCACTAATACTTTCCCAGAC 58.556 47.826 0.00 0.00 0.00 3.51
28 29 3.454812 GGGAGCACTAATACTTTCCCAGA 59.545 47.826 2.57 0.00 43.04 3.86
29 30 3.199946 TGGGAGCACTAATACTTTCCCAG 59.800 47.826 5.97 0.00 46.94 4.45
30 31 3.926058 GGGAGCACTAATACTTTCCCA 57.074 47.619 2.57 0.00 43.04 4.37
31 32 3.433740 CCTGGGAGCACTAATACTTTCCC 60.434 52.174 0.40 0.40 43.67 3.97
32 33 3.809905 CCTGGGAGCACTAATACTTTCC 58.190 50.000 0.00 0.00 0.00 3.13
33 34 3.118223 AGCCTGGGAGCACTAATACTTTC 60.118 47.826 0.00 0.00 34.23 2.62
34 35 2.846827 AGCCTGGGAGCACTAATACTTT 59.153 45.455 0.00 0.00 34.23 2.66
35 36 2.482494 AGCCTGGGAGCACTAATACTT 58.518 47.619 0.00 0.00 34.23 2.24
36 37 2.171448 CAAGCCTGGGAGCACTAATACT 59.829 50.000 0.00 0.00 34.23 2.12
37 38 2.565841 CAAGCCTGGGAGCACTAATAC 58.434 52.381 0.00 0.00 34.23 1.89
38 39 1.490490 CCAAGCCTGGGAGCACTAATA 59.510 52.381 0.00 0.00 39.30 0.98
39 40 0.257039 CCAAGCCTGGGAGCACTAAT 59.743 55.000 0.00 0.00 39.30 1.73
40 41 1.685224 CCAAGCCTGGGAGCACTAA 59.315 57.895 0.00 0.00 39.30 2.24
41 42 3.403624 CCAAGCCTGGGAGCACTA 58.596 61.111 0.00 0.00 39.30 2.74
49 50 4.748144 GGAGCACCCCAAGCCTGG 62.748 72.222 0.00 0.00 43.10 4.45
60 61 3.842925 TTTGGAGCACCGGGAGCAC 62.843 63.158 21.10 15.32 39.42 4.40
61 62 2.905996 ATTTGGAGCACCGGGAGCA 61.906 57.895 21.10 2.67 39.42 4.26
62 63 2.044946 ATTTGGAGCACCGGGAGC 60.045 61.111 6.32 10.14 39.42 4.70
63 64 1.002134 ACATTTGGAGCACCGGGAG 60.002 57.895 6.32 0.00 39.42 4.30
64 65 1.002624 GACATTTGGAGCACCGGGA 60.003 57.895 6.32 0.00 39.42 5.14
65 66 2.046285 GGACATTTGGAGCACCGGG 61.046 63.158 6.32 0.00 39.42 5.73
66 67 2.398554 CGGACATTTGGAGCACCGG 61.399 63.158 0.00 0.00 39.42 5.28
67 68 0.953471 TTCGGACATTTGGAGCACCG 60.953 55.000 0.00 0.00 41.39 4.94
68 69 1.243902 TTTCGGACATTTGGAGCACC 58.756 50.000 0.00 0.00 0.00 5.01
69 70 3.049912 GTTTTTCGGACATTTGGAGCAC 58.950 45.455 0.00 0.00 0.00 4.40
70 71 2.690497 TGTTTTTCGGACATTTGGAGCA 59.310 40.909 0.00 0.00 0.00 4.26
71 72 3.363341 TGTTTTTCGGACATTTGGAGC 57.637 42.857 0.00 0.00 0.00 4.70
119 120 1.401409 CCGTCGATGTGCTGCATTTTT 60.401 47.619 5.27 0.00 38.06 1.94
120 121 0.168788 CCGTCGATGTGCTGCATTTT 59.831 50.000 5.27 0.00 38.06 1.82
121 122 0.673333 TCCGTCGATGTGCTGCATTT 60.673 50.000 5.27 0.00 38.06 2.32
122 123 0.673333 TTCCGTCGATGTGCTGCATT 60.673 50.000 5.27 0.00 38.06 3.56
123 124 1.079197 TTCCGTCGATGTGCTGCAT 60.079 52.632 5.27 0.00 41.24 3.96
124 125 2.027073 GTTCCGTCGATGTGCTGCA 61.027 57.895 0.00 0.00 0.00 4.41
125 126 1.361668 ATGTTCCGTCGATGTGCTGC 61.362 55.000 3.52 0.00 0.00 5.25
126 127 0.647410 GATGTTCCGTCGATGTGCTG 59.353 55.000 3.52 0.00 0.00 4.41
127 128 0.802222 CGATGTTCCGTCGATGTGCT 60.802 55.000 3.52 0.00 44.49 4.40
128 129 0.800683 TCGATGTTCCGTCGATGTGC 60.801 55.000 3.52 0.00 45.17 4.57
129 130 3.322526 TCGATGTTCCGTCGATGTG 57.677 52.632 3.52 0.00 45.17 3.21
134 135 1.064208 AGAGACATCGATGTTCCGTCG 59.936 52.381 30.46 2.94 41.95 5.12
135 136 2.853731 AGAGACATCGATGTTCCGTC 57.146 50.000 30.46 22.49 41.95 4.79
136 137 2.231478 ACAAGAGACATCGATGTTCCGT 59.769 45.455 30.46 22.32 41.95 4.69
137 138 2.854777 GACAAGAGACATCGATGTTCCG 59.145 50.000 30.46 21.82 41.95 4.30
138 139 3.614616 GTGACAAGAGACATCGATGTTCC 59.385 47.826 30.46 23.29 41.95 3.62
139 140 4.237724 TGTGACAAGAGACATCGATGTTC 58.762 43.478 30.46 25.63 41.95 3.18
140 141 4.257267 TGTGACAAGAGACATCGATGTT 57.743 40.909 30.46 20.01 41.95 2.71
141 142 3.942130 TGTGACAAGAGACATCGATGT 57.058 42.857 30.37 30.37 45.16 3.06
142 143 5.596268 TTTTGTGACAAGAGACATCGATG 57.404 39.130 23.68 23.68 0.00 3.84
143 144 6.808008 AATTTTGTGACAAGAGACATCGAT 57.192 33.333 0.00 0.00 0.00 3.59
144 145 6.259829 TGAAATTTTGTGACAAGAGACATCGA 59.740 34.615 0.00 0.00 0.00 3.59
145 146 6.429624 TGAAATTTTGTGACAAGAGACATCG 58.570 36.000 0.00 0.00 0.00 3.84
146 147 8.633075 TTTGAAATTTTGTGACAAGAGACATC 57.367 30.769 0.00 0.00 0.00 3.06
147 148 9.252962 GATTTGAAATTTTGTGACAAGAGACAT 57.747 29.630 0.00 0.00 0.00 3.06
148 149 8.249638 TGATTTGAAATTTTGTGACAAGAGACA 58.750 29.630 0.00 0.00 0.00 3.41
149 150 8.633075 TGATTTGAAATTTTGTGACAAGAGAC 57.367 30.769 0.00 0.00 0.00 3.36
150 151 9.650539 TTTGATTTGAAATTTTGTGACAAGAGA 57.349 25.926 0.00 0.00 0.00 3.10
155 156 9.699985 CGAATTTTGATTTGAAATTTTGTGACA 57.300 25.926 0.00 0.00 36.96 3.58
156 157 9.913451 TCGAATTTTGATTTGAAATTTTGTGAC 57.087 25.926 0.00 0.00 36.96 3.67
164 165 9.384682 GCAATGTTTCGAATTTTGATTTGAAAT 57.615 25.926 14.33 0.00 42.52 2.17
165 166 8.610896 AGCAATGTTTCGAATTTTGATTTGAAA 58.389 25.926 15.39 9.40 40.00 2.69
166 167 8.140677 AGCAATGTTTCGAATTTTGATTTGAA 57.859 26.923 15.39 0.00 33.42 2.69
167 168 7.358270 CGAGCAATGTTTCGAATTTTGATTTGA 60.358 33.333 15.39 0.00 39.06 2.69
168 169 6.728854 CGAGCAATGTTTCGAATTTTGATTTG 59.271 34.615 15.39 7.74 39.06 2.32
169 170 6.640499 TCGAGCAATGTTTCGAATTTTGATTT 59.360 30.769 15.39 4.36 42.27 2.17
170 171 6.148948 TCGAGCAATGTTTCGAATTTTGATT 58.851 32.000 15.39 6.14 42.27 2.57
171 172 5.698832 TCGAGCAATGTTTCGAATTTTGAT 58.301 33.333 15.39 10.93 42.27 2.57
172 173 5.049749 TCTCGAGCAATGTTTCGAATTTTGA 60.050 36.000 7.81 4.60 44.25 2.69
173 174 5.146460 TCTCGAGCAATGTTTCGAATTTTG 58.854 37.500 7.81 4.87 44.25 2.44
174 175 5.356882 TCTCGAGCAATGTTTCGAATTTT 57.643 34.783 7.81 0.00 44.25 1.82
175 176 5.551760 ATCTCGAGCAATGTTTCGAATTT 57.448 34.783 7.81 0.00 44.25 1.82
176 177 5.580691 TGTATCTCGAGCAATGTTTCGAATT 59.419 36.000 7.81 6.31 44.25 2.17
177 178 5.109210 TGTATCTCGAGCAATGTTTCGAAT 58.891 37.500 7.81 10.43 44.25 3.34
178 179 4.490743 TGTATCTCGAGCAATGTTTCGAA 58.509 39.130 7.81 0.00 44.25 3.71
179 180 4.104696 TGTATCTCGAGCAATGTTTCGA 57.895 40.909 7.81 10.47 42.91 3.71
180 181 4.840401 TTGTATCTCGAGCAATGTTTCG 57.160 40.909 7.81 3.56 38.13 3.46
181 182 7.750458 TCATTTTTGTATCTCGAGCAATGTTTC 59.250 33.333 7.81 0.00 0.00 2.78
182 183 7.538678 GTCATTTTTGTATCTCGAGCAATGTTT 59.461 33.333 7.81 0.00 0.00 2.83
183 184 7.023575 GTCATTTTTGTATCTCGAGCAATGTT 58.976 34.615 7.81 0.00 0.00 2.71
184 185 6.149308 TGTCATTTTTGTATCTCGAGCAATGT 59.851 34.615 7.81 0.00 0.00 2.71
185 186 6.545508 TGTCATTTTTGTATCTCGAGCAATG 58.454 36.000 7.81 7.21 0.00 2.82
186 187 6.741992 TGTCATTTTTGTATCTCGAGCAAT 57.258 33.333 7.81 0.00 0.00 3.56
187 188 6.552859 TTGTCATTTTTGTATCTCGAGCAA 57.447 33.333 7.81 3.53 0.00 3.91
188 189 6.552859 TTTGTCATTTTTGTATCTCGAGCA 57.447 33.333 7.81 0.00 0.00 4.26
189 190 8.452989 AAATTTGTCATTTTTGTATCTCGAGC 57.547 30.769 7.81 0.00 0.00 5.03
210 211 9.430623 GCCCAACTTATGTTATGTACAAAAATT 57.569 29.630 0.00 0.00 40.89 1.82
211 212 8.811994 AGCCCAACTTATGTTATGTACAAAAAT 58.188 29.630 0.00 0.00 40.89 1.82
212 213 8.184304 AGCCCAACTTATGTTATGTACAAAAA 57.816 30.769 0.00 0.00 40.89 1.94
213 214 7.768807 AGCCCAACTTATGTTATGTACAAAA 57.231 32.000 0.00 0.00 40.89 2.44
214 215 7.768807 AAGCCCAACTTATGTTATGTACAAA 57.231 32.000 0.00 0.00 40.89 2.83
215 216 7.768807 AAAGCCCAACTTATGTTATGTACAA 57.231 32.000 0.00 0.00 37.77 2.41
216 217 8.104566 ACTAAAGCCCAACTTATGTTATGTACA 58.895 33.333 0.00 0.00 37.75 2.90
217 218 8.502105 ACTAAAGCCCAACTTATGTTATGTAC 57.498 34.615 0.00 0.00 37.75 2.90
218 219 9.523168 AAACTAAAGCCCAACTTATGTTATGTA 57.477 29.630 0.00 0.00 37.75 2.29
219 220 8.417273 AAACTAAAGCCCAACTTATGTTATGT 57.583 30.769 0.00 0.00 37.75 2.29
220 221 9.139174 CAAAACTAAAGCCCAACTTATGTTATG 57.861 33.333 0.00 0.00 37.75 1.90
221 222 8.311109 CCAAAACTAAAGCCCAACTTATGTTAT 58.689 33.333 0.00 0.00 37.75 1.89
222 223 7.662897 CCAAAACTAAAGCCCAACTTATGTTA 58.337 34.615 0.00 0.00 37.75 2.41
223 224 6.521162 CCAAAACTAAAGCCCAACTTATGTT 58.479 36.000 0.00 0.00 37.75 2.71
224 225 5.510690 GCCAAAACTAAAGCCCAACTTATGT 60.511 40.000 0.00 0.00 37.75 2.29
225 226 4.929211 GCCAAAACTAAAGCCCAACTTATG 59.071 41.667 0.00 0.00 37.75 1.90
226 227 4.020573 GGCCAAAACTAAAGCCCAACTTAT 60.021 41.667 0.00 0.00 37.75 1.73
227 228 3.322541 GGCCAAAACTAAAGCCCAACTTA 59.677 43.478 0.00 0.00 37.75 2.24
228 229 2.104111 GGCCAAAACTAAAGCCCAACTT 59.896 45.455 0.00 0.00 41.70 2.66
229 230 1.691976 GGCCAAAACTAAAGCCCAACT 59.308 47.619 0.00 0.00 39.60 3.16
230 231 2.163818 GGCCAAAACTAAAGCCCAAC 57.836 50.000 0.00 0.00 39.60 3.77
234 235 4.161377 TGATAATGGGCCAAAACTAAAGCC 59.839 41.667 11.89 0.00 44.99 4.35
235 236 5.109210 GTGATAATGGGCCAAAACTAAAGC 58.891 41.667 11.89 0.00 0.00 3.51
236 237 6.152661 TCTGTGATAATGGGCCAAAACTAAAG 59.847 38.462 11.89 4.44 0.00 1.85
237 238 6.013379 TCTGTGATAATGGGCCAAAACTAAA 58.987 36.000 11.89 0.00 0.00 1.85
238 239 5.575157 TCTGTGATAATGGGCCAAAACTAA 58.425 37.500 11.89 0.00 0.00 2.24
239 240 5.186256 TCTGTGATAATGGGCCAAAACTA 57.814 39.130 11.89 0.00 0.00 2.24
240 241 4.046286 TCTGTGATAATGGGCCAAAACT 57.954 40.909 11.89 0.00 0.00 2.66
241 242 4.160252 ACATCTGTGATAATGGGCCAAAAC 59.840 41.667 11.89 5.38 0.00 2.43
242 243 4.352009 ACATCTGTGATAATGGGCCAAAA 58.648 39.130 11.89 0.88 0.00 2.44
243 244 3.953612 GACATCTGTGATAATGGGCCAAA 59.046 43.478 11.89 1.34 0.00 3.28
244 245 3.053768 TGACATCTGTGATAATGGGCCAA 60.054 43.478 11.89 0.00 0.00 4.52
245 246 2.509131 TGACATCTGTGATAATGGGCCA 59.491 45.455 9.61 9.61 0.00 5.36
246 247 3.213206 TGACATCTGTGATAATGGGCC 57.787 47.619 0.00 0.00 0.00 5.80
247 248 5.779529 ATTTGACATCTGTGATAATGGGC 57.220 39.130 0.00 0.00 0.00 5.36
248 249 7.549839 ACAAATTTGACATCTGTGATAATGGG 58.450 34.615 24.64 0.00 0.00 4.00
249 250 8.245491 TGACAAATTTGACATCTGTGATAATGG 58.755 33.333 24.64 0.00 0.00 3.16
250 251 9.797556 ATGACAAATTTGACATCTGTGATAATG 57.202 29.630 24.28 0.00 38.79 1.90
254 255 9.550406 AAAAATGACAAATTTGACATCTGTGAT 57.450 25.926 28.02 14.24 41.39 3.06
255 256 8.819015 CAAAAATGACAAATTTGACATCTGTGA 58.181 29.630 28.02 6.78 41.39 3.58
256 257 8.605746 ACAAAAATGACAAATTTGACATCTGTG 58.394 29.630 28.02 23.48 41.39 3.66
257 258 8.721019 ACAAAAATGACAAATTTGACATCTGT 57.279 26.923 28.02 25.57 41.39 3.41
262 263 9.179552 CGAGATACAAAAATGACAAATTTGACA 57.820 29.630 24.64 23.34 37.46 3.58
263 264 9.393249 TCGAGATACAAAAATGACAAATTTGAC 57.607 29.630 24.64 18.43 37.46 3.18
264 265 9.611284 CTCGAGATACAAAAATGACAAATTTGA 57.389 29.630 24.64 3.48 37.46 2.69
265 266 8.368126 GCTCGAGATACAAAAATGACAAATTTG 58.632 33.333 18.75 16.67 39.38 2.32
266 267 8.081633 TGCTCGAGATACAAAAATGACAAATTT 58.918 29.630 18.75 0.00 0.00 1.82
267 268 7.592938 TGCTCGAGATACAAAAATGACAAATT 58.407 30.769 18.75 0.00 0.00 1.82
268 269 7.144722 TGCTCGAGATACAAAAATGACAAAT 57.855 32.000 18.75 0.00 0.00 2.32
269 270 6.552859 TGCTCGAGATACAAAAATGACAAA 57.447 33.333 18.75 0.00 0.00 2.83
270 271 6.552859 TTGCTCGAGATACAAAAATGACAA 57.447 33.333 18.75 2.82 0.00 3.18
271 272 6.149308 ACATTGCTCGAGATACAAAAATGACA 59.851 34.615 18.75 0.00 0.00 3.58
272 273 6.546395 ACATTGCTCGAGATACAAAAATGAC 58.454 36.000 18.75 0.00 0.00 3.06
273 274 6.741992 ACATTGCTCGAGATACAAAAATGA 57.258 33.333 18.75 0.00 0.00 2.57
274 275 7.253092 CGAAACATTGCTCGAGATACAAAAATG 60.253 37.037 18.75 14.25 37.23 2.32
275 276 6.742718 CGAAACATTGCTCGAGATACAAAAAT 59.257 34.615 18.75 0.84 37.23 1.82
276 277 6.073494 TCGAAACATTGCTCGAGATACAAAAA 60.073 34.615 18.75 0.00 39.07 1.94
277 278 5.407084 TCGAAACATTGCTCGAGATACAAAA 59.593 36.000 18.75 0.13 39.07 2.44
278 279 4.926832 TCGAAACATTGCTCGAGATACAAA 59.073 37.500 18.75 2.00 39.07 2.83
279 280 4.490743 TCGAAACATTGCTCGAGATACAA 58.509 39.130 18.75 11.56 39.07 2.41
280 281 4.104696 TCGAAACATTGCTCGAGATACA 57.895 40.909 18.75 1.12 39.07 2.29
281 282 5.643339 ATTCGAAACATTGCTCGAGATAC 57.357 39.130 18.75 0.00 44.25 2.24
282 283 6.662414 AAATTCGAAACATTGCTCGAGATA 57.338 33.333 18.75 2.54 44.25 1.98
283 284 5.551760 AAATTCGAAACATTGCTCGAGAT 57.448 34.783 18.75 0.00 44.25 2.75
284 285 5.356882 AAAATTCGAAACATTGCTCGAGA 57.643 34.783 18.75 0.00 44.25 4.04
285 286 7.725610 ATAAAAATTCGAAACATTGCTCGAG 57.274 32.000 8.45 8.45 44.25 4.04
286 287 8.423973 CAAATAAAAATTCGAAACATTGCTCGA 58.576 29.630 0.00 7.21 42.05 4.04
287 288 8.423973 TCAAATAAAAATTCGAAACATTGCTCG 58.576 29.630 0.00 3.07 36.39 5.03
308 309 9.688592 GATGTCTCTTGTCAGAAAATTTCAAAT 57.311 29.630 8.55 0.00 0.00 2.32
309 310 7.857389 CGATGTCTCTTGTCAGAAAATTTCAAA 59.143 33.333 8.55 0.00 0.00 2.69
310 311 7.226523 TCGATGTCTCTTGTCAGAAAATTTCAA 59.773 33.333 8.55 0.00 0.00 2.69
311 312 6.705825 TCGATGTCTCTTGTCAGAAAATTTCA 59.294 34.615 8.55 0.00 0.00 2.69
312 313 7.121974 TCGATGTCTCTTGTCAGAAAATTTC 57.878 36.000 0.00 0.00 0.00 2.17
313 314 7.173907 ACATCGATGTCTCTTGTCAGAAAATTT 59.826 33.333 25.18 0.00 35.87 1.82
314 315 6.652481 ACATCGATGTCTCTTGTCAGAAAATT 59.348 34.615 25.18 0.00 35.87 1.82
315 316 6.169094 ACATCGATGTCTCTTGTCAGAAAAT 58.831 36.000 25.18 0.00 35.87 1.82
316 317 5.541845 ACATCGATGTCTCTTGTCAGAAAA 58.458 37.500 25.18 0.00 35.87 2.29
317 318 5.139435 ACATCGATGTCTCTTGTCAGAAA 57.861 39.130 25.18 0.00 35.87 2.52
318 319 4.790765 ACATCGATGTCTCTTGTCAGAA 57.209 40.909 25.18 0.00 35.87 3.02
319 320 4.380973 GGAACATCGATGTCTCTTGTCAGA 60.381 45.833 30.06 0.00 40.80 3.27
320 321 3.862267 GGAACATCGATGTCTCTTGTCAG 59.138 47.826 30.06 0.28 40.80 3.51
321 322 3.673323 CGGAACATCGATGTCTCTTGTCA 60.673 47.826 30.06 0.00 40.80 3.58
322 323 2.854777 CGGAACATCGATGTCTCTTGTC 59.145 50.000 30.06 21.40 40.80 3.18
323 324 2.231478 ACGGAACATCGATGTCTCTTGT 59.769 45.455 30.06 23.30 40.80 3.16
324 325 2.854777 GACGGAACATCGATGTCTCTTG 59.145 50.000 30.06 22.82 40.80 3.02
325 326 3.152261 GACGGAACATCGATGTCTCTT 57.848 47.619 30.06 15.59 40.80 2.85
326 327 2.853731 GACGGAACATCGATGTCTCT 57.146 50.000 30.06 15.98 40.80 3.10
335 336 0.647410 CAGCACATCGACGGAACATC 59.353 55.000 0.00 0.00 0.00 3.06
336 337 1.361668 GCAGCACATCGACGGAACAT 61.362 55.000 0.00 0.00 0.00 2.71
337 338 2.027073 GCAGCACATCGACGGAACA 61.027 57.895 0.00 0.00 0.00 3.18
338 339 1.361668 ATGCAGCACATCGACGGAAC 61.362 55.000 0.00 0.00 31.52 3.62
339 340 0.673333 AATGCAGCACATCGACGGAA 60.673 50.000 0.00 0.00 38.34 4.30
340 341 0.673333 AAATGCAGCACATCGACGGA 60.673 50.000 0.00 0.00 38.34 4.69
341 342 0.168788 AAAATGCAGCACATCGACGG 59.831 50.000 0.00 0.00 38.34 4.79
342 343 1.967762 AAAAATGCAGCACATCGACG 58.032 45.000 0.00 0.00 38.34 5.12
385 386 4.505922 TGCTTCGATGCGAAAAACATTTTT 59.494 33.333 17.33 2.00 45.23 1.94
386 387 4.047822 TGCTTCGATGCGAAAAACATTTT 58.952 34.783 17.33 0.00 45.23 1.82
387 388 3.425193 GTGCTTCGATGCGAAAAACATTT 59.575 39.130 17.33 0.00 45.23 2.32
388 389 2.979813 GTGCTTCGATGCGAAAAACATT 59.020 40.909 17.33 0.00 45.23 2.71
389 390 2.584791 GTGCTTCGATGCGAAAAACAT 58.415 42.857 17.33 0.00 45.23 2.71
390 391 1.334599 GGTGCTTCGATGCGAAAAACA 60.335 47.619 17.33 0.60 45.23 2.83
391 392 1.327507 GGTGCTTCGATGCGAAAAAC 58.672 50.000 17.33 9.84 45.23 2.43
392 393 0.110419 CGGTGCTTCGATGCGAAAAA 60.110 50.000 17.33 0.00 45.23 1.94
393 394 1.495509 CGGTGCTTCGATGCGAAAA 59.504 52.632 17.33 0.00 45.23 2.29
394 395 2.387445 CCGGTGCTTCGATGCGAAA 61.387 57.895 17.33 0.00 45.23 3.46
395 396 2.813474 CCGGTGCTTCGATGCGAA 60.813 61.111 17.33 2.13 43.75 4.70
396 397 4.812476 CCCGGTGCTTCGATGCGA 62.812 66.667 17.33 5.28 35.36 5.10
397 398 4.812476 TCCCGGTGCTTCGATGCG 62.812 66.667 17.33 4.53 35.36 4.73
398 399 2.892425 CTCCCGGTGCTTCGATGC 60.892 66.667 15.88 15.88 0.00 3.91
399 400 2.892425 GCTCCCGGTGCTTCGATG 60.892 66.667 0.00 0.00 0.00 3.84
400 401 3.390521 TGCTCCCGGTGCTTCGAT 61.391 61.111 16.01 0.00 0.00 3.59
401 402 4.373116 GTGCTCCCGGTGCTTCGA 62.373 66.667 16.01 0.00 0.00 3.71
412 413 0.105453 TCCCAGATCTAGGGTGCTCC 60.105 60.000 22.26 0.00 46.82 4.70
413 414 1.337118 CTCCCAGATCTAGGGTGCTC 58.663 60.000 22.26 0.00 46.82 4.26
414 415 3.548793 CTCCCAGATCTAGGGTGCT 57.451 57.895 22.26 0.00 46.82 4.40
416 417 1.047002 CTGCTCCCAGATCTAGGGTG 58.953 60.000 22.26 20.93 46.82 4.61
417 418 0.639392 ACTGCTCCCAGATCTAGGGT 59.361 55.000 22.26 5.77 46.82 4.34
418 419 8.230444 AGTATCTACTGCTCCCAGATCTAGGG 62.230 50.000 19.03 19.03 41.77 3.53
419 420 3.517296 TCTACTGCTCCCAGATCTAGG 57.483 52.381 0.00 0.00 41.77 3.02
420 421 5.815581 AGTATCTACTGCTCCCAGATCTAG 58.184 45.833 0.00 0.00 41.77 2.43
421 422 5.851808 AGTATCTACTGCTCCCAGATCTA 57.148 43.478 0.00 0.00 41.77 1.98
422 423 4.740154 AGTATCTACTGCTCCCAGATCT 57.260 45.455 0.00 0.00 41.77 2.75
423 424 5.279256 GGAAAGTATCTACTGCTCCCAGATC 60.279 48.000 0.00 0.00 41.77 2.75
424 425 4.591072 GGAAAGTATCTACTGCTCCCAGAT 59.409 45.833 0.00 0.00 41.77 2.90
425 426 3.961408 GGAAAGTATCTACTGCTCCCAGA 59.039 47.826 0.00 0.00 41.77 3.86
426 427 4.329462 GGAAAGTATCTACTGCTCCCAG 57.671 50.000 7.21 0.00 44.80 4.45
428 429 2.036089 CGGGAAAGTATCTACTGCTCCC 59.964 54.545 19.21 19.21 46.26 4.30
429 430 2.546162 GCGGGAAAGTATCTACTGCTCC 60.546 54.545 9.02 9.02 37.93 4.70
430 431 2.362717 AGCGGGAAAGTATCTACTGCTC 59.637 50.000 0.00 0.00 36.50 4.26
431 432 2.389715 AGCGGGAAAGTATCTACTGCT 58.610 47.619 0.00 0.00 36.50 4.24
432 433 2.866762 CAAGCGGGAAAGTATCTACTGC 59.133 50.000 0.00 0.00 36.50 4.40
433 434 2.866762 GCAAGCGGGAAAGTATCTACTG 59.133 50.000 0.00 0.00 36.50 2.74
434 435 2.481449 CGCAAGCGGGAAAGTATCTACT 60.481 50.000 6.55 0.00 35.29 2.57
435 436 1.859080 CGCAAGCGGGAAAGTATCTAC 59.141 52.381 6.55 0.00 35.56 2.59
436 437 1.479323 ACGCAAGCGGGAAAGTATCTA 59.521 47.619 19.30 0.00 44.69 1.98
437 438 0.249398 ACGCAAGCGGGAAAGTATCT 59.751 50.000 19.30 0.00 44.69 1.98
438 439 0.651031 GACGCAAGCGGGAAAGTATC 59.349 55.000 19.30 0.61 44.69 2.24
439 440 0.249398 AGACGCAAGCGGGAAAGTAT 59.751 50.000 19.30 0.00 44.69 2.12
440 441 0.669318 CAGACGCAAGCGGGAAAGTA 60.669 55.000 19.30 0.00 44.69 2.24
441 442 1.961277 CAGACGCAAGCGGGAAAGT 60.961 57.895 19.30 0.00 44.69 2.66
442 443 0.669318 TACAGACGCAAGCGGGAAAG 60.669 55.000 19.30 6.29 44.69 2.62
443 444 0.947180 GTACAGACGCAAGCGGGAAA 60.947 55.000 19.30 0.00 44.69 3.13
444 445 1.373748 GTACAGACGCAAGCGGGAA 60.374 57.895 19.30 0.00 44.69 3.97
445 446 2.260434 GTACAGACGCAAGCGGGA 59.740 61.111 19.30 0.00 44.69 5.14
446 447 2.094659 CAGTACAGACGCAAGCGGG 61.095 63.158 19.30 10.07 44.69 6.13
447 448 0.109458 TACAGTACAGACGCAAGCGG 60.109 55.000 19.30 3.54 44.69 5.52
448 449 1.909376 ATACAGTACAGACGCAAGCG 58.091 50.000 13.50 13.50 46.03 4.68
449 450 5.773239 TTTAATACAGTACAGACGCAAGC 57.227 39.130 0.00 0.00 45.62 4.01
473 474 8.641541 CCAATGGAGCAAGTATAATAATGGTTT 58.358 33.333 0.00 0.00 0.00 3.27
474 475 8.004215 TCCAATGGAGCAAGTATAATAATGGTT 58.996 33.333 0.00 0.00 0.00 3.67
475 476 7.526041 TCCAATGGAGCAAGTATAATAATGGT 58.474 34.615 0.00 0.00 0.00 3.55
476 477 8.048534 CTCCAATGGAGCAAGTATAATAATGG 57.951 38.462 17.25 0.00 43.29 3.16
510 511 5.224135 AAACAAGTAGCACAAAACGTGTTT 58.776 33.333 11.80 11.80 46.32 2.83
514 515 4.854839 GTCAAAACAAGTAGCACAAAACGT 59.145 37.500 0.00 0.00 0.00 3.99
515 516 5.092781 AGTCAAAACAAGTAGCACAAAACG 58.907 37.500 0.00 0.00 0.00 3.60
516 517 6.090129 TGAGTCAAAACAAGTAGCACAAAAC 58.910 36.000 0.00 0.00 0.00 2.43
517 518 6.260870 TGAGTCAAAACAAGTAGCACAAAA 57.739 33.333 0.00 0.00 0.00 2.44
518 519 5.888691 TGAGTCAAAACAAGTAGCACAAA 57.111 34.783 0.00 0.00 0.00 2.83
519 520 5.356751 ACATGAGTCAAAACAAGTAGCACAA 59.643 36.000 0.00 0.00 0.00 3.33
547 548 4.035208 CCTGATAACATAAGGCAACGTTCC 59.965 45.833 0.00 3.04 46.39 3.62
560 561 3.386078 ACACTGATCTCGCCTGATAACAT 59.614 43.478 0.00 0.00 0.00 2.71
574 575 5.392380 CCTTGGCATAAAGTTGACACTGATC 60.392 44.000 0.00 0.00 33.31 2.92
578 579 4.098914 TCCTTGGCATAAAGTTGACACT 57.901 40.909 0.00 0.00 33.31 3.55
593 594 2.170397 GGGGCCACATATTTTTCCTTGG 59.830 50.000 4.39 0.00 0.00 3.61
608 611 1.080722 ATTTCCATTGCAGGGGCCA 59.919 52.632 4.39 0.00 40.13 5.36
611 614 0.826062 GTCCATTTCCATTGCAGGGG 59.174 55.000 6.64 3.20 0.00 4.79
665 668 3.640967 TGCAGGGACAAGCATTAGTTTTT 59.359 39.130 0.00 0.00 36.76 1.94
666 669 3.230134 TGCAGGGACAAGCATTAGTTTT 58.770 40.909 0.00 0.00 36.76 2.43
667 670 2.875296 TGCAGGGACAAGCATTAGTTT 58.125 42.857 0.00 0.00 36.76 2.66
668 671 2.558359 GTTGCAGGGACAAGCATTAGTT 59.442 45.455 0.00 0.00 40.92 2.24
669 672 2.162681 GTTGCAGGGACAAGCATTAGT 58.837 47.619 0.00 0.00 40.92 2.24
697 700 5.694458 AGAAATGCATAACGTTGGGTTTTTC 59.306 36.000 11.99 13.75 40.09 2.29
700 703 4.864704 AGAAATGCATAACGTTGGGTTT 57.135 36.364 11.99 5.00 40.09 3.27
701 704 4.279671 TCAAGAAATGCATAACGTTGGGTT 59.720 37.500 11.99 0.00 42.75 4.11
702 705 3.823873 TCAAGAAATGCATAACGTTGGGT 59.176 39.130 11.99 0.00 0.00 4.51
703 706 4.433186 TCAAGAAATGCATAACGTTGGG 57.567 40.909 11.99 3.72 0.00 4.12
704 707 5.516339 GGAATCAAGAAATGCATAACGTTGG 59.484 40.000 11.99 4.12 0.00 3.77
705 708 6.324819 AGGAATCAAGAAATGCATAACGTTG 58.675 36.000 11.99 2.16 0.00 4.10
706 709 6.515272 AGGAATCAAGAAATGCATAACGTT 57.485 33.333 5.88 5.88 0.00 3.99
707 710 6.597672 TGTAGGAATCAAGAAATGCATAACGT 59.402 34.615 0.00 0.00 0.00 3.99
708 711 7.015226 TGTAGGAATCAAGAAATGCATAACG 57.985 36.000 0.00 0.00 0.00 3.18
710 713 7.922278 GCAATGTAGGAATCAAGAAATGCATAA 59.078 33.333 0.00 0.00 0.00 1.90
711 714 7.286087 AGCAATGTAGGAATCAAGAAATGCATA 59.714 33.333 0.00 0.00 0.00 3.14
712 715 6.097839 AGCAATGTAGGAATCAAGAAATGCAT 59.902 34.615 0.00 0.00 0.00 3.96
770 773 1.054348 TACGTTCGCTCGTTCGTTCG 61.054 55.000 15.43 12.53 43.80 3.95
819 822 3.070018 AGAAAGGAAGTGATCTTGTGCG 58.930 45.455 0.00 0.00 33.64 5.34
826 829 2.573915 ACCCTGGAGAAAGGAAGTGATC 59.426 50.000 0.00 0.00 40.02 2.92
855 858 6.641062 CGCCTCAACTTTATTTTCTCTATCG 58.359 40.000 0.00 0.00 0.00 2.92
860 863 4.083271 ACTGCGCCTCAACTTTATTTTCTC 60.083 41.667 4.18 0.00 0.00 2.87
876 879 3.423154 GTGCACCTACACTGCGCC 61.423 66.667 5.22 0.00 38.90 6.53
878 881 2.742372 GGGTGCACCTACACTGCG 60.742 66.667 33.91 0.00 40.52 5.18
923 926 0.983378 GGTGAGGGTGCCACTATCCT 60.983 60.000 0.00 0.00 35.05 3.24
967 986 3.612115 TAGGTCGGGGGTCAGGTGG 62.612 68.421 0.00 0.00 0.00 4.61
968 987 1.611261 TTAGGTCGGGGGTCAGGTG 60.611 63.158 0.00 0.00 0.00 4.00
969 988 1.305887 CTTAGGTCGGGGGTCAGGT 60.306 63.158 0.00 0.00 0.00 4.00
988 1007 1.616994 GGAGGGCATATGTAATGGGGC 60.617 57.143 4.29 0.00 0.00 5.80
1057 1076 0.678950 GAGAGGAGGTAGCTCATGGC 59.321 60.000 22.66 5.78 42.19 4.40
1413 1434 6.034256 GCAAAAAGAAACATCATCCTTGATCG 59.966 38.462 0.00 0.00 40.70 3.69
1414 1435 7.095270 AGCAAAAAGAAACATCATCCTTGATC 58.905 34.615 0.00 0.00 40.70 2.92
1415 1436 7.001099 AGCAAAAAGAAACATCATCCTTGAT 57.999 32.000 0.00 0.00 43.51 2.57
1420 1441 5.570589 CGAAGAGCAAAAAGAAACATCATCC 59.429 40.000 0.00 0.00 0.00 3.51
1457 1478 5.185635 TCGCCATCATTTCAAAGGAGAAAAT 59.814 36.000 0.00 0.00 40.54 1.82
1458 1479 4.522405 TCGCCATCATTTCAAAGGAGAAAA 59.478 37.500 0.00 0.00 40.54 2.29
1460 1481 3.440173 GTCGCCATCATTTCAAAGGAGAA 59.560 43.478 0.00 0.00 30.08 2.87
1461 1482 3.009723 GTCGCCATCATTTCAAAGGAGA 58.990 45.455 0.00 0.00 0.00 3.71
1462 1483 2.223112 CGTCGCCATCATTTCAAAGGAG 60.223 50.000 0.00 0.00 0.00 3.69
1463 1484 1.737236 CGTCGCCATCATTTCAAAGGA 59.263 47.619 0.00 0.00 0.00 3.36
1464 1485 1.795162 GCGTCGCCATCATTTCAAAGG 60.795 52.381 5.75 0.00 0.00 3.11
1465 1486 1.135717 TGCGTCGCCATCATTTCAAAG 60.136 47.619 15.88 0.00 0.00 2.77
1466 1487 0.877743 TGCGTCGCCATCATTTCAAA 59.122 45.000 15.88 0.00 0.00 2.69
1467 1488 1.093972 ATGCGTCGCCATCATTTCAA 58.906 45.000 15.88 0.00 0.00 2.69
1468 1489 0.377905 CATGCGTCGCCATCATTTCA 59.622 50.000 15.88 0.00 0.00 2.69
1469 1490 0.657312 TCATGCGTCGCCATCATTTC 59.343 50.000 15.88 0.00 0.00 2.17
1470 1491 0.378257 GTCATGCGTCGCCATCATTT 59.622 50.000 15.88 0.00 0.00 2.32
1471 1492 1.765161 CGTCATGCGTCGCCATCATT 61.765 55.000 15.88 0.00 35.54 2.57
1472 1493 2.239812 CGTCATGCGTCGCCATCAT 61.240 57.895 15.88 0.00 35.54 2.45
1490 1511 2.434702 ACCTACAACCCTAGCTACATGC 59.565 50.000 0.00 0.00 43.29 4.06
1552 1574 8.687824 ATAAACCTCGAATACAAAATTTGCAG 57.312 30.769 5.52 0.00 0.00 4.41
1558 1580 6.509039 GCGACGATAAACCTCGAATACAAAAT 60.509 38.462 0.00 0.00 41.12 1.82
1582 1604 4.752661 TTTACACCCACATTCGTAAAGC 57.247 40.909 0.00 0.00 31.88 3.51
1617 1639 8.209802 TCCAAATTAAGGTTAGTAGAAGACCA 57.790 34.615 0.00 0.00 35.89 4.02
1681 1704 6.280643 TCCATGCAGTGAGTATAATACACAC 58.719 40.000 0.00 0.00 46.28 3.82
1682 1705 6.478512 TCCATGCAGTGAGTATAATACACA 57.521 37.500 0.00 0.00 0.00 3.72
1683 1706 6.425114 CCTTCCATGCAGTGAGTATAATACAC 59.575 42.308 0.00 0.00 0.00 2.90
1684 1707 6.099701 ACCTTCCATGCAGTGAGTATAATACA 59.900 38.462 0.00 0.00 0.00 2.29
1685 1708 6.525629 ACCTTCCATGCAGTGAGTATAATAC 58.474 40.000 0.00 0.00 0.00 1.89
1686 1709 6.747414 ACCTTCCATGCAGTGAGTATAATA 57.253 37.500 0.00 0.00 0.00 0.98
1687 1710 5.636903 ACCTTCCATGCAGTGAGTATAAT 57.363 39.130 0.00 0.00 0.00 1.28
1688 1711 5.185454 CAACCTTCCATGCAGTGAGTATAA 58.815 41.667 0.00 0.00 0.00 0.98
1689 1712 4.384098 CCAACCTTCCATGCAGTGAGTATA 60.384 45.833 0.00 0.00 0.00 1.47
1690 1713 3.614092 CAACCTTCCATGCAGTGAGTAT 58.386 45.455 0.00 0.00 0.00 2.12
1722 1745 8.686334 ACAGCGATGGATAAAGTTTGAAATATT 58.314 29.630 5.32 0.00 0.00 1.28
1763 1788 0.450482 CAAAGGCAACGCGTTAGTCG 60.450 55.000 26.11 13.55 46.39 4.18
1764 1789 0.110373 CCAAAGGCAACGCGTTAGTC 60.110 55.000 26.11 19.60 46.39 2.59
1765 1790 0.533308 TCCAAAGGCAACGCGTTAGT 60.533 50.000 26.11 9.20 46.39 2.24
1766 1791 0.165944 CTCCAAAGGCAACGCGTTAG 59.834 55.000 26.11 19.14 46.39 2.34
1767 1792 0.249953 TCTCCAAAGGCAACGCGTTA 60.250 50.000 26.11 5.32 46.39 3.18
1848 1886 0.924090 GCCCAACCACCCCTACTAAT 59.076 55.000 0.00 0.00 0.00 1.73
1849 1887 1.209523 GGCCCAACCACCCCTACTAA 61.210 60.000 0.00 0.00 38.86 2.24
1851 1889 2.939353 GGCCCAACCACCCCTACT 60.939 66.667 0.00 0.00 38.86 2.57
1852 1890 3.261677 TGGCCCAACCACCCCTAC 61.262 66.667 0.00 0.00 46.36 3.18
1871 1911 6.650120 AGATTAGTGTATGGTCGAATTGGTT 58.350 36.000 0.00 0.00 0.00 3.67
1929 1971 6.419980 TTCTTTTTCTTCGTGTTAACCGAA 57.580 33.333 22.14 22.14 41.60 4.30
1930 1972 6.250089 GTTTCTTTTTCTTCGTGTTAACCGA 58.750 36.000 13.06 13.06 0.00 4.69
1931 1973 5.453266 GGTTTCTTTTTCTTCGTGTTAACCG 59.547 40.000 2.48 6.64 0.00 4.44
1932 1974 5.453266 CGGTTTCTTTTTCTTCGTGTTAACC 59.547 40.000 2.48 0.00 0.00 2.85
1933 1975 5.052829 GCGGTTTCTTTTTCTTCGTGTTAAC 60.053 40.000 0.00 0.00 0.00 2.01
1934 1976 5.029654 GCGGTTTCTTTTTCTTCGTGTTAA 58.970 37.500 0.00 0.00 0.00 2.01
1935 1977 4.333372 AGCGGTTTCTTTTTCTTCGTGTTA 59.667 37.500 0.00 0.00 0.00 2.41
1936 1978 3.128068 AGCGGTTTCTTTTTCTTCGTGTT 59.872 39.130 0.00 0.00 0.00 3.32
1937 1979 2.681344 AGCGGTTTCTTTTTCTTCGTGT 59.319 40.909 0.00 0.00 0.00 4.49
1938 1980 3.334272 AGCGGTTTCTTTTTCTTCGTG 57.666 42.857 0.00 0.00 0.00 4.35
1939 1981 4.365899 AAAGCGGTTTCTTTTTCTTCGT 57.634 36.364 6.80 0.00 32.78 3.85
1940 1982 6.635239 TCATAAAAGCGGTTTCTTTTTCTTCG 59.365 34.615 13.74 0.00 41.89 3.79
1941 1983 7.357287 CGTCATAAAAGCGGTTTCTTTTTCTTC 60.357 37.037 13.74 0.00 41.89 2.87
1942 1984 6.416750 CGTCATAAAAGCGGTTTCTTTTTCTT 59.583 34.615 13.74 0.00 41.89 2.52
1943 1985 5.912955 CGTCATAAAAGCGGTTTCTTTTTCT 59.087 36.000 13.74 0.00 41.89 2.52
1944 1986 5.116528 CCGTCATAAAAGCGGTTTCTTTTTC 59.883 40.000 13.74 2.65 41.89 2.29
1945 1987 4.979815 CCGTCATAAAAGCGGTTTCTTTTT 59.020 37.500 13.74 0.00 41.89 1.94
1946 1988 4.542735 CCGTCATAAAAGCGGTTTCTTTT 58.457 39.130 13.74 8.25 45.24 2.27
1947 1989 3.057806 CCCGTCATAAAAGCGGTTTCTTT 60.058 43.478 13.74 0.18 43.56 2.52
1948 1990 2.486592 CCCGTCATAAAAGCGGTTTCTT 59.513 45.455 13.74 0.96 43.56 2.52
1949 1991 2.081462 CCCGTCATAAAAGCGGTTTCT 58.919 47.619 13.74 6.54 43.56 2.52
1950 1992 1.466866 GCCCGTCATAAAAGCGGTTTC 60.467 52.381 13.74 0.00 43.56 2.78
1951 1993 0.524414 GCCCGTCATAAAAGCGGTTT 59.476 50.000 6.80 6.80 43.56 3.27
1952 1994 1.310216 GGCCCGTCATAAAAGCGGTT 61.310 55.000 0.00 0.00 43.56 4.44
1953 1995 1.747745 GGCCCGTCATAAAAGCGGT 60.748 57.895 0.00 0.00 43.56 5.68
1954 1996 2.819552 CGGCCCGTCATAAAAGCGG 61.820 63.158 0.00 0.00 44.55 5.52
1955 1997 1.363145 TTCGGCCCGTCATAAAAGCG 61.363 55.000 1.63 0.00 0.00 4.68
1956 1998 0.806241 TTTCGGCCCGTCATAAAAGC 59.194 50.000 1.63 0.00 0.00 3.51
1957 1999 3.250040 CCTATTTCGGCCCGTCATAAAAG 59.750 47.826 1.63 0.00 0.00 2.27
1958 2000 3.118334 TCCTATTTCGGCCCGTCATAAAA 60.118 43.478 1.63 0.00 0.00 1.52
1959 2001 2.435069 TCCTATTTCGGCCCGTCATAAA 59.565 45.455 1.63 0.00 0.00 1.40
1960 2002 2.036733 CTCCTATTTCGGCCCGTCATAA 59.963 50.000 1.63 0.00 0.00 1.90
1961 2003 1.616865 CTCCTATTTCGGCCCGTCATA 59.383 52.381 1.63 0.00 0.00 2.15
1962 2004 0.393077 CTCCTATTTCGGCCCGTCAT 59.607 55.000 1.63 0.00 0.00 3.06
1963 2005 0.685131 TCTCCTATTTCGGCCCGTCA 60.685 55.000 1.63 0.00 0.00 4.35
1964 2006 0.462789 TTCTCCTATTTCGGCCCGTC 59.537 55.000 1.63 0.00 0.00 4.79
1965 2007 0.177373 GTTCTCCTATTTCGGCCCGT 59.823 55.000 1.63 0.00 0.00 5.28
1966 2008 0.177141 TGTTCTCCTATTTCGGCCCG 59.823 55.000 0.00 0.00 0.00 6.13
1967 2009 2.640316 ATGTTCTCCTATTTCGGCCC 57.360 50.000 0.00 0.00 0.00 5.80
1968 2010 3.067833 GCTATGTTCTCCTATTTCGGCC 58.932 50.000 0.00 0.00 0.00 6.13
1969 2011 3.996480 AGCTATGTTCTCCTATTTCGGC 58.004 45.455 0.00 0.00 0.00 5.54
1970 2012 6.692486 ACATAGCTATGTTCTCCTATTTCGG 58.308 40.000 29.70 4.51 43.99 4.30
1981 2023 9.365150 TGGAGATGCCCTAACATAGCTATGTTC 62.365 44.444 41.35 30.56 43.37 3.18
1982 2024 7.660801 TGGAGATGCCCTAACATAGCTATGTT 61.661 42.308 39.77 39.77 45.96 2.71
1983 2025 6.227387 TGGAGATGCCCTAACATAGCTATGT 61.227 44.000 29.70 29.70 41.58 2.29
1984 2026 4.223700 TGGAGATGCCCTAACATAGCTATG 59.776 45.833 28.38 28.38 36.35 2.23
1985 2027 4.429505 TGGAGATGCCCTAACATAGCTAT 58.570 43.478 0.00 0.00 34.97 2.97
1986 2028 3.834813 CTGGAGATGCCCTAACATAGCTA 59.165 47.826 0.00 0.00 34.97 3.32
1987 2029 2.636893 CTGGAGATGCCCTAACATAGCT 59.363 50.000 0.00 0.00 34.97 3.32
1988 2030 2.873649 GCTGGAGATGCCCTAACATAGC 60.874 54.545 0.00 0.00 34.97 2.97
1989 2031 2.289945 GGCTGGAGATGCCCTAACATAG 60.290 54.545 0.00 0.00 44.32 2.23
1990 2032 1.699634 GGCTGGAGATGCCCTAACATA 59.300 52.381 0.00 0.00 44.32 2.29
1991 2033 0.475906 GGCTGGAGATGCCCTAACAT 59.524 55.000 0.00 0.00 44.32 2.71
1992 2034 1.915228 GGCTGGAGATGCCCTAACA 59.085 57.895 0.00 0.00 44.32 2.41
1993 2035 4.887615 GGCTGGAGATGCCCTAAC 57.112 61.111 0.00 0.00 44.32 2.34
2017 2059 4.052518 CTGGGGAGGGCCTGTTGG 62.053 72.222 12.95 0.00 0.00 3.77
2018 2060 4.052518 CCTGGGGAGGGCCTGTTG 62.053 72.222 12.95 0.00 0.00 3.33
2024 2066 3.662117 AAAATCGCCTGGGGAGGGC 62.662 63.158 18.77 0.00 45.57 5.19
2025 2067 1.754234 CAAAATCGCCTGGGGAGGG 60.754 63.158 18.77 4.75 0.00 4.30
2026 2068 2.418083 GCAAAATCGCCTGGGGAGG 61.418 63.158 18.77 9.32 0.00 4.30
2027 2069 3.200522 GCAAAATCGCCTGGGGAG 58.799 61.111 18.77 6.49 0.00 4.30
2058 2100 2.983592 CGCGACTGGGGCCTTTTT 60.984 61.111 0.00 0.00 0.00 1.94
2075 2117 4.678743 AAACGGGCTTCTGGGGGC 62.679 66.667 0.00 0.00 0.00 5.80
2076 2118 1.532604 GAAAAACGGGCTTCTGGGGG 61.533 60.000 0.00 0.00 0.00 5.40
2077 2119 1.862602 CGAAAAACGGGCTTCTGGGG 61.863 60.000 0.00 0.00 38.46 4.96
2078 2120 1.579429 CGAAAAACGGGCTTCTGGG 59.421 57.895 0.00 0.00 38.46 4.45
2079 2121 1.081442 GCGAAAAACGGGCTTCTGG 60.081 57.895 0.00 0.00 42.83 3.86
2080 2122 1.081442 GGCGAAAAACGGGCTTCTG 60.081 57.895 0.00 0.00 42.83 3.02
2081 2123 2.613506 CGGCGAAAAACGGGCTTCT 61.614 57.895 0.00 0.00 42.83 2.85
2082 2124 2.127003 CGGCGAAAAACGGGCTTC 60.127 61.111 0.00 0.00 42.83 3.86
2083 2125 3.666253 CCGGCGAAAAACGGGCTT 61.666 61.111 9.30 0.00 46.08 4.35
2088 2130 4.439472 CCGAGCCGGCGAAAAACG 62.439 66.667 23.20 19.15 41.17 3.60
2089 2131 4.097863 CCCGAGCCGGCGAAAAAC 62.098 66.667 23.20 8.62 46.86 2.43
2108 2150 1.890041 TCCGCCGACACCAGTTTTG 60.890 57.895 0.00 0.00 0.00 2.44
2109 2151 1.890510 GTCCGCCGACACCAGTTTT 60.891 57.895 0.00 0.00 38.99 2.43
2110 2152 2.280592 GTCCGCCGACACCAGTTT 60.281 61.111 0.00 0.00 38.99 2.66
2111 2153 4.309950 GGTCCGCCGACACCAGTT 62.310 66.667 7.50 0.00 41.13 3.16
2157 2199 3.984193 CTTCTGCCGGCTCCCCAAG 62.984 68.421 29.70 15.77 0.00 3.61
2158 2200 4.033776 CTTCTGCCGGCTCCCCAA 62.034 66.667 29.70 11.55 0.00 4.12
2162 2204 4.760047 TTCGCTTCTGCCGGCTCC 62.760 66.667 29.70 9.98 35.36 4.70
2163 2205 1.852067 TTTTTCGCTTCTGCCGGCTC 61.852 55.000 29.70 10.34 35.36 4.70
2164 2206 1.856265 CTTTTTCGCTTCTGCCGGCT 61.856 55.000 29.70 0.00 35.36 5.52
2165 2207 1.442688 CTTTTTCGCTTCTGCCGGC 60.443 57.895 22.73 22.73 35.36 6.13
2166 2208 1.210155 CCTTTTTCGCTTCTGCCGG 59.790 57.895 0.00 0.00 35.36 6.13
2167 2209 1.442688 GCCTTTTTCGCTTCTGCCG 60.443 57.895 0.00 0.00 35.36 5.69
2168 2210 1.442688 CGCCTTTTTCGCTTCTGCC 60.443 57.895 0.00 0.00 35.36 4.85
2169 2211 4.137145 CGCCTTTTTCGCTTCTGC 57.863 55.556 0.00 0.00 0.00 4.26
2177 2219 4.717629 GGCCCACGCGCCTTTTTC 62.718 66.667 5.73 0.00 46.10 2.29
2206 2248 3.431725 GAAAAGGCCCTCGGTGCG 61.432 66.667 0.00 0.00 0.00 5.34
2207 2249 3.062466 GGAAAAGGCCCTCGGTGC 61.062 66.667 0.00 0.00 0.00 5.01
2208 2250 2.361230 GGGAAAAGGCCCTCGGTG 60.361 66.667 0.00 0.00 45.12 4.94
2209 2251 4.029809 CGGGAAAAGGCCCTCGGT 62.030 66.667 0.00 0.00 46.44 4.69
2215 2257 3.277211 GAAACGGCGGGAAAAGGCC 62.277 63.158 13.24 0.00 45.95 5.19
2216 2258 1.802337 AAGAAACGGCGGGAAAAGGC 61.802 55.000 13.24 0.00 0.00 4.35
2217 2259 0.039527 CAAGAAACGGCGGGAAAAGG 60.040 55.000 13.24 0.00 0.00 3.11
2218 2260 0.948678 TCAAGAAACGGCGGGAAAAG 59.051 50.000 13.24 0.00 0.00 2.27
2219 2261 0.664224 GTCAAGAAACGGCGGGAAAA 59.336 50.000 13.24 0.00 0.00 2.29
2220 2262 1.500512 CGTCAAGAAACGGCGGGAAA 61.501 55.000 13.24 0.00 38.96 3.13
2221 2263 1.957186 CGTCAAGAAACGGCGGGAA 60.957 57.895 13.24 0.00 38.96 3.97
2222 2264 2.356553 CGTCAAGAAACGGCGGGA 60.357 61.111 13.24 0.00 38.96 5.14
2223 2265 4.084888 GCGTCAAGAAACGGCGGG 62.085 66.667 13.24 0.00 42.81 6.13
2224 2266 2.113131 AAAGCGTCAAGAAACGGCGG 62.113 55.000 13.24 0.00 42.81 6.13
2225 2267 0.316689 AAAAGCGTCAAGAAACGGCG 60.317 50.000 4.80 4.80 42.81 6.46
2226 2268 1.395670 GAAAAGCGTCAAGAAACGGC 58.604 50.000 0.00 0.00 42.81 5.68
2227 2269 1.334689 GGGAAAAGCGTCAAGAAACGG 60.335 52.381 0.00 0.00 42.81 4.44
2228 2270 1.602377 AGGGAAAAGCGTCAAGAAACG 59.398 47.619 0.00 0.00 45.31 3.60
2229 2271 2.349532 CGAGGGAAAAGCGTCAAGAAAC 60.350 50.000 0.00 0.00 0.00 2.78
2230 2272 1.871039 CGAGGGAAAAGCGTCAAGAAA 59.129 47.619 0.00 0.00 0.00 2.52
2231 2273 1.508632 CGAGGGAAAAGCGTCAAGAA 58.491 50.000 0.00 0.00 0.00 2.52
2232 2274 0.949105 GCGAGGGAAAAGCGTCAAGA 60.949 55.000 0.00 0.00 0.00 3.02
2233 2275 1.227999 TGCGAGGGAAAAGCGTCAAG 61.228 55.000 0.00 0.00 0.00 3.02
2234 2276 0.605319 ATGCGAGGGAAAAGCGTCAA 60.605 50.000 0.00 0.00 0.00 3.18
2235 2277 1.003839 ATGCGAGGGAAAAGCGTCA 60.004 52.632 0.00 0.00 0.00 4.35
2236 2278 0.741221 AGATGCGAGGGAAAAGCGTC 60.741 55.000 1.08 1.08 44.64 5.19
2237 2279 0.741221 GAGATGCGAGGGAAAAGCGT 60.741 55.000 0.00 0.00 0.00 5.07
2238 2280 0.460987 AGAGATGCGAGGGAAAAGCG 60.461 55.000 0.00 0.00 0.00 4.68
2239 2281 1.294857 GAGAGATGCGAGGGAAAAGC 58.705 55.000 0.00 0.00 0.00 3.51
2240 2282 1.474143 GGGAGAGATGCGAGGGAAAAG 60.474 57.143 0.00 0.00 0.00 2.27
2241 2283 0.541863 GGGAGAGATGCGAGGGAAAA 59.458 55.000 0.00 0.00 0.00 2.29
2242 2284 1.676678 CGGGAGAGATGCGAGGGAAA 61.677 60.000 0.00 0.00 0.00 3.13
2243 2285 2.127869 CGGGAGAGATGCGAGGGAA 61.128 63.158 0.00 0.00 0.00 3.97
2244 2286 2.519541 CGGGAGAGATGCGAGGGA 60.520 66.667 0.00 0.00 0.00 4.20
2245 2287 4.292178 GCGGGAGAGATGCGAGGG 62.292 72.222 0.00 0.00 0.00 4.30
2246 2288 3.206211 GAGCGGGAGAGATGCGAGG 62.206 68.421 0.00 0.00 0.00 4.63
2247 2289 2.334653 GAGCGGGAGAGATGCGAG 59.665 66.667 0.00 0.00 0.00 5.03
2248 2290 3.586961 CGAGCGGGAGAGATGCGA 61.587 66.667 0.00 0.00 0.00 5.10
2250 2292 3.839642 GAGCGAGCGGGAGAGATGC 62.840 68.421 0.00 0.00 0.00 3.91
2251 2293 2.334653 GAGCGAGCGGGAGAGATG 59.665 66.667 0.00 0.00 0.00 2.90
2252 2294 3.283684 CGAGCGAGCGGGAGAGAT 61.284 66.667 0.00 0.00 0.00 2.75
2261 2303 4.882396 GGAGGGAAGCGAGCGAGC 62.882 72.222 0.00 0.00 37.41 5.03
2262 2304 4.214327 GGGAGGGAAGCGAGCGAG 62.214 72.222 0.00 0.00 0.00 5.03
2268 2310 4.489771 AATGGCGGGAGGGAAGCG 62.490 66.667 0.00 0.00 0.00 4.68
2269 2311 2.517166 GAATGGCGGGAGGGAAGC 60.517 66.667 0.00 0.00 0.00 3.86
2270 2312 1.147153 GAGAATGGCGGGAGGGAAG 59.853 63.158 0.00 0.00 0.00 3.46
2271 2313 1.306997 AGAGAATGGCGGGAGGGAA 60.307 57.895 0.00 0.00 0.00 3.97
2272 2314 1.762460 GAGAGAATGGCGGGAGGGA 60.762 63.158 0.00 0.00 0.00 4.20
2273 2315 2.812619 GGAGAGAATGGCGGGAGGG 61.813 68.421 0.00 0.00 0.00 4.30
2274 2316 2.812619 GGGAGAGAATGGCGGGAGG 61.813 68.421 0.00 0.00 0.00 4.30
2275 2317 1.341156 AAGGGAGAGAATGGCGGGAG 61.341 60.000 0.00 0.00 0.00 4.30
2276 2318 0.914417 AAAGGGAGAGAATGGCGGGA 60.914 55.000 0.00 0.00 0.00 5.14
2277 2319 0.464554 GAAAGGGAGAGAATGGCGGG 60.465 60.000 0.00 0.00 0.00 6.13
2278 2320 0.543749 AGAAAGGGAGAGAATGGCGG 59.456 55.000 0.00 0.00 0.00 6.13
2279 2321 1.474143 GGAGAAAGGGAGAGAATGGCG 60.474 57.143 0.00 0.00 0.00 5.69
2280 2322 1.133945 GGGAGAAAGGGAGAGAATGGC 60.134 57.143 0.00 0.00 0.00 4.40
2281 2323 1.139853 CGGGAGAAAGGGAGAGAATGG 59.860 57.143 0.00 0.00 0.00 3.16
2282 2324 1.474143 GCGGGAGAAAGGGAGAGAATG 60.474 57.143 0.00 0.00 0.00 2.67
2283 2325 0.833949 GCGGGAGAAAGGGAGAGAAT 59.166 55.000 0.00 0.00 0.00 2.40
2284 2326 1.265454 GGCGGGAGAAAGGGAGAGAA 61.265 60.000 0.00 0.00 0.00 2.87
2285 2327 1.686110 GGCGGGAGAAAGGGAGAGA 60.686 63.158 0.00 0.00 0.00 3.10
2286 2328 1.553690 TTGGCGGGAGAAAGGGAGAG 61.554 60.000 0.00 0.00 0.00 3.20
2287 2329 1.131303 TTTGGCGGGAGAAAGGGAGA 61.131 55.000 0.00 0.00 0.00 3.71
2288 2330 0.960861 GTTTGGCGGGAGAAAGGGAG 60.961 60.000 0.00 0.00 0.00 4.30
2289 2331 1.074248 GTTTGGCGGGAGAAAGGGA 59.926 57.895 0.00 0.00 0.00 4.20
2290 2332 1.977009 GGTTTGGCGGGAGAAAGGG 60.977 63.158 0.00 0.00 0.00 3.95
2291 2333 0.960861 GAGGTTTGGCGGGAGAAAGG 60.961 60.000 0.00 0.00 0.00 3.11
2292 2334 0.960861 GGAGGTTTGGCGGGAGAAAG 60.961 60.000 0.00 0.00 0.00 2.62
2293 2335 1.074248 GGAGGTTTGGCGGGAGAAA 59.926 57.895 0.00 0.00 0.00 2.52
2294 2336 1.838073 GAGGAGGTTTGGCGGGAGAA 61.838 60.000 0.00 0.00 0.00 2.87
2295 2337 2.203938 AGGAGGTTTGGCGGGAGA 60.204 61.111 0.00 0.00 0.00 3.71
2296 2338 2.269241 GAGGAGGTTTGGCGGGAG 59.731 66.667 0.00 0.00 0.00 4.30
2297 2339 3.327404 GGAGGAGGTTTGGCGGGA 61.327 66.667 0.00 0.00 0.00 5.14
2298 2340 4.426313 GGGAGGAGGTTTGGCGGG 62.426 72.222 0.00 0.00 0.00 6.13
2299 2341 4.778143 CGGGAGGAGGTTTGGCGG 62.778 72.222 0.00 0.00 0.00 6.13
2301 2343 3.978571 GAGCGGGAGGAGGTTTGGC 62.979 68.421 0.00 0.00 0.00 4.52
2302 2344 2.269241 GAGCGGGAGGAGGTTTGG 59.731 66.667 0.00 0.00 0.00 3.28
2303 2345 2.125512 CGAGCGGGAGGAGGTTTG 60.126 66.667 0.00 0.00 0.00 2.93
2304 2346 4.083862 GCGAGCGGGAGGAGGTTT 62.084 66.667 0.00 0.00 0.00 3.27
2316 2358 3.411351 TGTTTCTTCGCGGCGAGC 61.411 61.111 25.02 13.96 43.95 5.03
2317 2359 2.470286 GTGTTTCTTCGCGGCGAG 59.530 61.111 25.02 18.31 37.14 5.03
2318 2360 3.399770 CGTGTTTCTTCGCGGCGA 61.400 61.111 22.69 22.69 37.62 5.54
2324 2366 1.154225 GGCATGGCGTGTTTCTTCG 60.154 57.895 2.41 0.00 0.00 3.79
2325 2367 1.154225 CGGCATGGCGTGTTTCTTC 60.154 57.895 31.39 0.00 0.00 2.87
2326 2368 2.953821 CGGCATGGCGTGTTTCTT 59.046 55.556 31.39 0.00 0.00 2.52
2327 2369 3.737172 GCGGCATGGCGTGTTTCT 61.737 61.111 37.28 0.00 0.00 2.52
2328 2370 4.776647 GGCGGCATGGCGTGTTTC 62.777 66.667 37.28 22.67 0.00 2.78
2336 2378 3.088941 TACTTCCTCGGCGGCATGG 62.089 63.158 10.53 10.46 0.00 3.66
2337 2379 1.883084 GTACTTCCTCGGCGGCATG 60.883 63.158 10.53 0.00 0.00 4.06
2338 2380 2.499685 GTACTTCCTCGGCGGCAT 59.500 61.111 10.53 0.00 0.00 4.40
2339 2381 4.124351 CGTACTTCCTCGGCGGCA 62.124 66.667 10.53 0.00 0.00 5.69
2341 2383 4.867599 GGCGTACTTCCTCGGCGG 62.868 72.222 7.21 0.00 42.00 6.13
2344 2386 0.527817 GACATGGCGTACTTCCTCGG 60.528 60.000 0.00 0.00 0.00 4.63
2345 2387 0.866061 CGACATGGCGTACTTCCTCG 60.866 60.000 14.35 0.00 0.00 4.63
2346 2388 1.146358 GCGACATGGCGTACTTCCTC 61.146 60.000 24.28 0.00 0.00 3.71
2347 2389 1.153628 GCGACATGGCGTACTTCCT 60.154 57.895 24.28 0.00 0.00 3.36
2348 2390 3.395669 GCGACATGGCGTACTTCC 58.604 61.111 24.28 0.00 0.00 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.