>input_sequence_70974
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------------------------------------------------------------------------ATGGATC-
-----GGCACGGGCAGCACCACCGGCTGGTGACGATG------CCGCGGGAGGGGGAGGCGGCTTCCTCCTACGCGGGA-
-----GGGGGC---GTGGACGTGGTGGCGCGGGAGGCGGCGGCGCAGGCGCTGGGGGCGGTGGTGCAGCTGCACTTCGAC
AAGACGGTGGAGAAGAAGCGCAGCGCCGACGCGCAGAAGCAGGAGCTCTGGCGCCTCTTCCTCGCCTTCTTCCTCTTCCT
CGCGCTCGTCCTCTCCGCCGTCTCCGGCGGGGGCCGCCTCCAGTGCCGCCACCTCTGGGCCCCCGCGGGCCTCCTCTCCC
TCGCCCACCTCGCCTTCTACGCCGCCGTCGCGCACCACCTCCGATGCCTCAACGGCTTCAGGTCCTTG--------CCTC
TTTCTTTCTTTCTTTCTTTCTTGTGCTGCAACTACAATCGATTCCGATTTCCGATTCGATC----TGGTTGAGTAACAAT
GGATGGATGGTCCAATTGCAATATATAGGTACCAGCGGCGGTGCCACAAGCTGACGCTGGCGCTGGCGGCGGACCGGCTG
CGGATGCTCAAGTCGGCGGGGGAGGTGGTGGCGGCCGCCGACGTGGAGGTGCCCTACCAGGAGCCGCACGACACCTACCT
CGCCAAGTTCAAGCGCAGCTGGGCCATCCACTTCGCCTTCCTCATCGCCACCTTCGCCTTCTCCGTCGCCGCCGCCGTCG
CAGTCCTCTGCTTCTAG---------------------------------------------------------------
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>chr2A_1_TraesCS2A01G576500
TGCGCCGTGCCGTGACGCGCCGCCCGTGAATCAATGGCAAGGCTGACCGGCGGCAGCCTTGGCATTGATTCCTCGCGGGA
ACCGAGGCCGTTGGAGGAAGACGAGGCGCCGTGTCGCTAACGCGGCTGGTCCGCGGCTTTTTCGCGCCAAAACAGCTCGC
CCCGGCGCCCCCGGGCGCCCCCCCCCCCCCAGCGCGCCGGGTTCGGTCTGGGTCCGCCGGAGCTGTTTTCGGCCCAGGCC
GGCGAAAATCGAGCTCCTGTGGCGCGACTGGGCCTTTTTTTGGCGCCGACGCAAAAAAAAAACGCCTGGGAAGACCTTCC
TGGAGGCGCAGCTGGAGATGCCCTACTACATTTGAGCCGTTTAGCTCCACCCGGCGTTTTCCATTTCAGTTGGTAGTTTA
TCTGCAACGGACGTTTACACTCAGATGAATTGCATCCTGCATTATTCAGTTAGCTGCTCTTAACGGAGCAGCAAGCGTCG
TCCACTGTACACATGGATGGATGCATTCTCAGTGCTCACAGTCACCGAGGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAT
GGTTCACCACGTGCCATG----CCCATCCCATCCCTGCTACGCTGACGCTGCCCTTCTGTGAATCTTCTCTTCTCCGTCT
-CCTTTAATCTCCTCCATCTACTGTAATATTCTAATTAC--T--------TGACAGCTAGTGAAATGTTTACCAGTA---
ACTCGCCACGGTGCATTATGATTGGTCACGCTCCAGTCCAGTGCAAGAAGCATCCAATGATCCACCCATGGCCATGGCCA
TGGCGTAAATAAAATAAAA-GCATCAGCTTTACCTCTGCCCATGGACAAGCAAGCAAAAGCGCCACTGCTCACTCCCCAC
CTTCACACTTCACCACTCCACT--CCACTGCCCAGCTCCCAATCTCAGTCCCAGTCTCAGTACCCGAGCTCCGGCCGCGA
GCGAGTAAAATACTCCTCCCTCC---CGACCTCCAATCCCTCC----GAGTCAACTGACTGACTGAC----GATGGATC-
-----GGCACGGGCAGCACCACCGGCTGGTGACGATG------CCGCGGGAGGGGGAGGCGGCTTCCTCCTACGCGGGA-
-----GGGGGC---GTGGACGTGGTGGCGCGGGAGGCGGCGGCGCAGGCGCTGGGGGCGGTGGTGCAGCTGCACTTCGAC
AAGACGGTGGAGAAGAAGCGCAGCGCCGACGCGCAGAAGCAGGAGCTCTGGCGCCTCTTCCTCGCCTTCTTCCTCTTCCT
CGCGCTCGTCCTCTCCGCCGTCTCCGGCGGGGGCCGCCTCCAGTGCCGCCACCTCTGGGCCCCCGCGGGCCTCCTCTCCC
TCGCCCACCTCGCCTTCTACGCCGCCGTCGCGCACCACCTCCGATGCCTCAACGGCTTCAGGTCCTTG--------CCTC
TTTCTTTCTTTCTTTCTTTCTTGTGCTGCAACTACAATCGATTCCGATTTCCGATTCGATC----TGGTTGAGTAACAAT
GGATGGATGGTCCAATTGCAATATATAGGTACCAGCGGCGGTGCCACAAGCTGACGCTGGCGCTGGCGGCGGACCGGCTG
CGGATGCTCAAGTCGGCGGGGGAGGTGGTGGCGGCCGCCGACGTGGAGGTGCCCTACCAGGAGCCGCACGACACCTACCT
CGCCAAGTTCAAGCGCAGCTGGGCCATCCACTTCGCCTTCCTCATCGCCACCTTCGCCTTCTCCGTCGCCGCCGCCGTCG
CAGTCCTCTGCTTCTAGCCCTACCC-----------------------CTAGCCTAGCTACCACCATTAC------CTTC
TCCTCCTCCTCCTCCTCCTCCTCTCTGCTTCTTCTG-------TTCATCAGGATTACTAGTA----------GAATCGAA
TCGATTGTGCTGTGCTGTGTTCCACCATTAGCAAGCAAGCAGCACCCAGAAAC----AATGTCCTACAGACAGCAGCACC
AAGAGTGAGTGACATCTGTT--------TGC----CTGCCTACCAACATTCATTAATGTCAAGGATCTTCGTTGGC----
----CATGATTCTGACCAACTCTGCTTTGCTTTGCTTTCACTCTGGCC-GGCCTAATC----ATCAATTCATCATAACGC
AACTGTCCGTGTCAATCACATCGCATCACACATC----------------------------------------------
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------------------------------------------------TATAATTGTTGTACTATCTGAGATCTTCCTCT
ATCTAAAAT--GTGCACTACGCTAAGATAAGAATCACATCTCATCTGAGAGCAACACTGGAAAATACTAACAGGGGAGCT
TTCATCTCGCTGCTT----GTTGCATTCAGACAAGTTTATTTTGTTTCCCCTTTCAAAATCAA-----GAGATGAAATGA
AATAGCCATCATTTGTTGTTACAGCTTGCAATGGTAGT-AAATATGATTGTGCTGCTACATGTTACAACATAATCTCCTT
CCATCATGTTGGGAGCTTGGCTCTGTTGGCTCAAATATCTAGTTGAAGAAAACGAATACTCAAGAAAGGAACAAACAACA
GATGCG----GGAAAGAGAGCTCTAGCTCCA--------GTTCAGGAGCCCCAACTCCCCGCAAGAGAT-----GGAACG
ATTTTCTTGCCAAATTCACGCGCTCGAGTGAGGTC------------AGCTGATAGCGTTCTCAAGCTTCAGAACACCAC
GCGTGGAGGAAGGAAGAGGCTTATCACGCGGCCTTCAGGACGGTGCAGAGCGAGTTGTACGCATTGACGCACAGCTTGAA
CTTCTCCTCGGCTACGGCCTGTGCACAACACAAATGTAGGGAATGGACATGTCCTCTGTTAGCATATGTGTTTTCGCAAG
TTGACATGTGACCAACACTGAACTAGT
>chr2B_479
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------------------------------------------------------------------------------CG
TCCACTGTACACATGGATGGATGCATTCTCAGTGCTCAGAGTCACAGAG------------------------GAGAGAT
GGTTCACCACGTGCCATCCCATCCCATCCCATCTCTGCTACGCTG------CCCTTCCGTGGATCTTCTCTCCTCCGTGT
CCCTTTAATCTCCTCCGTCTACTGTAATATTCTGGAGTAATTACTGTACTTGACAACTACCTAAAATAAAAAA-TGAAAT
ACTCACCACGGT----------TGTTCACGCTCCAGTCCAGTGGAAGAAGCATCCAATGATCCAC-CATGGCCATGGACT
CTGTGTC---------------------------------------TGTCTGT--------GCCACTGCTCACTCCCCAC
CTTCAC--TTCACT---------------------------------GTCTCAGTCTCAGTA-CCGAGCTCCGGCCGCGA
GCAAGTAAAATACTCCTCCCTCC---C----TCCAATCCCTCCTCTGGAGTCAACTCACAGACACTAGCTAGATGGATCG
GCACGGGCACGGGCAGCAGCACCGGCTGGTGACGGTGACGATGCCGCGGGAGGGGGATGCGGCTTCCTCCTACGCGGGA-
-----GGGGGGACGGTGGACGTGGTGGCGCGGGAGGCGGCGGCGCAGGCGCTGGGGGCGGTGGTGCAGCTGCACTTCGAC
AAGACGGTGGAGAAGAAGCGCAGCGCCGACGCGCAGAAGCAGGAGCTCTGGCGCCTCTTCCTCGCCTTCTTCCTCTTCCT
CGCGCTCGTCCTCTCCTCCGTCGCCGGCGGGGGCCGCCTCCAGTGCCGCCACCTCTGGGCCCCCGCGGGGCTCCTCTCCC
TCGCCCACCTCGCCTTCTACGCCGCCGTCGCGCACCACCTCCGATGCCTCAACGGCTTCAGGTCCTTTGTTCATTCCTTC
CTTCTTTCTTGTG------------------CTACAATCGATTT-------CGATTCGATCTGGTTGGTTGAGTAACAAT
GAACTGCATAT---------G----TAGGTACCAGCGGCGGTGCCACAAGCTGACGCTGGCGCTGGCGGCGGACCGGCTG
CGGATGCTCAAGTCGGCGGGGGAGGTGGTGGCGGCCGCCGACGTGGAGGTGCCCTACCAGGAGCCACACGAGACCTACCT
CGCCAAGTTCAAGCGCAGCTGGGCCATCCACTTCGCCTTCCTCATCGCCACCTTCGCCTTCTCCGTCGCCGCCGCCGTCG
CAGTCCTCTGCTTCTAGCCCCACCCC-----------------TACCCCTAGCCTAGCTACCACCATTAC------CT--
----------CCTCCTCCTCCTCTCTGCTTCTTCTTCTTCTTCTTCTTCTTCAGGATTAGTA----------ACATCGCA
TCGAT-----TGTGCTGTGTTCCACCATTAGCAAGCAGCACC-----------AAAGAATGTCCTACAGCAGCACAA---
------GAGTGAGATCTGCT--------TGCTTGCCTGCCTGCCAACATTCATTAATGTCAAAGATCTTCGTTGGTGTCA
TGCTCATGATGGCGACCAACTCTGCTTTGCTTTCACT----------CTGGCCTAATCATCAATCAATTCATCATAACGC
AACTGTCCATCTCAATCACATCGCATCACACATGCACTAGCAGT------------------------------------
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-----------------------------------------CTAGCAGTATAA-TGTGCAACTATCTGAGATCTTATCTA
CTCAAAATGTAGTACACTACAGTAGGATAAGAATCACATCT-----AAGAG-------------TACTAACAAGGAAGCC
TTCATCTCGCTGCTTAATTGTTGCATTCAGACAAGTTCCTTTTATTCCCCCTGTCGAAACCAAGATACGAGATGAAATGA
AATAACCATCATT-GTTGTTACAGCTTGCAATGGTACGCAAATATGATTGTGCTTCTACATGTTACAACATAATCTCCTT
CCATGCTGTTGGGAGCTTGGCTCTGTTGGCTCAAATCTCTAGTGAAAGAAAATGAATACTGAAGAAAGGAACAAACAACA
GATGCG----GGGAAGAGAGCTCTAGTTCCA--------GTTCAGGAGCCCCAACTCCCTGCCAGAGATGGAACGGAACG
GTTTTCTTGCCAAATTCACGCGCTCGAGGGAGGT--------------GCTGATAGCGTTCACAGGCTTCAGAACACCAC
GCGTGGAG----GAAGAGGGTTATCACGCGGCCTTGAGGACGGCGCAGAGCGAGTTGTATGCATTGACGCACAGCTTGAA
CTTCTCCTCGGCTACAGCCTGTGCACAACACAAATGCAGGGAATGGACATGTCCTCTGTTAGCATATGTGTTTTCGCAAG
TTGATAGGTGACCAACACTGAACTAGT
>chr2D_555
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--------------------------------------------------------------------------AGAGAT
GGTTCACCACGTGCCA-CCCGTCCCATCCCATCCCTTCC---------CTTCCCTTCCGTGAATCTTCTCTCCTCCGT--
-------------------TAGTGTAATATTCTAATTAC--TACTGCACTTGACAGCTAGCTAAAGTAAAAAAATGGAAT
GCTCACCACGGT-CATTATGATTGTCCACGCTCCAGTCCAGCGCAAGAAGCATCCAATGATCCTC------------CCA
TGGCGTGAATAAAATAAAAAGCATCAACTTTATTACCTGCACTCTGTGTCTGT--------GCCACTGCTCACTCCCCAC
CTTCAC--TTCACCACTCCACTGTCCACTGCCCAGCTCCAATCT------------------CCCGAGCTCCGGCCGCGA
GCAAGTAAAATACTCCTCCCTCCCGAC----TCCACTCCCTCC----GAGTCAACTGACTGACTGAC----GATGGATCG
GCACGGGCACGGGCAGCACCACCGGCTGGTGACGATG------CCGCGGGAGGGGGAAC---CTTCATCCTACGCGGGGG
CCGGCGGGGGC---GTGGACGTGGTGGCGCGGGAGGCGGCGGCGCAGGCGCTGGGGGCGGTGGTGCAGCTGCACTTCGAC
AAGACGGTGGAGAAGAAGCGCAGCGCCGACGCGCAGAAGCAGGAGCTCTGGCGCCTCTTCCTCGCCTTCTTCCTCTTCCT
GGCGCTCGTCCTCTCCGCCGTCGCCGGCGGGGGCCGCCTCCAGTGCCGCCACCTCTGGGCCCCCGCGGGCCTCCTCTCCC
TCGCCCACCTCGCCTTCTACGCCGCCGTCGCGCACCACCTCCGCTGCCTCAACGGCTTCAGGTCCTTT--------CTTC
TTTCTTTCTTTTG------------------CTACAATCGATTT-------GGATTCGATC----TGGTTGAGTAACAAT
GAACTGCATATATATAATGAG----TAGGTACCAGCGGCGGTGCCACAAGCTGACACTGGCGCTGGCGGCGGACCGGCTG
CGGATGCTCAAGTCGGCGGGGGAGGTGGTGGCGGCCGCCGACGTGGAGGTGCCCTACCAGGAGCCGCACGAGACCTACCT
CGCCAAGTTCAAGCGCAGCTGGGCCATCCACTTCGCCTTCCTCATCGCCACCTTCGCCTTCTCCGTCGCCGCCGCCGTCG
CAGTCCTCTGCTTCTAGCCCTACCCCTACCCCTACCCCTAGCCTACCCCTAGCCTAGCTGCCACCATTACCTTCTTCT--
----------CCTCCTCCTCCTCTCTGCTTCTTCTG-------TTCATCAGGATTACTAGTAGAATCGAATCGAATCGAA
TCGATTGTGCTGTGCTGTGTTCCACCATTAGCAAGCAAGCAGCACCCAGAAAGAAAGAATGTCCTACAGACAGCAGCACC
AAGAGTGAGTGGGATCTGTTTGCTTGCCTGC----CTGCCTGCTAACATTCATTAATGTCAAGGATCTTCGTTGGC----
----CATGATTGTGACCAACTCTGCTTTGCTTTCACT----------C-GGCCTAATC----ATCAATTCATCATAACGC
AACTGTCCGTGTCAATCACATCGCATCACGTCCTTTTTACTCTGCACATTGGATTTACCGAAAGTCAAACTTTGCTAAGT
TTGACCAAATTTATATTAGAAATTATTAGCATCTATAATATCTAATAAATATAATATGAAAATATATTCTAAGATGAATC
TAATGATATTGGTGTTGTTATGTGAAAATGTCTATAATTTTTTATATAAACTTGGTCAAAGTTGGATGAGACTGACTTCA
AACAAACCTAATATCCAGAGTAAAAATGACCGGAGGGAGTACTAGCAGTATAATTGTGCTACTATCTGAGATCTTATCTA
CTCAAAATGTA---CACTACACTAGGATAAGAATCGCATCT-----GAGAGCAACACTGCAAAATACTAACGAGGAAGCT
TTCATCTCGCTGCTTAATTGTTGCATTCAGACAAGTTCCTTTTATTTCCCCTTTCGAAATCGA-----GAGATCAAATGA
AATAACCATCATTTGTTGTTACATCTTGGAACGGTAGT-AAATATGATTCTGCTTCTACATGTTACAACATAATCTCCTT
CCATGCTGTTGGGAGCTTGGCTCTGTTGGCTCAAATCTCTAGTGAAAGAAAACGAATACCCAAGAAAGGAACAAACAACA
GATGCATGCAGGGAAGAGAGCTCTAGCTCCTGAGCTTCCGTTCAGGAGCTCCAATTCCCAACAAGTGAT-----GGAACG
ATT-----------TTCACGCGCTCCAGGGAGGTCGGGAGACCGACGAGCGGATAGCGTTCACAAGCTTCAGAACACCAC
GCGTGGAG----GAAGAGGCTTATCACGCGGCCTTCAGGACGGTGCAGAGCGAGTTGTATGCATTGACGCACAGCTTGAA
CTTCTCCTCGGCTACGGCCTGTGAACAACACAAATGTAGGGAATGGACATGTCCTCTGTTAGAATATGTGTTCTCGCAAG
TTGATATGTGACCAACACTGAACTAGT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
--------------------------------------S------S---SSSSSSSSSSSSSSSSSSSSSSSS-------
-----------------S---------------------------SSS--S------S-------------S------S-
----------------S-------------------------------------------SS---SSSSS-SS-SS----
----S-------S-----------S----------------------------------------S--------------
------S-------------------S-----SSS-SSS-SS-SSSSSSSSSSSSSSSSSS-------------------
------SS-------------------------------S-SSSSSS---S-----------------------------
--S------------------------SSSS-------------------------------------------------
---------------------------------------------------------S----------------------
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----------------------S---------------------------------------------------------
-------------------------------------------------------------------S---------S--
-----------SSSSSSSSSSSSSSSSSSSS------------SSSSSSSS-----------------------------
-S-SS-SSSS-SS-SSSSS-SSSSS-------------------------------------------------------
-----------------------------------------------------------------------S--------
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------------------------------------------------------------------------------SS
SSSSSSSSSS----------------------------------------------------------------------
----------------------------------------------------S---------------------------
------------S----------------------------S--------------------------------------
-----------S---------------------SSS-SSSSSSSSSS---------------------------------
---------------------------------S----------------------------------------------
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---------------------------------------------------------SS----------------SSSSS
S--S---SS----S------S---S----------------SSSSS-------------S------------S--S----
-------------------------------------SS----S-----------S------------------------
----S-------------------------------------------------S-------------------------
----SS------------------------------S------SS-----------------------------------
------------S----------------------------------------------S--------------------
----------------------------S--------------------------------S------------------
--------SSSS-----------------------------------------------S--------------------
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----S----------------------
>forward_77
---------------------------------------------------------CTTGGCATTGATTCCTCGCG---
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>reverse_1847
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------TCCTCCTCCTCCTCCTCTCT------------------------------------------------------
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