Multiple sequence alignment - TraesCS2A01G576500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G576500 chr2A 100.000 2712 0 0 1 2712 770409158 770411869 0.000000e+00 5009.0
1 TraesCS2A01G576500 chr2B 86.702 1865 117 69 907 2712 790444481 790442689 0.000000e+00 1949.0
2 TraesCS2A01G576500 chr2B 75.244 307 40 29 479 779 790444806 790444530 2.210000e-21 113.0
3 TraesCS2A01G576500 chr2D 85.145 1555 66 77 555 2049 645043932 645045381 0.000000e+00 1439.0
4 TraesCS2A01G576500 chr2D 87.168 678 54 14 2055 2712 645045641 645046305 0.000000e+00 739.0
5 TraesCS2A01G576500 chr1A 89.655 348 27 4 2 345 366314835 366315177 4.150000e-118 435.0
6 TraesCS2A01G576500 chr1A 88.131 337 27 5 13 344 31270074 31269746 3.270000e-104 388.0
7 TraesCS2A01G576500 chr1A 85.552 353 38 9 2 345 589502376 589502028 9.230000e-95 357.0
8 TraesCS2A01G576500 chr3A 88.202 356 27 8 2 352 666225677 666225332 6.990000e-111 411.0
9 TraesCS2A01G576500 chr4A 88.406 345 28 4 2 342 597036204 597035868 3.250000e-109 405.0
10 TraesCS2A01G576500 chr4B 88.218 348 27 5 2 344 640986838 640986500 1.170000e-108 403.0
11 TraesCS2A01G576500 chr4D 87.429 350 30 7 2 345 450365431 450365772 9.100000e-105 390.0
12 TraesCS2A01G576500 chr4D 91.111 45 4 0 1167 1211 322907719 322907763 8.110000e-06 62.1
13 TraesCS2A01G576500 chr5A 86.494 348 35 4 2 345 7582124 7582463 3.300000e-99 372.0
14 TraesCS2A01G576500 chr6A 84.375 352 43 7 2 348 449361884 449362228 4.330000e-88 335.0
15 TraesCS2A01G576500 chr7D 95.337 193 9 0 1090 1282 319910304 319910112 9.430000e-80 307.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G576500 chr2A 770409158 770411869 2711 False 5009 5009 100.0000 1 2712 1 chr2A.!!$F1 2711
1 TraesCS2A01G576500 chr2B 790442689 790444806 2117 True 1031 1949 80.9730 479 2712 2 chr2B.!!$R1 2233
2 TraesCS2A01G576500 chr2D 645043932 645046305 2373 False 1089 1439 86.1565 555 2712 2 chr2D.!!$F1 2157

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
76 77 0.028505 CTTGGCATTGATTCCTCGCG 59.971 55.0 0.0 0.0 0.0 5.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1752 1847 0.047176 AGAGAGGAGGAGGAGGAGGA 59.953 60.0 0.0 0.0 0.0 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 3.202001 CGCCGCCCGTGAATCAAT 61.202 61.111 0.00 0.00 0.00 2.57
35 36 2.408835 GCCGCCCGTGAATCAATG 59.591 61.111 0.00 0.00 0.00 2.82
36 37 3.110139 CCGCCCGTGAATCAATGG 58.890 61.111 0.00 0.00 0.00 3.16
37 38 2.408835 CGCCCGTGAATCAATGGC 59.591 61.111 12.68 12.68 38.74 4.40
38 39 2.405805 CGCCCGTGAATCAATGGCA 61.406 57.895 19.87 0.00 42.27 4.92
39 40 1.889454 GCCCGTGAATCAATGGCAA 59.111 52.632 16.51 0.00 41.76 4.52
40 41 0.179129 GCCCGTGAATCAATGGCAAG 60.179 55.000 16.51 0.00 41.76 4.01
41 42 0.457035 CCCGTGAATCAATGGCAAGG 59.543 55.000 0.00 0.00 0.00 3.61
42 43 0.179129 CCGTGAATCAATGGCAAGGC 60.179 55.000 0.00 0.00 0.00 4.35
43 44 0.813184 CGTGAATCAATGGCAAGGCT 59.187 50.000 0.00 0.00 0.00 4.58
44 45 1.468565 CGTGAATCAATGGCAAGGCTG 60.469 52.381 0.00 0.00 0.00 4.85
45 46 1.820519 GTGAATCAATGGCAAGGCTGA 59.179 47.619 0.00 0.00 0.00 4.26
46 47 1.820519 TGAATCAATGGCAAGGCTGAC 59.179 47.619 0.00 0.00 0.00 3.51
47 48 1.135721 GAATCAATGGCAAGGCTGACC 59.864 52.381 0.00 0.00 0.00 4.02
48 49 1.033746 ATCAATGGCAAGGCTGACCG 61.034 55.000 0.00 0.00 42.76 4.79
49 50 2.361610 AATGGCAAGGCTGACCGG 60.362 61.111 0.00 0.00 42.76 5.28
70 71 3.357504 GCAGCCTTGGCATTGATTC 57.642 52.632 14.54 0.00 0.00 2.52
71 72 0.179092 GCAGCCTTGGCATTGATTCC 60.179 55.000 14.54 0.00 0.00 3.01
72 73 1.481871 CAGCCTTGGCATTGATTCCT 58.518 50.000 14.54 0.00 0.00 3.36
73 74 1.407979 CAGCCTTGGCATTGATTCCTC 59.592 52.381 14.54 0.00 0.00 3.71
74 75 0.383231 GCCTTGGCATTGATTCCTCG 59.617 55.000 6.79 0.00 0.00 4.63
75 76 0.383231 CCTTGGCATTGATTCCTCGC 59.617 55.000 0.00 0.00 0.00 5.03
76 77 0.028505 CTTGGCATTGATTCCTCGCG 59.971 55.000 0.00 0.00 0.00 5.87
77 78 1.375853 TTGGCATTGATTCCTCGCGG 61.376 55.000 6.13 0.00 0.00 6.46
78 79 2.546494 GGCATTGATTCCTCGCGGG 61.546 63.158 6.13 0.59 0.00 6.13
79 80 1.523711 GCATTGATTCCTCGCGGGA 60.524 57.895 8.08 10.34 43.41 5.14
94 95 4.011517 GGAACCGAGGCCGTTGGA 62.012 66.667 16.56 0.00 33.09 3.53
95 96 2.434359 GAACCGAGGCCGTTGGAG 60.434 66.667 16.56 0.00 33.09 3.86
96 97 3.952628 GAACCGAGGCCGTTGGAGG 62.953 68.421 16.56 8.48 33.09 4.30
98 99 3.702048 CCGAGGCCGTTGGAGGAA 61.702 66.667 5.10 0.00 0.00 3.36
99 100 2.125512 CGAGGCCGTTGGAGGAAG 60.126 66.667 0.00 0.00 0.00 3.46
100 101 2.646175 CGAGGCCGTTGGAGGAAGA 61.646 63.158 0.00 0.00 0.00 2.87
101 102 1.079057 GAGGCCGTTGGAGGAAGAC 60.079 63.158 0.00 0.00 0.00 3.01
102 103 2.434359 GGCCGTTGGAGGAAGACG 60.434 66.667 0.00 0.00 36.61 4.18
103 104 2.654877 GCCGTTGGAGGAAGACGA 59.345 61.111 0.00 0.00 38.99 4.20
104 105 1.446272 GCCGTTGGAGGAAGACGAG 60.446 63.158 0.00 0.00 38.99 4.18
105 106 1.215647 CCGTTGGAGGAAGACGAGG 59.784 63.158 0.00 0.00 38.99 4.63
106 107 1.446272 CGTTGGAGGAAGACGAGGC 60.446 63.158 0.00 0.00 38.99 4.70
107 108 1.446272 GTTGGAGGAAGACGAGGCG 60.446 63.158 0.00 0.00 0.00 5.52
108 109 3.296709 TTGGAGGAAGACGAGGCGC 62.297 63.158 0.00 0.00 0.00 6.53
109 110 4.516195 GGAGGAAGACGAGGCGCC 62.516 72.222 21.89 21.89 0.00 6.53
110 111 4.856607 GAGGAAGACGAGGCGCCG 62.857 72.222 23.20 13.22 0.00 6.46
113 114 4.719369 GAAGACGAGGCGCCGTGT 62.719 66.667 23.83 23.83 43.49 4.49
114 115 4.719369 AAGACGAGGCGCCGTGTC 62.719 66.667 33.45 33.45 43.49 3.67
141 142 3.670377 GCTGGTCCGCGGCTTTTT 61.670 61.111 23.51 0.00 0.00 1.94
142 143 2.561373 CTGGTCCGCGGCTTTTTC 59.439 61.111 23.51 6.27 0.00 2.29
143 144 3.308878 CTGGTCCGCGGCTTTTTCG 62.309 63.158 23.51 0.34 0.00 3.46
149 150 4.992294 GCGGCTTTTTCGCGCCAA 62.992 61.111 0.00 0.00 46.62 4.52
150 151 2.354072 CGGCTTTTTCGCGCCAAA 60.354 55.556 0.00 0.00 46.62 3.28
151 152 1.946650 CGGCTTTTTCGCGCCAAAA 60.947 52.632 8.92 8.92 46.62 2.44
152 153 1.562691 GGCTTTTTCGCGCCAAAAC 59.437 52.632 12.58 2.57 45.59 2.43
153 154 1.148759 GGCTTTTTCGCGCCAAAACA 61.149 50.000 12.58 4.11 45.59 2.83
154 155 0.229500 GCTTTTTCGCGCCAAAACAG 59.771 50.000 12.58 13.26 0.00 3.16
155 156 0.229500 CTTTTTCGCGCCAAAACAGC 59.771 50.000 12.58 0.00 0.00 4.40
156 157 0.179124 TTTTTCGCGCCAAAACAGCT 60.179 45.000 12.58 0.00 0.00 4.24
157 158 0.593773 TTTTCGCGCCAAAACAGCTC 60.594 50.000 8.92 0.00 0.00 4.09
158 159 2.709629 TTTCGCGCCAAAACAGCTCG 62.710 55.000 0.00 0.00 39.68 5.03
161 162 4.404654 CGCCAAAACAGCTCGCCC 62.405 66.667 0.00 0.00 0.00 6.13
162 163 4.056125 GCCAAAACAGCTCGCCCC 62.056 66.667 0.00 0.00 0.00 5.80
163 164 3.737172 CCAAAACAGCTCGCCCCG 61.737 66.667 0.00 0.00 0.00 5.73
164 165 3.737172 CAAAACAGCTCGCCCCGG 61.737 66.667 0.00 0.00 0.00 5.73
214 215 4.078516 CGGGTTCGGTCTGGGTCC 62.079 72.222 0.00 0.00 0.00 4.46
216 217 4.754667 GGTTCGGTCTGGGTCCGC 62.755 72.222 0.00 0.00 46.49 5.54
217 218 4.754667 GTTCGGTCTGGGTCCGCC 62.755 72.222 0.00 0.00 46.49 6.13
227 228 4.699522 GGTCCGCCGGAGCTGTTT 62.700 66.667 26.95 0.00 45.63 2.83
228 229 2.668550 GTCCGCCGGAGCTGTTTT 60.669 61.111 5.82 0.00 36.60 2.43
229 230 2.358247 TCCGCCGGAGCTGTTTTC 60.358 61.111 5.05 0.00 36.60 2.29
230 231 3.788766 CCGCCGGAGCTGTTTTCG 61.789 66.667 5.05 0.00 36.60 3.46
231 232 3.788766 CGCCGGAGCTGTTTTCGG 61.789 66.667 5.05 0.00 44.70 4.30
238 239 4.056125 GCTGTTTTCGGCCCAGGC 62.056 66.667 0.00 0.00 45.68 4.85
249 250 3.518068 CCCAGGCCGGCGAAAATC 61.518 66.667 22.54 4.96 0.00 2.17
250 251 3.876198 CCAGGCCGGCGAAAATCG 61.876 66.667 22.54 2.78 43.89 3.34
251 252 2.817834 CAGGCCGGCGAAAATCGA 60.818 61.111 22.54 0.00 43.74 3.59
252 253 2.511600 AGGCCGGCGAAAATCGAG 60.512 61.111 22.54 0.00 43.74 4.04
253 254 4.237809 GGCCGGCGAAAATCGAGC 62.238 66.667 22.54 0.00 43.74 5.03
254 255 3.195698 GCCGGCGAAAATCGAGCT 61.196 61.111 12.58 0.00 43.74 4.09
255 256 3.006706 CCGGCGAAAATCGAGCTC 58.993 61.111 9.30 2.73 43.74 4.09
256 257 2.526120 CCGGCGAAAATCGAGCTCC 61.526 63.158 9.30 0.00 43.74 4.70
257 258 1.519455 CGGCGAAAATCGAGCTCCT 60.519 57.895 8.47 0.00 43.74 3.69
258 259 1.756375 CGGCGAAAATCGAGCTCCTG 61.756 60.000 8.47 0.00 43.74 3.86
259 260 0.741221 GGCGAAAATCGAGCTCCTGT 60.741 55.000 8.47 0.00 43.74 4.00
260 261 0.371645 GCGAAAATCGAGCTCCTGTG 59.628 55.000 8.47 0.00 43.74 3.66
261 262 1.002366 CGAAAATCGAGCTCCTGTGG 58.998 55.000 8.47 0.00 43.74 4.17
262 263 0.729690 GAAAATCGAGCTCCTGTGGC 59.270 55.000 8.47 0.00 0.00 5.01
263 264 1.021390 AAAATCGAGCTCCTGTGGCG 61.021 55.000 8.47 0.00 34.52 5.69
264 265 4.521062 ATCGAGCTCCTGTGGCGC 62.521 66.667 8.47 0.00 34.52 6.53
315 316 2.728397 AAAAACGCCTGGGAAGACC 58.272 52.632 0.00 0.00 40.81 3.85
316 317 0.185175 AAAAACGCCTGGGAAGACCT 59.815 50.000 0.00 0.00 41.11 3.85
317 318 0.185175 AAAACGCCTGGGAAGACCTT 59.815 50.000 0.00 0.00 41.11 3.50
318 319 0.250770 AAACGCCTGGGAAGACCTTC 60.251 55.000 0.00 1.27 41.11 3.46
327 328 1.219393 GAAGACCTTCCTGGAGGCG 59.781 63.158 10.85 3.22 40.65 5.52
328 329 2.860972 GAAGACCTTCCTGGAGGCGC 62.861 65.000 0.00 0.00 40.65 6.53
329 330 3.706373 GACCTTCCTGGAGGCGCA 61.706 66.667 10.83 0.00 40.65 6.09
330 331 3.672295 GACCTTCCTGGAGGCGCAG 62.672 68.421 10.83 0.00 40.65 5.18
346 347 2.525784 CAGCTGGAGATGCCCTACT 58.474 57.895 5.57 0.00 34.97 2.57
347 348 1.709578 CAGCTGGAGATGCCCTACTA 58.290 55.000 5.57 0.00 34.97 1.82
348 349 1.342819 CAGCTGGAGATGCCCTACTAC 59.657 57.143 5.57 0.00 34.97 2.73
349 350 1.062886 AGCTGGAGATGCCCTACTACA 60.063 52.381 0.00 0.00 34.97 2.74
350 351 1.974236 GCTGGAGATGCCCTACTACAT 59.026 52.381 0.00 0.00 34.97 2.29
351 352 2.370189 GCTGGAGATGCCCTACTACATT 59.630 50.000 0.00 0.00 34.97 2.71
352 353 3.181450 GCTGGAGATGCCCTACTACATTT 60.181 47.826 0.00 0.00 34.97 2.32
353 354 4.384056 CTGGAGATGCCCTACTACATTTG 58.616 47.826 0.00 0.00 34.97 2.32
354 355 4.037222 TGGAGATGCCCTACTACATTTGA 58.963 43.478 0.00 0.00 34.97 2.69
355 356 4.101585 TGGAGATGCCCTACTACATTTGAG 59.898 45.833 0.00 0.00 34.97 3.02
356 357 4.061596 GAGATGCCCTACTACATTTGAGC 58.938 47.826 0.00 0.00 0.00 4.26
357 358 2.710096 TGCCCTACTACATTTGAGCC 57.290 50.000 0.00 0.00 0.00 4.70
358 359 1.134521 TGCCCTACTACATTTGAGCCG 60.135 52.381 0.00 0.00 0.00 5.52
359 360 1.134491 GCCCTACTACATTTGAGCCGT 60.134 52.381 0.00 0.00 0.00 5.68
360 361 2.679930 GCCCTACTACATTTGAGCCGTT 60.680 50.000 0.00 0.00 0.00 4.44
361 362 3.606687 CCCTACTACATTTGAGCCGTTT 58.393 45.455 0.00 0.00 0.00 3.60
362 363 4.761975 CCCTACTACATTTGAGCCGTTTA 58.238 43.478 0.00 0.00 0.00 2.01
363 364 4.809426 CCCTACTACATTTGAGCCGTTTAG 59.191 45.833 0.00 0.00 0.00 1.85
364 365 4.270325 CCTACTACATTTGAGCCGTTTAGC 59.730 45.833 0.00 0.00 0.00 3.09
371 372 2.669240 AGCCGTTTAGCTCCACCC 59.331 61.111 0.00 0.00 39.48 4.61
372 373 2.818274 GCCGTTTAGCTCCACCCG 60.818 66.667 0.00 0.00 0.00 5.28
373 374 2.125269 CCGTTTAGCTCCACCCGG 60.125 66.667 0.00 0.00 0.00 5.73
374 375 2.818274 CGTTTAGCTCCACCCGGC 60.818 66.667 0.00 0.00 0.00 6.13
375 376 2.818274 GTTTAGCTCCACCCGGCG 60.818 66.667 0.00 0.00 0.00 6.46
376 377 3.315949 TTTAGCTCCACCCGGCGT 61.316 61.111 6.01 0.00 0.00 5.68
377 378 2.886134 TTTAGCTCCACCCGGCGTT 61.886 57.895 6.01 0.00 0.00 4.84
378 379 2.400269 TTTAGCTCCACCCGGCGTTT 62.400 55.000 6.01 0.00 0.00 3.60
379 380 2.400269 TTAGCTCCACCCGGCGTTTT 62.400 55.000 6.01 0.00 0.00 2.43
380 381 2.791501 TAGCTCCACCCGGCGTTTTC 62.792 60.000 6.01 0.00 0.00 2.29
381 382 3.053896 CTCCACCCGGCGTTTTCC 61.054 66.667 6.01 0.00 0.00 3.13
382 383 3.835790 CTCCACCCGGCGTTTTCCA 62.836 63.158 6.01 0.00 0.00 3.53
383 384 2.675075 CCACCCGGCGTTTTCCAT 60.675 61.111 6.01 0.00 0.00 3.41
384 385 2.272447 CCACCCGGCGTTTTCCATT 61.272 57.895 6.01 0.00 0.00 3.16
385 386 1.663173 CACCCGGCGTTTTCCATTT 59.337 52.632 6.01 0.00 0.00 2.32
386 387 0.388006 CACCCGGCGTTTTCCATTTC 60.388 55.000 6.01 0.00 0.00 2.17
387 388 0.824182 ACCCGGCGTTTTCCATTTCA 60.824 50.000 6.01 0.00 0.00 2.69
388 389 0.109319 CCCGGCGTTTTCCATTTCAG 60.109 55.000 6.01 0.00 0.00 3.02
389 390 0.596082 CCGGCGTTTTCCATTTCAGT 59.404 50.000 6.01 0.00 0.00 3.41
390 391 1.000717 CCGGCGTTTTCCATTTCAGTT 60.001 47.619 6.01 0.00 0.00 3.16
391 392 2.050691 CGGCGTTTTCCATTTCAGTTG 58.949 47.619 0.00 0.00 0.00 3.16
392 393 2.403259 GGCGTTTTCCATTTCAGTTGG 58.597 47.619 0.00 0.00 35.45 3.77
393 394 2.223947 GGCGTTTTCCATTTCAGTTGGT 60.224 45.455 0.00 0.00 35.64 3.67
394 395 3.004944 GGCGTTTTCCATTTCAGTTGGTA 59.995 43.478 0.00 0.00 35.64 3.25
395 396 4.226761 GCGTTTTCCATTTCAGTTGGTAG 58.773 43.478 0.00 0.00 35.64 3.18
396 397 4.261447 GCGTTTTCCATTTCAGTTGGTAGT 60.261 41.667 0.00 0.00 35.64 2.73
397 398 5.735070 GCGTTTTCCATTTCAGTTGGTAGTT 60.735 40.000 0.00 0.00 35.64 2.24
398 399 6.270064 CGTTTTCCATTTCAGTTGGTAGTTT 58.730 36.000 0.00 0.00 35.64 2.66
399 400 7.419204 CGTTTTCCATTTCAGTTGGTAGTTTA 58.581 34.615 0.00 0.00 35.64 2.01
400 401 8.079809 CGTTTTCCATTTCAGTTGGTAGTTTAT 58.920 33.333 0.00 0.00 35.64 1.40
401 402 9.406828 GTTTTCCATTTCAGTTGGTAGTTTATC 57.593 33.333 0.00 0.00 35.64 1.75
402 403 8.934023 TTTCCATTTCAGTTGGTAGTTTATCT 57.066 30.769 0.00 0.00 35.64 1.98
403 404 7.921786 TCCATTTCAGTTGGTAGTTTATCTG 57.078 36.000 0.00 0.00 35.64 2.90
404 405 6.374333 TCCATTTCAGTTGGTAGTTTATCTGC 59.626 38.462 0.00 0.00 35.64 4.26
405 406 6.150976 CCATTTCAGTTGGTAGTTTATCTGCA 59.849 38.462 0.00 0.00 0.00 4.41
406 407 7.309133 CCATTTCAGTTGGTAGTTTATCTGCAA 60.309 37.037 0.00 0.00 0.00 4.08
407 408 6.554334 TTCAGTTGGTAGTTTATCTGCAAC 57.446 37.500 0.00 0.00 0.00 4.17
408 409 4.688879 TCAGTTGGTAGTTTATCTGCAACG 59.311 41.667 0.00 0.00 31.33 4.10
409 410 4.000988 AGTTGGTAGTTTATCTGCAACGG 58.999 43.478 0.00 0.00 31.33 4.44
410 411 3.965379 TGGTAGTTTATCTGCAACGGA 57.035 42.857 0.00 0.00 0.00 4.69
411 412 3.592059 TGGTAGTTTATCTGCAACGGAC 58.408 45.455 0.00 0.00 0.00 4.79
412 413 2.601763 GGTAGTTTATCTGCAACGGACG 59.398 50.000 0.00 0.00 0.00 4.79
413 414 2.450609 AGTTTATCTGCAACGGACGT 57.549 45.000 0.00 0.00 0.00 4.34
414 415 2.762745 AGTTTATCTGCAACGGACGTT 58.237 42.857 3.99 3.99 39.13 3.99
415 416 3.135994 AGTTTATCTGCAACGGACGTTT 58.864 40.909 7.44 0.00 36.00 3.60
416 417 4.309099 AGTTTATCTGCAACGGACGTTTA 58.691 39.130 7.44 0.00 36.00 2.01
417 418 4.151157 AGTTTATCTGCAACGGACGTTTAC 59.849 41.667 7.44 4.07 36.00 2.01
418 419 2.157834 ATCTGCAACGGACGTTTACA 57.842 45.000 7.44 8.38 36.00 2.41
419 420 1.210870 TCTGCAACGGACGTTTACAC 58.789 50.000 7.44 0.00 36.00 2.90
420 421 1.202440 TCTGCAACGGACGTTTACACT 60.202 47.619 7.44 0.00 36.00 3.55
421 422 1.191647 CTGCAACGGACGTTTACACTC 59.808 52.381 7.44 0.00 36.00 3.51
422 423 1.210870 GCAACGGACGTTTACACTCA 58.789 50.000 7.44 0.00 36.00 3.41
423 424 1.191647 GCAACGGACGTTTACACTCAG 59.808 52.381 7.44 0.00 36.00 3.35
424 425 2.734670 CAACGGACGTTTACACTCAGA 58.265 47.619 7.44 0.00 36.00 3.27
425 426 3.314553 CAACGGACGTTTACACTCAGAT 58.685 45.455 7.44 0.00 36.00 2.90
426 427 2.942710 ACGGACGTTTACACTCAGATG 58.057 47.619 0.00 0.00 0.00 2.90
427 428 2.555325 ACGGACGTTTACACTCAGATGA 59.445 45.455 0.00 0.00 0.00 2.92
428 429 3.005050 ACGGACGTTTACACTCAGATGAA 59.995 43.478 0.00 0.00 0.00 2.57
429 430 4.174009 CGGACGTTTACACTCAGATGAAT 58.826 43.478 0.00 0.00 0.00 2.57
430 431 4.625742 CGGACGTTTACACTCAGATGAATT 59.374 41.667 0.00 0.00 0.00 2.17
431 432 5.444613 CGGACGTTTACACTCAGATGAATTG 60.445 44.000 0.00 0.00 0.00 2.32
432 433 5.283060 ACGTTTACACTCAGATGAATTGC 57.717 39.130 0.00 0.00 0.00 3.56
433 434 4.754618 ACGTTTACACTCAGATGAATTGCA 59.245 37.500 0.00 0.00 0.00 4.08
434 435 5.412594 ACGTTTACACTCAGATGAATTGCAT 59.587 36.000 0.00 0.00 40.77 3.96
453 454 4.791974 GCATCCTGCATTATTCAGTTAGC 58.208 43.478 0.00 0.00 44.26 3.09
454 455 4.518211 GCATCCTGCATTATTCAGTTAGCT 59.482 41.667 0.00 0.00 44.26 3.32
455 456 5.562307 GCATCCTGCATTATTCAGTTAGCTG 60.562 44.000 0.00 0.00 44.26 4.24
456 457 3.879295 TCCTGCATTATTCAGTTAGCTGC 59.121 43.478 0.97 0.00 42.29 5.25
457 458 3.881688 CCTGCATTATTCAGTTAGCTGCT 59.118 43.478 7.57 7.57 42.29 4.24
458 459 4.024218 CCTGCATTATTCAGTTAGCTGCTC 60.024 45.833 4.91 0.00 42.29 4.26
459 460 4.774124 TGCATTATTCAGTTAGCTGCTCT 58.226 39.130 4.91 0.00 42.29 4.09
460 461 5.188434 TGCATTATTCAGTTAGCTGCTCTT 58.812 37.500 4.91 0.00 42.29 2.85
461 462 6.348498 TGCATTATTCAGTTAGCTGCTCTTA 58.652 36.000 4.91 0.00 42.29 2.10
462 463 6.823182 TGCATTATTCAGTTAGCTGCTCTTAA 59.177 34.615 4.91 0.00 42.29 1.85
463 464 7.128976 GCATTATTCAGTTAGCTGCTCTTAAC 58.871 38.462 4.91 5.47 42.29 2.01
464 465 6.887376 TTATTCAGTTAGCTGCTCTTAACG 57.113 37.500 4.91 2.76 42.29 3.18
465 466 3.232213 TCAGTTAGCTGCTCTTAACGG 57.768 47.619 4.91 6.51 42.29 4.44
466 467 2.823747 TCAGTTAGCTGCTCTTAACGGA 59.176 45.455 4.91 8.93 42.29 4.69
467 468 3.119459 TCAGTTAGCTGCTCTTAACGGAG 60.119 47.826 4.91 1.98 42.29 4.63
475 476 0.723981 CTCTTAACGGAGCAGCAAGC 59.276 55.000 0.00 0.00 46.19 4.01
518 519 1.669779 GGATGCATTCTCAGTGCTCAC 59.330 52.381 0.00 0.00 42.92 3.51
525 526 0.676184 TCTCAGTGCTCACAGTCACC 59.324 55.000 2.63 0.00 33.90 4.02
529 530 1.373497 GTGCTCACAGTCACCGAGG 60.373 63.158 0.00 0.00 0.00 4.63
530 531 1.530655 TGCTCACAGTCACCGAGGA 60.531 57.895 0.00 0.00 0.00 3.71
531 532 1.214062 GCTCACAGTCACCGAGGAG 59.786 63.158 0.00 0.00 0.00 3.69
532 533 1.244697 GCTCACAGTCACCGAGGAGA 61.245 60.000 0.00 0.00 0.00 3.71
533 534 0.808125 CTCACAGTCACCGAGGAGAG 59.192 60.000 0.00 0.00 0.00 3.20
534 535 0.400594 TCACAGTCACCGAGGAGAGA 59.599 55.000 0.00 0.00 0.00 3.10
535 536 0.808125 CACAGTCACCGAGGAGAGAG 59.192 60.000 0.00 0.00 0.00 3.20
536 537 0.322997 ACAGTCACCGAGGAGAGAGG 60.323 60.000 0.00 0.00 0.00 3.69
537 538 1.034838 CAGTCACCGAGGAGAGAGGG 61.035 65.000 0.00 0.00 0.00 4.30
538 539 1.208844 AGTCACCGAGGAGAGAGGGA 61.209 60.000 0.00 0.00 0.00 4.20
539 540 0.750182 GTCACCGAGGAGAGAGGGAG 60.750 65.000 0.00 0.00 0.00 4.30
540 541 0.914902 TCACCGAGGAGAGAGGGAGA 60.915 60.000 0.00 0.00 0.00 3.71
541 542 0.465460 CACCGAGGAGAGAGGGAGAG 60.465 65.000 0.00 0.00 0.00 3.20
542 543 0.622154 ACCGAGGAGAGAGGGAGAGA 60.622 60.000 0.00 0.00 0.00 3.10
543 544 0.108585 CCGAGGAGAGAGGGAGAGAG 59.891 65.000 0.00 0.00 0.00 3.20
544 545 1.128200 CGAGGAGAGAGGGAGAGAGA 58.872 60.000 0.00 0.00 0.00 3.10
545 546 1.070758 CGAGGAGAGAGGGAGAGAGAG 59.929 61.905 0.00 0.00 0.00 3.20
546 547 2.408565 GAGGAGAGAGGGAGAGAGAGA 58.591 57.143 0.00 0.00 0.00 3.10
547 548 2.370189 GAGGAGAGAGGGAGAGAGAGAG 59.630 59.091 0.00 0.00 0.00 3.20
548 549 2.022035 AGGAGAGAGGGAGAGAGAGAGA 60.022 54.545 0.00 0.00 0.00 3.10
549 550 2.370189 GGAGAGAGGGAGAGAGAGAGAG 59.630 59.091 0.00 0.00 0.00 3.20
550 551 3.309296 GAGAGAGGGAGAGAGAGAGAGA 58.691 54.545 0.00 0.00 0.00 3.10
551 552 3.312890 AGAGAGGGAGAGAGAGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
552 553 3.051803 AGAGAGGGAGAGAGAGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
577 578 1.896183 TGGTTCACCACGTGCCATG 60.896 57.895 10.91 8.18 42.01 3.66
601 606 2.434843 CCCATCCCTGCTACGCTGA 61.435 63.158 0.00 0.00 0.00 4.26
602 607 1.227380 CCATCCCTGCTACGCTGAC 60.227 63.158 0.00 0.00 0.00 3.51
606 611 2.882777 CCTGCTACGCTGACGCTG 60.883 66.667 0.00 0.00 45.53 5.18
613 618 4.749310 CGCTGACGCTGCCCTTCT 62.749 66.667 0.00 0.00 0.00 2.85
627 632 3.328931 TGCCCTTCTGTGAATCTTCTCTT 59.671 43.478 0.00 0.00 0.00 2.85
634 639 4.156922 TCTGTGAATCTTCTCTTCTCCGTC 59.843 45.833 0.00 0.00 0.00 4.79
651 657 3.031736 CCGTCTCCTTTAATCTCCTCCA 58.968 50.000 0.00 0.00 0.00 3.86
690 706 9.944376 TTCTAATTACTTGACAGCTAGTGAAAT 57.056 29.630 0.00 0.00 32.42 2.17
691 707 9.371136 TCTAATTACTTGACAGCTAGTGAAATG 57.629 33.333 0.00 0.00 32.42 2.32
692 708 7.986085 AATTACTTGACAGCTAGTGAAATGT 57.014 32.000 0.00 0.00 32.42 2.71
693 709 7.986085 ATTACTTGACAGCTAGTGAAATGTT 57.014 32.000 0.00 0.00 32.42 2.71
694 710 7.801716 TTACTTGACAGCTAGTGAAATGTTT 57.198 32.000 0.00 0.00 32.42 2.83
696 712 7.190920 ACTTGACAGCTAGTGAAATGTTTAC 57.809 36.000 0.00 0.00 0.00 2.01
697 713 6.204882 ACTTGACAGCTAGTGAAATGTTTACC 59.795 38.462 0.00 0.00 0.00 2.85
699 715 5.700832 TGACAGCTAGTGAAATGTTTACCAG 59.299 40.000 0.00 0.00 0.00 4.00
700 716 5.621193 ACAGCTAGTGAAATGTTTACCAGT 58.379 37.500 0.00 0.00 0.00 4.00
706 725 6.780706 AGTGAAATGTTTACCAGTAACTCG 57.219 37.500 0.00 0.00 0.00 4.18
714 733 1.736645 CCAGTAACTCGCCACGGTG 60.737 63.158 0.00 0.00 0.00 4.94
726 745 1.269206 GCCACGGTGCATTATGATTGG 60.269 52.381 1.68 0.00 0.00 3.16
767 786 2.941480 AGAAGCATCCAATGATCCACC 58.059 47.619 0.00 0.00 0.00 4.61
807 827 8.627487 TGGCGTAAATAAAATAAAAGCATCAG 57.373 30.769 0.00 0.00 0.00 2.90
821 841 1.673168 CATCAGCTTTACCTCTGCCC 58.327 55.000 0.00 0.00 0.00 5.36
822 842 1.065199 CATCAGCTTTACCTCTGCCCA 60.065 52.381 0.00 0.00 0.00 5.36
824 844 1.065199 TCAGCTTTACCTCTGCCCATG 60.065 52.381 0.00 0.00 0.00 3.66
825 845 0.257039 AGCTTTACCTCTGCCCATGG 59.743 55.000 4.14 4.14 0.00 3.66
826 846 0.255890 GCTTTACCTCTGCCCATGGA 59.744 55.000 15.22 0.00 0.00 3.41
827 847 2.019156 GCTTTACCTCTGCCCATGGAC 61.019 57.143 15.22 0.55 0.00 4.02
828 848 1.281867 CTTTACCTCTGCCCATGGACA 59.718 52.381 15.22 7.03 0.00 4.02
829 849 1.367346 TTACCTCTGCCCATGGACAA 58.633 50.000 15.22 0.00 0.00 3.18
830 850 0.911769 TACCTCTGCCCATGGACAAG 59.088 55.000 15.22 8.19 0.00 3.16
831 851 1.751927 CCTCTGCCCATGGACAAGC 60.752 63.158 15.22 8.71 0.00 4.01
832 852 1.001764 CTCTGCCCATGGACAAGCA 60.002 57.895 15.22 13.37 0.00 3.91
833 853 0.609957 CTCTGCCCATGGACAAGCAA 60.610 55.000 15.22 4.63 34.26 3.91
834 854 0.609957 TCTGCCCATGGACAAGCAAG 60.610 55.000 15.22 8.31 34.26 4.01
835 855 2.221906 CTGCCCATGGACAAGCAAGC 62.222 60.000 15.22 5.80 34.26 4.01
836 856 2.277591 GCCCATGGACAAGCAAGCA 61.278 57.895 15.22 0.00 0.00 3.91
837 857 1.818959 GCCCATGGACAAGCAAGCAA 61.819 55.000 15.22 0.00 0.00 3.91
838 858 0.680618 CCCATGGACAAGCAAGCAAA 59.319 50.000 15.22 0.00 0.00 3.68
839 859 1.070445 CCCATGGACAAGCAAGCAAAA 59.930 47.619 15.22 0.00 0.00 2.44
840 860 2.409975 CCATGGACAAGCAAGCAAAAG 58.590 47.619 5.56 0.00 0.00 2.27
841 861 1.796459 CATGGACAAGCAAGCAAAAGC 59.204 47.619 0.00 0.00 0.00 3.51
867 887 1.768684 GCTCACTCCCCACCTTCACA 61.769 60.000 0.00 0.00 0.00 3.58
868 888 0.035458 CTCACTCCCCACCTTCACAC 59.965 60.000 0.00 0.00 0.00 3.82
898 920 4.106925 CTCCACTGCCCAGCTCCC 62.107 72.222 0.00 0.00 0.00 4.30
900 922 3.970410 CCACTGCCCAGCTCCCAA 61.970 66.667 0.00 0.00 0.00 4.12
901 923 2.357836 CACTGCCCAGCTCCCAAT 59.642 61.111 0.00 0.00 0.00 3.16
902 924 1.751927 CACTGCCCAGCTCCCAATC 60.752 63.158 0.00 0.00 0.00 2.67
903 925 1.927527 ACTGCCCAGCTCCCAATCT 60.928 57.895 0.00 0.00 0.00 2.40
904 926 1.153005 CTGCCCAGCTCCCAATCTC 60.153 63.158 0.00 0.00 0.00 2.75
905 927 1.918467 CTGCCCAGCTCCCAATCTCA 61.918 60.000 0.00 0.00 0.00 3.27
909 931 0.179936 CCAGCTCCCAATCTCAGTCC 59.820 60.000 0.00 0.00 0.00 3.85
963 988 3.306613 AGTAAAATACTCCTCCCTCCCG 58.693 50.000 0.00 0.00 32.47 5.14
964 989 2.563039 AAAATACTCCTCCCTCCCGA 57.437 50.000 0.00 0.00 0.00 5.14
965 990 1.790818 AAATACTCCTCCCTCCCGAC 58.209 55.000 0.00 0.00 0.00 4.79
966 991 0.105607 AATACTCCTCCCTCCCGACC 60.106 60.000 0.00 0.00 0.00 4.79
1249 1303 4.405671 TCGTCCTCTCCGCCGTCT 62.406 66.667 0.00 0.00 0.00 4.18
1374 1428 0.250295 TCAACGGCTTCAGGTCCTTG 60.250 55.000 0.00 0.00 0.00 3.61
1376 1438 2.747855 CGGCTTCAGGTCCTTGCC 60.748 66.667 14.37 14.37 40.14 4.52
1390 1452 4.022762 GGTCCTTGCCTCTTTCTTTCTTTC 60.023 45.833 0.00 0.00 0.00 2.62
1391 1453 4.824537 GTCCTTGCCTCTTTCTTTCTTTCT 59.175 41.667 0.00 0.00 0.00 2.52
1392 1454 5.300539 GTCCTTGCCTCTTTCTTTCTTTCTT 59.699 40.000 0.00 0.00 0.00 2.52
1393 1455 5.893824 TCCTTGCCTCTTTCTTTCTTTCTTT 59.106 36.000 0.00 0.00 0.00 2.52
1394 1456 6.039829 TCCTTGCCTCTTTCTTTCTTTCTTTC 59.960 38.462 0.00 0.00 0.00 2.62
1395 1457 6.040278 CCTTGCCTCTTTCTTTCTTTCTTTCT 59.960 38.462 0.00 0.00 0.00 2.52
1396 1458 7.410120 TTGCCTCTTTCTTTCTTTCTTTCTT 57.590 32.000 0.00 0.00 0.00 2.52
1397 1459 7.410120 TGCCTCTTTCTTTCTTTCTTTCTTT 57.590 32.000 0.00 0.00 0.00 2.52
1398 1460 7.484140 TGCCTCTTTCTTTCTTTCTTTCTTTC 58.516 34.615 0.00 0.00 0.00 2.62
1399 1461 7.340487 TGCCTCTTTCTTTCTTTCTTTCTTTCT 59.660 33.333 0.00 0.00 0.00 2.52
1400 1462 8.194104 GCCTCTTTCTTTCTTTCTTTCTTTCTT 58.806 33.333 0.00 0.00 0.00 2.52
1401 1463 9.513727 CCTCTTTCTTTCTTTCTTTCTTTCTTG 57.486 33.333 0.00 0.00 0.00 3.02
1403 1465 9.846248 TCTTTCTTTCTTTCTTTCTTTCTTGTG 57.154 29.630 0.00 0.00 0.00 3.33
1404 1466 8.466086 TTTCTTTCTTTCTTTCTTTCTTGTGC 57.534 30.769 0.00 0.00 0.00 4.57
1405 1467 7.396540 TCTTTCTTTCTTTCTTTCTTGTGCT 57.603 32.000 0.00 0.00 0.00 4.40
1406 1468 7.253422 TCTTTCTTTCTTTCTTTCTTGTGCTG 58.747 34.615 0.00 0.00 0.00 4.41
1407 1469 4.925068 TCTTTCTTTCTTTCTTGTGCTGC 58.075 39.130 0.00 0.00 0.00 5.25
1408 1470 4.398988 TCTTTCTTTCTTTCTTGTGCTGCA 59.601 37.500 0.00 0.00 0.00 4.41
1409 1471 4.717233 TTCTTTCTTTCTTGTGCTGCAA 57.283 36.364 2.77 0.00 35.50 4.08
1422 1484 3.125146 TGTGCTGCAACTACAATCGATTC 59.875 43.478 7.92 0.00 0.00 2.52
1423 1485 2.677836 TGCTGCAACTACAATCGATTCC 59.322 45.455 7.92 0.00 0.00 3.01
1424 1486 2.285834 GCTGCAACTACAATCGATTCCG 60.286 50.000 7.92 0.32 37.07 4.30
1456 1522 4.503910 TCGATCTGGTTGAGTAACAATGG 58.496 43.478 0.00 0.00 40.76 3.16
1458 1524 5.104941 TCGATCTGGTTGAGTAACAATGGAT 60.105 40.000 0.00 0.00 40.76 3.41
1459 1525 5.007039 CGATCTGGTTGAGTAACAATGGATG 59.993 44.000 0.00 0.00 40.76 3.51
1461 1527 4.288366 TCTGGTTGAGTAACAATGGATGGA 59.712 41.667 0.00 0.00 40.76 3.41
1462 1528 5.044919 TCTGGTTGAGTAACAATGGATGGAT 60.045 40.000 0.00 0.00 40.76 3.41
1463 1529 4.949238 TGGTTGAGTAACAATGGATGGATG 59.051 41.667 0.00 0.00 40.76 3.51
1464 1530 4.339247 GGTTGAGTAACAATGGATGGATGG 59.661 45.833 0.00 0.00 40.76 3.51
1466 1532 4.780815 TGAGTAACAATGGATGGATGGTC 58.219 43.478 0.00 0.00 0.00 4.02
1467 1533 4.137543 GAGTAACAATGGATGGATGGTCC 58.862 47.826 0.00 0.00 36.96 4.46
1606 1672 3.701604 CTACCAGGAGCCGCACGAC 62.702 68.421 0.00 0.00 0.00 4.34
1744 1839 2.438392 GCCTAGCTACCACCATTACCTT 59.562 50.000 0.00 0.00 0.00 3.50
1745 1840 3.494573 GCCTAGCTACCACCATTACCTTC 60.495 52.174 0.00 0.00 0.00 3.46
1746 1841 3.967987 CCTAGCTACCACCATTACCTTCT 59.032 47.826 0.00 0.00 0.00 2.85
1747 1842 4.039366 CCTAGCTACCACCATTACCTTCTC 59.961 50.000 0.00 0.00 0.00 2.87
1748 1843 2.772515 AGCTACCACCATTACCTTCTCC 59.227 50.000 0.00 0.00 0.00 3.71
1749 1844 2.772515 GCTACCACCATTACCTTCTCCT 59.227 50.000 0.00 0.00 0.00 3.69
1750 1845 3.181464 GCTACCACCATTACCTTCTCCTC 60.181 52.174 0.00 0.00 0.00 3.71
1751 1846 2.197465 ACCACCATTACCTTCTCCTCC 58.803 52.381 0.00 0.00 0.00 4.30
1752 1847 2.225908 ACCACCATTACCTTCTCCTCCT 60.226 50.000 0.00 0.00 0.00 3.69
1753 1848 2.436173 CCACCATTACCTTCTCCTCCTC 59.564 54.545 0.00 0.00 0.00 3.71
1754 1849 2.436173 CACCATTACCTTCTCCTCCTCC 59.564 54.545 0.00 0.00 0.00 4.30
1755 1850 2.319438 ACCATTACCTTCTCCTCCTCCT 59.681 50.000 0.00 0.00 0.00 3.69
1861 1973 1.006922 GCAAGCAGCACCCAGAAAC 60.007 57.895 0.00 0.00 44.79 2.78
1914 2042 1.350684 TGACATCTGTTTGCCTGCCTA 59.649 47.619 0.00 0.00 0.00 3.93
1956 2092 2.291741 GGATCTTCGTTGGCCATGATTC 59.708 50.000 6.09 5.77 0.00 2.52
1978 2114 2.099592 TGACCAACTCTGCTTTGCTTTG 59.900 45.455 0.00 0.00 0.00 2.77
1979 2115 1.202452 ACCAACTCTGCTTTGCTTTGC 60.202 47.619 0.00 0.00 0.00 3.68
1980 2116 1.068127 CCAACTCTGCTTTGCTTTGCT 59.932 47.619 0.00 0.00 0.00 3.91
1982 2118 3.192466 CAACTCTGCTTTGCTTTGCTTT 58.808 40.909 0.00 0.00 0.00 3.51
1983 2119 3.089573 ACTCTGCTTTGCTTTGCTTTC 57.910 42.857 0.00 0.00 0.00 2.62
1984 2120 2.428171 ACTCTGCTTTGCTTTGCTTTCA 59.572 40.909 0.00 0.00 0.00 2.69
1985 2121 2.793232 CTCTGCTTTGCTTTGCTTTCAC 59.207 45.455 0.00 0.00 0.00 3.18
1986 2122 2.428171 TCTGCTTTGCTTTGCTTTCACT 59.572 40.909 0.00 0.00 0.00 3.41
1987 2123 2.793232 CTGCTTTGCTTTGCTTTCACTC 59.207 45.455 0.00 0.00 0.00 3.51
1988 2124 2.428171 TGCTTTGCTTTGCTTTCACTCT 59.572 40.909 0.00 0.00 0.00 3.24
1989 2125 2.793232 GCTTTGCTTTGCTTTCACTCTG 59.207 45.455 0.00 0.00 0.00 3.35
1990 2126 3.378339 CTTTGCTTTGCTTTCACTCTGG 58.622 45.455 0.00 0.00 0.00 3.86
1991 2127 0.670162 TGCTTTGCTTTCACTCTGGC 59.330 50.000 0.00 0.00 0.00 4.85
2053 2194 3.310501 TCAATCACATCGCATCACACATC 59.689 43.478 0.00 0.00 0.00 3.06
2063 2458 7.227314 ACATCGCATCACACATCTATAATTGTT 59.773 33.333 0.00 0.00 0.00 2.83
2064 2459 6.947258 TCGCATCACACATCTATAATTGTTG 58.053 36.000 0.00 0.00 0.00 3.33
2083 2478 7.962995 TTGTTGTACTATCTGAGATCTTCCT 57.037 36.000 0.00 0.00 0.00 3.36
2084 2479 7.575414 TGTTGTACTATCTGAGATCTTCCTC 57.425 40.000 0.00 0.00 0.00 3.71
2085 2480 7.350382 TGTTGTACTATCTGAGATCTTCCTCT 58.650 38.462 0.00 0.00 34.38 3.69
2086 2481 8.495260 TGTTGTACTATCTGAGATCTTCCTCTA 58.505 37.037 0.00 0.00 34.38 2.43
2089 2484 9.111519 TGTACTATCTGAGATCTTCCTCTATCT 57.888 37.037 0.00 0.00 35.15 1.98
2097 2494 9.695526 CTGAGATCTTCCTCTATCTAAAATGTG 57.304 37.037 0.00 0.00 32.60 3.21
2104 2501 6.504398 TCCTCTATCTAAAATGTGCACTACG 58.496 40.000 19.41 0.85 0.00 3.51
2108 2505 7.485810 TCTATCTAAAATGTGCACTACGCTAA 58.514 34.615 19.41 0.00 43.06 3.09
2125 2522 8.293867 ACTACGCTAAGATAAGAATCACATCTC 58.706 37.037 0.00 0.00 34.28 2.75
2126 2523 7.043961 ACGCTAAGATAAGAATCACATCTCA 57.956 36.000 0.00 0.00 34.28 3.27
2127 2524 7.665690 ACGCTAAGATAAGAATCACATCTCAT 58.334 34.615 0.00 0.00 34.28 2.90
2128 2525 7.812191 ACGCTAAGATAAGAATCACATCTCATC 59.188 37.037 0.00 0.00 34.28 2.92
2129 2526 8.028354 CGCTAAGATAAGAATCACATCTCATCT 58.972 37.037 0.00 0.00 36.21 2.90
2143 2540 2.233186 TCTCATCTGAGAGCAACACTGG 59.767 50.000 5.80 0.00 45.48 4.00
2156 2553 6.428159 AGAGCAACACTGGAAAATACTAACAG 59.572 38.462 0.00 0.00 35.40 3.16
2159 2556 4.918588 ACACTGGAAAATACTAACAGGGG 58.081 43.478 0.00 0.00 36.91 4.79
2203 2604 8.129161 TGTTGCATTCAGACAAGTTTATTTTG 57.871 30.769 0.00 0.00 0.00 2.44
2215 2616 7.625469 ACAAGTTTATTTTGTTTCCCCTTTCA 58.375 30.769 0.00 0.00 35.32 2.69
2288 2695 7.592533 GCAATGGTAGTAAATATGATTGTGCTG 59.407 37.037 0.00 0.00 0.00 4.41
2319 2726 7.629157 TGTTACAACATAATCTCCTTCCATCA 58.371 34.615 0.00 0.00 33.17 3.07
2350 2757 2.877097 TGGCTCTGTTGGCTCAAATA 57.123 45.000 0.00 0.00 0.00 1.40
2357 2764 5.819901 GCTCTGTTGGCTCAAATATCTAGTT 59.180 40.000 0.00 0.00 0.00 2.24
2358 2765 6.238320 GCTCTGTTGGCTCAAATATCTAGTTG 60.238 42.308 0.00 0.00 33.00 3.16
2402 2813 1.606668 GAACAAACAACAGATGCGGGA 59.393 47.619 0.00 0.00 0.00 5.14
2485 2909 1.626654 CCAAATTCACGCGCTCGAGT 61.627 55.000 15.13 0.00 39.41 4.18
2584 3020 1.344942 CGGTGCAGAGCGAGTTGTAC 61.345 60.000 0.00 0.00 46.19 2.90
2689 3125 4.088496 GCATATGTGTTTTCGCAAGTTGAC 59.912 41.667 7.16 0.00 43.76 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.202001 ATTGATTCACGGGCGGCG 61.202 61.111 0.51 0.51 0.00 6.46
18 19 2.408835 CATTGATTCACGGGCGGC 59.591 61.111 0.00 0.00 0.00 6.53
19 20 3.110139 CCATTGATTCACGGGCGG 58.890 61.111 0.00 0.00 0.00 6.13
20 21 2.408835 GCCATTGATTCACGGGCG 59.591 61.111 10.93 0.00 34.56 6.13
21 22 0.179129 CTTGCCATTGATTCACGGGC 60.179 55.000 17.01 17.01 44.82 6.13
22 23 0.457035 CCTTGCCATTGATTCACGGG 59.543 55.000 4.00 1.82 0.00 5.28
23 24 0.179129 GCCTTGCCATTGATTCACGG 60.179 55.000 0.00 0.00 0.00 4.94
24 25 0.813184 AGCCTTGCCATTGATTCACG 59.187 50.000 0.00 0.00 0.00 4.35
25 26 1.820519 TCAGCCTTGCCATTGATTCAC 59.179 47.619 0.00 0.00 0.00 3.18
26 27 1.820519 GTCAGCCTTGCCATTGATTCA 59.179 47.619 0.00 0.00 0.00 2.57
27 28 1.135721 GGTCAGCCTTGCCATTGATTC 59.864 52.381 0.00 0.00 0.00 2.52
28 29 1.188863 GGTCAGCCTTGCCATTGATT 58.811 50.000 0.00 0.00 0.00 2.57
29 30 1.033746 CGGTCAGCCTTGCCATTGAT 61.034 55.000 0.00 0.00 0.00 2.57
30 31 1.675310 CGGTCAGCCTTGCCATTGA 60.675 57.895 0.00 0.00 0.00 2.57
31 32 2.703798 CCGGTCAGCCTTGCCATTG 61.704 63.158 0.00 0.00 0.00 2.82
32 33 2.361610 CCGGTCAGCCTTGCCATT 60.362 61.111 0.00 0.00 0.00 3.16
49 50 4.807039 CAATGCCAAGGCTGCCGC 62.807 66.667 13.96 11.58 42.51 6.53
50 51 1.952102 AATCAATGCCAAGGCTGCCG 61.952 55.000 13.96 0.00 42.51 5.69
51 52 0.179092 GAATCAATGCCAAGGCTGCC 60.179 55.000 11.65 11.65 42.51 4.85
52 53 0.179092 GGAATCAATGCCAAGGCTGC 60.179 55.000 12.96 0.00 42.51 5.25
53 54 1.407979 GAGGAATCAATGCCAAGGCTG 59.592 52.381 12.96 3.28 42.51 4.85
54 55 1.772836 GAGGAATCAATGCCAAGGCT 58.227 50.000 12.96 0.00 42.51 4.58
55 56 0.383231 CGAGGAATCAATGCCAAGGC 59.617 55.000 3.61 3.61 42.35 4.35
56 57 0.383231 GCGAGGAATCAATGCCAAGG 59.617 55.000 0.00 0.00 0.00 3.61
57 58 0.028505 CGCGAGGAATCAATGCCAAG 59.971 55.000 0.00 0.00 0.00 3.61
58 59 2.097444 CGCGAGGAATCAATGCCAA 58.903 52.632 0.00 0.00 0.00 4.52
59 60 3.812203 CGCGAGGAATCAATGCCA 58.188 55.556 0.00 0.00 0.00 4.92
77 78 3.952628 CTCCAACGGCCTCGGTTCC 62.953 68.421 0.00 0.00 41.39 3.62
78 79 2.434359 CTCCAACGGCCTCGGTTC 60.434 66.667 0.00 0.00 41.39 3.62
79 80 4.016706 CCTCCAACGGCCTCGGTT 62.017 66.667 0.00 0.00 41.39 4.44
81 82 3.665675 CTTCCTCCAACGGCCTCGG 62.666 68.421 0.00 0.00 41.39 4.63
82 83 2.125512 CTTCCTCCAACGGCCTCG 60.126 66.667 0.00 0.00 43.02 4.63
83 84 1.079057 GTCTTCCTCCAACGGCCTC 60.079 63.158 0.00 0.00 0.00 4.70
84 85 2.943978 CGTCTTCCTCCAACGGCCT 61.944 63.158 0.00 0.00 32.96 5.19
85 86 2.434359 CGTCTTCCTCCAACGGCC 60.434 66.667 0.00 0.00 32.96 6.13
86 87 1.446272 CTCGTCTTCCTCCAACGGC 60.446 63.158 0.00 0.00 37.05 5.68
87 88 1.215647 CCTCGTCTTCCTCCAACGG 59.784 63.158 0.00 0.00 37.05 4.44
88 89 1.446272 GCCTCGTCTTCCTCCAACG 60.446 63.158 0.00 0.00 37.74 4.10
89 90 1.446272 CGCCTCGTCTTCCTCCAAC 60.446 63.158 0.00 0.00 0.00 3.77
90 91 2.970639 CGCCTCGTCTTCCTCCAA 59.029 61.111 0.00 0.00 0.00 3.53
91 92 3.760035 GCGCCTCGTCTTCCTCCA 61.760 66.667 0.00 0.00 0.00 3.86
92 93 4.516195 GGCGCCTCGTCTTCCTCC 62.516 72.222 22.15 0.00 0.00 4.30
93 94 4.856607 CGGCGCCTCGTCTTCCTC 62.857 72.222 26.68 0.00 0.00 3.71
96 97 4.719369 ACACGGCGCCTCGTCTTC 62.719 66.667 26.68 0.00 41.86 2.87
97 98 4.719369 GACACGGCGCCTCGTCTT 62.719 66.667 28.27 12.17 41.86 3.01
124 125 3.610791 GAAAAAGCCGCGGACCAGC 62.611 63.158 33.48 13.60 0.00 4.85
125 126 2.561373 GAAAAAGCCGCGGACCAG 59.439 61.111 33.48 0.95 0.00 4.00
126 127 3.350612 CGAAAAAGCCGCGGACCA 61.351 61.111 33.48 0.00 0.00 4.02
127 128 4.753877 GCGAAAAAGCCGCGGACC 62.754 66.667 33.48 12.91 43.28 4.46
135 136 0.229500 CTGTTTTGGCGCGAAAAAGC 59.771 50.000 28.17 18.54 0.00 3.51
136 137 0.229500 GCTGTTTTGGCGCGAAAAAG 59.771 50.000 28.17 24.82 0.00 2.27
137 138 0.179124 AGCTGTTTTGGCGCGAAAAA 60.179 45.000 28.17 20.66 34.52 1.94
138 139 0.593773 GAGCTGTTTTGGCGCGAAAA 60.594 50.000 23.88 23.88 34.52 2.29
139 140 1.008995 GAGCTGTTTTGGCGCGAAA 60.009 52.632 13.91 13.91 34.52 3.46
140 141 2.637025 GAGCTGTTTTGGCGCGAA 59.363 55.556 12.10 0.00 34.52 4.70
144 145 4.404654 GGGCGAGCTGTTTTGGCG 62.405 66.667 0.00 0.00 34.52 5.69
145 146 4.056125 GGGGCGAGCTGTTTTGGC 62.056 66.667 0.00 0.00 0.00 4.52
146 147 3.737172 CGGGGCGAGCTGTTTTGG 61.737 66.667 0.00 0.00 0.00 3.28
147 148 3.737172 CCGGGGCGAGCTGTTTTG 61.737 66.667 0.00 0.00 0.00 2.44
197 198 4.078516 GGACCCAGACCGAACCCG 62.079 72.222 0.00 0.00 0.00 5.28
210 211 4.699522 AAACAGCTCCGGCGGACC 62.700 66.667 27.46 19.97 44.37 4.46
211 212 2.668550 AAAACAGCTCCGGCGGAC 60.669 61.111 27.46 21.25 44.37 4.79
212 213 2.358247 GAAAACAGCTCCGGCGGA 60.358 61.111 29.14 29.14 44.37 5.54
213 214 3.788766 CGAAAACAGCTCCGGCGG 61.789 66.667 22.51 22.51 44.37 6.13
214 215 3.788766 CCGAAAACAGCTCCGGCG 61.789 66.667 0.00 0.00 44.37 6.46
216 217 3.431725 GGCCGAAAACAGCTCCGG 61.432 66.667 0.00 0.00 44.34 5.14
217 218 3.431725 GGGCCGAAAACAGCTCCG 61.432 66.667 0.00 0.00 0.00 4.63
218 219 2.282180 TGGGCCGAAAACAGCTCC 60.282 61.111 0.00 0.00 0.00 4.70
219 220 2.335712 CCTGGGCCGAAAACAGCTC 61.336 63.158 0.00 0.00 0.00 4.09
220 221 2.282462 CCTGGGCCGAAAACAGCT 60.282 61.111 0.00 0.00 0.00 4.24
221 222 4.056125 GCCTGGGCCGAAAACAGC 62.056 66.667 0.00 0.00 34.56 4.40
232 233 3.518068 GATTTTCGCCGGCCTGGG 61.518 66.667 23.46 6.82 38.63 4.45
233 234 3.876198 CGATTTTCGCCGGCCTGG 61.876 66.667 23.46 7.26 42.50 4.45
234 235 2.813179 CTCGATTTTCGCCGGCCTG 61.813 63.158 23.46 8.15 40.21 4.85
235 236 2.511600 CTCGATTTTCGCCGGCCT 60.512 61.111 23.46 0.00 40.21 5.19
236 237 4.237809 GCTCGATTTTCGCCGGCC 62.238 66.667 23.46 4.12 40.21 6.13
237 238 3.156740 GAGCTCGATTTTCGCCGGC 62.157 63.158 19.07 19.07 40.21 6.13
238 239 2.526120 GGAGCTCGATTTTCGCCGG 61.526 63.158 7.83 0.00 40.21 6.13
239 240 1.519455 AGGAGCTCGATTTTCGCCG 60.519 57.895 7.83 0.00 40.21 6.46
240 241 0.741221 ACAGGAGCTCGATTTTCGCC 60.741 55.000 7.83 0.00 40.21 5.54
241 242 0.371645 CACAGGAGCTCGATTTTCGC 59.628 55.000 7.83 0.00 40.21 4.70
242 243 1.002366 CCACAGGAGCTCGATTTTCG 58.998 55.000 7.83 0.00 42.10 3.46
243 244 0.729690 GCCACAGGAGCTCGATTTTC 59.270 55.000 7.83 0.00 0.00 2.29
244 245 1.021390 CGCCACAGGAGCTCGATTTT 61.021 55.000 7.83 0.00 0.00 1.82
245 246 1.448540 CGCCACAGGAGCTCGATTT 60.449 57.895 7.83 0.00 0.00 2.17
246 247 2.185350 CGCCACAGGAGCTCGATT 59.815 61.111 7.83 0.00 0.00 3.34
247 248 4.521062 GCGCCACAGGAGCTCGAT 62.521 66.667 7.83 0.00 44.91 3.59
261 262 3.670377 AAAAAGGCCCAGTCGCGC 61.670 61.111 0.00 0.00 0.00 6.86
297 298 0.185175 AGGTCTTCCCAGGCGTTTTT 59.815 50.000 0.00 0.00 34.66 1.94
298 299 0.185175 AAGGTCTTCCCAGGCGTTTT 59.815 50.000 0.00 0.00 27.99 2.43
299 300 0.250770 GAAGGTCTTCCCAGGCGTTT 60.251 55.000 0.00 0.00 32.83 3.60
300 301 1.375326 GAAGGTCTTCCCAGGCGTT 59.625 57.895 0.00 0.00 35.41 4.84
301 302 3.069778 GAAGGTCTTCCCAGGCGT 58.930 61.111 0.00 0.00 34.66 5.68
309 310 1.219393 CGCCTCCAGGAAGGTCTTC 59.781 63.158 0.00 2.29 38.79 2.87
310 311 2.960688 GCGCCTCCAGGAAGGTCTT 61.961 63.158 0.00 0.00 38.79 3.01
311 312 3.394836 GCGCCTCCAGGAAGGTCT 61.395 66.667 0.00 0.00 38.79 3.85
312 313 3.672295 CTGCGCCTCCAGGAAGGTC 62.672 68.421 4.18 1.61 38.79 3.85
313 314 3.710722 CTGCGCCTCCAGGAAGGT 61.711 66.667 4.18 0.00 38.79 3.50
315 316 4.093291 AGCTGCGCCTCCAGGAAG 62.093 66.667 4.18 0.00 37.39 3.46
316 317 4.399395 CAGCTGCGCCTCCAGGAA 62.399 66.667 4.18 0.00 37.39 3.36
319 320 4.834453 CTCCAGCTGCGCCTCCAG 62.834 72.222 8.66 0.00 35.93 3.86
321 322 3.859414 ATCTCCAGCTGCGCCTCC 61.859 66.667 8.66 0.00 0.00 4.30
322 323 2.588314 CATCTCCAGCTGCGCCTC 60.588 66.667 8.66 0.00 0.00 4.70
323 324 4.853050 GCATCTCCAGCTGCGCCT 62.853 66.667 8.66 0.00 0.00 5.52
326 327 2.800541 TAGGGCATCTCCAGCTGCG 61.801 63.158 8.66 1.56 37.99 5.18
327 328 1.227793 GTAGGGCATCTCCAGCTGC 60.228 63.158 8.66 0.00 36.52 5.25
328 329 1.342819 GTAGTAGGGCATCTCCAGCTG 59.657 57.143 6.78 6.78 36.21 4.24
329 330 1.062886 TGTAGTAGGGCATCTCCAGCT 60.063 52.381 0.00 0.00 36.21 4.24
330 331 1.414158 TGTAGTAGGGCATCTCCAGC 58.586 55.000 0.00 0.00 36.21 4.85
331 332 4.101585 TCAAATGTAGTAGGGCATCTCCAG 59.898 45.833 0.00 0.00 36.21 3.86
332 333 4.037222 TCAAATGTAGTAGGGCATCTCCA 58.963 43.478 0.00 0.00 36.21 3.86
333 334 4.636249 CTCAAATGTAGTAGGGCATCTCC 58.364 47.826 0.00 0.00 0.00 3.71
334 335 4.061596 GCTCAAATGTAGTAGGGCATCTC 58.938 47.826 0.00 0.00 0.00 2.75
335 336 3.181450 GGCTCAAATGTAGTAGGGCATCT 60.181 47.826 0.00 0.00 0.00 2.90
336 337 3.142174 GGCTCAAATGTAGTAGGGCATC 58.858 50.000 0.00 0.00 0.00 3.91
337 338 2.485479 CGGCTCAAATGTAGTAGGGCAT 60.485 50.000 0.00 0.00 0.00 4.40
338 339 1.134521 CGGCTCAAATGTAGTAGGGCA 60.135 52.381 0.00 0.00 0.00 5.36
339 340 1.134491 ACGGCTCAAATGTAGTAGGGC 60.134 52.381 0.00 0.00 0.00 5.19
340 341 2.981859 ACGGCTCAAATGTAGTAGGG 57.018 50.000 0.00 0.00 0.00 3.53
341 342 4.270325 GCTAAACGGCTCAAATGTAGTAGG 59.730 45.833 0.00 0.00 0.00 3.18
342 343 5.109903 AGCTAAACGGCTCAAATGTAGTAG 58.890 41.667 0.00 0.00 38.24 2.57
343 344 5.080969 AGCTAAACGGCTCAAATGTAGTA 57.919 39.130 0.00 0.00 38.24 1.82
344 345 3.939066 AGCTAAACGGCTCAAATGTAGT 58.061 40.909 0.00 0.00 38.24 2.73
354 355 2.669240 GGGTGGAGCTAAACGGCT 59.331 61.111 0.00 0.00 46.11 5.52
355 356 2.818274 CGGGTGGAGCTAAACGGC 60.818 66.667 0.00 0.00 0.00 5.68
356 357 2.125269 CCGGGTGGAGCTAAACGG 60.125 66.667 0.00 0.00 37.49 4.44
357 358 2.818274 GCCGGGTGGAGCTAAACG 60.818 66.667 2.18 0.00 37.49 3.60
358 359 2.818274 CGCCGGGTGGAGCTAAAC 60.818 66.667 2.18 0.00 37.49 2.01
359 360 2.400269 AAACGCCGGGTGGAGCTAAA 62.400 55.000 12.97 0.00 38.90 1.85
360 361 2.400269 AAAACGCCGGGTGGAGCTAA 62.400 55.000 12.97 0.00 38.90 3.09
361 362 2.791501 GAAAACGCCGGGTGGAGCTA 62.792 60.000 12.97 0.00 38.90 3.32
362 363 4.265056 AAAACGCCGGGTGGAGCT 62.265 61.111 12.97 0.00 38.90 4.09
363 364 3.733960 GAAAACGCCGGGTGGAGC 61.734 66.667 12.97 0.00 38.90 4.70
364 365 3.053896 GGAAAACGCCGGGTGGAG 61.054 66.667 12.97 0.00 41.49 3.86
365 366 2.700407 AATGGAAAACGCCGGGTGGA 62.700 55.000 12.97 0.00 37.49 4.02
366 367 1.811645 AAATGGAAAACGCCGGGTGG 61.812 55.000 12.97 0.00 38.77 4.61
367 368 0.388006 GAAATGGAAAACGCCGGGTG 60.388 55.000 2.18 5.93 0.00 4.61
368 369 0.824182 TGAAATGGAAAACGCCGGGT 60.824 50.000 2.18 0.00 0.00 5.28
369 370 0.109319 CTGAAATGGAAAACGCCGGG 60.109 55.000 2.18 0.00 0.00 5.73
370 371 0.596082 ACTGAAATGGAAAACGCCGG 59.404 50.000 0.00 0.00 0.00 6.13
371 372 2.050691 CAACTGAAATGGAAAACGCCG 58.949 47.619 0.00 0.00 0.00 6.46
372 373 2.223947 ACCAACTGAAATGGAAAACGCC 60.224 45.455 0.00 0.00 40.56 5.68
373 374 3.092334 ACCAACTGAAATGGAAAACGC 57.908 42.857 0.00 0.00 40.56 4.84
374 375 5.432885 ACTACCAACTGAAATGGAAAACG 57.567 39.130 0.00 0.00 40.56 3.60
375 376 9.406828 GATAAACTACCAACTGAAATGGAAAAC 57.593 33.333 0.00 0.00 40.56 2.43
376 377 9.362151 AGATAAACTACCAACTGAAATGGAAAA 57.638 29.630 0.00 0.00 40.56 2.29
377 378 8.792633 CAGATAAACTACCAACTGAAATGGAAA 58.207 33.333 0.00 0.00 40.56 3.13
378 379 7.094377 GCAGATAAACTACCAACTGAAATGGAA 60.094 37.037 0.00 0.00 40.56 3.53
379 380 6.374333 GCAGATAAACTACCAACTGAAATGGA 59.626 38.462 0.00 0.00 40.56 3.41
380 381 6.150976 TGCAGATAAACTACCAACTGAAATGG 59.849 38.462 0.00 0.00 43.84 3.16
381 382 7.144722 TGCAGATAAACTACCAACTGAAATG 57.855 36.000 0.00 0.00 0.00 2.32
382 383 7.573096 CGTTGCAGATAAACTACCAACTGAAAT 60.573 37.037 0.00 0.00 37.62 2.17
383 384 6.293190 CGTTGCAGATAAACTACCAACTGAAA 60.293 38.462 0.00 0.00 37.62 2.69
384 385 5.178623 CGTTGCAGATAAACTACCAACTGAA 59.821 40.000 0.00 0.00 37.62 3.02
385 386 4.688879 CGTTGCAGATAAACTACCAACTGA 59.311 41.667 0.00 0.00 37.62 3.41
386 387 4.142902 CCGTTGCAGATAAACTACCAACTG 60.143 45.833 0.00 0.00 37.62 3.16
387 388 4.000988 CCGTTGCAGATAAACTACCAACT 58.999 43.478 0.00 0.00 37.62 3.16
388 389 3.998341 TCCGTTGCAGATAAACTACCAAC 59.002 43.478 0.00 0.00 37.02 3.77
389 390 3.998341 GTCCGTTGCAGATAAACTACCAA 59.002 43.478 0.00 0.00 0.00 3.67
390 391 3.592059 GTCCGTTGCAGATAAACTACCA 58.408 45.455 0.00 0.00 0.00 3.25
391 392 2.601763 CGTCCGTTGCAGATAAACTACC 59.398 50.000 0.00 0.00 0.00 3.18
392 393 3.248266 ACGTCCGTTGCAGATAAACTAC 58.752 45.455 0.00 0.00 0.00 2.73
393 394 3.581024 ACGTCCGTTGCAGATAAACTA 57.419 42.857 0.00 0.00 0.00 2.24
394 395 2.450609 ACGTCCGTTGCAGATAAACT 57.549 45.000 0.00 0.00 0.00 2.66
395 396 3.531262 AAACGTCCGTTGCAGATAAAC 57.469 42.857 5.76 0.00 38.47 2.01
396 397 4.056740 TGTAAACGTCCGTTGCAGATAAA 58.943 39.130 5.76 0.00 38.47 1.40
397 398 3.429543 GTGTAAACGTCCGTTGCAGATAA 59.570 43.478 5.76 0.00 38.47 1.75
398 399 2.988493 GTGTAAACGTCCGTTGCAGATA 59.012 45.455 5.76 0.00 38.47 1.98
399 400 1.796459 GTGTAAACGTCCGTTGCAGAT 59.204 47.619 5.76 0.00 38.47 2.90
400 401 1.202440 AGTGTAAACGTCCGTTGCAGA 60.202 47.619 5.76 0.00 38.47 4.26
401 402 1.191647 GAGTGTAAACGTCCGTTGCAG 59.808 52.381 5.76 0.00 38.47 4.41
402 403 1.210870 GAGTGTAAACGTCCGTTGCA 58.789 50.000 5.76 5.99 38.47 4.08
403 404 1.191647 CTGAGTGTAAACGTCCGTTGC 59.808 52.381 5.76 3.51 38.47 4.17
404 405 2.734670 TCTGAGTGTAAACGTCCGTTG 58.265 47.619 5.76 0.00 38.47 4.10
405 406 3.005050 TCATCTGAGTGTAAACGTCCGTT 59.995 43.478 0.00 0.00 40.45 4.44
406 407 2.555325 TCATCTGAGTGTAAACGTCCGT 59.445 45.455 0.00 0.00 0.00 4.69
407 408 3.211803 TCATCTGAGTGTAAACGTCCG 57.788 47.619 0.00 0.00 0.00 4.79
408 409 5.671329 GCAATTCATCTGAGTGTAAACGTCC 60.671 44.000 0.00 0.00 0.00 4.79
409 410 5.107104 TGCAATTCATCTGAGTGTAAACGTC 60.107 40.000 0.00 0.00 0.00 4.34
410 411 4.754618 TGCAATTCATCTGAGTGTAAACGT 59.245 37.500 0.00 0.00 0.00 3.99
411 412 5.281693 TGCAATTCATCTGAGTGTAAACG 57.718 39.130 0.00 0.00 0.00 3.60
447 448 3.512033 CTCCGTTAAGAGCAGCTAACT 57.488 47.619 0.00 0.00 0.00 2.24
456 457 0.723981 GCTTGCTGCTCCGTTAAGAG 59.276 55.000 0.00 0.00 38.95 2.85
457 458 1.014044 CGCTTGCTGCTCCGTTAAGA 61.014 55.000 0.00 0.00 40.11 2.10
458 459 1.291877 ACGCTTGCTGCTCCGTTAAG 61.292 55.000 0.00 0.00 40.11 1.85
459 460 1.289109 GACGCTTGCTGCTCCGTTAA 61.289 55.000 12.32 0.00 40.11 2.01
460 461 1.736645 GACGCTTGCTGCTCCGTTA 60.737 57.895 12.32 0.00 40.11 3.18
461 462 3.044305 GACGCTTGCTGCTCCGTT 61.044 61.111 12.32 0.35 40.11 4.44
464 465 3.482783 GACGACGCTTGCTGCTCC 61.483 66.667 0.00 0.00 40.11 4.70
465 466 3.482783 GGACGACGCTTGCTGCTC 61.483 66.667 0.00 0.00 40.11 4.26
466 467 4.299547 TGGACGACGCTTGCTGCT 62.300 61.111 0.00 0.00 40.11 4.24
467 468 4.077188 GTGGACGACGCTTGCTGC 62.077 66.667 0.00 0.00 38.57 5.25
468 469 2.356313 AGTGGACGACGCTTGCTG 60.356 61.111 0.00 0.00 36.22 4.41
469 470 1.802337 TACAGTGGACGACGCTTGCT 61.802 55.000 0.00 0.00 38.00 3.91
470 471 1.372499 TACAGTGGACGACGCTTGC 60.372 57.895 0.00 0.00 38.00 4.01
471 472 0.318360 TGTACAGTGGACGACGCTTG 60.318 55.000 0.00 0.00 38.00 4.01
472 473 0.318445 GTGTACAGTGGACGACGCTT 60.318 55.000 0.00 0.00 38.00 4.68
473 474 1.285023 GTGTACAGTGGACGACGCT 59.715 57.895 0.00 0.00 41.60 5.07
474 475 0.388134 ATGTGTACAGTGGACGACGC 60.388 55.000 0.00 0.00 0.00 5.19
475 476 1.336877 CATGTGTACAGTGGACGACG 58.663 55.000 0.00 0.00 0.00 5.12
476 477 1.271379 TCCATGTGTACAGTGGACGAC 59.729 52.381 20.63 1.27 37.12 4.34
477 478 1.623163 TCCATGTGTACAGTGGACGA 58.377 50.000 20.63 4.90 37.12 4.20
518 519 1.034838 CCCTCTCTCCTCGGTGACTG 61.035 65.000 0.00 0.00 0.00 3.51
525 526 1.070758 CTCTCTCTCCCTCTCTCCTCG 59.929 61.905 0.00 0.00 0.00 4.63
529 530 3.309296 TCTCTCTCTCTCTCCCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
530 531 3.051803 TCTCTCTCTCTCTCTCCCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
531 532 3.309296 TCTCTCTCTCTCTCTCCCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
532 533 3.051803 TCTCTCTCTCTCTCTCTCCCTCT 60.052 52.174 0.00 0.00 0.00 3.69
533 534 3.309296 TCTCTCTCTCTCTCTCTCCCTC 58.691 54.545 0.00 0.00 0.00 4.30
534 535 3.051803 TCTCTCTCTCTCTCTCTCTCCCT 60.052 52.174 0.00 0.00 0.00 4.20
535 536 3.309296 TCTCTCTCTCTCTCTCTCTCCC 58.691 54.545 0.00 0.00 0.00 4.30
536 537 4.219115 TCTCTCTCTCTCTCTCTCTCTCC 58.781 52.174 0.00 0.00 0.00 3.71
537 538 5.279406 CCATCTCTCTCTCTCTCTCTCTCTC 60.279 52.000 0.00 0.00 0.00 3.20
538 539 4.592351 CCATCTCTCTCTCTCTCTCTCTCT 59.408 50.000 0.00 0.00 0.00 3.10
539 540 4.346418 ACCATCTCTCTCTCTCTCTCTCTC 59.654 50.000 0.00 0.00 0.00 3.20
540 541 4.302067 ACCATCTCTCTCTCTCTCTCTCT 58.698 47.826 0.00 0.00 0.00 3.10
541 542 4.696479 ACCATCTCTCTCTCTCTCTCTC 57.304 50.000 0.00 0.00 0.00 3.20
542 543 4.474651 TGAACCATCTCTCTCTCTCTCTCT 59.525 45.833 0.00 0.00 0.00 3.10
543 544 4.576463 GTGAACCATCTCTCTCTCTCTCTC 59.424 50.000 0.00 0.00 0.00 3.20
544 545 4.526970 GTGAACCATCTCTCTCTCTCTCT 58.473 47.826 0.00 0.00 0.00 3.10
545 546 3.632145 GGTGAACCATCTCTCTCTCTCTC 59.368 52.174 0.00 0.00 35.64 3.20
546 547 3.011144 TGGTGAACCATCTCTCTCTCTCT 59.989 47.826 0.00 0.00 42.01 3.10
547 548 3.360867 TGGTGAACCATCTCTCTCTCTC 58.639 50.000 0.00 0.00 42.01 3.20
548 549 3.464720 TGGTGAACCATCTCTCTCTCT 57.535 47.619 0.00 0.00 42.01 3.10
577 578 2.156098 TAGCAGGGATGGGATGGGC 61.156 63.158 0.00 0.00 0.00 5.36
601 606 0.674895 GATTCACAGAAGGGCAGCGT 60.675 55.000 0.00 0.00 0.00 5.07
602 607 0.392193 AGATTCACAGAAGGGCAGCG 60.392 55.000 0.00 0.00 0.00 5.18
603 608 1.742268 GAAGATTCACAGAAGGGCAGC 59.258 52.381 0.00 0.00 0.00 5.25
606 611 3.625649 AGAGAAGATTCACAGAAGGGC 57.374 47.619 0.00 0.00 0.00 5.19
613 618 4.082845 AGACGGAGAAGAGAAGATTCACA 58.917 43.478 0.00 0.00 0.00 3.58
627 632 4.208746 GAGGAGATTAAAGGAGACGGAGA 58.791 47.826 0.00 0.00 0.00 3.71
634 639 6.553100 ACAGTAGATGGAGGAGATTAAAGGAG 59.447 42.308 0.00 0.00 0.00 3.69
685 701 4.453136 GGCGAGTTACTGGTAAACATTTCA 59.547 41.667 0.00 0.00 0.00 2.69
686 702 4.453136 TGGCGAGTTACTGGTAAACATTTC 59.547 41.667 0.00 0.00 0.00 2.17
690 706 2.758009 GTGGCGAGTTACTGGTAAACA 58.242 47.619 0.00 0.00 0.00 2.83
691 707 1.723003 CGTGGCGAGTTACTGGTAAAC 59.277 52.381 0.00 0.00 0.00 2.01
692 708 1.337074 CCGTGGCGAGTTACTGGTAAA 60.337 52.381 0.00 0.00 0.00 2.01
693 709 0.244450 CCGTGGCGAGTTACTGGTAA 59.756 55.000 0.00 0.00 0.00 2.85
694 710 0.895100 ACCGTGGCGAGTTACTGGTA 60.895 55.000 0.00 0.00 0.00 3.25
696 712 1.736645 CACCGTGGCGAGTTACTGG 60.737 63.158 0.00 0.00 0.00 4.00
697 713 2.380410 GCACCGTGGCGAGTTACTG 61.380 63.158 0.00 0.00 0.00 2.74
699 715 1.296056 AATGCACCGTGGCGAGTTAC 61.296 55.000 0.00 0.00 36.28 2.50
700 716 0.246910 TAATGCACCGTGGCGAGTTA 59.753 50.000 0.00 0.00 36.28 2.24
706 725 1.269206 CCAATCATAATGCACCGTGGC 60.269 52.381 0.00 0.00 0.00 5.01
714 733 2.031682 GGAGCGTGACCAATCATAATGC 60.032 50.000 0.00 0.00 37.14 3.56
726 745 1.373497 CACTGGACTGGAGCGTGAC 60.373 63.158 0.00 0.00 0.00 3.67
807 827 0.255890 TCCATGGGCAGAGGTAAAGC 59.744 55.000 13.02 0.00 0.00 3.51
813 833 1.751927 GCTTGTCCATGGGCAGAGG 60.752 63.158 20.30 14.45 0.00 3.69
814 834 0.609957 TTGCTTGTCCATGGGCAGAG 60.610 55.000 20.30 19.26 36.06 3.35
815 835 0.609957 CTTGCTTGTCCATGGGCAGA 60.610 55.000 20.30 9.88 36.06 4.26
817 837 2.277591 GCTTGCTTGTCCATGGGCA 61.278 57.895 17.02 17.02 0.00 5.36
818 838 1.818959 TTGCTTGCTTGTCCATGGGC 61.819 55.000 10.20 10.20 0.00 5.36
819 839 0.680618 TTTGCTTGCTTGTCCATGGG 59.319 50.000 13.02 0.00 0.00 4.00
821 841 1.796459 GCTTTTGCTTGCTTGTCCATG 59.204 47.619 0.00 0.00 43.35 3.66
822 842 1.603678 CGCTTTTGCTTGCTTGTCCAT 60.604 47.619 0.00 0.00 44.80 3.41
824 844 1.551503 GCGCTTTTGCTTGCTTGTCC 61.552 55.000 0.00 0.00 44.80 4.02
825 845 1.551503 GGCGCTTTTGCTTGCTTGTC 61.552 55.000 7.64 0.00 44.80 3.18
826 846 1.592400 GGCGCTTTTGCTTGCTTGT 60.592 52.632 7.64 0.00 44.80 3.16
827 847 1.592131 TGGCGCTTTTGCTTGCTTG 60.592 52.632 7.64 0.00 44.80 4.01
828 848 1.592400 GTGGCGCTTTTGCTTGCTT 60.592 52.632 7.64 0.00 44.80 3.91
829 849 2.028043 GTGGCGCTTTTGCTTGCT 59.972 55.556 7.64 0.00 44.80 3.91
830 850 2.028043 AGTGGCGCTTTTGCTTGC 59.972 55.556 7.64 0.00 44.80 4.01
831 851 2.305127 GCAGTGGCGCTTTTGCTTG 61.305 57.895 18.51 5.96 44.80 4.01
832 852 2.028043 GCAGTGGCGCTTTTGCTT 59.972 55.556 18.51 0.00 44.80 3.91
834 854 2.429739 GAGCAGTGGCGCTTTTGC 60.430 61.111 18.25 18.25 44.01 3.68
835 855 1.370900 GTGAGCAGTGGCGCTTTTG 60.371 57.895 7.64 4.17 44.01 2.44
836 856 1.510480 GAGTGAGCAGTGGCGCTTTT 61.510 55.000 7.64 0.00 44.01 2.27
837 857 1.963338 GAGTGAGCAGTGGCGCTTT 60.963 57.895 7.64 0.00 44.01 3.51
838 858 2.358003 GAGTGAGCAGTGGCGCTT 60.358 61.111 7.64 0.00 44.01 4.68
867 887 0.759346 GTGGAGTGGAGTGGTGAAGT 59.241 55.000 0.00 0.00 0.00 3.01
868 888 1.051812 AGTGGAGTGGAGTGGTGAAG 58.948 55.000 0.00 0.00 0.00 3.02
898 920 2.830923 ACTGAGACTGGGACTGAGATTG 59.169 50.000 0.00 0.00 0.00 2.67
900 922 2.917713 ACTGAGACTGGGACTGAGAT 57.082 50.000 0.00 0.00 0.00 2.75
901 923 2.291024 GGTACTGAGACTGGGACTGAGA 60.291 54.545 0.00 0.00 0.00 3.27
902 924 2.096248 GGTACTGAGACTGGGACTGAG 58.904 57.143 0.00 0.00 0.00 3.35
903 925 1.272536 GGGTACTGAGACTGGGACTGA 60.273 57.143 0.00 0.00 0.00 3.41
904 926 1.187087 GGGTACTGAGACTGGGACTG 58.813 60.000 0.00 0.00 0.00 3.51
905 927 0.323542 CGGGTACTGAGACTGGGACT 60.324 60.000 0.00 0.00 36.31 3.85
963 988 0.688087 ACTCGGAGGGATTGGAGGTC 60.688 60.000 10.23 0.00 0.00 3.85
964 989 0.688087 GACTCGGAGGGATTGGAGGT 60.688 60.000 10.23 0.00 0.00 3.85
965 990 0.687757 TGACTCGGAGGGATTGGAGG 60.688 60.000 10.23 0.00 0.00 4.30
966 991 1.134670 GTTGACTCGGAGGGATTGGAG 60.135 57.143 10.23 0.00 0.00 3.86
1053 1098 4.893601 GCGTAGGAGGAAGCCGCC 62.894 72.222 0.00 0.00 44.04 6.13
1374 1428 7.711846 AGAAAGAAAGAAAGAAAGAAAGAGGC 58.288 34.615 0.00 0.00 0.00 4.70
1390 1452 4.037858 AGTTGCAGCACAAGAAAGAAAG 57.962 40.909 2.55 0.00 39.50 2.62
1391 1453 4.397730 TGTAGTTGCAGCACAAGAAAGAAA 59.602 37.500 2.55 0.00 39.50 2.52
1392 1454 3.944650 TGTAGTTGCAGCACAAGAAAGAA 59.055 39.130 2.55 0.00 39.50 2.52
1393 1455 3.540617 TGTAGTTGCAGCACAAGAAAGA 58.459 40.909 2.55 0.00 39.50 2.52
1394 1456 3.969117 TGTAGTTGCAGCACAAGAAAG 57.031 42.857 2.55 0.00 39.50 2.62
1395 1457 4.554526 CGATTGTAGTTGCAGCACAAGAAA 60.555 41.667 17.96 0.00 39.50 2.52
1396 1458 3.058983 CGATTGTAGTTGCAGCACAAGAA 60.059 43.478 17.96 4.42 39.50 2.52
1397 1459 2.480037 CGATTGTAGTTGCAGCACAAGA 59.520 45.455 17.96 3.62 39.50 3.02
1398 1460 2.480037 TCGATTGTAGTTGCAGCACAAG 59.520 45.455 17.96 9.83 39.50 3.16
1399 1461 2.488952 TCGATTGTAGTTGCAGCACAA 58.511 42.857 16.32 16.32 36.66 3.33
1400 1462 2.162319 TCGATTGTAGTTGCAGCACA 57.838 45.000 2.55 2.59 0.00 4.57
1401 1463 3.485877 GGAATCGATTGTAGTTGCAGCAC 60.486 47.826 16.96 0.00 0.00 4.40
1402 1464 2.677836 GGAATCGATTGTAGTTGCAGCA 59.322 45.455 16.96 0.00 0.00 4.41
1403 1465 2.285834 CGGAATCGATTGTAGTTGCAGC 60.286 50.000 16.96 0.00 39.00 5.25
1404 1466 3.186909 TCGGAATCGATTGTAGTTGCAG 58.813 45.455 16.96 0.00 40.88 4.41
1405 1467 3.239587 TCGGAATCGATTGTAGTTGCA 57.760 42.857 16.96 0.00 40.88 4.08
1422 1484 2.061773 CCAGATCGAATCGGAAATCGG 58.938 52.381 14.08 0.00 39.45 4.18
1423 1485 2.743938 ACCAGATCGAATCGGAAATCG 58.256 47.619 1.76 9.48 40.31 3.34
1424 1486 4.119862 TCAACCAGATCGAATCGGAAATC 58.880 43.478 1.76 0.00 0.00 2.17
1425 1487 4.122776 CTCAACCAGATCGAATCGGAAAT 58.877 43.478 1.76 0.00 0.00 2.17
1426 1488 3.056107 ACTCAACCAGATCGAATCGGAAA 60.056 43.478 1.76 0.00 0.00 3.13
1427 1489 2.496070 ACTCAACCAGATCGAATCGGAA 59.504 45.455 1.76 0.00 0.00 4.30
1428 1490 2.100197 ACTCAACCAGATCGAATCGGA 58.900 47.619 1.76 0.00 0.00 4.55
1429 1491 2.586258 ACTCAACCAGATCGAATCGG 57.414 50.000 1.76 0.00 0.00 4.18
1458 1524 6.891361 CCTATATATTGCAATTGGACCATCCA 59.109 38.462 18.75 0.00 46.61 3.41
1459 1525 6.891908 ACCTATATATTGCAATTGGACCATCC 59.108 38.462 18.75 0.00 36.96 3.51
1461 1527 7.834181 GGTACCTATATATTGCAATTGGACCAT 59.166 37.037 18.75 6.30 0.00 3.55
1462 1528 7.172342 GGTACCTATATATTGCAATTGGACCA 58.828 38.462 18.75 0.00 0.00 4.02
1463 1529 7.172342 TGGTACCTATATATTGCAATTGGACC 58.828 38.462 18.75 14.69 0.00 4.46
1464 1530 7.148239 GCTGGTACCTATATATTGCAATTGGAC 60.148 40.741 18.75 6.44 0.00 4.02
1466 1532 6.183360 CGCTGGTACCTATATATTGCAATTGG 60.183 42.308 18.75 13.86 0.00 3.16
1467 1533 6.183360 CCGCTGGTACCTATATATTGCAATTG 60.183 42.308 18.75 0.00 0.00 2.32
1469 1535 5.428253 CCGCTGGTACCTATATATTGCAAT 58.572 41.667 17.56 17.56 0.00 3.56
1470 1536 4.827692 CCGCTGGTACCTATATATTGCAA 58.172 43.478 14.36 0.00 0.00 4.08
1471 1537 3.369052 GCCGCTGGTACCTATATATTGCA 60.369 47.826 14.36 0.00 0.00 4.08
1472 1538 3.195661 GCCGCTGGTACCTATATATTGC 58.804 50.000 14.36 1.59 0.00 3.56
1473 1539 3.444916 CGCCGCTGGTACCTATATATTG 58.555 50.000 14.36 0.00 0.00 1.90
1475 1541 2.029623 CCGCCGCTGGTACCTATATAT 58.970 52.381 14.36 0.00 0.00 0.86
1476 1542 1.272092 ACCGCCGCTGGTACCTATATA 60.272 52.381 14.36 0.00 41.55 0.86
1477 1543 0.541296 ACCGCCGCTGGTACCTATAT 60.541 55.000 14.36 0.00 41.55 0.86
1478 1544 1.152694 ACCGCCGCTGGTACCTATA 60.153 57.895 14.36 0.00 41.55 1.31
1479 1545 2.443390 ACCGCCGCTGGTACCTAT 60.443 61.111 14.36 0.00 41.55 2.57
1606 1672 0.320374 TGAACTTGGCGAGGTAGGTG 59.680 55.000 6.71 0.00 0.00 4.00
1744 1839 0.996762 GGAGGAGGAGGAGGAGGAGA 60.997 65.000 0.00 0.00 0.00 3.71
1745 1840 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
1746 1841 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
1747 1842 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
1748 1843 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
1749 1844 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
1750 1845 0.998945 AGAGGAGGAGGAGGAGGAGG 60.999 65.000 0.00 0.00 0.00 4.30
1751 1846 0.478507 GAGAGGAGGAGGAGGAGGAG 59.521 65.000 0.00 0.00 0.00 3.69
1752 1847 0.047176 AGAGAGGAGGAGGAGGAGGA 59.953 60.000 0.00 0.00 0.00 3.71
1753 1848 0.185901 CAGAGAGGAGGAGGAGGAGG 59.814 65.000 0.00 0.00 0.00 4.30
1754 1849 0.468029 GCAGAGAGGAGGAGGAGGAG 60.468 65.000 0.00 0.00 0.00 3.69
1755 1850 0.923729 AGCAGAGAGGAGGAGGAGGA 60.924 60.000 0.00 0.00 0.00 3.71
1897 2013 1.098050 GGTAGGCAGGCAAACAGATG 58.902 55.000 0.00 0.00 0.00 2.90
1956 2092 1.602311 AGCAAAGCAGAGTTGGTCAG 58.398 50.000 0.00 0.00 31.22 3.51
1978 2114 3.435186 GCCGGCCAGAGTGAAAGC 61.435 66.667 18.11 0.00 0.00 3.51
1979 2115 1.899437 TAGGCCGGCCAGAGTGAAAG 61.899 60.000 45.13 0.00 38.92 2.62
1980 2116 1.485294 TTAGGCCGGCCAGAGTGAAA 61.485 55.000 45.13 23.47 38.92 2.69
1982 2118 1.686325 GATTAGGCCGGCCAGAGTGA 61.686 60.000 45.13 23.45 38.92 3.41
1983 2119 1.227674 GATTAGGCCGGCCAGAGTG 60.228 63.158 45.13 0.00 38.92 3.51
1984 2120 1.056700 ATGATTAGGCCGGCCAGAGT 61.057 55.000 45.13 29.48 38.92 3.24
1985 2121 0.321122 GATGATTAGGCCGGCCAGAG 60.321 60.000 45.13 0.00 38.92 3.35
1986 2122 1.053835 TGATGATTAGGCCGGCCAGA 61.054 55.000 45.13 32.85 38.92 3.86
1987 2123 0.179020 TTGATGATTAGGCCGGCCAG 60.179 55.000 45.13 0.00 38.92 4.85
1988 2124 0.478072 ATTGATGATTAGGCCGGCCA 59.522 50.000 45.13 28.44 38.92 5.36
1989 2125 1.541588 GAATTGATGATTAGGCCGGCC 59.458 52.381 39.29 39.29 0.00 6.13
1990 2126 2.229792 TGAATTGATGATTAGGCCGGC 58.770 47.619 21.18 21.18 0.00 6.13
1991 2127 4.074259 TGATGAATTGATGATTAGGCCGG 58.926 43.478 0.00 0.00 0.00 6.13
2063 2458 9.111519 AGATAGAGGAAGATCTCAGATAGTACA 57.888 37.037 0.00 0.00 36.30 2.90
2081 2476 5.175856 GCGTAGTGCACATTTTAGATAGAGG 59.824 44.000 21.04 0.00 45.45 3.69
2082 2477 6.204075 GCGTAGTGCACATTTTAGATAGAG 57.796 41.667 21.04 0.00 45.45 2.43
2097 2494 5.977725 TGTGATTCTTATCTTAGCGTAGTGC 59.022 40.000 0.00 0.00 46.98 4.40
2104 2501 9.142515 CAGATGAGATGTGATTCTTATCTTAGC 57.857 37.037 6.13 0.00 42.99 3.09
2108 2505 8.709272 TCTCAGATGAGATGTGATTCTTATCT 57.291 34.615 8.46 3.65 45.09 1.98
2125 2522 2.756840 TCCAGTGTTGCTCTCAGATG 57.243 50.000 0.00 0.00 0.00 2.90
2126 2523 3.777106 TTTCCAGTGTTGCTCTCAGAT 57.223 42.857 0.00 0.00 0.00 2.90
2127 2524 3.558931 TTTTCCAGTGTTGCTCTCAGA 57.441 42.857 0.00 0.00 0.00 3.27
2128 2525 4.999950 AGTATTTTCCAGTGTTGCTCTCAG 59.000 41.667 0.00 0.00 0.00 3.35
2129 2526 4.973168 AGTATTTTCCAGTGTTGCTCTCA 58.027 39.130 0.00 0.00 0.00 3.27
2143 2540 5.944007 TGAAAGCTCCCCTGTTAGTATTTTC 59.056 40.000 0.00 0.00 0.00 2.29
2197 2598 9.336171 CTTGATTTTGAAAGGGGAAACAAAATA 57.664 29.630 13.87 3.06 46.03 1.40
2203 2604 6.405278 TCTCTTGATTTTGAAAGGGGAAAC 57.595 37.500 0.00 0.00 0.00 2.78
2215 2616 9.813446 GGCTATTTCATTTCATCTCTTGATTTT 57.187 29.630 0.00 0.00 33.34 1.82
2239 2645 4.178545 AGCTGTAACAACAAATGATGGC 57.821 40.909 0.00 0.00 0.00 4.40
2318 2725 4.428845 AGCCAAGCTCCCAACATG 57.571 55.556 0.00 0.00 30.62 3.21
2350 2757 9.706691 TTGAGTATTCGTTTTCTTCAACTAGAT 57.293 29.630 0.00 0.00 0.00 1.98
2357 2764 7.713507 TCCTTTCTTGAGTATTCGTTTTCTTCA 59.286 33.333 0.00 0.00 0.00 3.02
2358 2765 8.084590 TCCTTTCTTGAGTATTCGTTTTCTTC 57.915 34.615 0.00 0.00 0.00 2.87
2441 2860 3.372206 AGAAAATCGTTCCATCTCTTGCG 59.628 43.478 0.00 0.00 0.00 4.85
2485 2909 1.135139 GAACGCTATCAGCTGACCTCA 59.865 52.381 20.97 3.72 39.60 3.86
2506 2942 1.581934 CGTGGTGTTCTGAAGCTTGA 58.418 50.000 2.10 0.00 0.00 3.02
2533 2969 2.205911 GCGTGATAAGCCTCTTCCTTC 58.794 52.381 0.00 0.00 0.00 3.46
2534 2970 1.471676 CGCGTGATAAGCCTCTTCCTT 60.472 52.381 0.00 0.00 0.00 3.36
2535 2971 0.103208 CGCGTGATAAGCCTCTTCCT 59.897 55.000 0.00 0.00 0.00 3.36
2536 2972 0.876342 CCGCGTGATAAGCCTCTTCC 60.876 60.000 4.92 0.00 0.00 3.46
2584 3020 1.794785 CAAGCTGTGCGTCAATGCG 60.795 57.895 0.00 0.00 37.81 4.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.