Multiple sequence alignment - TraesCS2B01G062500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G062500 chr2B 100.000 3192 0 0 1 3192 29762260 29759069 0.000000e+00 5895
1 TraesCS2B01G062500 chr2D 88.864 2209 129 49 381 2512 17452031 17454199 0.000000e+00 2608
2 TraesCS2B01G062500 chr2D 95.495 555 19 5 2641 3192 516362255 516362806 0.000000e+00 881
3 TraesCS2B01G062500 chr2D 93.211 383 26 0 1 383 129950456 129950838 5.980000e-157 564
4 TraesCS2B01G062500 chr2D 95.597 318 12 2 2876 3192 605620400 605620084 2.840000e-140 508
5 TraesCS2B01G062500 chr2D 89.125 377 25 5 2502 2876 605620924 605620562 3.750000e-124 455
6 TraesCS2B01G062500 chr2A 90.193 1193 73 22 1167 2333 18833825 18834999 0.000000e+00 1515
7 TraesCS2B01G062500 chr2A 85.580 853 62 14 381 1183 18832963 18833804 0.000000e+00 837
8 TraesCS2B01G062500 chr2A 92.950 383 27 0 1 383 2338096 2338478 2.780000e-155 558
9 TraesCS2B01G062500 chr2A 95.385 130 4 1 2383 2512 18834997 18835124 4.170000e-49 206
10 TraesCS2B01G062500 chr5D 94.356 691 29 9 2507 3192 371468136 371467451 0.000000e+00 1051
11 TraesCS2B01G062500 chr4D 93.323 674 28 12 2522 3192 298895922 298895263 0.000000e+00 979
12 TraesCS2B01G062500 chr4D 88.668 653 61 8 2544 3192 418513706 418513063 0.000000e+00 784
13 TraesCS2B01G062500 chr7A 87.883 685 46 17 2516 3192 728017465 728016810 0.000000e+00 771
14 TraesCS2B01G062500 chr6A 86.950 682 64 15 2513 3192 595499654 595500312 0.000000e+00 743
15 TraesCS2B01G062500 chr6A 91.566 498 36 3 2563 3058 616346937 616347430 0.000000e+00 682
16 TraesCS2B01G062500 chr6A 84.773 683 60 22 2516 3192 603371460 603370816 0.000000e+00 645
17 TraesCS2B01G062500 chr6B 88.475 590 49 10 2606 3192 492863393 492863966 0.000000e+00 695
18 TraesCS2B01G062500 chr6D 93.995 383 23 0 1 383 419293984 419294366 5.940000e-162 580
19 TraesCS2B01G062500 chr6D 93.438 381 25 0 3 383 433214177 433214557 1.660000e-157 566
20 TraesCS2B01G062500 chr6D 93.005 386 27 0 1 386 12855527 12855142 5.980000e-157 564
21 TraesCS2B01G062500 chr3D 93.782 386 24 0 1 386 495301177 495300792 5.940000e-162 580
22 TraesCS2B01G062500 chr3B 92.746 386 28 0 1 386 829557496 829557111 2.780000e-155 558
23 TraesCS2B01G062500 chr1A 92.746 386 28 0 1 386 579170152 579169767 2.780000e-155 558
24 TraesCS2B01G062500 chr7D 92.487 386 28 1 1 386 600256804 600256420 4.650000e-153 551
25 TraesCS2B01G062500 chr5A 80.095 211 38 4 2959 3169 705149004 705149210 1.530000e-33 154


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G062500 chr2B 29759069 29762260 3191 True 5895.000000 5895 100.000 1 3192 1 chr2B.!!$R1 3191
1 TraesCS2B01G062500 chr2D 17452031 17454199 2168 False 2608.000000 2608 88.864 381 2512 1 chr2D.!!$F1 2131
2 TraesCS2B01G062500 chr2D 516362255 516362806 551 False 881.000000 881 95.495 2641 3192 1 chr2D.!!$F3 551
3 TraesCS2B01G062500 chr2D 605620084 605620924 840 True 481.500000 508 92.361 2502 3192 2 chr2D.!!$R1 690
4 TraesCS2B01G062500 chr2A 18832963 18835124 2161 False 852.666667 1515 90.386 381 2512 3 chr2A.!!$F2 2131
5 TraesCS2B01G062500 chr5D 371467451 371468136 685 True 1051.000000 1051 94.356 2507 3192 1 chr5D.!!$R1 685
6 TraesCS2B01G062500 chr4D 298895263 298895922 659 True 979.000000 979 93.323 2522 3192 1 chr4D.!!$R1 670
7 TraesCS2B01G062500 chr4D 418513063 418513706 643 True 784.000000 784 88.668 2544 3192 1 chr4D.!!$R2 648
8 TraesCS2B01G062500 chr7A 728016810 728017465 655 True 771.000000 771 87.883 2516 3192 1 chr7A.!!$R1 676
9 TraesCS2B01G062500 chr6A 595499654 595500312 658 False 743.000000 743 86.950 2513 3192 1 chr6A.!!$F1 679
10 TraesCS2B01G062500 chr6A 603370816 603371460 644 True 645.000000 645 84.773 2516 3192 1 chr6A.!!$R1 676
11 TraesCS2B01G062500 chr6B 492863393 492863966 573 False 695.000000 695 88.475 2606 3192 1 chr6B.!!$F1 586

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
37 38 0.381089 CCGACACGGTAGACTGGATC 59.619 60.0 1.80 0.0 42.73 3.36 F
135 136 0.461339 AAATGTACCGTGGCTAGCCG 60.461 55.0 28.28 17.1 39.42 5.52 F
1379 1504 0.099436 GACCCATGCTGAATCGTTGC 59.901 55.0 0.00 0.0 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1372 1497 0.807667 GATCGAGTGGCTGCAACGAT 60.808 55.000 16.98 16.98 44.35 3.73 R
2132 2269 0.038159 GTCACCGTCTTGACCTCCTG 60.038 60.000 0.00 0.00 40.15 3.86 R
2239 2379 1.070577 CGTGAAGACTTGAAAGCGTGG 60.071 52.381 0.00 0.00 0.00 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.570096 TCTTCTTATTAATATCAACCGACACG 57.430 34.615 0.00 0.00 0.00 4.49
35 36 3.991999 CCGACACGGTAGACTGGA 58.008 61.111 1.80 0.00 42.73 3.86
36 37 2.490165 CCGACACGGTAGACTGGAT 58.510 57.895 1.80 0.00 42.73 3.41
37 38 0.381089 CCGACACGGTAGACTGGATC 59.619 60.000 1.80 0.00 42.73 3.36
38 39 1.092348 CGACACGGTAGACTGGATCA 58.908 55.000 0.00 0.00 0.00 2.92
39 40 1.471287 CGACACGGTAGACTGGATCAA 59.529 52.381 0.00 0.00 0.00 2.57
40 41 2.094906 CGACACGGTAGACTGGATCAAA 60.095 50.000 0.00 0.00 0.00 2.69
41 42 3.512680 GACACGGTAGACTGGATCAAAG 58.487 50.000 0.00 0.00 0.00 2.77
42 43 2.271800 CACGGTAGACTGGATCAAAGC 58.728 52.381 0.00 0.00 0.00 3.51
43 44 2.093973 CACGGTAGACTGGATCAAAGCT 60.094 50.000 0.00 0.00 0.00 3.74
44 45 2.166664 ACGGTAGACTGGATCAAAGCTC 59.833 50.000 0.00 0.00 0.00 4.09
45 46 2.428890 CGGTAGACTGGATCAAAGCTCT 59.571 50.000 0.00 1.02 0.00 4.09
46 47 3.632604 CGGTAGACTGGATCAAAGCTCTA 59.367 47.826 0.00 0.17 0.00 2.43
47 48 4.279671 CGGTAGACTGGATCAAAGCTCTAT 59.720 45.833 0.00 0.00 0.00 1.98
48 49 5.473846 CGGTAGACTGGATCAAAGCTCTATA 59.526 44.000 0.00 0.00 0.00 1.31
49 50 6.568844 CGGTAGACTGGATCAAAGCTCTATAC 60.569 46.154 0.00 0.00 0.00 1.47
50 51 6.265649 GGTAGACTGGATCAAAGCTCTATACA 59.734 42.308 0.00 0.00 0.00 2.29
51 52 6.992664 AGACTGGATCAAAGCTCTATACAT 57.007 37.500 0.00 0.00 0.00 2.29
52 53 9.015367 GTAGACTGGATCAAAGCTCTATACATA 57.985 37.037 0.00 0.00 0.00 2.29
53 54 8.121305 AGACTGGATCAAAGCTCTATACATAG 57.879 38.462 0.00 0.00 0.00 2.23
54 55 7.947332 AGACTGGATCAAAGCTCTATACATAGA 59.053 37.037 0.00 0.00 37.76 1.98
55 56 8.484214 ACTGGATCAAAGCTCTATACATAGAA 57.516 34.615 0.00 0.00 38.80 2.10
56 57 9.099071 ACTGGATCAAAGCTCTATACATAGAAT 57.901 33.333 0.00 0.00 38.80 2.40
57 58 9.585099 CTGGATCAAAGCTCTATACATAGAATC 57.415 37.037 0.00 0.73 38.80 2.52
58 59 8.535335 TGGATCAAAGCTCTATACATAGAATCC 58.465 37.037 13.70 13.70 38.54 3.01
59 60 8.535335 GGATCAAAGCTCTATACATAGAATCCA 58.465 37.037 14.83 0.00 38.25 3.41
60 61 9.364989 GATCAAAGCTCTATACATAGAATCCAC 57.635 37.037 0.87 0.00 38.80 4.02
61 62 8.484214 TCAAAGCTCTATACATAGAATCCACT 57.516 34.615 0.87 0.00 38.80 4.00
62 63 8.363390 TCAAAGCTCTATACATAGAATCCACTG 58.637 37.037 0.87 0.00 38.80 3.66
63 64 8.363390 CAAAGCTCTATACATAGAATCCACTGA 58.637 37.037 0.87 0.00 38.80 3.41
64 65 7.701539 AGCTCTATACATAGAATCCACTGAG 57.298 40.000 0.87 0.00 38.80 3.35
65 66 7.465960 AGCTCTATACATAGAATCCACTGAGA 58.534 38.462 0.87 0.00 38.80 3.27
66 67 7.947332 AGCTCTATACATAGAATCCACTGAGAA 59.053 37.037 0.87 0.00 38.80 2.87
67 68 8.748412 GCTCTATACATAGAATCCACTGAGAAT 58.252 37.037 0.87 0.00 38.80 2.40
72 73 6.360618 ACATAGAATCCACTGAGAATTTCCC 58.639 40.000 0.00 0.00 0.00 3.97
73 74 4.934797 AGAATCCACTGAGAATTTCCCA 57.065 40.909 0.00 0.00 0.00 4.37
74 75 5.463051 AGAATCCACTGAGAATTTCCCAT 57.537 39.130 0.00 0.00 0.00 4.00
75 76 5.835582 AGAATCCACTGAGAATTTCCCATT 58.164 37.500 0.00 0.00 0.00 3.16
76 77 5.890419 AGAATCCACTGAGAATTTCCCATTC 59.110 40.000 0.00 0.00 0.00 2.67
77 78 3.968265 TCCACTGAGAATTTCCCATTCC 58.032 45.455 0.00 0.00 0.00 3.01
78 79 3.026694 CCACTGAGAATTTCCCATTCCC 58.973 50.000 0.00 0.00 0.00 3.97
79 80 3.564133 CCACTGAGAATTTCCCATTCCCA 60.564 47.826 0.00 0.00 0.00 4.37
80 81 4.284178 CACTGAGAATTTCCCATTCCCAT 58.716 43.478 0.00 0.00 0.00 4.00
81 82 4.098960 CACTGAGAATTTCCCATTCCCATG 59.901 45.833 0.00 0.00 0.00 3.66
82 83 4.264532 ACTGAGAATTTCCCATTCCCATGT 60.265 41.667 0.00 0.00 0.00 3.21
83 84 5.044179 ACTGAGAATTTCCCATTCCCATGTA 60.044 40.000 0.00 0.00 0.00 2.29
84 85 5.448654 TGAGAATTTCCCATTCCCATGTAG 58.551 41.667 0.00 0.00 0.00 2.74
85 86 4.808042 AGAATTTCCCATTCCCATGTAGG 58.192 43.478 0.00 0.00 37.03 3.18
86 87 4.232820 AGAATTTCCCATTCCCATGTAGGT 59.767 41.667 0.00 0.00 34.66 3.08
87 88 4.625225 ATTTCCCATTCCCATGTAGGTT 57.375 40.909 0.00 0.00 34.66 3.50
88 89 3.662759 TTCCCATTCCCATGTAGGTTC 57.337 47.619 0.00 0.00 34.66 3.62
89 90 1.850345 TCCCATTCCCATGTAGGTTCC 59.150 52.381 0.00 0.00 34.66 3.62
90 91 1.568597 CCCATTCCCATGTAGGTTCCA 59.431 52.381 0.00 0.00 34.66 3.53
91 92 2.024464 CCCATTCCCATGTAGGTTCCAA 60.024 50.000 0.00 0.00 34.66 3.53
92 93 3.023832 CCATTCCCATGTAGGTTCCAAC 58.976 50.000 0.00 0.00 34.66 3.77
93 94 2.483014 TTCCCATGTAGGTTCCAACG 57.517 50.000 0.00 0.00 34.66 4.10
94 95 1.646912 TCCCATGTAGGTTCCAACGA 58.353 50.000 0.00 0.00 34.66 3.85
95 96 1.979308 TCCCATGTAGGTTCCAACGAA 59.021 47.619 0.00 0.00 34.66 3.85
96 97 2.372504 TCCCATGTAGGTTCCAACGAAA 59.627 45.455 0.00 0.00 34.66 3.46
97 98 3.009695 TCCCATGTAGGTTCCAACGAAAT 59.990 43.478 0.00 0.00 34.66 2.17
98 99 4.225492 TCCCATGTAGGTTCCAACGAAATA 59.775 41.667 0.00 0.00 34.66 1.40
99 100 4.334481 CCCATGTAGGTTCCAACGAAATAC 59.666 45.833 0.00 0.00 34.66 1.89
100 101 4.938832 CCATGTAGGTTCCAACGAAATACA 59.061 41.667 0.00 0.00 37.09 2.29
101 102 5.588648 CCATGTAGGTTCCAACGAAATACAT 59.411 40.000 0.00 0.00 40.44 2.29
102 103 6.238374 CCATGTAGGTTCCAACGAAATACATC 60.238 42.308 0.00 0.00 39.16 3.06
104 105 3.267483 AGGTTCCAACGAAATACATCGG 58.733 45.455 1.59 0.00 46.82 4.18
105 106 3.055675 AGGTTCCAACGAAATACATCGGA 60.056 43.478 1.59 0.00 46.82 4.55
106 107 3.063045 GGTTCCAACGAAATACATCGGAC 59.937 47.826 1.59 0.00 46.82 4.79
107 108 2.896168 TCCAACGAAATACATCGGACC 58.104 47.619 1.59 0.00 46.82 4.46
108 109 1.937899 CCAACGAAATACATCGGACCC 59.062 52.381 1.59 0.00 46.82 4.46
109 110 2.419574 CCAACGAAATACATCGGACCCT 60.420 50.000 1.59 0.00 46.82 4.34
110 111 3.267483 CAACGAAATACATCGGACCCTT 58.733 45.455 1.59 0.00 46.82 3.95
111 112 2.901249 ACGAAATACATCGGACCCTTG 58.099 47.619 1.59 0.00 46.82 3.61
112 113 2.235402 ACGAAATACATCGGACCCTTGT 59.765 45.455 1.59 0.13 46.82 3.16
113 114 2.607635 CGAAATACATCGGACCCTTGTG 59.392 50.000 4.57 0.00 39.12 3.33
114 115 3.677700 CGAAATACATCGGACCCTTGTGA 60.678 47.826 4.57 0.00 39.12 3.58
115 116 2.981859 ATACATCGGACCCTTGTGAC 57.018 50.000 4.57 0.00 0.00 3.67
116 117 1.634960 TACATCGGACCCTTGTGACA 58.365 50.000 4.57 0.00 0.00 3.58
117 118 0.762418 ACATCGGACCCTTGTGACAA 59.238 50.000 0.00 0.00 0.00 3.18
118 119 1.142060 ACATCGGACCCTTGTGACAAA 59.858 47.619 0.00 0.00 0.00 2.83
119 120 2.224769 ACATCGGACCCTTGTGACAAAT 60.225 45.455 0.00 0.00 0.00 2.32
120 121 1.890876 TCGGACCCTTGTGACAAATG 58.109 50.000 0.00 0.00 0.00 2.32
121 122 1.142060 TCGGACCCTTGTGACAAATGT 59.858 47.619 0.00 0.00 0.00 2.71
122 123 2.369203 TCGGACCCTTGTGACAAATGTA 59.631 45.455 0.00 0.00 0.00 2.29
123 124 2.482721 CGGACCCTTGTGACAAATGTAC 59.517 50.000 0.00 0.00 0.00 2.90
124 125 2.817844 GGACCCTTGTGACAAATGTACC 59.182 50.000 0.00 0.75 0.00 3.34
125 126 2.482721 GACCCTTGTGACAAATGTACCG 59.517 50.000 0.00 0.00 0.00 4.02
126 127 2.158726 ACCCTTGTGACAAATGTACCGT 60.159 45.455 0.00 0.00 0.00 4.83
127 128 2.225491 CCCTTGTGACAAATGTACCGTG 59.775 50.000 0.00 0.00 0.00 4.94
128 129 2.225491 CCTTGTGACAAATGTACCGTGG 59.775 50.000 0.00 0.00 0.00 4.94
129 130 1.231221 TGTGACAAATGTACCGTGGC 58.769 50.000 0.00 0.00 0.00 5.01
130 131 1.202710 TGTGACAAATGTACCGTGGCT 60.203 47.619 0.00 0.00 0.00 4.75
131 132 2.037381 TGTGACAAATGTACCGTGGCTA 59.963 45.455 0.00 0.00 0.00 3.93
132 133 2.671396 GTGACAAATGTACCGTGGCTAG 59.329 50.000 0.00 0.00 0.00 3.42
133 134 1.664151 GACAAATGTACCGTGGCTAGC 59.336 52.381 6.04 6.04 0.00 3.42
134 135 1.014352 CAAATGTACCGTGGCTAGCC 58.986 55.000 27.71 27.71 0.00 3.93
135 136 0.461339 AAATGTACCGTGGCTAGCCG 60.461 55.000 28.28 17.10 39.42 5.52
136 137 2.918230 AATGTACCGTGGCTAGCCGC 62.918 60.000 33.24 33.24 42.78 6.53
137 138 3.834799 GTACCGTGGCTAGCCGCT 61.835 66.667 37.24 25.61 43.94 5.52
138 139 3.833645 TACCGTGGCTAGCCGCTG 61.834 66.667 37.24 33.76 43.94 5.18
141 142 4.880537 CGTGGCTAGCCGCTGGAG 62.881 72.222 37.24 22.34 43.94 3.86
142 143 3.775654 GTGGCTAGCCGCTGGAGT 61.776 66.667 35.04 0.00 42.89 3.85
143 144 2.043349 TGGCTAGCCGCTGGAGTA 60.043 61.111 28.28 5.61 39.42 2.59
144 145 2.127869 TGGCTAGCCGCTGGAGTAG 61.128 63.158 28.28 0.00 39.42 2.57
145 146 2.128507 GGCTAGCCGCTGGAGTAGT 61.129 63.158 20.16 0.00 39.13 2.73
146 147 0.822532 GGCTAGCCGCTGGAGTAGTA 60.823 60.000 20.16 0.00 39.13 1.82
147 148 1.249407 GCTAGCCGCTGGAGTAGTAT 58.751 55.000 8.12 0.00 35.14 2.12
148 149 1.068194 GCTAGCCGCTGGAGTAGTATG 60.068 57.143 8.12 0.00 35.14 2.39
149 150 2.231529 CTAGCCGCTGGAGTAGTATGT 58.768 52.381 2.16 0.00 0.00 2.29
150 151 1.486211 AGCCGCTGGAGTAGTATGTT 58.514 50.000 0.00 0.00 0.00 2.71
151 152 1.409427 AGCCGCTGGAGTAGTATGTTC 59.591 52.381 0.00 0.00 0.00 3.18
152 153 1.538419 GCCGCTGGAGTAGTATGTTCC 60.538 57.143 0.00 0.00 0.00 3.62
153 154 1.754803 CCGCTGGAGTAGTATGTTCCA 59.245 52.381 0.00 0.00 38.62 3.53
154 155 2.365617 CCGCTGGAGTAGTATGTTCCAT 59.634 50.000 2.59 0.00 40.06 3.41
155 156 3.384668 CGCTGGAGTAGTATGTTCCATG 58.615 50.000 2.59 0.00 40.06 3.66
156 157 3.068165 CGCTGGAGTAGTATGTTCCATGA 59.932 47.826 0.00 0.00 40.06 3.07
157 158 4.262207 CGCTGGAGTAGTATGTTCCATGAT 60.262 45.833 0.00 0.00 40.06 2.45
158 159 5.615289 GCTGGAGTAGTATGTTCCATGATT 58.385 41.667 0.00 0.00 40.06 2.57
159 160 6.516693 CGCTGGAGTAGTATGTTCCATGATTA 60.517 42.308 0.00 0.00 40.06 1.75
160 161 6.870965 GCTGGAGTAGTATGTTCCATGATTAG 59.129 42.308 0.00 0.00 40.06 1.73
161 162 7.255977 GCTGGAGTAGTATGTTCCATGATTAGA 60.256 40.741 0.00 0.00 40.06 2.10
162 163 8.183104 TGGAGTAGTATGTTCCATGATTAGAG 57.817 38.462 0.00 0.00 36.13 2.43
163 164 7.785028 TGGAGTAGTATGTTCCATGATTAGAGT 59.215 37.037 0.00 0.00 36.13 3.24
164 165 8.301002 GGAGTAGTATGTTCCATGATTAGAGTC 58.699 40.741 0.00 0.00 0.00 3.36
165 166 9.073475 GAGTAGTATGTTCCATGATTAGAGTCT 57.927 37.037 0.00 0.00 0.00 3.24
168 169 8.415950 AGTATGTTCCATGATTAGAGTCTAGG 57.584 38.462 0.00 0.00 0.00 3.02
169 170 8.007742 AGTATGTTCCATGATTAGAGTCTAGGT 58.992 37.037 0.00 0.00 0.00 3.08
170 171 6.716934 TGTTCCATGATTAGAGTCTAGGTC 57.283 41.667 0.00 4.16 0.00 3.85
171 172 5.598830 TGTTCCATGATTAGAGTCTAGGTCC 59.401 44.000 0.00 0.00 0.00 4.46
172 173 5.403558 TCCATGATTAGAGTCTAGGTCCA 57.596 43.478 0.00 0.00 0.00 4.02
173 174 5.777449 TCCATGATTAGAGTCTAGGTCCAA 58.223 41.667 0.00 0.00 0.00 3.53
174 175 6.385443 TCCATGATTAGAGTCTAGGTCCAAT 58.615 40.000 0.00 0.00 0.00 3.16
175 176 6.846505 TCCATGATTAGAGTCTAGGTCCAATT 59.153 38.462 0.00 0.00 0.00 2.32
176 177 8.010697 TCCATGATTAGAGTCTAGGTCCAATTA 58.989 37.037 0.00 0.00 0.00 1.40
177 178 8.651389 CCATGATTAGAGTCTAGGTCCAATTAA 58.349 37.037 0.00 0.00 0.00 1.40
181 182 9.713713 GATTAGAGTCTAGGTCCAATTAAATCC 57.286 37.037 0.00 0.00 0.00 3.01
182 183 6.502074 AGAGTCTAGGTCCAATTAAATCCC 57.498 41.667 0.00 0.00 0.00 3.85
183 184 6.213525 AGAGTCTAGGTCCAATTAAATCCCT 58.786 40.000 0.00 0.00 0.00 4.20
184 185 6.678857 AGAGTCTAGGTCCAATTAAATCCCTT 59.321 38.462 0.00 0.00 0.00 3.95
185 186 6.901300 AGTCTAGGTCCAATTAAATCCCTTC 58.099 40.000 0.00 0.00 0.00 3.46
186 187 6.678857 AGTCTAGGTCCAATTAAATCCCTTCT 59.321 38.462 0.00 0.00 0.00 2.85
187 188 6.768381 GTCTAGGTCCAATTAAATCCCTTCTG 59.232 42.308 0.00 0.00 0.00 3.02
188 189 5.796502 AGGTCCAATTAAATCCCTTCTGA 57.203 39.130 0.00 0.00 0.00 3.27
189 190 6.152638 AGGTCCAATTAAATCCCTTCTGAA 57.847 37.500 0.00 0.00 0.00 3.02
190 191 5.952347 AGGTCCAATTAAATCCCTTCTGAAC 59.048 40.000 0.00 0.00 0.00 3.18
191 192 5.714806 GGTCCAATTAAATCCCTTCTGAACA 59.285 40.000 0.00 0.00 0.00 3.18
192 193 6.381133 GGTCCAATTAAATCCCTTCTGAACAT 59.619 38.462 0.00 0.00 0.00 2.71
193 194 7.416777 GGTCCAATTAAATCCCTTCTGAACATC 60.417 40.741 0.00 0.00 0.00 3.06
194 195 7.122650 GTCCAATTAAATCCCTTCTGAACATCA 59.877 37.037 0.00 0.00 0.00 3.07
195 196 7.122650 TCCAATTAAATCCCTTCTGAACATCAC 59.877 37.037 0.00 0.00 0.00 3.06
196 197 7.093814 CCAATTAAATCCCTTCTGAACATCACA 60.094 37.037 0.00 0.00 0.00 3.58
197 198 8.472413 CAATTAAATCCCTTCTGAACATCACAT 58.528 33.333 0.00 0.00 0.00 3.21
198 199 8.599624 ATTAAATCCCTTCTGAACATCACATT 57.400 30.769 0.00 0.00 0.00 2.71
199 200 6.923199 AAATCCCTTCTGAACATCACATTT 57.077 33.333 0.00 0.00 0.00 2.32
200 201 5.909621 ATCCCTTCTGAACATCACATTTG 57.090 39.130 0.00 0.00 0.00 2.32
201 202 4.081406 TCCCTTCTGAACATCACATTTGG 58.919 43.478 0.00 0.00 0.00 3.28
202 203 3.367703 CCCTTCTGAACATCACATTTGGC 60.368 47.826 0.00 0.00 0.00 4.52
203 204 3.495193 CTTCTGAACATCACATTTGGCG 58.505 45.455 0.00 0.00 0.00 5.69
204 205 1.811965 TCTGAACATCACATTTGGCGG 59.188 47.619 0.00 0.00 0.00 6.13
205 206 1.811965 CTGAACATCACATTTGGCGGA 59.188 47.619 0.00 0.00 0.00 5.54
206 207 2.228582 CTGAACATCACATTTGGCGGAA 59.771 45.455 0.00 0.00 0.00 4.30
207 208 2.625314 TGAACATCACATTTGGCGGAAA 59.375 40.909 0.00 0.00 0.00 3.13
208 209 3.257873 TGAACATCACATTTGGCGGAAAT 59.742 39.130 0.00 0.00 34.34 2.17
264 265 5.530915 TGTGAAGCACAATATTGTATAGGGC 59.469 40.000 20.39 17.99 41.69 5.19
265 266 5.765182 GTGAAGCACAATATTGTATAGGGCT 59.235 40.000 20.39 19.77 39.91 5.19
266 267 5.764686 TGAAGCACAATATTGTATAGGGCTG 59.235 40.000 23.40 11.09 39.91 4.85
267 268 4.655963 AGCACAATATTGTATAGGGCTGG 58.344 43.478 22.53 9.91 39.91 4.85
268 269 4.350816 AGCACAATATTGTATAGGGCTGGA 59.649 41.667 22.53 0.00 39.91 3.86
269 270 5.014544 AGCACAATATTGTATAGGGCTGGAT 59.985 40.000 22.53 5.84 39.91 3.41
270 271 6.215431 AGCACAATATTGTATAGGGCTGGATA 59.785 38.462 22.53 0.00 39.91 2.59
271 272 7.056635 GCACAATATTGTATAGGGCTGGATAT 58.943 38.462 20.39 0.00 39.91 1.63
272 273 7.557719 GCACAATATTGTATAGGGCTGGATATT 59.442 37.037 20.39 0.00 39.91 1.28
273 274 8.896744 CACAATATTGTATAGGGCTGGATATTG 58.103 37.037 20.39 10.12 39.91 1.90
274 275 8.614814 ACAATATTGTATAGGGCTGGATATTGT 58.385 33.333 19.51 11.10 41.06 2.71
275 276 9.466497 CAATATTGTATAGGGCTGGATATTGTT 57.534 33.333 7.32 0.00 34.07 2.83
276 277 9.686683 AATATTGTATAGGGCTGGATATTGTTC 57.313 33.333 0.00 0.00 0.00 3.18
277 278 6.508030 TTGTATAGGGCTGGATATTGTTCA 57.492 37.500 0.00 0.00 0.00 3.18
278 279 6.702449 TGTATAGGGCTGGATATTGTTCAT 57.298 37.500 0.00 0.00 0.00 2.57
279 280 6.475504 TGTATAGGGCTGGATATTGTTCATG 58.524 40.000 0.00 0.00 0.00 3.07
280 281 3.234234 AGGGCTGGATATTGTTCATGG 57.766 47.619 0.00 0.00 0.00 3.66
281 282 2.785269 AGGGCTGGATATTGTTCATGGA 59.215 45.455 0.00 0.00 0.00 3.41
282 283 3.152341 GGGCTGGATATTGTTCATGGAG 58.848 50.000 0.00 0.00 0.00 3.86
283 284 3.435601 GGGCTGGATATTGTTCATGGAGT 60.436 47.826 0.00 0.00 0.00 3.85
284 285 3.567164 GGCTGGATATTGTTCATGGAGTG 59.433 47.826 0.00 0.00 0.00 3.51
285 286 4.202441 GCTGGATATTGTTCATGGAGTGT 58.798 43.478 0.00 0.00 0.00 3.55
286 287 5.368145 GCTGGATATTGTTCATGGAGTGTA 58.632 41.667 0.00 0.00 0.00 2.90
287 288 5.468072 GCTGGATATTGTTCATGGAGTGTAG 59.532 44.000 0.00 0.00 0.00 2.74
288 289 5.368145 TGGATATTGTTCATGGAGTGTAGC 58.632 41.667 0.00 0.00 0.00 3.58
289 290 5.104569 TGGATATTGTTCATGGAGTGTAGCA 60.105 40.000 0.00 0.00 0.00 3.49
290 291 6.000219 GGATATTGTTCATGGAGTGTAGCAT 59.000 40.000 0.00 0.00 0.00 3.79
291 292 6.488006 GGATATTGTTCATGGAGTGTAGCATT 59.512 38.462 0.00 0.00 0.00 3.56
292 293 7.661437 GGATATTGTTCATGGAGTGTAGCATTA 59.339 37.037 0.00 0.00 0.00 1.90
293 294 6.683974 ATTGTTCATGGAGTGTAGCATTAC 57.316 37.500 0.00 0.00 0.00 1.89
294 295 4.513442 TGTTCATGGAGTGTAGCATTACC 58.487 43.478 0.00 0.00 0.00 2.85
295 296 4.225042 TGTTCATGGAGTGTAGCATTACCT 59.775 41.667 0.00 0.00 0.00 3.08
296 297 5.186198 GTTCATGGAGTGTAGCATTACCTT 58.814 41.667 0.00 0.00 0.00 3.50
297 298 4.769688 TCATGGAGTGTAGCATTACCTTG 58.230 43.478 0.00 0.00 0.00 3.61
298 299 4.225042 TCATGGAGTGTAGCATTACCTTGT 59.775 41.667 0.00 0.00 0.00 3.16
299 300 4.202245 TGGAGTGTAGCATTACCTTGTC 57.798 45.455 0.00 0.00 0.00 3.18
300 301 3.580895 TGGAGTGTAGCATTACCTTGTCA 59.419 43.478 0.00 0.00 0.00 3.58
301 302 3.933332 GGAGTGTAGCATTACCTTGTCAC 59.067 47.826 0.00 0.00 0.00 3.67
302 303 4.322801 GGAGTGTAGCATTACCTTGTCACT 60.323 45.833 0.00 0.00 37.56 3.41
303 304 5.228945 AGTGTAGCATTACCTTGTCACTT 57.771 39.130 0.00 0.00 32.15 3.16
304 305 6.354794 AGTGTAGCATTACCTTGTCACTTA 57.645 37.500 0.00 0.00 32.15 2.24
305 306 6.947464 AGTGTAGCATTACCTTGTCACTTAT 58.053 36.000 0.00 0.00 32.15 1.73
306 307 7.042335 AGTGTAGCATTACCTTGTCACTTATC 58.958 38.462 0.00 0.00 32.15 1.75
307 308 6.258068 GTGTAGCATTACCTTGTCACTTATCC 59.742 42.308 0.00 0.00 0.00 2.59
308 309 5.700402 AGCATTACCTTGTCACTTATCCT 57.300 39.130 0.00 0.00 0.00 3.24
309 310 5.675538 AGCATTACCTTGTCACTTATCCTC 58.324 41.667 0.00 0.00 0.00 3.71
310 311 4.816925 GCATTACCTTGTCACTTATCCTCC 59.183 45.833 0.00 0.00 0.00 4.30
311 312 5.629133 GCATTACCTTGTCACTTATCCTCCA 60.629 44.000 0.00 0.00 0.00 3.86
312 313 6.414732 CATTACCTTGTCACTTATCCTCCAA 58.585 40.000 0.00 0.00 0.00 3.53
313 314 4.559862 ACCTTGTCACTTATCCTCCAAG 57.440 45.455 0.00 0.00 0.00 3.61
314 315 4.168101 ACCTTGTCACTTATCCTCCAAGA 58.832 43.478 0.00 0.00 32.96 3.02
315 316 4.597507 ACCTTGTCACTTATCCTCCAAGAA 59.402 41.667 0.00 0.00 32.96 2.52
316 317 5.251700 ACCTTGTCACTTATCCTCCAAGAAT 59.748 40.000 0.00 0.00 32.96 2.40
317 318 5.819901 CCTTGTCACTTATCCTCCAAGAATC 59.180 44.000 0.00 0.00 32.96 2.52
318 319 6.352565 CCTTGTCACTTATCCTCCAAGAATCT 60.353 42.308 0.00 0.00 32.96 2.40
319 320 7.147655 CCTTGTCACTTATCCTCCAAGAATCTA 60.148 40.741 0.00 0.00 32.96 1.98
320 321 7.733773 TGTCACTTATCCTCCAAGAATCTAA 57.266 36.000 0.00 0.00 0.00 2.10
321 322 8.324191 TGTCACTTATCCTCCAAGAATCTAAT 57.676 34.615 0.00 0.00 0.00 1.73
322 323 8.772250 TGTCACTTATCCTCCAAGAATCTAATT 58.228 33.333 0.00 0.00 0.00 1.40
323 324 9.620259 GTCACTTATCCTCCAAGAATCTAATTT 57.380 33.333 0.00 0.00 0.00 1.82
324 325 9.838339 TCACTTATCCTCCAAGAATCTAATTTC 57.162 33.333 0.00 0.00 0.00 2.17
325 326 9.844257 CACTTATCCTCCAAGAATCTAATTTCT 57.156 33.333 0.00 0.00 37.56 2.52
326 327 9.844257 ACTTATCCTCCAAGAATCTAATTTCTG 57.156 33.333 0.00 0.00 36.12 3.02
329 330 6.352516 TCCTCCAAGAATCTAATTTCTGAGC 58.647 40.000 0.00 0.00 36.12 4.26
330 331 5.530543 CCTCCAAGAATCTAATTTCTGAGCC 59.469 44.000 0.00 0.00 36.12 4.70
331 332 6.065976 TCCAAGAATCTAATTTCTGAGCCA 57.934 37.500 0.00 0.00 36.12 4.75
332 333 6.666678 TCCAAGAATCTAATTTCTGAGCCAT 58.333 36.000 0.00 0.00 36.12 4.40
333 334 6.769822 TCCAAGAATCTAATTTCTGAGCCATC 59.230 38.462 0.00 0.00 36.12 3.51
334 335 6.016443 CCAAGAATCTAATTTCTGAGCCATCC 60.016 42.308 0.00 0.00 36.12 3.51
335 336 6.512514 AGAATCTAATTTCTGAGCCATCCT 57.487 37.500 0.00 0.00 34.68 3.24
336 337 6.909076 AGAATCTAATTTCTGAGCCATCCTT 58.091 36.000 0.00 0.00 34.68 3.36
337 338 8.038862 AGAATCTAATTTCTGAGCCATCCTTA 57.961 34.615 0.00 0.00 34.68 2.69
338 339 8.497745 AGAATCTAATTTCTGAGCCATCCTTAA 58.502 33.333 0.00 0.00 34.68 1.85
339 340 9.294614 GAATCTAATTTCTGAGCCATCCTTAAT 57.705 33.333 0.00 0.00 0.00 1.40
340 341 8.632906 ATCTAATTTCTGAGCCATCCTTAATG 57.367 34.615 0.00 0.00 34.93 1.90
341 342 7.805163 TCTAATTTCTGAGCCATCCTTAATGA 58.195 34.615 0.00 0.00 37.59 2.57
342 343 8.274322 TCTAATTTCTGAGCCATCCTTAATGAA 58.726 33.333 0.00 0.00 37.59 2.57
343 344 6.956202 ATTTCTGAGCCATCCTTAATGAAG 57.044 37.500 0.00 0.00 37.59 3.02
344 345 5.698741 TTCTGAGCCATCCTTAATGAAGA 57.301 39.130 0.00 0.00 37.59 2.87
345 346 5.698741 TCTGAGCCATCCTTAATGAAGAA 57.301 39.130 0.00 0.00 37.59 2.52
346 347 5.678583 TCTGAGCCATCCTTAATGAAGAAG 58.321 41.667 0.00 0.00 37.59 2.85
347 348 4.785301 TGAGCCATCCTTAATGAAGAAGG 58.215 43.478 0.00 0.00 44.25 3.46
356 357 6.625873 CCTTAATGAAGAAGGAACCATAGC 57.374 41.667 0.00 0.00 45.52 2.97
357 358 5.237344 CCTTAATGAAGAAGGAACCATAGCG 59.763 44.000 0.00 0.00 45.52 4.26
358 359 2.691409 TGAAGAAGGAACCATAGCGG 57.309 50.000 0.00 0.00 42.50 5.52
359 360 2.184533 TGAAGAAGGAACCATAGCGGA 58.815 47.619 0.00 0.00 38.63 5.54
360 361 2.569853 TGAAGAAGGAACCATAGCGGAA 59.430 45.455 0.00 0.00 38.63 4.30
361 362 2.990066 AGAAGGAACCATAGCGGAAG 57.010 50.000 0.00 0.00 38.63 3.46
362 363 2.467880 AGAAGGAACCATAGCGGAAGA 58.532 47.619 0.00 0.00 38.63 2.87
363 364 2.838202 AGAAGGAACCATAGCGGAAGAA 59.162 45.455 0.00 0.00 38.63 2.52
364 365 3.263425 AGAAGGAACCATAGCGGAAGAAA 59.737 43.478 0.00 0.00 38.63 2.52
365 366 3.933861 AGGAACCATAGCGGAAGAAAT 57.066 42.857 0.00 0.00 38.63 2.17
366 367 5.130477 AGAAGGAACCATAGCGGAAGAAATA 59.870 40.000 0.00 0.00 38.63 1.40
367 368 5.568620 AGGAACCATAGCGGAAGAAATAT 57.431 39.130 0.00 0.00 38.63 1.28
368 369 5.941788 AGGAACCATAGCGGAAGAAATATT 58.058 37.500 0.00 0.00 38.63 1.28
369 370 6.365520 AGGAACCATAGCGGAAGAAATATTT 58.634 36.000 0.00 0.00 38.63 1.40
370 371 6.486993 AGGAACCATAGCGGAAGAAATATTTC 59.513 38.462 18.70 18.70 38.63 2.17
371 372 6.486993 GGAACCATAGCGGAAGAAATATTTCT 59.513 38.462 22.43 22.43 43.22 2.52
401 402 5.566429 GCCATTTGTTGTGTGAATATGGTGA 60.566 40.000 0.00 0.00 34.84 4.02
410 411 7.643569 TGTGTGAATATGGTGATTGCTTTAT 57.356 32.000 0.00 0.00 0.00 1.40
411 412 7.706159 TGTGTGAATATGGTGATTGCTTTATC 58.294 34.615 0.00 0.00 0.00 1.75
414 415 9.625747 TGTGAATATGGTGATTGCTTTATCTAA 57.374 29.630 0.00 0.00 0.00 2.10
455 456 7.382488 GTGAGCTTTGAAAGGATAAAGGTTTTC 59.618 37.037 7.09 0.00 42.62 2.29
476 478 6.548441 TTCCGGTTGAACTACATAAAAGTG 57.452 37.500 0.00 0.00 0.00 3.16
478 480 6.757237 TCCGGTTGAACTACATAAAAGTGTA 58.243 36.000 0.00 0.00 33.62 2.90
523 525 5.551305 AGATTTTCACCCCCAAAAAGAAG 57.449 39.130 0.00 0.00 0.00 2.85
526 528 5.763876 TTTTCACCCCCAAAAAGAAGAAA 57.236 34.783 0.00 0.00 0.00 2.52
556 558 7.619512 ACACTCTTAAGGATAAATCTAGGGG 57.380 40.000 1.85 0.00 0.00 4.79
565 567 0.988832 AAATCTAGGGGGCAACGTGA 59.011 50.000 0.00 0.00 37.60 4.35
572 574 2.265904 GGGGCAACGTGAACTTCCC 61.266 63.158 0.00 0.00 37.60 3.97
589 591 0.987294 CCCTGGAGCCAGAGAAAAGA 59.013 55.000 17.88 0.00 46.30 2.52
597 599 2.305343 AGCCAGAGAAAAGAGATGCAGT 59.695 45.455 0.00 0.00 0.00 4.40
672 687 1.266989 GCAACGAGTGGGAGGAAAAAG 59.733 52.381 0.00 0.00 0.00 2.27
673 688 2.846193 CAACGAGTGGGAGGAAAAAGA 58.154 47.619 0.00 0.00 0.00 2.52
674 689 2.545537 ACGAGTGGGAGGAAAAAGAC 57.454 50.000 0.00 0.00 0.00 3.01
675 690 2.047830 ACGAGTGGGAGGAAAAAGACT 58.952 47.619 0.00 0.00 0.00 3.24
676 691 2.037381 ACGAGTGGGAGGAAAAAGACTC 59.963 50.000 0.00 0.00 0.00 3.36
678 693 1.157585 GTGGGAGGAAAAAGACTCGC 58.842 55.000 0.00 0.00 44.22 5.03
763 779 2.679132 AAGACACGTGCGAGCGAACT 62.679 55.000 17.22 0.00 35.59 3.01
764 780 2.279252 ACACGTGCGAGCGAACTT 60.279 55.556 17.22 0.00 35.59 2.66
765 781 2.168621 CACGTGCGAGCGAACTTG 59.831 61.111 0.82 0.00 35.59 3.16
793 836 2.046314 CGCTCCAACCAACCGGAT 60.046 61.111 9.46 0.00 35.59 4.18
861 921 0.749818 TGCCAAGAAAGCACGTCCAA 60.750 50.000 0.00 0.00 34.69 3.53
868 928 1.782028 AAAGCACGTCCAAGCCGAAC 61.782 55.000 0.00 0.00 0.00 3.95
881 941 4.141914 CCAAGCCGAACCTCTCTATAAAGT 60.142 45.833 0.00 0.00 0.00 2.66
882 942 5.068723 CCAAGCCGAACCTCTCTATAAAGTA 59.931 44.000 0.00 0.00 0.00 2.24
883 943 5.771153 AGCCGAACCTCTCTATAAAGTAC 57.229 43.478 0.00 0.00 0.00 2.73
895 955 6.037940 TCTCTATAAAGTACTACGTGCAGTGG 59.962 42.308 0.00 0.00 37.35 4.00
899 959 1.268899 AGTACTACGTGCAGTGGACAC 59.731 52.381 15.55 4.91 35.12 3.67
940 1002 6.067350 AGAAAAATAAGCATCCATCTCCTCC 58.933 40.000 0.00 0.00 0.00 4.30
941 1003 4.379302 AAATAAGCATCCATCTCCTCCC 57.621 45.455 0.00 0.00 0.00 4.30
1210 1319 2.622436 CCGTCCATGAGTTTCTCTTCC 58.378 52.381 0.00 0.00 0.00 3.46
1213 1322 3.677424 CGTCCATGAGTTTCTCTTCCTCC 60.677 52.174 0.00 0.00 0.00 4.30
1259 1384 7.490000 CCACGGTAGTATAGAGATTTTGACTT 58.510 38.462 0.00 0.00 0.00 3.01
1260 1385 7.435488 CCACGGTAGTATAGAGATTTTGACTTG 59.565 40.741 0.00 0.00 0.00 3.16
1261 1386 7.974501 CACGGTAGTATAGAGATTTTGACTTGT 59.025 37.037 0.00 0.00 0.00 3.16
1262 1387 8.189460 ACGGTAGTATAGAGATTTTGACTTGTC 58.811 37.037 0.00 0.00 0.00 3.18
1263 1388 8.188799 CGGTAGTATAGAGATTTTGACTTGTCA 58.811 37.037 0.00 0.00 0.00 3.58
1266 1391 8.954950 AGTATAGAGATTTTGACTTGTCATGG 57.045 34.615 4.18 0.00 0.00 3.66
1267 1392 8.762645 AGTATAGAGATTTTGACTTGTCATGGA 58.237 33.333 4.18 0.00 0.00 3.41
1268 1393 9.039870 GTATAGAGATTTTGACTTGTCATGGAG 57.960 37.037 4.18 0.00 0.00 3.86
1269 1394 4.699257 AGAGATTTTGACTTGTCATGGAGC 59.301 41.667 4.18 0.00 0.00 4.70
1270 1395 4.660168 AGATTTTGACTTGTCATGGAGCT 58.340 39.130 4.18 0.00 0.00 4.09
1271 1396 4.458295 AGATTTTGACTTGTCATGGAGCTG 59.542 41.667 4.18 0.00 0.00 4.24
1272 1397 2.936919 TTGACTTGTCATGGAGCTGT 57.063 45.000 4.18 0.00 0.00 4.40
1273 1398 4.350368 TTTGACTTGTCATGGAGCTGTA 57.650 40.909 4.18 0.00 0.00 2.74
1274 1399 3.599730 TGACTTGTCATGGAGCTGTAG 57.400 47.619 0.00 0.00 0.00 2.74
1275 1400 2.275318 GACTTGTCATGGAGCTGTAGC 58.725 52.381 0.00 0.00 42.49 3.58
1291 1416 4.321527 GCTGTAGCTGCCTTTGAATCTTTT 60.322 41.667 0.00 0.00 38.21 2.27
1293 1418 6.254281 TGTAGCTGCCTTTGAATCTTTTAC 57.746 37.500 0.00 0.00 0.00 2.01
1294 1419 4.425577 AGCTGCCTTTGAATCTTTTACG 57.574 40.909 0.00 0.00 0.00 3.18
1308 1433 3.442977 TCTTTTACGGACTAGTCTCCAGC 59.557 47.826 21.88 4.53 0.00 4.85
1321 1446 7.168219 ACTAGTCTCCAGCAATTTACAATCAA 58.832 34.615 0.00 0.00 0.00 2.57
1349 1474 1.068816 GTGCCTTTTTATGCCGACGTT 60.069 47.619 0.00 0.00 0.00 3.99
1375 1500 0.949397 CATGGACCCATGCTGAATCG 59.051 55.000 15.27 0.00 45.71 3.34
1376 1501 0.548031 ATGGACCCATGCTGAATCGT 59.452 50.000 0.00 0.00 35.03 3.73
1377 1502 0.327924 TGGACCCATGCTGAATCGTT 59.672 50.000 0.00 0.00 0.00 3.85
1379 1504 0.099436 GACCCATGCTGAATCGTTGC 59.901 55.000 0.00 0.00 0.00 4.17
1380 1505 0.608856 ACCCATGCTGAATCGTTGCA 60.609 50.000 0.00 0.00 41.13 4.08
1381 1506 0.099968 CCCATGCTGAATCGTTGCAG 59.900 55.000 0.00 0.00 40.18 4.41
1423 1558 5.463724 CCTTTTTAGCTAGCTAGTGGAATCG 59.536 44.000 23.03 9.36 0.00 3.34
1427 1562 3.822940 AGCTAGCTAGTGGAATCGTACT 58.177 45.455 17.69 3.72 0.00 2.73
1428 1563 4.970711 AGCTAGCTAGTGGAATCGTACTA 58.029 43.478 17.69 0.00 0.00 1.82
1485 1622 6.690194 ACATCAGCAATTTCTAGTGGAATC 57.310 37.500 0.00 0.00 33.53 2.52
1487 1624 5.178096 TCAGCAATTTCTAGTGGAATCCA 57.822 39.130 0.00 0.00 33.53 3.41
1488 1625 5.188434 TCAGCAATTTCTAGTGGAATCCAG 58.812 41.667 0.27 0.00 32.34 3.86
1489 1626 5.045651 TCAGCAATTTCTAGTGGAATCCAGA 60.046 40.000 0.27 0.00 32.34 3.86
1490 1627 5.826737 CAGCAATTTCTAGTGGAATCCAGAT 59.173 40.000 0.27 0.00 32.34 2.90
1504 1641 8.861086 GTGGAATCCAGATAGATAGACTTTGTA 58.139 37.037 0.27 0.00 32.34 2.41
1528 1665 1.068055 CAGCAATTGACTTGTCCTGGC 60.068 52.381 10.34 0.00 37.18 4.85
1529 1666 1.202976 AGCAATTGACTTGTCCTGGCT 60.203 47.619 10.34 0.00 37.18 4.75
1537 1674 1.294659 CTTGTCCTGGCTTCTCGTGC 61.295 60.000 0.00 0.00 0.00 5.34
1550 1687 4.962122 CGTGCGTGTGGCTGCAAC 62.962 66.667 0.00 0.00 43.75 4.17
1879 2016 4.253257 CGCCTCTACGACGGCTCC 62.253 72.222 0.00 0.00 44.11 4.70
1972 2109 3.681835 GACGGCGAGACCCACACT 61.682 66.667 16.62 0.00 33.26 3.55
2100 2237 2.865603 CGACGACGAGACTGTGCG 60.866 66.667 0.00 0.00 42.66 5.34
2104 2241 2.179517 GACGAGACTGTGCGGGAG 59.820 66.667 0.00 0.00 0.00 4.30
2151 2288 0.038159 CAGGAGGTCAAGACGGTGAC 60.038 60.000 7.42 7.42 45.99 3.67
2209 2346 3.443099 TGAGAATCACCTACAGATGCG 57.557 47.619 0.00 0.00 42.56 4.73
2255 2395 3.403936 AGCCACGCTTTCAAGTCTT 57.596 47.368 0.00 0.00 33.89 3.01
2290 2434 0.527565 AGATGGTGCAAAATGCCGAC 59.472 50.000 0.00 0.00 44.23 4.79
2372 2516 4.331968 ACGAAGTGATTTTTGGCATCCTA 58.668 39.130 0.00 0.00 42.51 2.94
2380 2524 6.260271 GTGATTTTTGGCATCCTACTACTACC 59.740 42.308 0.00 0.00 0.00 3.18
2395 2540 4.422592 ACTACTACCATCCCCTCCTATTCA 59.577 45.833 0.00 0.00 0.00 2.57
2483 2635 4.323417 TGTAAGCTGTGGATGTTACCTTG 58.677 43.478 0.00 0.00 0.00 3.61
2514 2671 9.897744 ATCGTATATGAATGTTATTTTTGCCAG 57.102 29.630 0.00 0.00 0.00 4.85
2540 2697 9.057089 GTTTAGCTATATGTAAGTTGCCTGAAT 57.943 33.333 0.00 0.00 0.00 2.57
2571 2728 2.151202 GGCCAGTCGATTTTTCTGACA 58.849 47.619 0.00 0.00 35.09 3.58
2601 2758 1.086634 GCTTCAAGATCCGCGCTTCT 61.087 55.000 5.56 1.12 0.00 2.85
2602 2759 0.649475 CTTCAAGATCCGCGCTTCTG 59.351 55.000 5.56 0.63 0.00 3.02
2603 2760 0.246360 TTCAAGATCCGCGCTTCTGA 59.754 50.000 5.56 2.97 0.00 3.27
2668 2829 0.755327 ACTGACCAGTGTTTTGGGCC 60.755 55.000 0.00 0.00 46.35 5.80
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.784176 CCGTGTCGGTTGATATTAATAAGAAG 58.216 38.462 0.00 0.00 42.73 2.85
19 20 1.092348 TGATCCAGTCTACCGTGTCG 58.908 55.000 0.00 0.00 0.00 4.35
20 21 3.512680 CTTTGATCCAGTCTACCGTGTC 58.487 50.000 0.00 0.00 0.00 3.67
21 22 2.353803 GCTTTGATCCAGTCTACCGTGT 60.354 50.000 0.00 0.00 0.00 4.49
22 23 2.093973 AGCTTTGATCCAGTCTACCGTG 60.094 50.000 0.00 0.00 0.00 4.94
23 24 2.166664 GAGCTTTGATCCAGTCTACCGT 59.833 50.000 0.00 0.00 0.00 4.83
24 25 2.428890 AGAGCTTTGATCCAGTCTACCG 59.571 50.000 0.00 0.00 0.00 4.02
25 26 5.799827 ATAGAGCTTTGATCCAGTCTACC 57.200 43.478 0.00 0.00 0.00 3.18
26 27 7.278461 TGTATAGAGCTTTGATCCAGTCTAC 57.722 40.000 0.00 0.00 0.00 2.59
27 28 9.237187 CTATGTATAGAGCTTTGATCCAGTCTA 57.763 37.037 0.00 0.00 32.05 2.59
28 29 6.992664 ATGTATAGAGCTTTGATCCAGTCT 57.007 37.500 0.00 0.00 0.00 3.24
29 30 8.116651 TCTATGTATAGAGCTTTGATCCAGTC 57.883 38.462 0.00 0.00 34.63 3.51
30 31 8.484214 TTCTATGTATAGAGCTTTGATCCAGT 57.516 34.615 2.21 0.00 40.23 4.00
31 32 9.585099 GATTCTATGTATAGAGCTTTGATCCAG 57.415 37.037 2.21 0.00 40.23 3.86
32 33 8.535335 GGATTCTATGTATAGAGCTTTGATCCA 58.465 37.037 16.17 0.00 40.23 3.41
33 34 8.535335 TGGATTCTATGTATAGAGCTTTGATCC 58.465 37.037 15.09 15.09 40.23 3.36
34 35 9.364989 GTGGATTCTATGTATAGAGCTTTGATC 57.635 37.037 2.21 2.40 40.23 2.92
35 36 9.099071 AGTGGATTCTATGTATAGAGCTTTGAT 57.901 33.333 2.21 0.00 40.23 2.57
36 37 8.363390 CAGTGGATTCTATGTATAGAGCTTTGA 58.637 37.037 2.21 0.00 40.23 2.69
37 38 8.363390 TCAGTGGATTCTATGTATAGAGCTTTG 58.637 37.037 2.21 0.24 40.23 2.77
38 39 8.484214 TCAGTGGATTCTATGTATAGAGCTTT 57.516 34.615 2.21 0.00 40.23 3.51
39 40 7.947332 TCTCAGTGGATTCTATGTATAGAGCTT 59.053 37.037 2.21 0.00 40.23 3.74
40 41 7.465960 TCTCAGTGGATTCTATGTATAGAGCT 58.534 38.462 0.00 0.00 40.23 4.09
41 42 7.695480 TCTCAGTGGATTCTATGTATAGAGC 57.305 40.000 2.21 0.22 40.23 4.09
46 47 8.160106 GGGAAATTCTCAGTGGATTCTATGTAT 58.840 37.037 0.00 0.00 0.00 2.29
47 48 7.127186 TGGGAAATTCTCAGTGGATTCTATGTA 59.873 37.037 0.00 0.00 0.00 2.29
48 49 6.069440 TGGGAAATTCTCAGTGGATTCTATGT 60.069 38.462 0.00 0.00 0.00 2.29
49 50 6.359804 TGGGAAATTCTCAGTGGATTCTATG 58.640 40.000 0.00 0.00 0.00 2.23
50 51 6.581388 TGGGAAATTCTCAGTGGATTCTAT 57.419 37.500 0.00 0.00 0.00 1.98
51 52 6.581388 ATGGGAAATTCTCAGTGGATTCTA 57.419 37.500 0.86 0.00 25.53 2.10
52 53 4.934797 TGGGAAATTCTCAGTGGATTCT 57.065 40.909 0.00 0.00 0.00 2.40
53 54 5.068329 GGAATGGGAAATTCTCAGTGGATTC 59.932 44.000 0.00 0.00 25.53 2.52
54 55 4.958581 GGAATGGGAAATTCTCAGTGGATT 59.041 41.667 0.00 0.00 25.53 3.01
55 56 4.540715 GGAATGGGAAATTCTCAGTGGAT 58.459 43.478 0.00 0.00 25.53 3.41
56 57 3.309121 GGGAATGGGAAATTCTCAGTGGA 60.309 47.826 0.00 0.00 25.53 4.02
57 58 3.026694 GGGAATGGGAAATTCTCAGTGG 58.973 50.000 0.00 0.00 25.53 4.00
58 59 3.700538 TGGGAATGGGAAATTCTCAGTG 58.299 45.455 0.00 0.00 33.92 3.66
59 60 4.264532 ACATGGGAATGGGAAATTCTCAGT 60.265 41.667 0.86 0.00 41.28 3.41
60 61 4.284178 ACATGGGAATGGGAAATTCTCAG 58.716 43.478 0.86 2.61 41.28 3.35
61 62 4.335735 ACATGGGAATGGGAAATTCTCA 57.664 40.909 0.00 0.00 42.07 3.27
62 63 4.829492 CCTACATGGGAATGGGAAATTCTC 59.171 45.833 0.00 0.00 0.00 2.87
63 64 4.232820 ACCTACATGGGAATGGGAAATTCT 59.767 41.667 0.00 0.00 41.11 2.40
64 65 4.546674 ACCTACATGGGAATGGGAAATTC 58.453 43.478 0.00 0.00 41.11 2.17
65 66 4.625225 ACCTACATGGGAATGGGAAATT 57.375 40.909 0.00 0.00 41.11 1.82
66 67 4.546674 GAACCTACATGGGAATGGGAAAT 58.453 43.478 0.00 0.00 41.11 2.17
67 68 3.309556 GGAACCTACATGGGAATGGGAAA 60.310 47.826 0.00 0.00 41.11 3.13
68 69 2.243736 GGAACCTACATGGGAATGGGAA 59.756 50.000 0.00 0.00 41.11 3.97
69 70 1.850345 GGAACCTACATGGGAATGGGA 59.150 52.381 0.00 0.00 41.11 4.37
70 71 1.568597 TGGAACCTACATGGGAATGGG 59.431 52.381 0.00 0.00 41.11 4.00
71 72 3.023832 GTTGGAACCTACATGGGAATGG 58.976 50.000 0.00 0.00 41.11 3.16
72 73 2.682856 CGTTGGAACCTACATGGGAATG 59.317 50.000 0.00 0.00 41.11 2.67
73 74 2.574369 TCGTTGGAACCTACATGGGAAT 59.426 45.455 0.00 0.00 41.11 3.01
74 75 1.979308 TCGTTGGAACCTACATGGGAA 59.021 47.619 0.00 0.00 41.11 3.97
75 76 1.646912 TCGTTGGAACCTACATGGGA 58.353 50.000 0.00 0.00 41.11 4.37
76 77 2.483014 TTCGTTGGAACCTACATGGG 57.517 50.000 0.00 0.00 41.11 4.00
77 78 4.938832 TGTATTTCGTTGGAACCTACATGG 59.061 41.667 0.00 0.00 42.93 3.66
78 79 6.509517 CGATGTATTTCGTTGGAACCTACATG 60.510 42.308 12.36 0.00 39.25 3.21
79 80 5.522460 CGATGTATTTCGTTGGAACCTACAT 59.478 40.000 6.30 9.32 40.47 2.29
80 81 4.865925 CGATGTATTTCGTTGGAACCTACA 59.134 41.667 6.30 0.00 36.11 2.74
81 82 4.269363 CCGATGTATTTCGTTGGAACCTAC 59.731 45.833 0.00 0.00 38.57 3.18
82 83 4.160065 TCCGATGTATTTCGTTGGAACCTA 59.840 41.667 0.00 0.00 41.31 3.08
83 84 3.055675 TCCGATGTATTTCGTTGGAACCT 60.056 43.478 0.00 0.00 41.31 3.50
84 85 3.063045 GTCCGATGTATTTCGTTGGAACC 59.937 47.826 0.00 0.00 44.57 3.62
85 86 3.063045 GGTCCGATGTATTTCGTTGGAAC 59.937 47.826 0.00 0.00 44.57 3.62
86 87 3.264104 GGTCCGATGTATTTCGTTGGAA 58.736 45.455 0.00 0.00 44.57 3.53
87 88 2.419021 GGGTCCGATGTATTTCGTTGGA 60.419 50.000 0.00 0.00 41.83 3.53
88 89 1.937899 GGGTCCGATGTATTTCGTTGG 59.062 52.381 0.00 0.00 37.42 3.77
89 90 2.901249 AGGGTCCGATGTATTTCGTTG 58.099 47.619 0.00 0.00 37.42 4.10
90 91 3.267483 CAAGGGTCCGATGTATTTCGTT 58.733 45.455 0.00 0.00 37.42 3.85
91 92 2.235402 ACAAGGGTCCGATGTATTTCGT 59.765 45.455 0.00 0.00 37.42 3.85
92 93 2.607635 CACAAGGGTCCGATGTATTTCG 59.392 50.000 0.00 0.00 38.83 3.46
93 94 3.621715 GTCACAAGGGTCCGATGTATTTC 59.378 47.826 0.00 0.00 0.00 2.17
94 95 3.008594 TGTCACAAGGGTCCGATGTATTT 59.991 43.478 0.00 0.00 0.00 1.40
95 96 2.569853 TGTCACAAGGGTCCGATGTATT 59.430 45.455 0.00 0.00 0.00 1.89
96 97 2.184533 TGTCACAAGGGTCCGATGTAT 58.815 47.619 0.00 0.00 0.00 2.29
97 98 1.634960 TGTCACAAGGGTCCGATGTA 58.365 50.000 0.00 0.00 0.00 2.29
98 99 0.762418 TTGTCACAAGGGTCCGATGT 59.238 50.000 0.00 0.00 0.00 3.06
99 100 1.890876 TTTGTCACAAGGGTCCGATG 58.109 50.000 0.00 0.00 0.00 3.84
100 101 2.224769 ACATTTGTCACAAGGGTCCGAT 60.225 45.455 0.00 0.00 0.00 4.18
101 102 1.142060 ACATTTGTCACAAGGGTCCGA 59.858 47.619 0.00 0.00 0.00 4.55
102 103 1.604604 ACATTTGTCACAAGGGTCCG 58.395 50.000 0.00 0.00 0.00 4.79
103 104 2.817844 GGTACATTTGTCACAAGGGTCC 59.182 50.000 0.00 0.00 0.00 4.46
104 105 2.482721 CGGTACATTTGTCACAAGGGTC 59.517 50.000 0.00 0.00 0.00 4.46
105 106 2.158726 ACGGTACATTTGTCACAAGGGT 60.159 45.455 0.00 0.00 0.00 4.34
106 107 2.225491 CACGGTACATTTGTCACAAGGG 59.775 50.000 0.00 0.00 0.00 3.95
107 108 2.225491 CCACGGTACATTTGTCACAAGG 59.775 50.000 0.00 0.00 0.00 3.61
108 109 2.350388 GCCACGGTACATTTGTCACAAG 60.350 50.000 0.00 0.00 0.00 3.16
109 110 1.604755 GCCACGGTACATTTGTCACAA 59.395 47.619 0.00 0.00 0.00 3.33
110 111 1.202710 AGCCACGGTACATTTGTCACA 60.203 47.619 0.00 0.00 0.00 3.58
111 112 1.519408 AGCCACGGTACATTTGTCAC 58.481 50.000 0.00 0.00 0.00 3.67
112 113 2.933492 GCTAGCCACGGTACATTTGTCA 60.933 50.000 2.29 0.00 0.00 3.58
113 114 1.664151 GCTAGCCACGGTACATTTGTC 59.336 52.381 2.29 0.00 0.00 3.18
114 115 1.677820 GGCTAGCCACGGTACATTTGT 60.678 52.381 29.33 0.00 35.81 2.83
115 116 1.014352 GGCTAGCCACGGTACATTTG 58.986 55.000 29.33 0.00 35.81 2.32
116 117 0.461339 CGGCTAGCCACGGTACATTT 60.461 55.000 32.47 0.00 35.37 2.32
117 118 1.143183 CGGCTAGCCACGGTACATT 59.857 57.895 32.47 0.00 35.37 2.71
118 119 2.812499 CGGCTAGCCACGGTACAT 59.188 61.111 32.47 0.00 35.37 2.29
119 120 4.137872 GCGGCTAGCCACGGTACA 62.138 66.667 32.47 0.00 40.81 2.90
129 130 2.231529 ACATACTACTCCAGCGGCTAG 58.768 52.381 0.26 0.00 0.00 3.42
130 131 2.359981 ACATACTACTCCAGCGGCTA 57.640 50.000 0.26 0.00 0.00 3.93
131 132 1.409427 GAACATACTACTCCAGCGGCT 59.591 52.381 0.00 0.00 0.00 5.52
132 133 1.538419 GGAACATACTACTCCAGCGGC 60.538 57.143 0.00 0.00 0.00 6.53
133 134 1.754803 TGGAACATACTACTCCAGCGG 59.245 52.381 0.00 0.00 34.26 5.52
148 149 5.598830 TGGACCTAGACTCTAATCATGGAAC 59.401 44.000 0.00 0.00 0.00 3.62
149 150 5.777449 TGGACCTAGACTCTAATCATGGAA 58.223 41.667 0.00 0.00 0.00 3.53
150 151 5.403558 TGGACCTAGACTCTAATCATGGA 57.596 43.478 0.00 0.00 0.00 3.41
151 152 6.678568 ATTGGACCTAGACTCTAATCATGG 57.321 41.667 0.00 0.00 0.00 3.66
155 156 9.713713 GGATTTAATTGGACCTAGACTCTAATC 57.286 37.037 0.00 0.00 0.00 1.75
156 157 8.661345 GGGATTTAATTGGACCTAGACTCTAAT 58.339 37.037 0.00 0.00 0.00 1.73
157 158 7.849904 AGGGATTTAATTGGACCTAGACTCTAA 59.150 37.037 0.00 0.00 0.00 2.10
158 159 7.371043 AGGGATTTAATTGGACCTAGACTCTA 58.629 38.462 0.00 0.00 0.00 2.43
159 160 6.213525 AGGGATTTAATTGGACCTAGACTCT 58.786 40.000 0.00 0.00 0.00 3.24
160 161 6.502074 AGGGATTTAATTGGACCTAGACTC 57.498 41.667 0.00 0.00 0.00 3.36
161 162 6.678857 AGAAGGGATTTAATTGGACCTAGACT 59.321 38.462 0.00 0.00 0.00 3.24
162 163 6.768381 CAGAAGGGATTTAATTGGACCTAGAC 59.232 42.308 0.00 0.00 0.00 2.59
163 164 6.676632 TCAGAAGGGATTTAATTGGACCTAGA 59.323 38.462 0.00 0.00 0.00 2.43
164 165 6.900194 TCAGAAGGGATTTAATTGGACCTAG 58.100 40.000 0.00 0.00 0.00 3.02
165 166 6.901615 TCAGAAGGGATTTAATTGGACCTA 57.098 37.500 0.00 0.00 0.00 3.08
166 167 5.796502 TCAGAAGGGATTTAATTGGACCT 57.203 39.130 0.00 0.00 0.00 3.85
167 168 5.714806 TGTTCAGAAGGGATTTAATTGGACC 59.285 40.000 0.00 0.00 0.00 4.46
168 169 6.834168 TGTTCAGAAGGGATTTAATTGGAC 57.166 37.500 0.00 0.00 0.00 4.02
169 170 7.122650 GTGATGTTCAGAAGGGATTTAATTGGA 59.877 37.037 0.00 0.00 0.00 3.53
170 171 7.093814 TGTGATGTTCAGAAGGGATTTAATTGG 60.094 37.037 0.00 0.00 0.00 3.16
171 172 7.829725 TGTGATGTTCAGAAGGGATTTAATTG 58.170 34.615 0.00 0.00 0.00 2.32
172 173 8.599624 ATGTGATGTTCAGAAGGGATTTAATT 57.400 30.769 0.00 0.00 0.00 1.40
173 174 8.599624 AATGTGATGTTCAGAAGGGATTTAAT 57.400 30.769 0.00 0.00 0.00 1.40
174 175 8.306038 CAAATGTGATGTTCAGAAGGGATTTAA 58.694 33.333 0.00 0.00 0.00 1.52
175 176 7.093814 CCAAATGTGATGTTCAGAAGGGATTTA 60.094 37.037 0.00 0.00 0.00 1.40
176 177 6.295462 CCAAATGTGATGTTCAGAAGGGATTT 60.295 38.462 0.00 0.00 0.00 2.17
177 178 5.186409 CCAAATGTGATGTTCAGAAGGGATT 59.814 40.000 0.00 0.00 0.00 3.01
178 179 4.708421 CCAAATGTGATGTTCAGAAGGGAT 59.292 41.667 0.00 0.00 0.00 3.85
179 180 4.081406 CCAAATGTGATGTTCAGAAGGGA 58.919 43.478 0.00 0.00 0.00 4.20
180 181 3.367703 GCCAAATGTGATGTTCAGAAGGG 60.368 47.826 0.00 0.00 0.00 3.95
181 182 3.671433 CGCCAAATGTGATGTTCAGAAGG 60.671 47.826 0.00 0.00 0.00 3.46
182 183 3.495193 CGCCAAATGTGATGTTCAGAAG 58.505 45.455 0.00 0.00 0.00 2.85
183 184 2.228582 CCGCCAAATGTGATGTTCAGAA 59.771 45.455 0.00 0.00 0.00 3.02
184 185 1.811965 CCGCCAAATGTGATGTTCAGA 59.188 47.619 0.00 0.00 0.00 3.27
185 186 1.811965 TCCGCCAAATGTGATGTTCAG 59.188 47.619 0.00 0.00 0.00 3.02
186 187 1.902938 TCCGCCAAATGTGATGTTCA 58.097 45.000 0.00 0.00 0.00 3.18
187 188 3.296322 TTTCCGCCAAATGTGATGTTC 57.704 42.857 0.00 0.00 0.00 3.18
188 189 3.587923 CATTTCCGCCAAATGTGATGTT 58.412 40.909 9.00 0.00 44.55 2.71
189 190 3.235157 CATTTCCGCCAAATGTGATGT 57.765 42.857 9.00 0.00 44.55 3.06
214 215 2.423185 TGATGCTATCGCCAAGGTTTTG 59.577 45.455 0.00 0.00 34.43 2.44
215 216 2.423538 GTGATGCTATCGCCAAGGTTTT 59.576 45.455 0.00 0.00 33.78 2.43
216 217 2.017049 GTGATGCTATCGCCAAGGTTT 58.983 47.619 0.00 0.00 33.78 3.27
217 218 1.668419 GTGATGCTATCGCCAAGGTT 58.332 50.000 0.00 0.00 33.78 3.50
218 219 3.386543 GTGATGCTATCGCCAAGGT 57.613 52.632 0.00 0.00 33.78 3.50
224 225 3.386543 ACAAGGGTGATGCTATCGC 57.613 52.632 0.00 0.00 39.02 4.58
240 241 5.530915 GCCCTATACAATATTGTGCTTCACA 59.469 40.000 27.62 9.12 43.02 3.58
241 242 5.765182 AGCCCTATACAATATTGTGCTTCAC 59.235 40.000 27.62 14.50 42.31 3.18
242 243 5.764686 CAGCCCTATACAATATTGTGCTTCA 59.235 40.000 27.62 10.52 42.31 3.02
243 244 5.182001 CCAGCCCTATACAATATTGTGCTTC 59.818 44.000 27.62 13.16 42.31 3.86
244 245 5.072741 CCAGCCCTATACAATATTGTGCTT 58.927 41.667 27.62 15.83 42.31 3.91
245 246 4.350816 TCCAGCCCTATACAATATTGTGCT 59.649 41.667 27.62 23.10 42.31 4.40
246 247 4.651778 TCCAGCCCTATACAATATTGTGC 58.348 43.478 27.62 21.47 42.31 4.57
247 248 8.896744 CAATATCCAGCCCTATACAATATTGTG 58.103 37.037 27.62 13.63 42.31 3.33
248 249 8.614814 ACAATATCCAGCCCTATACAATATTGT 58.385 33.333 23.80 23.80 40.92 2.71
249 250 9.466497 AACAATATCCAGCCCTATACAATATTG 57.534 33.333 14.01 14.01 39.64 1.90
250 251 9.686683 GAACAATATCCAGCCCTATACAATATT 57.313 33.333 0.00 0.00 0.00 1.28
251 252 8.835734 TGAACAATATCCAGCCCTATACAATAT 58.164 33.333 0.00 0.00 0.00 1.28
252 253 8.213489 TGAACAATATCCAGCCCTATACAATA 57.787 34.615 0.00 0.00 0.00 1.90
253 254 7.090319 TGAACAATATCCAGCCCTATACAAT 57.910 36.000 0.00 0.00 0.00 2.71
254 255 6.508030 TGAACAATATCCAGCCCTATACAA 57.492 37.500 0.00 0.00 0.00 2.41
255 256 6.475504 CATGAACAATATCCAGCCCTATACA 58.524 40.000 0.00 0.00 0.00 2.29
256 257 5.882557 CCATGAACAATATCCAGCCCTATAC 59.117 44.000 0.00 0.00 0.00 1.47
257 258 5.790096 TCCATGAACAATATCCAGCCCTATA 59.210 40.000 0.00 0.00 0.00 1.31
258 259 4.603171 TCCATGAACAATATCCAGCCCTAT 59.397 41.667 0.00 0.00 0.00 2.57
259 260 3.980022 TCCATGAACAATATCCAGCCCTA 59.020 43.478 0.00 0.00 0.00 3.53
260 261 2.785269 TCCATGAACAATATCCAGCCCT 59.215 45.455 0.00 0.00 0.00 5.19
261 262 3.152341 CTCCATGAACAATATCCAGCCC 58.848 50.000 0.00 0.00 0.00 5.19
262 263 3.567164 CACTCCATGAACAATATCCAGCC 59.433 47.826 0.00 0.00 0.00 4.85
263 264 4.202441 ACACTCCATGAACAATATCCAGC 58.798 43.478 0.00 0.00 0.00 4.85
264 265 5.468072 GCTACACTCCATGAACAATATCCAG 59.532 44.000 0.00 0.00 0.00 3.86
265 266 5.104569 TGCTACACTCCATGAACAATATCCA 60.105 40.000 0.00 0.00 0.00 3.41
266 267 5.368145 TGCTACACTCCATGAACAATATCC 58.632 41.667 0.00 0.00 0.00 2.59
267 268 7.502120 AATGCTACACTCCATGAACAATATC 57.498 36.000 0.00 0.00 0.00 1.63
268 269 7.445402 GGTAATGCTACACTCCATGAACAATAT 59.555 37.037 0.00 0.00 0.00 1.28
269 270 6.765989 GGTAATGCTACACTCCATGAACAATA 59.234 38.462 0.00 0.00 0.00 1.90
270 271 5.590259 GGTAATGCTACACTCCATGAACAAT 59.410 40.000 0.00 0.00 0.00 2.71
271 272 4.941263 GGTAATGCTACACTCCATGAACAA 59.059 41.667 0.00 0.00 0.00 2.83
272 273 4.225042 AGGTAATGCTACACTCCATGAACA 59.775 41.667 0.00 0.00 0.00 3.18
273 274 4.770795 AGGTAATGCTACACTCCATGAAC 58.229 43.478 0.00 0.00 0.00 3.18
274 275 5.185454 CAAGGTAATGCTACACTCCATGAA 58.815 41.667 0.00 0.00 0.00 2.57
275 276 4.225042 ACAAGGTAATGCTACACTCCATGA 59.775 41.667 0.00 0.00 0.00 3.07
276 277 4.517285 ACAAGGTAATGCTACACTCCATG 58.483 43.478 0.00 0.00 0.00 3.66
277 278 4.225042 TGACAAGGTAATGCTACACTCCAT 59.775 41.667 0.00 0.00 0.00 3.41
278 279 3.580895 TGACAAGGTAATGCTACACTCCA 59.419 43.478 0.00 0.00 0.00 3.86
279 280 3.933332 GTGACAAGGTAATGCTACACTCC 59.067 47.826 0.00 0.00 0.00 3.85
280 281 4.822026 AGTGACAAGGTAATGCTACACTC 58.178 43.478 0.00 0.00 31.73 3.51
281 282 4.891992 AGTGACAAGGTAATGCTACACT 57.108 40.909 0.00 0.00 32.13 3.55
282 283 6.258068 GGATAAGTGACAAGGTAATGCTACAC 59.742 42.308 0.00 0.00 0.00 2.90
283 284 6.156256 AGGATAAGTGACAAGGTAATGCTACA 59.844 38.462 0.00 0.00 0.00 2.74
284 285 6.583562 AGGATAAGTGACAAGGTAATGCTAC 58.416 40.000 0.00 0.00 0.00 3.58
285 286 6.183360 GGAGGATAAGTGACAAGGTAATGCTA 60.183 42.308 0.00 0.00 0.00 3.49
286 287 5.396884 GGAGGATAAGTGACAAGGTAATGCT 60.397 44.000 0.00 0.00 0.00 3.79
287 288 4.816925 GGAGGATAAGTGACAAGGTAATGC 59.183 45.833 0.00 0.00 0.00 3.56
288 289 5.989477 TGGAGGATAAGTGACAAGGTAATG 58.011 41.667 0.00 0.00 0.00 1.90
289 290 6.443849 TCTTGGAGGATAAGTGACAAGGTAAT 59.556 38.462 0.00 0.00 36.78 1.89
290 291 5.783360 TCTTGGAGGATAAGTGACAAGGTAA 59.217 40.000 0.00 0.00 36.78 2.85
291 292 5.338632 TCTTGGAGGATAAGTGACAAGGTA 58.661 41.667 0.00 0.00 36.78 3.08
292 293 4.168101 TCTTGGAGGATAAGTGACAAGGT 58.832 43.478 0.00 0.00 36.78 3.50
293 294 4.826274 TCTTGGAGGATAAGTGACAAGG 57.174 45.455 0.00 0.00 36.78 3.61
294 295 6.648192 AGATTCTTGGAGGATAAGTGACAAG 58.352 40.000 0.00 0.00 37.31 3.16
295 296 6.627087 AGATTCTTGGAGGATAAGTGACAA 57.373 37.500 0.00 0.00 0.00 3.18
296 297 7.733773 TTAGATTCTTGGAGGATAAGTGACA 57.266 36.000 0.00 0.00 0.00 3.58
297 298 9.620259 AAATTAGATTCTTGGAGGATAAGTGAC 57.380 33.333 0.00 0.00 0.00 3.67
298 299 9.838339 GAAATTAGATTCTTGGAGGATAAGTGA 57.162 33.333 0.00 0.00 0.00 3.41
299 300 9.844257 AGAAATTAGATTCTTGGAGGATAAGTG 57.156 33.333 0.00 0.00 36.23 3.16
300 301 9.844257 CAGAAATTAGATTCTTGGAGGATAAGT 57.156 33.333 0.00 0.00 37.56 2.24
303 304 8.153550 GCTCAGAAATTAGATTCTTGGAGGATA 58.846 37.037 0.00 0.00 37.56 2.59
304 305 6.997476 GCTCAGAAATTAGATTCTTGGAGGAT 59.003 38.462 0.00 0.00 37.56 3.24
305 306 6.352516 GCTCAGAAATTAGATTCTTGGAGGA 58.647 40.000 0.00 0.00 37.56 3.71
306 307 5.530543 GGCTCAGAAATTAGATTCTTGGAGG 59.469 44.000 0.00 0.00 37.56 4.30
307 308 6.118170 TGGCTCAGAAATTAGATTCTTGGAG 58.882 40.000 0.00 0.00 37.56 3.86
308 309 6.065976 TGGCTCAGAAATTAGATTCTTGGA 57.934 37.500 0.00 0.00 37.56 3.53
309 310 6.016443 GGATGGCTCAGAAATTAGATTCTTGG 60.016 42.308 0.00 0.00 37.56 3.61
310 311 6.771749 AGGATGGCTCAGAAATTAGATTCTTG 59.228 38.462 0.00 0.00 37.56 3.02
311 312 6.909076 AGGATGGCTCAGAAATTAGATTCTT 58.091 36.000 0.00 0.00 37.56 2.52
312 313 6.512514 AGGATGGCTCAGAAATTAGATTCT 57.487 37.500 0.00 0.00 40.23 2.40
313 314 8.682936 TTAAGGATGGCTCAGAAATTAGATTC 57.317 34.615 0.00 0.00 0.00 2.52
314 315 9.075678 CATTAAGGATGGCTCAGAAATTAGATT 57.924 33.333 0.00 0.00 31.83 2.40
315 316 8.443176 TCATTAAGGATGGCTCAGAAATTAGAT 58.557 33.333 0.00 0.00 36.37 1.98
316 317 7.805163 TCATTAAGGATGGCTCAGAAATTAGA 58.195 34.615 0.00 0.00 36.37 2.10
317 318 8.455903 TTCATTAAGGATGGCTCAGAAATTAG 57.544 34.615 0.00 0.00 36.37 1.73
318 319 8.274322 TCTTCATTAAGGATGGCTCAGAAATTA 58.726 33.333 3.54 0.00 36.37 1.40
319 320 7.121382 TCTTCATTAAGGATGGCTCAGAAATT 58.879 34.615 3.54 0.00 36.37 1.82
320 321 6.666678 TCTTCATTAAGGATGGCTCAGAAAT 58.333 36.000 3.54 0.00 36.37 2.17
321 322 6.065976 TCTTCATTAAGGATGGCTCAGAAA 57.934 37.500 3.54 0.00 36.37 2.52
322 323 5.698741 TCTTCATTAAGGATGGCTCAGAA 57.301 39.130 3.54 0.00 36.37 3.02
323 324 5.397221 CCTTCTTCATTAAGGATGGCTCAGA 60.397 44.000 3.54 0.00 45.41 3.27
324 325 4.820716 CCTTCTTCATTAAGGATGGCTCAG 59.179 45.833 3.54 0.00 45.41 3.35
325 326 4.474651 TCCTTCTTCATTAAGGATGGCTCA 59.525 41.667 0.43 0.00 45.97 4.26
326 327 5.041191 TCCTTCTTCATTAAGGATGGCTC 57.959 43.478 0.43 0.00 45.97 4.70
333 334 5.237344 CGCTATGGTTCCTTCTTCATTAAGG 59.763 44.000 0.00 0.00 44.17 2.69
334 335 5.237344 CCGCTATGGTTCCTTCTTCATTAAG 59.763 44.000 0.00 0.00 0.00 1.85
335 336 5.104693 TCCGCTATGGTTCCTTCTTCATTAA 60.105 40.000 0.00 0.00 39.52 1.40
336 337 4.407621 TCCGCTATGGTTCCTTCTTCATTA 59.592 41.667 0.00 0.00 39.52 1.90
337 338 3.199946 TCCGCTATGGTTCCTTCTTCATT 59.800 43.478 0.00 0.00 39.52 2.57
338 339 2.771943 TCCGCTATGGTTCCTTCTTCAT 59.228 45.455 0.00 0.00 39.52 2.57
339 340 2.184533 TCCGCTATGGTTCCTTCTTCA 58.815 47.619 0.00 0.00 39.52 3.02
340 341 2.981859 TCCGCTATGGTTCCTTCTTC 57.018 50.000 0.00 0.00 39.52 2.87
341 342 2.838202 TCTTCCGCTATGGTTCCTTCTT 59.162 45.455 0.00 0.00 39.52 2.52
342 343 2.467880 TCTTCCGCTATGGTTCCTTCT 58.532 47.619 0.00 0.00 39.52 2.85
343 344 2.981859 TCTTCCGCTATGGTTCCTTC 57.018 50.000 0.00 0.00 39.52 3.46
344 345 3.713826 TTTCTTCCGCTATGGTTCCTT 57.286 42.857 0.00 0.00 39.52 3.36
345 346 3.933861 ATTTCTTCCGCTATGGTTCCT 57.066 42.857 0.00 0.00 39.52 3.36
346 347 6.486993 AGAAATATTTCTTCCGCTATGGTTCC 59.513 38.462 22.43 0.00 44.70 3.62
347 348 7.497925 AGAAATATTTCTTCCGCTATGGTTC 57.502 36.000 22.43 0.00 44.70 3.62
361 362 7.992180 ACAAATGGCATCGAAGAAATATTTC 57.008 32.000 18.70 18.70 43.58 2.17
362 363 7.818930 ACAACAAATGGCATCGAAGAAATATTT 59.181 29.630 0.00 0.00 43.58 1.40
363 364 7.276218 CACAACAAATGGCATCGAAGAAATATT 59.724 33.333 0.00 0.00 43.58 1.28
364 365 6.753279 CACAACAAATGGCATCGAAGAAATAT 59.247 34.615 0.00 0.00 43.58 1.28
365 366 6.092092 CACAACAAATGGCATCGAAGAAATA 58.908 36.000 0.00 0.00 43.58 1.40
366 367 4.925054 CACAACAAATGGCATCGAAGAAAT 59.075 37.500 0.00 0.00 43.58 2.17
367 368 4.202101 ACACAACAAATGGCATCGAAGAAA 60.202 37.500 0.00 0.00 43.58 2.52
368 369 3.317711 ACACAACAAATGGCATCGAAGAA 59.682 39.130 0.00 0.00 43.58 2.52
369 370 2.884012 ACACAACAAATGGCATCGAAGA 59.116 40.909 0.00 0.00 45.75 2.87
370 371 2.981805 CACACAACAAATGGCATCGAAG 59.018 45.455 0.00 0.00 0.00 3.79
371 372 2.620585 TCACACAACAAATGGCATCGAA 59.379 40.909 0.00 0.00 0.00 3.71
372 373 2.225467 TCACACAACAAATGGCATCGA 58.775 42.857 0.00 0.00 0.00 3.59
373 374 2.702898 TCACACAACAAATGGCATCG 57.297 45.000 0.00 0.00 0.00 3.84
374 375 5.521010 CCATATTCACACAACAAATGGCATC 59.479 40.000 0.00 0.00 0.00 3.91
375 376 5.046448 ACCATATTCACACAACAAATGGCAT 60.046 36.000 0.00 0.00 36.66 4.40
376 377 4.282957 ACCATATTCACACAACAAATGGCA 59.717 37.500 0.00 0.00 36.66 4.92
377 378 4.626604 CACCATATTCACACAACAAATGGC 59.373 41.667 0.00 0.00 36.66 4.40
378 379 6.023357 TCACCATATTCACACAACAAATGG 57.977 37.500 0.00 0.00 38.66 3.16
379 380 7.412129 GCAATCACCATATTCACACAACAAATG 60.412 37.037 0.00 0.00 0.00 2.32
414 415 8.721019 TCAAAGCTCACTTTCATTTCATTTTT 57.279 26.923 0.00 0.00 44.41 1.94
418 419 6.927381 CCTTTCAAAGCTCACTTTCATTTCAT 59.073 34.615 0.00 0.00 44.41 2.57
422 423 6.661304 ATCCTTTCAAAGCTCACTTTCATT 57.339 33.333 0.00 0.00 44.41 2.57
432 433 6.516693 CGGAAAACCTTTATCCTTTCAAAGCT 60.517 38.462 0.00 0.00 31.69 3.74
455 456 5.934935 ACACTTTTATGTAGTTCAACCGG 57.065 39.130 0.00 0.00 0.00 5.28
485 487 8.686334 GGTGAAAATCTATCCTATGCTCAAAAA 58.314 33.333 0.00 0.00 0.00 1.94
486 488 7.285401 GGGTGAAAATCTATCCTATGCTCAAAA 59.715 37.037 0.00 0.00 0.00 2.44
487 489 6.772716 GGGTGAAAATCTATCCTATGCTCAAA 59.227 38.462 0.00 0.00 0.00 2.69
488 490 6.299141 GGGTGAAAATCTATCCTATGCTCAA 58.701 40.000 0.00 0.00 0.00 3.02
490 492 5.249420 GGGGTGAAAATCTATCCTATGCTC 58.751 45.833 0.00 0.00 0.00 4.26
491 493 4.043435 GGGGGTGAAAATCTATCCTATGCT 59.957 45.833 0.00 0.00 0.00 3.79
492 494 4.202567 TGGGGGTGAAAATCTATCCTATGC 60.203 45.833 0.00 0.00 0.00 3.14
493 495 5.582950 TGGGGGTGAAAATCTATCCTATG 57.417 43.478 0.00 0.00 0.00 2.23
494 496 6.606241 TTTGGGGGTGAAAATCTATCCTAT 57.394 37.500 0.00 0.00 0.00 2.57
502 504 5.545063 TCTTCTTTTTGGGGGTGAAAATC 57.455 39.130 0.00 0.00 0.00 2.17
532 534 6.559157 CCCCCTAGATTTATCCTTAAGAGTGT 59.441 42.308 3.36 0.00 0.00 3.55
533 535 6.520913 GCCCCCTAGATTTATCCTTAAGAGTG 60.521 46.154 3.36 0.00 0.00 3.51
534 536 5.548446 GCCCCCTAGATTTATCCTTAAGAGT 59.452 44.000 3.36 0.00 0.00 3.24
544 546 2.775384 TCACGTTGCCCCCTAGATTTAT 59.225 45.455 0.00 0.00 0.00 1.40
550 552 0.036306 AAGTTCACGTTGCCCCCTAG 59.964 55.000 0.00 0.00 0.00 3.02
556 558 1.515521 CCAGGGAAGTTCACGTTGCC 61.516 60.000 5.01 0.00 35.69 4.52
565 567 2.381445 CTCTGGCTCCAGGGAAGTT 58.619 57.895 10.25 0.00 47.00 2.66
572 574 3.533547 CATCTCTTTTCTCTGGCTCCAG 58.466 50.000 9.61 9.61 44.86 3.86
763 779 1.006571 GGAGCGTCGTGGAGAACAA 60.007 57.895 0.00 0.00 0.00 2.83
764 780 1.740332 TTGGAGCGTCGTGGAGAACA 61.740 55.000 0.00 0.00 0.00 3.18
765 781 1.006571 TTGGAGCGTCGTGGAGAAC 60.007 57.895 0.00 0.00 0.00 3.01
793 836 1.076438 TCTCCTGACTCCTCACTGGA 58.924 55.000 0.00 0.00 43.86 3.86
861 921 5.447757 AGTACTTTATAGAGAGGTTCGGCT 58.552 41.667 0.00 0.00 0.00 5.52
868 928 6.260493 ACTGCACGTAGTACTTTATAGAGAGG 59.740 42.308 0.00 0.00 41.61 3.69
881 941 1.320507 TGTGTCCACTGCACGTAGTA 58.679 50.000 0.00 0.00 41.61 1.82
883 943 1.526887 CTTTGTGTCCACTGCACGTAG 59.473 52.381 0.00 0.00 39.53 3.51
992 1058 1.339151 ACAGGTTCGCCATCTTTCTCC 60.339 52.381 0.00 0.00 40.60 3.71
1143 1209 3.462678 GGGAGGCTCACCGAGACC 61.463 72.222 17.69 2.17 38.74 3.85
1155 1221 2.692741 GGGACTTGGGGAGGGAGG 60.693 72.222 0.00 0.00 0.00 4.30
1210 1319 2.159043 TCGCTATGGAGAAAGCAAGGAG 60.159 50.000 0.00 0.00 38.70 3.69
1213 1322 2.031437 GCTTCGCTATGGAGAAAGCAAG 59.969 50.000 10.25 0.00 40.27 4.01
1243 1352 7.712639 GCTCCATGACAAGTCAAAATCTCTATA 59.287 37.037 7.02 0.00 43.58 1.31
1247 1372 4.699257 AGCTCCATGACAAGTCAAAATCTC 59.301 41.667 7.02 0.00 43.58 2.75
1268 1393 2.363683 AGATTCAAAGGCAGCTACAGC 58.636 47.619 0.00 0.00 42.49 4.40
1269 1394 5.382618 AAAAGATTCAAAGGCAGCTACAG 57.617 39.130 0.00 0.00 0.00 2.74
1270 1395 5.106712 CGTAAAAGATTCAAAGGCAGCTACA 60.107 40.000 0.00 0.00 0.00 2.74
1271 1396 5.324697 CGTAAAAGATTCAAAGGCAGCTAC 58.675 41.667 0.00 0.00 0.00 3.58
1272 1397 4.394920 CCGTAAAAGATTCAAAGGCAGCTA 59.605 41.667 0.00 0.00 0.00 3.32
1273 1398 3.191371 CCGTAAAAGATTCAAAGGCAGCT 59.809 43.478 0.00 0.00 0.00 4.24
1274 1399 3.190535 TCCGTAAAAGATTCAAAGGCAGC 59.809 43.478 0.00 0.00 0.00 5.25
1275 1400 4.455877 AGTCCGTAAAAGATTCAAAGGCAG 59.544 41.667 0.00 0.00 0.00 4.85
1276 1401 4.394729 AGTCCGTAAAAGATTCAAAGGCA 58.605 39.130 0.00 0.00 0.00 4.75
1277 1402 5.642491 ACTAGTCCGTAAAAGATTCAAAGGC 59.358 40.000 0.00 0.00 0.00 4.35
1278 1403 7.097834 AGACTAGTCCGTAAAAGATTCAAAGG 58.902 38.462 19.38 0.00 0.00 3.11
1291 1416 2.502142 TTGCTGGAGACTAGTCCGTA 57.498 50.000 19.38 4.95 39.81 4.02
1293 1418 2.969628 AATTGCTGGAGACTAGTCCG 57.030 50.000 19.38 6.95 39.81 4.79
1294 1419 5.086104 TGTAAATTGCTGGAGACTAGTCC 57.914 43.478 19.38 10.62 37.10 3.85
1308 1433 9.970395 AGGCACATATATGTTGATTGTAAATTG 57.030 29.630 15.85 1.67 39.39 2.32
1321 1446 5.767665 TCGGCATAAAAAGGCACATATATGT 59.232 36.000 12.75 12.75 42.84 2.29
1372 1497 0.807667 GATCGAGTGGCTGCAACGAT 60.808 55.000 16.98 16.98 44.35 3.73
1373 1498 1.446099 GATCGAGTGGCTGCAACGA 60.446 57.895 0.67 6.82 37.39 3.85
1374 1499 1.690283 CTGATCGAGTGGCTGCAACG 61.690 60.000 0.67 1.42 0.00 4.10
1375 1500 1.975363 GCTGATCGAGTGGCTGCAAC 61.975 60.000 0.00 0.00 0.00 4.17
1376 1501 1.742880 GCTGATCGAGTGGCTGCAA 60.743 57.895 0.50 0.00 0.00 4.08
1377 1502 2.125391 GCTGATCGAGTGGCTGCA 60.125 61.111 0.50 0.00 0.00 4.41
1379 1504 0.879400 GGATGCTGATCGAGTGGCTG 60.879 60.000 0.00 0.00 0.00 4.85
1380 1505 1.445095 GGATGCTGATCGAGTGGCT 59.555 57.895 0.00 0.00 0.00 4.75
1381 1506 1.596477 GGGATGCTGATCGAGTGGC 60.596 63.158 0.00 0.00 0.00 5.01
1423 1558 7.002879 TGGTTGGAGGTAGTGAGATATAGTAC 58.997 42.308 0.00 0.00 0.00 2.73
1427 1562 7.789831 AGAAATGGTTGGAGGTAGTGAGATATA 59.210 37.037 0.00 0.00 0.00 0.86
1428 1563 6.617371 AGAAATGGTTGGAGGTAGTGAGATAT 59.383 38.462 0.00 0.00 0.00 1.63
1485 1622 8.293867 GCTGTACTACAAAGTCTATCTATCTGG 58.706 40.741 0.00 0.00 37.15 3.86
1487 1624 8.982091 TGCTGTACTACAAAGTCTATCTATCT 57.018 34.615 0.00 0.00 37.15 1.98
1490 1627 9.803315 CAATTGCTGTACTACAAAGTCTATCTA 57.197 33.333 5.43 0.00 37.15 1.98
1496 1633 6.787085 AGTCAATTGCTGTACTACAAAGTC 57.213 37.500 0.00 1.46 37.15 3.01
1504 1641 4.067896 CAGGACAAGTCAATTGCTGTACT 58.932 43.478 11.87 11.87 43.15 2.73
1514 1651 1.270305 CGAGAAGCCAGGACAAGTCAA 60.270 52.381 2.29 0.00 0.00 3.18
1528 1665 2.356313 AGCCACACGCACGAGAAG 60.356 61.111 0.00 0.00 41.38 2.85
1529 1666 2.661537 CAGCCACACGCACGAGAA 60.662 61.111 0.00 0.00 41.38 2.87
1537 1674 4.029186 ATGCGTTGCAGCCACACG 62.029 61.111 3.54 3.54 43.65 4.49
1706 1843 3.969802 GGTGACCACGTCGACGGT 61.970 66.667 37.89 27.87 44.95 4.83
1894 2031 1.895020 CGACCATCTTCCGGTTGGGA 61.895 60.000 16.11 5.88 45.40 4.37
1934 2071 1.683365 CGGGGTCGAAGGGGAAGTA 60.683 63.158 0.00 0.00 39.00 2.24
1972 2109 2.291043 GGAGAACTCGAAGGGGCCA 61.291 63.158 4.39 0.00 0.00 5.36
2132 2269 0.038159 GTCACCGTCTTGACCTCCTG 60.038 60.000 0.00 0.00 40.15 3.86
2151 2288 0.753262 CCTGAGGAAGATGGGGTACG 59.247 60.000 0.00 0.00 0.00 3.67
2198 2335 1.154197 CATCATGCCGCATCTGTAGG 58.846 55.000 1.86 0.00 0.00 3.18
2200 2337 2.419667 CATCATCATGCCGCATCTGTA 58.580 47.619 1.86 0.00 0.00 2.74
2239 2379 1.070577 CGTGAAGACTTGAAAGCGTGG 60.071 52.381 0.00 0.00 0.00 4.94
2240 2380 1.593006 ACGTGAAGACTTGAAAGCGTG 59.407 47.619 0.00 0.00 0.00 5.34
2250 2390 1.674441 TCACTTCGTCACGTGAAGACT 59.326 47.619 29.77 17.04 44.42 3.24
2255 2395 2.607038 CCATCTTCACTTCGTCACGTGA 60.607 50.000 15.76 15.76 38.30 4.35
2344 2488 3.500680 GCCAAAAATCACTTCGTCCTGTA 59.499 43.478 0.00 0.00 0.00 2.74
2372 2516 4.422592 TGAATAGGAGGGGATGGTAGTAGT 59.577 45.833 0.00 0.00 0.00 2.73
2380 2524 6.392911 TTGGAATATGAATAGGAGGGGATG 57.607 41.667 0.00 0.00 0.00 3.51
2395 2540 6.751514 TGTTACACGCTGAATTTGGAATAT 57.248 33.333 0.00 0.00 0.00 1.28
2467 2619 3.703001 AGACCAAGGTAACATCCACAG 57.297 47.619 0.00 0.00 41.41 3.66
2540 2697 7.639113 AAAATCGACTGGCCTTAATTCAATA 57.361 32.000 3.32 0.00 0.00 1.90
2550 2707 2.224523 TGTCAGAAAAATCGACTGGCCT 60.225 45.455 3.32 0.00 35.72 5.19
2553 2710 4.511454 TCAACTGTCAGAAAAATCGACTGG 59.489 41.667 6.91 0.00 34.13 4.00
2571 2728 3.442977 GGATCTTGAAGCAGCAATCAACT 59.557 43.478 9.03 1.73 32.46 3.16
2668 2829 1.808945 CAGCCTGCTAAGGTTTGACTG 59.191 52.381 0.00 0.00 46.43 3.51
2832 3023 2.871453 ACACCCAACCAACATCCTAAC 58.129 47.619 0.00 0.00 0.00 2.34
2912 3265 8.016497 TGCACTTTTCATAATATGCAAACAAC 57.984 30.769 0.00 0.00 39.94 3.32
2928 3281 9.083080 ACAACTTTACACTAATTTGCACTTTTC 57.917 29.630 0.00 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.