>input_sequence_57990
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-------------------------ATGGCGAACCTGTTCCTGAAGCAGGCGAAGCACTACGCGGCGGCGCGGCCCGACT
ACCCGGCGGAGCTCTTCCAGTTCATCGCGTCCAAGACGGCGCGCCACGACCTCGCGTGGGACGTCGGCACCGGCAGCGGC
CAGGCCGCGGTCTCGGTGAGCCTCCCTCCCCAAGT-------------------------------------CCCACCTC
TCTCCATCCCTGCCG------TCCATGAGTTTCTCTTCCTCCTTGCTTTCTCCATAGCGAAGCCACGGTAGTA-------
---------TAGAGATTTTGACTTGTCATGGAGCTGTAGCTGCCTTTGAATCTTTTACGGACTAGTCTCCAGCAATTTAC
AATCAACATATATGTGCCTTTTTATGCCGACGTTCCTTTCCATGGACCCATGCTGAATCGTTGCAG---------CCACT
CGATCAGCATCCCCTTTTTAGCTAGCTAGT-GGAATCGTACTATATCTCACTACCTCCAACCA--TTTCTTGCATTCAAC
ATCAGCAATTTCTAGTGGAATCCAGATAGATAGACTTTGTAGTACAGCAATTGACTTGTCCTGGCTTCTCGTGCGTGTGG
CTGCAACGCATGCAGCTGGCGAAGCTGTACAAGAAGGTGGTGGGCACGGACACGAGCGCGCAGCAGCTGGCCTACGCGCG
GGCGCTCCCCAACGTGCGCTACGCCCACACCCCGGCGGACCTGCCGCTCGAGGGCATCCACGCGGCCGTCGCGCCGCCGG
GCACCGTCGACGTGGTCACCGTGGCGCAGGCCTTCCACTGGCTCGACCTGCCGCGCTTCTACGCGCAGACCCGCTCCCTC
CTGCGCGCGCACGGCGTCCTCGCCGCATGGTGCTACACGGAGCCCCGCGTGGGCGCCGCCGTCGACGCCGTCTTCTGGCG
CCTCTACGACGGCTCCCAGCCCCACTGGGCTCCCAACCGGAAGATGGTCGACGACGAGTACCGCAGCGCCTACTTCCCCT
TCGACCCCGTCGACGGCGAGACCCACACTGGCCCCTTCGAGTTCTCCACCGAGCGCCGCATGGACCTCGACGACTACTTC
ACCTACATCAAGTCCTGGTCCGCGTACCAGACCGCCAAGGACAATGGCGTCGAGCTGCTCGACGACGAGACTGTGCGGGA
GTTCGCCGACGCGTGGGGCGGCGACCGCCAGGAGGTCAAGACGGTGACGTACCCCATCTTCCTCAGGATCGGCAAGGTGA
GGCCTTGA------------------------------------------------------------------------
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------------------------------
>chr2B_1_TraesCS2B01G062500
TCTTCTTATTAATATCAACCGACACGGTAGACTGGATCAAAGCTCTATACATAGAATCCACTGAGAATTTCCCATTCCCA
TGTAGGTTCCAACGAAATACATCGGACCCTTGTGACAAATGTACCGTGGCTAGCCGCTGGAGTAGTATGTTCCATGATTA
GAGTCTAGGTCCAATTAAATCCCTTCTGAACATCACATTTGGCGGAAATGATTCCAAAACCTTGGCGATAGCATCACCCT
TGTGAAGCACAATATTGTATAGGGCTGGATATTGTTCATGGAGTGTAGCATTACCTTGTCACTTATCCTCCAAGAATCTA
ATTTCTGAGCCATCCTTAATGAAGAAGGAACCATAGCGGAAGAAATATTTCTTCGATGCCATTTGTTGTGTGAATATGGT
GATTGCTTTATCTAAAAAATGAAATGAAAGTGAGCTTTGAAAGGATAAAGGTTTTCCGGTTGAACTACATAAAAG-TGTA
GAGTTTTTTTTGAGCATAGGATAGATTTTCACCCCCAAAAAGAAGAAAAAAAAACACTCTTAAGGATAAATCTAGGGGGC
AACGTGAACTTCCCTGGAGCCAGAGAAAAGAGATGCAGTGGCGGCGCGGATGGGATTCGGTGAGAGATCGCAAGAGTTTG
CC-------------TGGGCTGCAATGCAACGAGTGGGAGGAAAAAGACTCGC-CCAGGGCGGGGCGTATCTGAGGACAA
ACCAAGAGGAAGTTTGCACGAACTTTCCTGTGGCAACACAAGACACGTGCGAGCGAACTTG-------------------
--------TTCTCCACGACGCTCCAACCAACCGGATCCAGTGAGGAGT-----------------CAGGAGATAGCTTGG
GAAGAAAGCATGGCACGTATTTGCCAAGAAAGCACGTCCAAGCCGAACCTCTCTATAAAGTACTACGTGCAGTGGACACA
AAGTATCATC--ATCATAGAAAAATAAGCATCCATCTCCTCCCTTCAGCCCACAGGCAACGAACACACACGAGCG--CGC
AC--GAGCGAGCGAGAGGGAGAAAGATGGCGAACCTGTTCCTGAAGCAGGCGAAGCACTACGCGGCGGCGCGGCCCGACT
ACCCGGCGGAGCTCTTCCAGTTCATCGCGTCCAAGACGGCGCGCCACGACCTCGCGTGGGACGTCGGCACCGGCAGCGGC
CAGGCCGCGGTCTCGGTGAGCCTCCCTCCCCAAGT-------------------------------------CCCACCTC
TCTCCATCCCTGCCG------TCCATGAGTTTCTCTTCCTCCTTGCTTTCTCCATAGCGAAGCCACGGTAGTA-------
---------TAGAGATTTTGACTTGTCATGGAGCTGTAGCTGCCTTTGAATCTTTTACGGACTAGTCTCCAGCAATTTAC
AATCAACATATATGTGCCTTTTTATGCCGACGTTCCTTTCCATGGACCCATGCTGAATCGTTGCAG---------CCACT
CGATCAGCATCCCCTTTTTAGCTAGCTAGT-GGAATCGTACTATATCTCACTACCTCCAACCA--TTTCTTGCATTCAAC
ATCAGCAATTTCTAGTGGAATCCAGATAGATAGACTTTGTAGTACAGCAATTGACTTGTCCTGGCTTCTCGTGCGTGTGG
CTGCAACGCATGCAGCTGGCGAAGCTGTACAAGAAGGTGGTGGGCACGGACACGAGCGCGCAGCAGCTGGCCTACGCGCG
GGCGCTCCCCAACGTGCGCTACGCCCACACCCCGGCGGACCTGCCGCTCGAGGGCATCCACGCGGCCGTCGCGCCGCCGG
GCACCGTCGACGTGGTCACCGTGGCGCAGGCCTTCCACTGGCTCGACCTGCCGCGCTTCTACGCGCAGACCCGCTCCCTC
CTGCGCGCGCACGGCGTCCTCGCCGCATGGTGCTACACGGAGCCCCGCGTGGGCGCCGCCGTCGACGCCGTCTTCTGGCG
CCTCTACGACGGCTCCCAGCCCCACTGGGCTCCCAACCGGAAGATGGTCGACGACGAGTACCGCAGCGCCTACTTCCCCT
TCGACCCCGTCGACGGCGAGACCCACACTGGCCCCTTCGAGTTCTCCACCGAGCGCCGCATGGACCTCGACGACTACTTC
ACCTACATCAAGTCCTGGTCCGCGTACCAGACCGCCAAGGACAATGGCGTCGAGCTGCTCGACGACGAGACTGTGCGGGA
GTTCGCCGACGCGTGGGGCGGCGACCGCCAGGAGGTCAAGACGGTGACGTACCCCATCTTCCTCAGGATCGGCAAGGTGA
GGCCTTGAGAATCACCTACAGATGCGGCATGATG--ATGCAAGTGGCCTTGAGAAA-GCCACGCTTTCAAGTCTTCACGT
GA----CGAAGTGAAGATGGTGCAAAATGCCGACCAGCGTACGTGTGCCGCCGCTGGACCATTTTATTTGCATTCCACGC
TCTTTTTTACAGGACGAAGTGATTTTTGGCATCCTACTACTACCATCCCC-TCCTATTCATATTCCAAATTCAGCGTGTA
ACAAATGG-------TATTCCTAGTATCCATCCCATTTTCTAGACAAATAATTGTAAGCTGTGGATGTTACCTTGGTCTA
TCGTAT-----ATGAATGTTATTTTTGCCAGTTTAGCTATATGTAAGTTGCCTGAATATTGAATTAAGGCCAGTCGATTT
TTCTGACAGTTGATTGCTGCTTCAAGATCCGCGCTTCTGATTTTTT---TTCTGTTGTGTGTTGTGTCTGATTT-GGGCT
GGGAATTCAACTGACCAGTGTTTTGGGCCAGTCAAACCTTAGCAGGCTGAAGCCCATCAGCCCGTATGACGACCCAGCCT
TCCTCTATCTTCTTCTGTTTTTGTCTATCTTTTTTT--T-CTGTT----TTTA----------TTTG------------T
TTTTTACTTTTCTTTTTTCTTTTTTTATTAGTCGGTTTTAGAATT-TTATTTTGTGGGTATTGTTAGGATGTTGGTTGGG
TGTAAATGTATGTACATAAATACTA-------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TATATAATATGTGCAAAAACTGCACTAGTATATAATTGTTGTTTGCATATTAT
GAAAAGTGCAAA-TTAGTGT-AAAGTTGTGTGTAAGTTTTTCTTAATTTTCTTTCCTCTCAAAGGGTAATAACAATGCAA
CTAATTAATTCTTTCTTATAAAAATTTATTGTTTTGATTTTATTCTAGTTTTTA-TTTTAT-TTTCTTTCTTCTTTATGG
GTAACACCAATGCCACTAATTCATTGCTTCTTAGAAAACTT-TTGTTT-GCCATAATTGCACTATTGTATGCTTATTCTT
GCATATTTTCAATATGCGCAATTTTAGTGT
>chr2D_381
--------------------------------------------------------------------------------
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------------------------------------------------------------ATTTGTTGTGTGAATATGGT
GGTTGCTTTAATTATAAAGTGAGATGAAAGTGTGCTTTGAAAGGATAAAGGTTTTGCGGTTGAACTACATAAAAG-TTTG
AGTTGTGAACTC----TAGGATAAATTTTCACCCCCAAAAAGAAAAAGAAAAA---CTCTTAAGGGTAAATTTAGGGAGC
AACGTGGACTTCCGTAGAGGCATAGAAAAG-GATGCAGCGGCGGCGCGGATGGGATTCGGTGAGAGATCGCAAGAGCTTG
CAAGAGTGGAAGGGATGGGATGCAATGCAACGAGTGGGAGGGAAAAAGACTGGGCCAGGGCGGGGCGTATCTGAGGACAA
ACCAAGAGGAAGTTTGCACGAACTTTCCTGTGGCTACACAAGACACGTGCGAGCA---------------------AACT
TGTCCTATTTCTCCACGACGCTCCAACCAACCGGACCCTGTGAGGAGTGAGGAGGAACAATTCAACAGGAGATAGCTTGG
GAAGAAAGCATGGCACGTATTTGCCAAGAAAGCACGTCCGCACCGAAGCTCTCTATAAAG---TACGTGCAGTGCACAGA
AAGTATCATCATATCATAGAAAATTAAGCATCCATCTCCTCGGTTCAGCCCACAGGCAACGAACGCACACGAGCGTGCGC
AC--GAGCGAGCGAGAGAGATAAAGATGGCGAACCTGTTCCTGAAGCAGGCGAAGCACTACGCGGCGGCGCGGCCGGACT
ACCCGGCGGAGCTCTTCCAGTTCATCGCGTCCAAGACGGCGCGCCATGACCTCGCGTGGGACGTCGGCACCGGCAGCGGC
CAGGCCGCAGTCTCGGTGAGTCTCCCTCCCCAAGC-------------------------------------CCCACCTC
TCTCCATCCCTGCCGCTGCCGTCCATGAATTTGTCTTCATCTTTGCGTTCTCCATAGCAAAGCCACGGTAGAAAAGCATT
TTTTTAGTGTATAGATTTTGACT--------------------CTTTGAATCTTTGATTGACTAGTCTCCAGAAATTTAC
AATCACCATATATGTGCCTTTTTATGCCGACGTCCCTTTCCATTGACCCATGCTGAGCTTCCGGGTTCGTTTCGACCACT
CGATCAGCATCCACTTTTTAGCTAGCTGTT-GGAATCTTAC--TATCTCACTACCTCCAACCA--TTTCTTGCATTCAAC
ATCAGCAATTTCTAGTGGAATTC----AGATACACTTTGTTGTACAGCAACTGACTTGTCCTCGTCTCTCGTGGTCGTGG
C---------TGCAGCTGGCGAAGCTGTACAAGAACGTGGTGGGCACGGACACGAGCGCGCAGCAGCTGGCGTACGCGCC
GGCCCTCCCCAACGTGCGCTACGCCCACACCCCGGCGGACCTGCCCCTCGAAGGCATCCACGCGGCCGTCGCCCCGCCGG
GCTCCGTCGACGTGGTCACCGTGGCGCAGGCCTTCCACTGGCTCGACCTGCCGCGCTTCTACGCGCAGGTCCGCTCCCTC
CTGCGCGCGCACGGCGTCCTCGCCGCATGGTGCTACACAGAGCCCCGCGTGGGCGCCGCGGTCGACGCCGTCTTCTGGCG
CCTCTACGACGGCTCGCAGCCGCACTGGGCGCCCAACCGGAAGATGGTCGACGACGAGTACCGCAGCGCCGACTTCCCCT
TCGACCCCGTCGACGGCGAGACCCACACGGGCCCCTTCGAGTTCTCCACCGACCGCCGCATGGACCTCGACGACTACTTC
ACCTACATCAAGTCCTGGTCCGCGTACCAGACCGCCAAGGACAATGGCGTCGAGCTGCTCGACGACGCCACGGTCCAGGA
CTTCGCCGACGCGTGGGGCGGCGACCGCGAGGAGGTCAAGACGGTGAGGTACCCCATCTTCCTCAGGATCGGCAAGGTGA
GGCCTTGAGAATCAACGAATGCAGC------ATG--ATGCAAGTGGCCTTGAGAAAAGGGACGCTTTCATGTCTGCACGT
GACGATCGAAGTGACCATGGTGCAAAATGCCGAGCAGCGTACGTGTGCCGCCGCTGGACCATTTTATTTGCATTCCACGC
TCTTTTT-ACAGGACGAAGTGATTTTTGGCATCCTGCTACTACTATCCCGTTCCTATTCCTATTCCAAATTCAGCGTGTA
ACAAATAATGGTATATATTCCTAGTATCCATCCCATTTTCTAGACAAAAAATTGTAAGTTGTGGATGTTACCTTTGTCTA
TCGTATAGTATATGAATATTATTTTTGC----------------------------------------------------
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------------------------------
>chr2A_381
--------------------------------------------------------------------------------
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------------------------------------------------------------ATTTCTTGTGTGAATATGGT
GCTTGCTTTAATTATAAAGTGAGATGAAAGTGTGCTATGAAAGGATAAATGTTTTGCGGTTGAACTACATAAAAATTTAG
AGTTGTGAACTC----TAGGATAAATTTTCACCCGCAAAAAGAAAAGGAAAAA---CTCTTAAGGGTAAATTTAGGGAGC
AATTTGGACTTCCGTGGAGCCGGAGAAAAG-GATGCAGCGGCGGCGCGGATGTGATTCGGTGAGAGATAGCAAGAGTTTG
CC-------------TGGGCCGCAATGCAACGAGTGGGAGGAAAAAAGACTGGGCCAGGGCGGGGCGTATCCGAGGAGAA
ACCAAGAGGAAGTTCGCAGGAACTTTCCTGTGACAACACAAGACACGTGCGAGCGAACACAAGACACGTGCGAGCGAACT
TGTCCTATTTCTCCACGACGCTCCAACCAACCGGAGCCAGTGAGGAGTGAGGAGGAACCATTCAACAGCAGATAGCTTGG
GAAGAAAGCATGGCACGTATTTTCCATGAAAGCACGTCCACGCCGAAGCTCTCTATAAAG---TACGTGCAGTGCACAGA
AAGTATCATCATATCATAGAAAAACAAGCATCCATCTCCTCGGTTCAGCCCACAGCCAACGAACACACGCGAGCG--CAC
GAGTGAGCGAGCGAGAGAGAGAAAGATGGCGAATCTGTTCCTGAAGCAGGCGAAGCACTACGCGGCGGCGCGGCCGGACT
ACCCGGCGGAGCTCTTCCACTTCATCGCGTCCAAGACGGCCCGCCACGACCTCGCGTGGGACGTCGGCACCGGCAGCGGC
CAGGCCGCAGTCTCGGTGAGTCTCCCTCCCCAAGTCCGACCTCCCTCCGAGTTGTCAAAAAAAAAAAAAAGTCCGACCTC
CCTCCATCCCTGCCGCTCCCGTCCATGAGTTTCTCTTCATCTTTGCTTTCTCCATAGCGAAGCCACGGTAGAAAAGCATT
TTTTTAGTGTATAGATTTTGACT--------------------CTTTAAATCTTTGATTGACTAGTCTCGAGAAATTTAC
AATCACCATATATGTGCCTTTTTATGCCGACGTCCCTTTCCATGGACCCATTCTGAGCTTCCTGGTTCGTTTCGACCACT
CGATCAGCATCCCCTTTTTAGCTAGCTAGTTGGAATCTTAC--TATCTCACTACCTCCAATCGTTTTTCTTGCATTCAAC
ATCAGCAATTTCTAGTGGAATTC----AGATACACTTTGTTGTACAGCAACTGACTTGTCCTGGTCTCGTGTGTGTGTGG
CTGCAATGCATGTAGCTGGCGAAGCTGTACAAGAACGTGGTGGGCACGGACACGAGCGCGCAGCAGCTGGGCTACGCGCG
GGAGCTCCCCAACGTGCGCTACGCCCACACCCCGGCGGACCTGCCGCTCGACGGCATCCACGCGGCCGTCGCGCCGCCGG
GCTCGGTTGACGTGGTCACCGTGGCGCAGGCCTTCCACTGGCTCGACCTGCCGCGCTTCTACGCGCAGGTCCGCTCCCTC
CTGCGCCCGCACGGCGTCCTCGCCGCATGGTGCTACACGGAGCCCCGCATGGGGGCCGCCGTCGACGCCGTCTTCTGGCG
CCTCTACGACGGCTCGCAGCCCCACTGGGCGCCCAACCGGAAGATGGTCGACGACGAGTACCGCAGCGCCGACTTCCCCT
TCGACCCCGTCGACGGCGAGACCCACACGGGCCCCTTCGAGTTCTCCACGGAGCGATGCATGAACCTCGACGACTACTTC
ACCTACATCAAGTCCTGGTCCGCGTACCAGACCGCCAAGGACAATGGCGTCGAGCTGCTCGACGCCGAGACTGTGCTGGA
CTTCGCCGACGCGTGGGGCGGCGACCGCGAGGAGGTCAAGACGGTGAGGTACCCCATCTTCCTCAGGATCGGCAAGGTGA
GGCCTTAAGAATCA------GATGCAGCATGATGCAATGCAAGTGGCCTTGAGAAA-GGGACGCTTTCATGTCTGCACGT
CACGATCGAAGTGACGATGGTGCAAAATGCCGAGCAGCGTACGTGTGCCGCCGCTGGACCATTTTATTTGTATTCC----
------------------------------------------------CC-TCCTATTCCTATTCCAAATTCAGCGTGTA
ACAAATGG-------TATTCCTAGTATCCATCCCATTTT--AGACAAATAATTGTAAGTTGTGGATGTTACCTTTGTCTA
TCATAT-----ATGAATGTTATTTTTGC----------------------------------------------------
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------------------------------
>chr2D_2502
GTTTTTTTCTT---------------------------------------------------------------------
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---------------------------CCACTTTAGCTATATGTAAGTTGCCTGAAAATTGAATTAGGGTCAGCCGATTT
TTCTGACTGTTGATTGCTGCTTCAAGATCCGCGCTTCCTTTTCTTT---TCCTGTTGTGTGTTGTGTCTGATTT-GGGTT
GGGAATTCAACTGACCAGTGTTTTGGGCTAGTCAAACCTTAGA------------ATCAGCCCGTATGACGACCCAGCCT
TCCTCTATCCTCTTCTGTTTTTGTCTATCTTTTTTT--T-CTGTT----TACTTGCCTTTTGCTTTT------------C
TTTTTATT-----------TTTCTTTATTAGTCGGTTTTAAAATT-TTATTTTATGGGTATTTTTAGGATGTTGGTTGGG
TGTAAATGTATGTACATAAATACTATTCCCTCAGTTTTTTAAATATAAGTCTTTTTAAACATTTTAAATAGATTACAACA
TATGTACGTATGTAGACATATTTTAGAGTGTAGATTCATTCATTTTGCTCCGTACGTAGTCACTTGTTGGAATATTTAAA
AAGACTTATATTTGGGAACAAAGGGAGTATATAATATGTGCAAAAACTGCACTAGTATATAATTATTCTTTGCATATTAT
AGAAA-TGCAAA-TTAGTGT-AAAGTTGTGTGTAAGTTTTTCTTAATTTTCTTTCCTCTCAAGGGGTAATAACAATGTCA
CTAATTAATTCTTCCTTATAAAAATTTATTGTTTTGGTTTTATTCTAGTTCTGATTTTA--TTTTCTTTCTTCTTTAAGG
GTAACACCAATGCCACTAATTCATTGCTTCTTAGAAAACTTCTTGTTT-GCCATAATTGCACTATTGTATGCTTATTCTT
GCATATTTTCAATATGCGCAATTTTAGTGT
>chr5D_2507
TTTTG---------------------------------------------------------------------------
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----------------------------CACTTTAGCTATATGTAAGTTGCCTGAAAATTGAATTAGGGTCAGTCGATTT
TTCTGACCGTTGATTGCTGCTTCAAGACCCGTGCTTCC-TTTTTTA---TTCTGTTGTGTGTTGTGTCTGATTT-GGGCT
GGGAATTCAACTGACCAGTGTTTTGGGCGAGTCAAACCTTAGCAGGCTGAACACCATCAGCCCGTATGACGACCCAGCCT
TCCTCTATCTTCTTCTGTTTTTGTCTATCTTTTTTTCTA----TTTCTATTTG----------TT--TTTTTGCTTTTCT
TTTTTATT-----------TTTCTTTATTAGTCGGTTTTAAAATT-TTATTTTGTGGGTATTTTTAGGATGTTGGTTGGG
TGTAAATGTATGTACATAAATAC---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TATATAATATGTGCAAAAACTGCACTAGTATATAATTATTCTTTGCATATTAT
AAAAAGTGCAAA-TTAGTGT-AAAGTTGTGTGTAAGTTTTTCTTAATTTTCTTTCCTCCCAAAGGGTAATAACTATGCCA
CTAATTAATTCTTTCTTATGAAAATTTATTGTTTTGATTTTATTATAGTTTTTA-TTTTATTTTTCTTTCTTCTTTAAGG
GTAACACCAATGCCACTAATTCTTTGCTTCTTAGAAAACTTCTTGTTT-GCCATAATTGCACTATTGTATGCTTATTCTT
GCATATTTTCAATATGCGCAATTTTAGTGT
>chr6A_2513
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----------------------------CACTTTAGCAATATGTAAGTTGCCTGAAAATTGAATTAGGGTCAGTCGATTT
TTCTGA-CGTTGATTGCTGCTTCAAGATCCGTGCTTCC-TTTTTTTTC-TTCTGTTGTGTGTTGTTTCTGATTT-GGGCT
GGGAATTCAACTGACCAGTGTTTTGGGCGAGTTAAACCTTAGCAGGCTGAAGCCCATCAGCCCATCTGACGACCCAACCT
TCCTCTATCTTCTTTTGTTTTTGTCTATCTTATTTT--T-CTATT----TCTG----------TTTG------------T
TTTTTCTT-----------TGTATTTATTAGACGTCTTTAGAATT-TTATTTTGTTGCTATTTTTAGGATGTTTGGTGGG
TGTAAATGTATGTACATAAATAC---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GATATAATACATGC-AAAAGTGCACTATTATATAATTATTCTTTGCATATTAT
ACAAAATGCAATTTTAGTGC-AAAGTTGTGTCTGTGTTTTTCTTAATTTCTTTTATTTTCAAAGGGTAATAGGAATTC-A
CTAATTAATTC-TTCTTTTAAAACATTATTGCTTTGATTTTATTTTTGATTTTA-TTTA--TTTTCATTCTTCTTTAAGG
GTAACACCAATGCCACTAATTCATTGCTTCTTAGAA------TTTTTT-GCCATAATTGCACTATTGTATGCTTATTCTT
GCATATTTTTAATATGCACAATTTTAGTGT
>chr7A_2516
--------------------------------------------------------------------------------
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-------------------------------TTTAGCTATATGCAAGTTGCCTGAAAATTGAGTTAGGGTCAGTCGATTT
TTCTGACCGTTGATTGCTGCTTCAAGATCTGCGCTTCC-TTTTTTT---TTCTGTTGTGTGTTGTGTCTGATTTTGGGCT
GGAAATTCAATTGACCAGG----------------ACCTTAGCATGCTGAAGCCCATCAGCCCGTATGACGACCCAACCT
TCCTCTATCTTCTTTTGTTTTTGTCTATATTTTTTTCTT-CTGTTTTTATTTG-----------T--TTTTTGCTTTTCT
TTTTTCTT-----------TTTCTTTATTAGTTGGTTTTAAAATT-TTCTTTTATGGATATTTTTAGGATGTTCGGTGGG
CGTAAATGTATGTACATAAATAC---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TATCTAT-ATGTGAAAAAACTGCACTATTATATAATTTTTCTATGCATATTAT
AACAAGTGCAAA-TTAGTGTAAAAGTTGTGTGTAAGTTTGTCTTAATTTTCTTTCCTCTCAAAGGGTAATAACAATGCCA
CTAACTAATTCTTTCTTATAAAACTTTATTGTTTTGATTTAGTTTTAGTTTT-ATTTTA--TTTTCTTCCTTC-TTAAGG
GTAACACCAATGCCACTAATTCATTCCTTCTTAGAAAACTTCTTTTTTTGCCATATTTGCAC-----TATGCTTATTCTT
GCATATTTTGAATATGCGCATTTTGTGT--
>chr6A_2516
--------------------------------------------------------------------------------
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-------------------------------TTTAGCTATATGCAAGTTGCCTGAAAATTGAATTATGGTCAGTCAA-TT
TTCTGACCTTTGATTGATGCTTACAGATCTGTGCTTCC----TTTTTTTTCTTGTTGTGTATTGTGCTTGATTT-GGGCT
GGGAATTCAACTAACCACTGTTTTGGGCGAGTCAAACCTTAGCAGGCTGCAGCCCATCGGCCCATCAGACGACCCAACCT
TCCTCTATCTTTTTTTGTTTTTGCCTATCTTATTTT--T-CAGTT----TTTA----------TTTGCTTTTTATTTTCT
TTTTTCTT-----------TGTATTTATTAGATGGTTTTAAAATT-TTCTTTTGTCGGTATTTTTAGGATGATTGGTGGG
TGTAAATGTATGTACATAAATAC---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TATATATTATGTGCAAAAATTGCACTATTATATAATTATTCTTTGCATATTAT
AAAAAGTGCCATTTTAGTGC-AAGGTTGTGCGTAAGTTTTTCTTATTTTT--TTCTTTTCAAAGGGTAATACGAATGCCA
CTAATTATTGCTTTGATTTTTTA-----------------------------TATTTCA--TTTTCTTTCTTCTTTATGG
GTAACACCAATGCTACTAATTCATTGCTTCTTAGAAAACTTCTTTTTT-GCCATAGTTGCACTATTGTATGCTTATCCTT
GTATATTTTTAATATGCGCAATTTTAGTGT
>chr4D_2522
--------------------------------------------------------------------------------
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-------------------------------------TATATGTAAGTTGCCTGAAAATTAAATTAGGGTCAGTCGATTT
TTCTGACCGTTGATTGCTGCTTCAAGATCCGTGCTT--TTTTTTTT---TTCTGTTGTGTGTCGTGTCTGATTT-GGGCT
GGGAATTCAACTGACCAGTGTTTTGGGCGAGTCAAACCTTAGCAGGCTGAAGCCCATCAGCCCGTATGACGACCCAGCCT
TCCTCTATCTTCTTCTGTTTTTGTCTATCTTTTTTT--TTCTATT----TTTA----------TTTG---TTTATTTATT
TTTTTATT-----------TTTCTTTATTAGTCAGTTTTAAAATT-TTATTTTGTGGGTATTTTTAGGATGTTGGTTGGG
TGTAAATGTATGTACATAAATAC---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TATATAATATGTGCAAAAACTGCACTAGTATATAATTATTCTTTGCATATTAT
AAAAAGTGCAAA-TTAGTGT-AAAGTTGTGTGTAAGTTTTTCTTAATTTTCTTTCCTCTCAAAGAGTAATAACAATGCCA
CTAATTAATTCTTTCTTATAAAAAAATATTGTTTTGATTTTATTCTAGTTTTGATTTTA--TTTTCTTTCTTCTTTAAGG
GTAACACCAACGCCACTAATTCATTGCTTCTTAGAAAACTTCTTGTTT-GCTACAATTGCACTATTATATGCTTATTCTT
-----TTT--AATATGCGCAATTTTAGTGT
>chr4D_2544
--------------------------------------------------------------------------------
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-----------------------------------------------------------TGAATTAGGGTCAGTCGATTT
TTCTGAACGTTGATTGCTGCTTGAAGATCCGTGCTTCC----TTTT---TTCTGTTGTGTGTTGTGTCTGATTT-GGGCC
GGGAATTCAACTGACCAATATTTTGGGCGAATCAAACCTTAGGAGGCTGAAGCCCATCAGCCCGTCTGACGACCTAGGCT
TCCTCTGTCTTCTTTTGTTTTTGTCTATCTTATTTT--T-CTGTT----TTTA----------TTTGTTTTTGCTTTTGT
TTTTTCTT-----------TGTATTTATTAGACGGTTTAAAAAAAATTCTGTTGTCGGTATTTTTAGGATGTTTGGTGGG
TGTAAATGTATGTCCATAAATAC---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TATATAATATGTGCAAAAGCTGCACTATTATATAATTATTCTATGCATATTAT
AAAAAGTGCAATTTTAGTGC-AAAGTGGTGTGTAAGTTTTTCTTAAATTTTTCTCTTTTCAAAAGGTAATACGAATGCAA
ATAATTAATTCTTTCTTTTAAAACTTTATTGCTTTGATTTTATTTTTGTTTTTATTTTA--TTTTCTTTCTTATTTAAGG
GTAACACCAATGCCACTAATTCATTGCTTCTTAGAAAACTT-TTTTTT-GCCATAATTGCACTATTGTATGATTATTCTT
GCATATTT--AATGTGCGCAATTTTAGTGT
>chr6B_2606
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-----------------------------------------TTTTT---TTCTGTTGTTCGTTGTGTCTGATTT-GGGCT
GGGAATTCAACTGACCAGTGTTTTGGGCGAGTCAAACCTTAGCAGGCTGAAGACCATCAGCCCATCTGACGACCTGGCCT
TCCTCTATCTTCTTTTGTTTTTGTCTATCTTATTTT--T-CTCTT----TTTA----------TT--TTTTTCCTTTTCG
TTTTTCTT-----------TGTATCTATTAGACGGTTTTAAAATT-TTCTTTTGTAGGTATTTTTAGGATGTTTGGTGTG
TATAAATGTATGTACATAAATAC---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TATATAATATGTGCAAAAATTGCACTATTATATAATTATTCGTTGCATATTGT
AGAAAGTGCAATTTTAGTGC-AAAGTTGTGTGTAAGTTTTTCTTATTTTT--------TCAAAGGGTAATATGAATGCTA
TTAATTAATTCTTTCTTTTAAAACTTTATTGCTTTGATTTTATAATTATTTTAATTTTA--TTTTCTTTCTTCTTTAAGG
GTAACACCAATGCCACTA---CATTGCTTCTTAGAAAACTT-TTTTTT-GCCATAATTGCACTATTGTATGCTTATTCTT
GCATATTTTTAATATGTGCAATTTTAGTGT
>chr2D_2641
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GGGAATTCAACTGACCAATGTTTTGGGCGAGTCAAACCTTAGCAGGCTGAAGCCCATCAGCCCGTATGACGACCCAGACG
TCCTCTATCTTCTTATGTTTTTGTCTATCTTTTTTT--T-CTGTTTT-ATTTG-----------T--TTTTTGCTTTTAT
TTTTTATT-----------TTTATTTATTAGTCGGTTTTAAAATT-TTATTTTGTGGGTATTTTTAGGATGTTGGTTGGG
TGTAAATGTATGTACATAAATAC---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TATATAATATGTGCAAAAACTGCACTAGTATATAATTATTCTTTGCATATTAT
AAAAAGTGCAAA-TTAGTGT-AAAGTTGTGTGTAAGTTTTTCTTAATTTTCTTTCCTCTCAAAGGGTAATAACAATGCCA
CTAATTATTTCTTTCTTATGAAAATTTATTGTTTTGATTTTATTCTAGTGTTGATTTTA--TTTTCTTTCTTCTTTAAGG
GTAACACCAATGCCACTAATTCATTGCTTCTTAGAAAACTTCTTGTTT-GCCATAATTGCACTATTGTATGCTTATTCTT
GCATATTTTCAATATGCGCAATTTTAGTGT
>SNPs
-S--S--SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------
-S--------SS--S---S---S---------S----------------------S---------------------S-S
SSS-S-SSSS-SSSSS-------S--------------------S--S-----SSS---------S-----S-----S--
------S------S----------------S-------S-----------------------------------------
----------------------------------------------SSSSS-S---------------------------
----------------------------------------------------------SSS-------------------
-----------------------------------S--------------------------------------------
----------------------------------------S------S------------SSS-----------S---S-
-----------------------------------------SS-------------------------------------
-----------------S---------------------------------------------------------S----
--------------------------------------------------------------------------------
--------S-----------S-----------------------------------------------------------
--------------------------------------S--S-----------------------------S--------
-----------S-----------SSSSSSSSSSSSSSSSSSSS------------S-SS-------------S-------
-----S---------------------------S----------------------SSSSSS-SSS--------------
-------------------------------------S---SS-------------------------------------
---------------------S-SSSS-----S-------S---------S-------------SS-------S------
------S----------------------------S--------------------------------------------
---------------------------------------------------S----------------------------
--S-----------------------------------------------------------------SS----------
--------------------------------------------------------------------------------
---------------S--------------S---------------------------------------S---------
----------------------------S---------------------------------------------------
----------------------------------------------------------------------------S---
S---------------------------S------------------S--------------------------------
--------------S-S-SS-----S--------------------------------SS---------S----S-----
--------------S------------------S----------------------------------------------
-------S---------------------------S-------S---------------S--------------------
----------------------------------------------------------S---------------S-----
------------------------------S-------------------------S---------S--S----------
-------S-----------------------------SSS----------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
------S-SSSSSSSSSSS---S---------------------------------------S-----------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------S--S------------
S-------------------------------------------------------------------------------
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------------------------------
>forward_38
------------------CCGACACGGTAGACTGGATC------------------------------------------
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>reverse_1497
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--------------------------------------------------------ATCGTTGCAGCCACTCGATC----
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>forward_136
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------------------------------------AAATGTACCGTGGCTAGCCG------------------------
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>reverse_2269
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----------------------------CAGGAGGTCAAGACGGTGAC--------------------------------
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>forward_1504
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--------------------------------------------GACCCATGCTGAATCGTTGC----------------
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>reverse_2379
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----------------------------------------------------------CCACGCTTTCAAGTCTTCACG-
--------------------------------------------------------------------------------
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------------------------------
