Multiple sequence alignment - TraesCS2A01G538900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G538900 chr2A 100.000 2958 0 0 1 2958 751525265 751528222 0.000000e+00 5463.0
1 TraesCS2A01G538900 chr2A 95.575 565 21 3 2396 2958 626502462 626501900 0.000000e+00 902.0
2 TraesCS2A01G538900 chr2A 88.660 388 25 3 1994 2363 706758261 706757875 3.480000e-124 455.0
3 TraesCS2A01G538900 chr2A 87.000 100 9 2 1452 1549 751892992 751892895 3.120000e-20 110.0
4 TraesCS2A01G538900 chr2D 86.923 1040 61 39 38 1037 619961294 619962298 0.000000e+00 1098.0
5 TraesCS2A01G538900 chr2D 79.193 966 79 68 1093 1986 619962397 619963312 2.580000e-155 558.0
6 TraesCS2A01G538900 chr2D 84.010 419 47 6 1994 2394 83843058 83843474 4.620000e-103 385.0
7 TraesCS2A01G538900 chr2D 77.318 507 60 33 1091 1551 620005807 620006304 6.330000e-62 248.0
8 TraesCS2A01G538900 chr2D 85.149 202 12 10 38 233 620002443 620002632 1.080000e-44 191.0
9 TraesCS2A01G538900 chr2D 79.397 199 25 7 1376 1560 620160260 620160456 3.100000e-25 126.0
10 TraesCS2A01G538900 chr2D 85.714 98 14 0 1452 1549 620224402 620224499 1.450000e-18 104.0
11 TraesCS2A01G538900 chr2D 86.364 88 8 1 330 417 619504732 619504815 3.140000e-15 93.5
12 TraesCS2A01G538900 chr5A 96.290 566 18 3 2395 2958 589613274 589613838 0.000000e+00 926.0
13 TraesCS2A01G538900 chr5A 95.752 565 20 3 2396 2958 541698262 541697700 0.000000e+00 907.0
14 TraesCS2A01G538900 chr5A 89.573 422 25 4 1993 2396 42098203 42098623 4.370000e-143 518.0
15 TraesCS2A01G538900 chr5A 88.626 422 29 4 1993 2396 138171116 138171536 2.050000e-136 496.0
16 TraesCS2A01G538900 chr3A 96.113 566 19 3 2395 2958 685472057 685471493 0.000000e+00 920.0
17 TraesCS2A01G538900 chr3A 96.106 565 18 3 2396 2958 739036548 739035986 0.000000e+00 918.0
18 TraesCS2A01G538900 chr7A 95.767 567 20 3 2396 2958 98407851 98407285 0.000000e+00 911.0
19 TraesCS2A01G538900 chr7A 95.614 570 21 4 2391 2958 605614077 605613510 0.000000e+00 911.0
20 TraesCS2A01G538900 chr7A 95.591 567 21 3 2396 2958 98399794 98399228 0.000000e+00 905.0
21 TraesCS2A01G538900 chr7A 89.311 421 26 4 1994 2396 48481597 48482016 7.310000e-141 510.0
22 TraesCS2A01G538900 chr7A 88.028 426 29 11 1986 2393 637981511 637981090 4.430000e-133 484.0
23 TraesCS2A01G538900 chr4A 95.575 565 22 3 2396 2958 79582511 79581948 0.000000e+00 902.0
24 TraesCS2A01G538900 chrUn 85.630 682 40 22 428 1075 23306215 23306872 0.000000e+00 664.0
25 TraesCS2A01G538900 chrUn 86.230 443 20 17 1147 1551 23306952 23307391 2.710000e-120 442.0
26 TraesCS2A01G538900 chrUn 84.872 390 38 11 38 425 23305809 23306179 1.000000e-99 374.0
27 TraesCS2A01G538900 chrUn 74.316 950 134 59 1091 1958 23172446 23171525 4.790000e-78 302.0
28 TraesCS2A01G538900 chrUn 73.620 815 129 45 1091 1841 350649310 350650102 4.930000e-58 235.0
29 TraesCS2A01G538900 chrUn 97.333 75 2 0 159 233 23120736 23120662 8.610000e-26 128.0
30 TraesCS2A01G538900 chrUn 97.333 75 2 0 159 233 23129230 23129156 8.610000e-26 128.0
31 TraesCS2A01G538900 chrUn 97.333 75 2 0 159 233 23130278 23130204 8.610000e-26 128.0
32 TraesCS2A01G538900 chrUn 97.333 75 2 0 159 233 23131326 23131252 8.610000e-26 128.0
33 TraesCS2A01G538900 chrUn 97.333 75 2 0 159 233 23184351 23184277 8.610000e-26 128.0
34 TraesCS2A01G538900 chrUn 97.333 75 2 0 159 233 23343949 23344023 8.610000e-26 128.0
35 TraesCS2A01G538900 chrUn 85.088 114 12 3 38 146 23129559 23129446 8.670000e-21 111.0
36 TraesCS2A01G538900 chrUn 85.088 114 12 3 38 146 23130607 23130494 8.670000e-21 111.0
37 TraesCS2A01G538900 chrUn 85.088 114 12 3 38 146 23131655 23131542 8.670000e-21 111.0
38 TraesCS2A01G538900 chrUn 85.088 114 12 3 38 146 23184674 23184561 8.670000e-21 111.0
39 TraesCS2A01G538900 chrUn 85.088 114 12 3 38 146 23343620 23343733 8.670000e-21 111.0
40 TraesCS2A01G538900 chrUn 85.088 114 12 3 38 146 23344668 23344781 8.670000e-21 111.0
41 TraesCS2A01G538900 chrUn 85.088 114 12 3 38 146 431099700 431099813 8.670000e-21 111.0
42 TraesCS2A01G538900 chr6A 88.599 421 26 7 1995 2396 428691548 428691131 2.650000e-135 492.0
43 TraesCS2A01G538900 chr6A 88.180 423 30 5 1993 2396 597944272 597943851 1.230000e-133 486.0
44 TraesCS2A01G538900 chr6A 92.605 311 23 0 2086 2396 97031185 97030875 5.820000e-122 448.0
45 TraesCS2A01G538900 chr2B 87.000 100 9 2 1452 1549 760016136 760016233 3.120000e-20 110.0
46 TraesCS2A01G538900 chr2B 84.848 99 13 2 1452 1549 760119044 760119141 6.750000e-17 99.0
47 TraesCS2A01G538900 chr2B 90.141 71 2 4 350 419 759734825 759734891 1.460000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G538900 chr2A 751525265 751528222 2957 False 5463.000000 5463 100.000000 1 2958 1 chr2A.!!$F1 2957
1 TraesCS2A01G538900 chr2A 626501900 626502462 562 True 902.000000 902 95.575000 2396 2958 1 chr2A.!!$R1 562
2 TraesCS2A01G538900 chr2D 619961294 619963312 2018 False 828.000000 1098 83.058000 38 1986 2 chr2D.!!$F5 1948
3 TraesCS2A01G538900 chr2D 620002443 620006304 3861 False 219.500000 248 81.233500 38 1551 2 chr2D.!!$F6 1513
4 TraesCS2A01G538900 chr5A 589613274 589613838 564 False 926.000000 926 96.290000 2395 2958 1 chr5A.!!$F3 563
5 TraesCS2A01G538900 chr5A 541697700 541698262 562 True 907.000000 907 95.752000 2396 2958 1 chr5A.!!$R1 562
6 TraesCS2A01G538900 chr3A 685471493 685472057 564 True 920.000000 920 96.113000 2395 2958 1 chr3A.!!$R1 563
7 TraesCS2A01G538900 chr3A 739035986 739036548 562 True 918.000000 918 96.106000 2396 2958 1 chr3A.!!$R2 562
8 TraesCS2A01G538900 chr7A 98407285 98407851 566 True 911.000000 911 95.767000 2396 2958 1 chr7A.!!$R2 562
9 TraesCS2A01G538900 chr7A 605613510 605614077 567 True 911.000000 911 95.614000 2391 2958 1 chr7A.!!$R3 567
10 TraesCS2A01G538900 chr7A 98399228 98399794 566 True 905.000000 905 95.591000 2396 2958 1 chr7A.!!$R1 562
11 TraesCS2A01G538900 chr4A 79581948 79582511 563 True 902.000000 902 95.575000 2396 2958 1 chr4A.!!$R1 562
12 TraesCS2A01G538900 chrUn 23305809 23307391 1582 False 493.333333 664 85.577333 38 1551 3 chrUn.!!$F3 1513
13 TraesCS2A01G538900 chrUn 23171525 23172446 921 True 302.000000 302 74.316000 1091 1958 1 chrUn.!!$R2 867
14 TraesCS2A01G538900 chrUn 350649310 350650102 792 False 235.000000 235 73.620000 1091 1841 1 chrUn.!!$F1 750

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
154 163 1.204704 TGGACTAGAGCATGTGTTCCG 59.795 52.381 0.0 0.0 0.0 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2082 4663 0.107897 TGTATGGCCGTAGCACTTGG 60.108 55.0 4.44 0.0 42.56 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
152 161 3.118629 TCCATGGACTAGAGCATGTGTTC 60.119 47.826 11.44 0.00 0.00 3.18
154 163 1.204704 TGGACTAGAGCATGTGTTCCG 59.795 52.381 0.00 0.00 0.00 4.30
155 164 1.476891 GGACTAGAGCATGTGTTCCGA 59.523 52.381 0.00 0.00 0.00 4.55
251 260 5.105064 AGCTACACATCCCTAATTAACACGT 60.105 40.000 0.00 0.00 0.00 4.49
263 272 9.389570 CCCTAATTAACACGTTTGTTTAAGAAG 57.610 33.333 0.00 0.00 43.89 2.85
288 297 5.477984 TGCAAGCAACTCTTATTCATTTCCT 59.522 36.000 0.00 0.00 32.74 3.36
299 308 6.542370 TCTTATTCATTTCCTCACCCGAATTC 59.458 38.462 0.00 0.00 0.00 2.17
310 319 2.094675 ACCCGAATTCCAAATCTGCAG 58.905 47.619 7.63 7.63 0.00 4.41
333 354 2.669924 GGTTGTCCCTCGATACGTTTTC 59.330 50.000 0.00 0.00 0.00 2.29
378 2539 2.738139 TCACCGCATGCAGACGTG 60.738 61.111 19.57 16.62 35.78 4.49
516 2758 2.358737 AAACTTCAGGCGGCCGAG 60.359 61.111 33.48 19.92 0.00 4.63
667 2964 2.125793 GCCGGACAAGGGACGTAC 60.126 66.667 5.05 0.00 0.00 3.67
685 2982 5.238583 ACGTACTACTGGTCGTAACTACTT 58.761 41.667 0.00 0.00 32.88 2.24
686 2983 5.120830 ACGTACTACTGGTCGTAACTACTTG 59.879 44.000 0.00 0.00 32.88 3.16
711 3033 3.646715 AGCCTAGCCCAACGCCAA 61.647 61.111 0.00 0.00 38.78 4.52
784 3117 4.492160 GTCGCGATCGAGCCACCA 62.492 66.667 21.57 0.00 46.46 4.17
808 3141 3.003763 GACCCGCCCCAAGACTCT 61.004 66.667 0.00 0.00 0.00 3.24
833 3178 2.740826 CGGTCGTCGTGGCCATTT 60.741 61.111 9.72 0.00 0.00 2.32
928 3309 1.410932 CCACTGTCCCAAACTCCCAAA 60.411 52.381 0.00 0.00 0.00 3.28
999 3386 1.330655 CCGTCACTGGCTACTCCCAT 61.331 60.000 0.00 0.00 33.64 4.00
1012 3402 1.061812 ACTCCCATCCCATACAGCTCT 60.062 52.381 0.00 0.00 0.00 4.09
1017 3407 3.092301 CCATCCCATACAGCTCTATCGA 58.908 50.000 0.00 0.00 0.00 3.59
1018 3408 3.703556 CCATCCCATACAGCTCTATCGAT 59.296 47.826 2.16 2.16 0.00 3.59
1019 3409 4.202101 CCATCCCATACAGCTCTATCGATC 60.202 50.000 0.00 0.00 0.00 3.69
1020 3410 3.010420 TCCCATACAGCTCTATCGATCG 58.990 50.000 9.36 9.36 0.00 3.69
1021 3411 2.750166 CCCATACAGCTCTATCGATCGT 59.250 50.000 15.94 5.23 0.00 3.73
1022 3412 3.181505 CCCATACAGCTCTATCGATCGTC 60.182 52.174 15.94 0.00 0.00 4.20
1023 3413 3.484393 CCATACAGCTCTATCGATCGTCG 60.484 52.174 15.94 4.93 42.10 5.12
1024 3414 0.236187 ACAGCTCTATCGATCGTCGC 59.764 55.000 15.94 11.15 40.21 5.19
1025 3415 0.453615 CAGCTCTATCGATCGTCGCC 60.454 60.000 15.94 0.40 40.21 5.54
1026 3416 1.510204 GCTCTATCGATCGTCGCCG 60.510 63.158 15.94 3.73 40.21 6.46
1027 3417 1.132844 CTCTATCGATCGTCGCCGG 59.867 63.158 15.94 0.00 40.21 6.13
1028 3418 2.176055 CTATCGATCGTCGCCGGG 59.824 66.667 15.94 0.00 40.21 5.73
1029 3419 2.281002 TATCGATCGTCGCCGGGA 60.281 61.111 15.94 0.00 40.21 5.14
1030 3420 2.241885 CTATCGATCGTCGCCGGGAG 62.242 65.000 15.94 0.00 40.21 4.30
1031 3421 2.720358 TATCGATCGTCGCCGGGAGA 62.720 60.000 15.94 0.00 40.21 3.71
1071 3473 0.704076 TTCCATCCCACCCTTCCAAG 59.296 55.000 0.00 0.00 0.00 3.61
1075 3477 0.328258 ATCCCACCCTTCCAAGTTCG 59.672 55.000 0.00 0.00 0.00 3.95
1076 3478 1.303317 CCCACCCTTCCAAGTTCGG 60.303 63.158 0.00 0.00 0.00 4.30
1077 3479 1.758592 CCACCCTTCCAAGTTCGGA 59.241 57.895 0.00 0.00 0.00 4.55
1138 3588 1.808411 TTTTAACTGCGCCTCCTGAG 58.192 50.000 4.18 0.00 0.00 3.35
1151 3601 1.743958 CTCCTGAGGTACGTAGTGGTG 59.256 57.143 0.00 0.00 45.73 4.17
1224 3679 1.154150 GAACTGCAATGCGACAGGC 60.154 57.895 0.00 0.00 43.96 4.85
1247 3702 3.143675 GCAGAAGGCGATCAAGACA 57.856 52.632 0.00 0.00 0.00 3.41
1259 3714 3.192422 CGATCAAGACAGTCTCCACTCTT 59.808 47.826 2.72 0.00 0.00 2.85
1278 3733 8.827177 CACTCTTTGTGGTGACTTACTTATTA 57.173 34.615 0.00 0.00 42.68 0.98
1280 3735 8.648693 ACTCTTTGTGGTGACTTACTTATTACT 58.351 33.333 0.00 0.00 0.00 2.24
1286 3741 8.111545 TGTGGTGACTTACTTATTACTCTCCTA 58.888 37.037 0.00 0.00 0.00 2.94
1287 3742 8.404765 GTGGTGACTTACTTATTACTCTCCTAC 58.595 40.741 0.00 0.00 0.00 3.18
1303 3758 4.116238 CTCCTACTTTTCTCTGAATCCGC 58.884 47.826 0.00 0.00 0.00 5.54
1312 3767 2.515991 TGAATCCGCCCGGCATTC 60.516 61.111 10.77 12.29 34.68 2.67
1316 3800 3.774599 ATCCGCCCGGCATTCTTCC 62.775 63.158 10.77 0.00 34.68 3.46
1515 4016 0.175760 GCTTCTGCTCGGTGTGGATA 59.824 55.000 0.00 0.00 36.03 2.59
1545 4046 2.602676 CCCGGCCAAGGAGGAGAAA 61.603 63.158 2.24 0.00 41.22 2.52
1551 4052 3.435275 GGCCAAGGAGGAGAAAAAGAAT 58.565 45.455 0.00 0.00 41.22 2.40
1553 4054 3.194329 GCCAAGGAGGAGAAAAAGAATGG 59.806 47.826 0.00 0.00 41.22 3.16
1568 4069 2.433888 TGGCGACAATGAGGGCAA 59.566 55.556 0.00 0.00 37.44 4.52
1569 4070 1.001020 TGGCGACAATGAGGGCAAT 60.001 52.632 0.00 0.00 37.44 3.56
1573 4077 2.288666 GCGACAATGAGGGCAATAAGA 58.711 47.619 0.00 0.00 0.00 2.10
1574 4078 2.032178 GCGACAATGAGGGCAATAAGAC 59.968 50.000 0.00 0.00 0.00 3.01
1578 4082 3.117888 ACAATGAGGGCAATAAGACGGAT 60.118 43.478 0.00 0.00 0.00 4.18
1580 4084 1.837439 TGAGGGCAATAAGACGGATGT 59.163 47.619 0.00 0.00 0.00 3.06
1581 4085 2.158957 TGAGGGCAATAAGACGGATGTC 60.159 50.000 0.00 0.00 45.86 3.06
1595 4099 2.996621 CGGATGTCAACAAGGAGAAGAC 59.003 50.000 0.00 0.00 0.00 3.01
1597 4101 3.306088 GGATGTCAACAAGGAGAAGACGA 60.306 47.826 0.00 0.00 32.08 4.20
1603 4107 0.319555 CAAGGAGAAGACGAACGGCA 60.320 55.000 2.25 0.00 0.00 5.69
1622 4132 4.430765 CGGGGACAAGACGGACGG 62.431 72.222 0.00 0.00 0.00 4.79
1702 4227 3.299524 TACCCGCAGCCGTGTTACC 62.300 63.158 0.00 0.00 0.00 2.85
1731 4262 3.775654 GAGGAGCACCCCCACGAG 61.776 72.222 0.00 0.00 36.73 4.18
1732 4263 4.640690 AGGAGCACCCCCACGAGT 62.641 66.667 0.00 0.00 36.73 4.18
1767 4298 3.105937 CTGCTGATCGATGCACATTTTG 58.894 45.455 0.54 0.00 35.20 2.44
1768 4299 2.488937 TGCTGATCGATGCACATTTTGT 59.511 40.909 0.54 0.00 33.94 2.83
1769 4300 3.688673 TGCTGATCGATGCACATTTTGTA 59.311 39.130 0.54 0.00 33.94 2.41
1770 4301 4.201841 TGCTGATCGATGCACATTTTGTAG 60.202 41.667 0.54 0.00 33.94 2.74
1771 4302 4.277257 TGATCGATGCACATTTTGTAGC 57.723 40.909 0.54 0.00 0.00 3.58
1773 4304 2.431454 TCGATGCACATTTTGTAGCCA 58.569 42.857 0.00 0.00 0.00 4.75
1775 4306 2.533266 GATGCACATTTTGTAGCCAGC 58.467 47.619 0.00 0.00 0.00 4.85
1780 4342 2.164219 CACATTTTGTAGCCAGCCGATT 59.836 45.455 0.00 0.00 0.00 3.34
1801 4363 1.543802 GATCGGGACTCATCAGCCTAG 59.456 57.143 0.00 0.00 0.00 3.02
1833 4395 2.565394 CGACGGCGTGCGTTCTATC 61.565 63.158 21.19 0.00 0.00 2.08
1842 4404 4.099120 GCGTGCGTTCTATCTATCTATGG 58.901 47.826 0.00 0.00 0.00 2.74
1853 4425 1.615883 CTATCTATGGCCGTGTGAGCT 59.384 52.381 8.05 0.00 0.00 4.09
1854 4426 1.704641 ATCTATGGCCGTGTGAGCTA 58.295 50.000 8.05 0.00 0.00 3.32
1855 4427 1.032794 TCTATGGCCGTGTGAGCTAG 58.967 55.000 8.05 0.00 0.00 3.42
1873 4445 6.321945 TGAGCTAGTACATATTTTACCGGTGA 59.678 38.462 19.93 6.00 0.00 4.02
1907 4484 0.327259 ATCTGCTGAGCTTTGCCAGA 59.673 50.000 5.83 0.00 31.74 3.86
1908 4485 0.327259 TCTGCTGAGCTTTGCCAGAT 59.673 50.000 5.83 0.00 31.74 2.90
1917 4494 3.467803 AGCTTTGCCAGATATACGGAAC 58.532 45.455 0.00 0.00 0.00 3.62
1944 4525 8.379457 ACAGTGTGGAGAAGAACTAAATAAAC 57.621 34.615 0.00 0.00 0.00 2.01
1962 4543 2.243602 ACAAAACTGCTGCATTTGGG 57.756 45.000 24.44 14.55 38.14 4.12
1972 4553 3.135530 TGCTGCATTTGGGTTTTAAAGGT 59.864 39.130 0.00 0.00 0.00 3.50
1974 4555 4.742138 GCTGCATTTGGGTTTTAAAGGTCA 60.742 41.667 0.00 0.00 0.00 4.02
1977 4558 5.994668 TGCATTTGGGTTTTAAAGGTCATTC 59.005 36.000 0.00 0.00 0.00 2.67
1986 4567 8.513774 GGGTTTTAAAGGTCATTCGTTATTACA 58.486 33.333 0.00 0.00 0.00 2.41
1990 4571 8.795842 TTAAAGGTCATTCGTTATTACATGGT 57.204 30.769 0.00 0.00 0.00 3.55
1991 4572 6.920569 AAGGTCATTCGTTATTACATGGTC 57.079 37.500 0.00 0.00 0.00 4.02
1992 4573 5.365619 AGGTCATTCGTTATTACATGGTCC 58.634 41.667 0.00 0.00 0.00 4.46
1993 4574 5.130477 AGGTCATTCGTTATTACATGGTCCT 59.870 40.000 0.00 0.00 0.00 3.85
1994 4575 5.820947 GGTCATTCGTTATTACATGGTCCTT 59.179 40.000 0.00 0.00 0.00 3.36
1995 4576 6.317893 GGTCATTCGTTATTACATGGTCCTTT 59.682 38.462 0.00 0.00 0.00 3.11
1996 4577 7.148137 GGTCATTCGTTATTACATGGTCCTTTT 60.148 37.037 0.00 0.00 0.00 2.27
1997 4578 8.241367 GTCATTCGTTATTACATGGTCCTTTTT 58.759 33.333 0.00 0.00 0.00 1.94
2016 4597 2.649531 TTTTGCGGGAGAAAAGGAGA 57.350 45.000 0.00 0.00 38.91 3.71
2017 4598 2.879103 TTTGCGGGAGAAAAGGAGAT 57.121 45.000 0.00 0.00 30.81 2.75
2018 4599 2.879103 TTGCGGGAGAAAAGGAGATT 57.121 45.000 0.00 0.00 0.00 2.40
2019 4600 2.403252 TGCGGGAGAAAAGGAGATTC 57.597 50.000 0.00 0.00 0.00 2.52
2020 4601 1.909302 TGCGGGAGAAAAGGAGATTCT 59.091 47.619 0.00 0.00 39.76 2.40
2031 4612 8.934507 AGAAAAGGAGATTCTCATTACTTACG 57.065 34.615 13.48 0.00 33.23 3.18
2032 4613 7.982354 AGAAAAGGAGATTCTCATTACTTACGG 59.018 37.037 13.48 0.00 33.23 4.02
2033 4614 7.419711 AAAGGAGATTCTCATTACTTACGGA 57.580 36.000 13.48 0.00 33.23 4.69
2034 4615 6.642707 AGGAGATTCTCATTACTTACGGAG 57.357 41.667 15.36 0.00 31.08 4.63
2035 4616 5.536916 AGGAGATTCTCATTACTTACGGAGG 59.463 44.000 15.36 0.00 31.08 4.30
2036 4617 5.203060 AGATTCTCATTACTTACGGAGGC 57.797 43.478 0.00 0.00 0.00 4.70
2037 4618 4.896482 AGATTCTCATTACTTACGGAGGCT 59.104 41.667 0.00 0.00 0.00 4.58
2038 4619 5.364157 AGATTCTCATTACTTACGGAGGCTT 59.636 40.000 0.00 0.00 0.00 4.35
2039 4620 5.416271 TTCTCATTACTTACGGAGGCTTT 57.584 39.130 0.00 0.00 0.00 3.51
2040 4621 5.416271 TCTCATTACTTACGGAGGCTTTT 57.584 39.130 0.00 0.00 0.00 2.27
2041 4622 5.416947 TCTCATTACTTACGGAGGCTTTTC 58.583 41.667 0.00 0.00 0.00 2.29
2042 4623 5.046878 TCTCATTACTTACGGAGGCTTTTCA 60.047 40.000 0.00 0.00 0.00 2.69
2043 4624 5.175859 TCATTACTTACGGAGGCTTTTCAG 58.824 41.667 0.00 0.00 0.00 3.02
2044 4625 1.809684 ACTTACGGAGGCTTTTCAGC 58.190 50.000 0.00 0.00 46.52 4.26
2053 4634 3.610637 GCTTTTCAGCCAATGCCAA 57.389 47.368 0.00 0.00 40.61 4.52
2054 4635 1.435577 GCTTTTCAGCCAATGCCAAG 58.564 50.000 0.00 0.00 40.61 3.61
2055 4636 1.270465 GCTTTTCAGCCAATGCCAAGT 60.270 47.619 0.00 0.00 40.61 3.16
2056 4637 2.807837 GCTTTTCAGCCAATGCCAAGTT 60.808 45.455 0.00 0.00 40.61 2.66
2057 4638 3.469739 CTTTTCAGCCAATGCCAAGTTT 58.530 40.909 0.00 0.00 38.69 2.66
2058 4639 4.630111 CTTTTCAGCCAATGCCAAGTTTA 58.370 39.130 0.00 0.00 38.69 2.01
2059 4640 3.658757 TTCAGCCAATGCCAAGTTTAC 57.341 42.857 0.00 0.00 38.69 2.01
2060 4641 1.539388 TCAGCCAATGCCAAGTTTACG 59.461 47.619 0.00 0.00 38.69 3.18
2061 4642 1.539388 CAGCCAATGCCAAGTTTACGA 59.461 47.619 0.00 0.00 38.69 3.43
2062 4643 2.030363 CAGCCAATGCCAAGTTTACGAA 60.030 45.455 0.00 0.00 38.69 3.85
2063 4644 2.625790 AGCCAATGCCAAGTTTACGAAA 59.374 40.909 0.00 0.00 38.69 3.46
2064 4645 3.068873 AGCCAATGCCAAGTTTACGAAAA 59.931 39.130 0.00 0.00 38.69 2.29
2065 4646 3.804873 GCCAATGCCAAGTTTACGAAAAA 59.195 39.130 0.00 0.00 0.00 1.94
2085 4666 5.930837 AAAAATCTAATCCCGAATGCCAA 57.069 34.783 0.00 0.00 0.00 4.52
2086 4667 5.520376 AAAATCTAATCCCGAATGCCAAG 57.480 39.130 0.00 0.00 0.00 3.61
2087 4668 3.864789 ATCTAATCCCGAATGCCAAGT 57.135 42.857 0.00 0.00 0.00 3.16
2088 4669 2.917933 TCTAATCCCGAATGCCAAGTG 58.082 47.619 0.00 0.00 0.00 3.16
2089 4670 1.334869 CTAATCCCGAATGCCAAGTGC 59.665 52.381 0.00 0.00 41.77 4.40
2090 4671 0.323725 AATCCCGAATGCCAAGTGCT 60.324 50.000 0.00 0.00 42.00 4.40
2091 4672 0.546122 ATCCCGAATGCCAAGTGCTA 59.454 50.000 0.00 0.00 42.00 3.49
2092 4673 0.392461 TCCCGAATGCCAAGTGCTAC 60.392 55.000 0.00 0.00 42.00 3.58
2093 4674 1.705337 CCCGAATGCCAAGTGCTACG 61.705 60.000 0.00 0.00 42.00 3.51
2094 4675 1.705337 CCGAATGCCAAGTGCTACGG 61.705 60.000 0.00 0.00 41.17 4.02
2095 4676 1.429423 GAATGCCAAGTGCTACGGC 59.571 57.895 5.82 5.82 46.43 5.68
2096 4677 1.993369 GAATGCCAAGTGCTACGGCC 61.993 60.000 0.00 0.00 45.63 6.13
2097 4678 2.762969 AATGCCAAGTGCTACGGCCA 62.763 55.000 2.24 0.00 45.63 5.36
2098 4679 2.438434 GCCAAGTGCTACGGCCAT 60.438 61.111 2.24 0.00 40.07 4.40
2099 4680 1.153249 GCCAAGTGCTACGGCCATA 60.153 57.895 2.24 0.00 40.07 2.74
2100 4681 1.436983 GCCAAGTGCTACGGCCATAC 61.437 60.000 2.24 0.00 40.07 2.39
2101 4682 0.107897 CCAAGTGCTACGGCCATACA 60.108 55.000 2.24 0.00 37.74 2.29
2102 4683 1.006832 CAAGTGCTACGGCCATACAC 58.993 55.000 2.24 5.24 37.74 2.90
2103 4684 0.459585 AAGTGCTACGGCCATACACG 60.460 55.000 2.24 0.00 36.38 4.49
2104 4685 1.881252 GTGCTACGGCCATACACGG 60.881 63.158 2.24 0.00 37.74 4.94
2114 4695 2.830772 CCATACACGGCAAGTTCATG 57.169 50.000 0.00 0.00 0.00 3.07
2115 4696 2.355197 CCATACACGGCAAGTTCATGA 58.645 47.619 0.00 0.00 0.00 3.07
2116 4697 2.095853 CCATACACGGCAAGTTCATGAC 59.904 50.000 0.00 0.00 0.00 3.06
2117 4698 2.831685 TACACGGCAAGTTCATGACT 57.168 45.000 0.00 0.00 41.47 3.41
2118 4699 2.831685 ACACGGCAAGTTCATGACTA 57.168 45.000 0.00 0.00 37.72 2.59
2119 4700 3.120321 ACACGGCAAGTTCATGACTAA 57.880 42.857 0.00 0.00 37.72 2.24
2120 4701 2.806244 ACACGGCAAGTTCATGACTAAC 59.194 45.455 0.00 0.00 37.72 2.34
2121 4702 3.067106 CACGGCAAGTTCATGACTAACT 58.933 45.455 0.00 0.00 37.72 2.24
2122 4703 3.498397 CACGGCAAGTTCATGACTAACTT 59.502 43.478 5.60 5.60 45.64 2.66
2123 4704 4.024048 CACGGCAAGTTCATGACTAACTTT 60.024 41.667 8.28 0.00 42.97 2.66
2124 4705 5.178623 CACGGCAAGTTCATGACTAACTTTA 59.821 40.000 8.28 0.00 42.97 1.85
2125 4706 5.938125 ACGGCAAGTTCATGACTAACTTTAT 59.062 36.000 8.28 0.00 42.97 1.40
2126 4707 6.430000 ACGGCAAGTTCATGACTAACTTTATT 59.570 34.615 8.28 0.00 42.97 1.40
2127 4708 6.961554 CGGCAAGTTCATGACTAACTTTATTC 59.038 38.462 8.28 0.67 42.97 1.75
2128 4709 7.148407 CGGCAAGTTCATGACTAACTTTATTCT 60.148 37.037 8.28 0.00 42.97 2.40
2129 4710 7.965107 GGCAAGTTCATGACTAACTTTATTCTG 59.035 37.037 8.28 0.16 42.97 3.02
2130 4711 7.483059 GCAAGTTCATGACTAACTTTATTCTGC 59.517 37.037 8.28 5.71 42.97 4.26
2131 4712 7.295952 AGTTCATGACTAACTTTATTCTGCG 57.704 36.000 0.00 0.00 36.65 5.18
2132 4713 7.097192 AGTTCATGACTAACTTTATTCTGCGA 58.903 34.615 0.00 0.00 36.65 5.10
2133 4714 6.887376 TCATGACTAACTTTATTCTGCGAC 57.113 37.500 0.00 0.00 0.00 5.19
2134 4715 5.810587 TCATGACTAACTTTATTCTGCGACC 59.189 40.000 0.00 0.00 0.00 4.79
2135 4716 4.171005 TGACTAACTTTATTCTGCGACCG 58.829 43.478 0.00 0.00 0.00 4.79
2136 4717 4.082625 TGACTAACTTTATTCTGCGACCGA 60.083 41.667 0.00 0.00 0.00 4.69
2137 4718 4.171754 ACTAACTTTATTCTGCGACCGAC 58.828 43.478 0.00 0.00 0.00 4.79
2138 4719 2.736144 ACTTTATTCTGCGACCGACA 57.264 45.000 0.00 0.00 0.00 4.35
2139 4720 3.034721 ACTTTATTCTGCGACCGACAA 57.965 42.857 0.00 0.00 0.00 3.18
2140 4721 2.735134 ACTTTATTCTGCGACCGACAAC 59.265 45.455 0.00 0.00 0.00 3.32
2141 4722 2.442212 TTATTCTGCGACCGACAACA 57.558 45.000 0.00 0.00 0.00 3.33
2142 4723 2.442212 TATTCTGCGACCGACAACAA 57.558 45.000 0.00 0.00 0.00 2.83
2143 4724 0.865769 ATTCTGCGACCGACAACAAC 59.134 50.000 0.00 0.00 0.00 3.32
2144 4725 1.484227 TTCTGCGACCGACAACAACG 61.484 55.000 0.00 0.00 0.00 4.10
2145 4726 1.947146 CTGCGACCGACAACAACGA 60.947 57.895 0.00 0.00 0.00 3.85
2146 4727 1.876453 CTGCGACCGACAACAACGAG 61.876 60.000 0.00 0.00 0.00 4.18
2147 4728 1.947642 GCGACCGACAACAACGAGT 60.948 57.895 0.00 0.00 0.00 4.18
2148 4729 0.661187 GCGACCGACAACAACGAGTA 60.661 55.000 0.00 0.00 0.00 2.59
2149 4730 1.757574 CGACCGACAACAACGAGTAA 58.242 50.000 0.00 0.00 0.00 2.24
2150 4731 2.118683 CGACCGACAACAACGAGTAAA 58.881 47.619 0.00 0.00 0.00 2.01
2151 4732 2.535166 CGACCGACAACAACGAGTAAAA 59.465 45.455 0.00 0.00 0.00 1.52
2152 4733 3.361339 CGACCGACAACAACGAGTAAAAG 60.361 47.826 0.00 0.00 0.00 2.27
2153 4734 3.784338 ACCGACAACAACGAGTAAAAGA 58.216 40.909 0.00 0.00 0.00 2.52
2154 4735 4.183101 ACCGACAACAACGAGTAAAAGAA 58.817 39.130 0.00 0.00 0.00 2.52
2155 4736 4.630940 ACCGACAACAACGAGTAAAAGAAA 59.369 37.500 0.00 0.00 0.00 2.52
2156 4737 5.295045 ACCGACAACAACGAGTAAAAGAAAT 59.705 36.000 0.00 0.00 0.00 2.17
2157 4738 5.844396 CCGACAACAACGAGTAAAAGAAATC 59.156 40.000 0.00 0.00 0.00 2.17
2158 4739 6.292703 CCGACAACAACGAGTAAAAGAAATCT 60.293 38.462 0.00 0.00 0.00 2.40
2159 4740 6.786103 CGACAACAACGAGTAAAAGAAATCTC 59.214 38.462 0.00 0.00 0.00 2.75
2160 4741 6.956047 ACAACAACGAGTAAAAGAAATCTCC 58.044 36.000 0.00 0.00 0.00 3.71
2161 4742 6.017357 ACAACAACGAGTAAAAGAAATCTCCC 60.017 38.462 0.00 0.00 0.00 4.30
2162 4743 5.866207 ACAACGAGTAAAAGAAATCTCCCT 58.134 37.500 0.00 0.00 0.00 4.20
2163 4744 7.001099 ACAACGAGTAAAAGAAATCTCCCTA 57.999 36.000 0.00 0.00 0.00 3.53
2164 4745 7.621796 ACAACGAGTAAAAGAAATCTCCCTAT 58.378 34.615 0.00 0.00 0.00 2.57
2165 4746 7.764901 ACAACGAGTAAAAGAAATCTCCCTATC 59.235 37.037 0.00 0.00 0.00 2.08
2166 4747 6.818233 ACGAGTAAAAGAAATCTCCCTATCC 58.182 40.000 0.00 0.00 0.00 2.59
2167 4748 6.183360 ACGAGTAAAAGAAATCTCCCTATCCC 60.183 42.308 0.00 0.00 0.00 3.85
2168 4749 6.517013 AGTAAAAGAAATCTCCCTATCCCC 57.483 41.667 0.00 0.00 0.00 4.81
2169 4750 5.976870 AGTAAAAGAAATCTCCCTATCCCCA 59.023 40.000 0.00 0.00 0.00 4.96
2170 4751 5.394562 AAAAGAAATCTCCCTATCCCCAG 57.605 43.478 0.00 0.00 0.00 4.45
2171 4752 3.734344 AGAAATCTCCCTATCCCCAGT 57.266 47.619 0.00 0.00 0.00 4.00
2172 4753 4.027782 AGAAATCTCCCTATCCCCAGTT 57.972 45.455 0.00 0.00 0.00 3.16
2173 4754 3.718956 AGAAATCTCCCTATCCCCAGTTG 59.281 47.826 0.00 0.00 0.00 3.16
2174 4755 3.438131 AATCTCCCTATCCCCAGTTGA 57.562 47.619 0.00 0.00 0.00 3.18
2175 4756 2.478872 TCTCCCTATCCCCAGTTGAG 57.521 55.000 0.00 0.00 0.00 3.02
2176 4757 1.062121 TCTCCCTATCCCCAGTTGAGG 60.062 57.143 0.00 0.00 0.00 3.86
2177 4758 0.694444 TCCCTATCCCCAGTTGAGGC 60.694 60.000 0.00 0.00 0.00 4.70
2178 4759 1.709994 CCCTATCCCCAGTTGAGGCC 61.710 65.000 0.00 0.00 0.00 5.19
2179 4760 0.988145 CCTATCCCCAGTTGAGGCCA 60.988 60.000 5.01 0.00 0.00 5.36
2180 4761 0.471617 CTATCCCCAGTTGAGGCCAG 59.528 60.000 5.01 0.00 0.00 4.85
2181 4762 0.044092 TATCCCCAGTTGAGGCCAGA 59.956 55.000 5.01 0.00 0.00 3.86
2182 4763 0.625683 ATCCCCAGTTGAGGCCAGAT 60.626 55.000 5.01 0.00 0.00 2.90
2183 4764 0.846427 TCCCCAGTTGAGGCCAGATT 60.846 55.000 5.01 0.00 0.00 2.40
2184 4765 0.394899 CCCCAGTTGAGGCCAGATTC 60.395 60.000 5.01 0.00 0.00 2.52
2185 4766 0.394899 CCCAGTTGAGGCCAGATTCC 60.395 60.000 5.01 0.00 0.00 3.01
2186 4767 0.745845 CCAGTTGAGGCCAGATTCCG 60.746 60.000 5.01 0.00 0.00 4.30
2187 4768 0.250234 CAGTTGAGGCCAGATTCCGA 59.750 55.000 5.01 0.00 0.00 4.55
2188 4769 0.984230 AGTTGAGGCCAGATTCCGAA 59.016 50.000 5.01 0.00 0.00 4.30
2189 4770 1.561542 AGTTGAGGCCAGATTCCGAAT 59.438 47.619 5.01 0.00 0.00 3.34
2190 4771 1.943340 GTTGAGGCCAGATTCCGAATC 59.057 52.381 12.51 12.51 38.20 2.52
2192 4773 1.414181 TGAGGCCAGATTCCGAATCTC 59.586 52.381 18.97 10.18 46.20 2.75
2193 4774 0.761802 AGGCCAGATTCCGAATCTCC 59.238 55.000 18.97 17.43 46.20 3.71
2194 4775 0.761802 GGCCAGATTCCGAATCTCCT 59.238 55.000 18.97 0.00 46.20 3.69
2195 4776 1.141858 GGCCAGATTCCGAATCTCCTT 59.858 52.381 18.97 0.00 46.20 3.36
2196 4777 2.368875 GGCCAGATTCCGAATCTCCTTA 59.631 50.000 18.97 0.00 46.20 2.69
2197 4778 3.181454 GGCCAGATTCCGAATCTCCTTAA 60.181 47.826 18.97 0.00 46.20 1.85
2198 4779 3.810386 GCCAGATTCCGAATCTCCTTAAC 59.190 47.826 18.97 3.98 46.20 2.01
2199 4780 4.381411 CCAGATTCCGAATCTCCTTAACC 58.619 47.826 18.97 0.00 46.20 2.85
2200 4781 4.141711 CCAGATTCCGAATCTCCTTAACCA 60.142 45.833 18.97 0.00 46.20 3.67
2201 4782 5.428253 CAGATTCCGAATCTCCTTAACCAA 58.572 41.667 18.97 0.00 46.20 3.67
2202 4783 5.294552 CAGATTCCGAATCTCCTTAACCAAC 59.705 44.000 18.97 0.00 46.20 3.77
2203 4784 4.627284 TTCCGAATCTCCTTAACCAACA 57.373 40.909 0.00 0.00 0.00 3.33
2204 4785 4.837093 TCCGAATCTCCTTAACCAACAT 57.163 40.909 0.00 0.00 0.00 2.71
2205 4786 4.513442 TCCGAATCTCCTTAACCAACATG 58.487 43.478 0.00 0.00 0.00 3.21
2206 4787 4.019681 TCCGAATCTCCTTAACCAACATGT 60.020 41.667 0.00 0.00 0.00 3.21
2207 4788 4.094887 CCGAATCTCCTTAACCAACATGTG 59.905 45.833 0.00 0.00 0.00 3.21
2208 4789 4.935205 CGAATCTCCTTAACCAACATGTGA 59.065 41.667 0.00 0.00 0.00 3.58
2209 4790 5.586243 CGAATCTCCTTAACCAACATGTGAT 59.414 40.000 0.00 0.00 0.00 3.06
2210 4791 6.457392 CGAATCTCCTTAACCAACATGTGATG 60.457 42.308 0.00 0.00 0.00 3.07
2212 4793 6.367374 TCTCCTTAACCAACATGTGATGTA 57.633 37.500 0.00 0.00 44.07 2.29
2213 4794 6.957631 TCTCCTTAACCAACATGTGATGTAT 58.042 36.000 0.00 0.00 44.07 2.29
2214 4795 7.047891 TCTCCTTAACCAACATGTGATGTATC 58.952 38.462 0.00 0.00 44.07 2.24
2215 4796 5.815222 TCCTTAACCAACATGTGATGTATCG 59.185 40.000 0.00 0.00 44.07 2.92
2216 4797 5.815222 CCTTAACCAACATGTGATGTATCGA 59.185 40.000 0.00 0.00 44.07 3.59
2217 4798 6.483307 CCTTAACCAACATGTGATGTATCGAT 59.517 38.462 2.16 2.16 44.07 3.59
2218 4799 5.991328 AACCAACATGTGATGTATCGATC 57.009 39.130 0.00 0.00 44.07 3.69
2219 4800 4.051237 ACCAACATGTGATGTATCGATCG 58.949 43.478 9.36 9.36 44.07 3.69
2220 4801 4.202111 ACCAACATGTGATGTATCGATCGA 60.202 41.667 21.86 21.86 44.07 3.59
2221 4802 4.925646 CCAACATGTGATGTATCGATCGAT 59.074 41.667 31.39 31.39 44.07 3.59
2222 4803 5.061435 CCAACATGTGATGTATCGATCGATC 59.939 44.000 32.50 22.84 44.07 3.69
2223 4804 4.738124 ACATGTGATGTATCGATCGATCC 58.262 43.478 32.50 22.80 42.78 3.36
2224 4805 4.460731 ACATGTGATGTATCGATCGATCCT 59.539 41.667 32.50 18.47 42.78 3.24
2225 4806 4.686839 TGTGATGTATCGATCGATCCTC 57.313 45.455 32.50 24.71 36.17 3.71
2226 4807 3.125316 TGTGATGTATCGATCGATCCTCG 59.875 47.826 32.50 10.18 42.10 4.63
2227 4808 2.678336 TGATGTATCGATCGATCCTCGG 59.322 50.000 32.50 5.79 40.88 4.63
2228 4809 2.467566 TGTATCGATCGATCCTCGGA 57.532 50.000 32.50 12.74 40.88 4.55
2229 4810 2.347731 TGTATCGATCGATCCTCGGAG 58.652 52.381 32.50 4.69 40.88 4.63
2230 4811 2.289506 TGTATCGATCGATCCTCGGAGT 60.290 50.000 32.50 10.49 40.88 3.85
2231 4812 1.160989 ATCGATCGATCCTCGGAGTG 58.839 55.000 24.60 3.23 40.88 3.51
2232 4813 0.179054 TCGATCGATCCTCGGAGTGT 60.179 55.000 19.51 0.00 40.88 3.55
2233 4814 0.040870 CGATCGATCCTCGGAGTGTG 60.041 60.000 19.51 0.00 40.88 3.82
2234 4815 1.025812 GATCGATCCTCGGAGTGTGT 58.974 55.000 14.76 0.00 40.88 3.72
2235 4816 1.405821 GATCGATCCTCGGAGTGTGTT 59.594 52.381 14.76 0.00 40.88 3.32
2236 4817 0.526211 TCGATCCTCGGAGTGTGTTG 59.474 55.000 4.02 0.00 40.88 3.33
2237 4818 0.243907 CGATCCTCGGAGTGTGTTGT 59.756 55.000 4.02 0.00 36.00 3.32
2238 4819 1.714794 GATCCTCGGAGTGTGTTGTG 58.285 55.000 4.02 0.00 0.00 3.33
2239 4820 1.272490 GATCCTCGGAGTGTGTTGTGA 59.728 52.381 4.02 0.00 0.00 3.58
2240 4821 1.338107 TCCTCGGAGTGTGTTGTGAT 58.662 50.000 4.02 0.00 0.00 3.06
2241 4822 1.272490 TCCTCGGAGTGTGTTGTGATC 59.728 52.381 4.02 0.00 0.00 2.92
2242 4823 1.000843 CCTCGGAGTGTGTTGTGATCA 59.999 52.381 4.02 0.00 0.00 2.92
2243 4824 2.332104 CTCGGAGTGTGTTGTGATCAG 58.668 52.381 0.00 0.00 0.00 2.90
2244 4825 1.686587 TCGGAGTGTGTTGTGATCAGT 59.313 47.619 0.00 0.00 0.00 3.41
2245 4826 1.794701 CGGAGTGTGTTGTGATCAGTG 59.205 52.381 0.00 0.00 0.00 3.66
2246 4827 2.545742 CGGAGTGTGTTGTGATCAGTGA 60.546 50.000 0.00 0.00 0.00 3.41
2247 4828 3.668447 GGAGTGTGTTGTGATCAGTGAT 58.332 45.455 4.98 4.98 0.00 3.06
2248 4829 4.618227 CGGAGTGTGTTGTGATCAGTGATA 60.618 45.833 5.38 0.00 0.00 2.15
2249 4830 4.627467 GGAGTGTGTTGTGATCAGTGATAC 59.373 45.833 5.38 1.02 0.00 2.24
2250 4831 4.569943 AGTGTGTTGTGATCAGTGATACC 58.430 43.478 5.38 0.00 0.00 2.73
2251 4832 3.367932 GTGTGTTGTGATCAGTGATACCG 59.632 47.826 5.38 0.00 0.00 4.02
2252 4833 2.348666 GTGTTGTGATCAGTGATACCGC 59.651 50.000 5.38 2.01 0.00 5.68
2253 4834 1.933853 GTTGTGATCAGTGATACCGCC 59.066 52.381 5.38 0.00 0.00 6.13
2254 4835 1.485124 TGTGATCAGTGATACCGCCT 58.515 50.000 5.38 0.00 0.00 5.52
2255 4836 1.409064 TGTGATCAGTGATACCGCCTC 59.591 52.381 5.38 0.00 0.00 4.70
2256 4837 1.040646 TGATCAGTGATACCGCCTCC 58.959 55.000 5.38 0.00 0.00 4.30
2257 4838 0.039074 GATCAGTGATACCGCCTCCG 60.039 60.000 5.38 0.00 0.00 4.63
2258 4839 2.088674 ATCAGTGATACCGCCTCCGC 62.089 60.000 3.05 0.00 0.00 5.54
2268 4849 3.341835 GCCTCCGCGCTATCAAGC 61.342 66.667 5.56 0.00 45.86 4.01
2281 4862 4.781071 GCTATCAAGCTCGATCAAAATGG 58.219 43.478 0.00 0.00 45.85 3.16
2282 4863 4.320057 GCTATCAAGCTCGATCAAAATGGG 60.320 45.833 0.00 0.00 45.85 4.00
2283 4864 1.745087 TCAAGCTCGATCAAAATGGGC 59.255 47.619 0.00 0.00 0.00 5.36
2284 4865 1.473677 CAAGCTCGATCAAAATGGGCA 59.526 47.619 0.00 0.00 0.00 5.36
2285 4866 1.386533 AGCTCGATCAAAATGGGCAG 58.613 50.000 0.00 0.00 0.00 4.85
2286 4867 0.248784 GCTCGATCAAAATGGGCAGC 60.249 55.000 0.00 0.00 0.00 5.25
2287 4868 1.097232 CTCGATCAAAATGGGCAGCA 58.903 50.000 0.00 0.00 0.00 4.41
2288 4869 0.810648 TCGATCAAAATGGGCAGCAC 59.189 50.000 0.00 0.00 0.00 4.40
2289 4870 0.179129 CGATCAAAATGGGCAGCACC 60.179 55.000 0.00 0.00 37.93 5.01
2290 4871 0.179129 GATCAAAATGGGCAGCACCG 60.179 55.000 0.00 0.00 40.62 4.94
2291 4872 0.899717 ATCAAAATGGGCAGCACCGT 60.900 50.000 0.00 0.00 40.62 4.83
2292 4873 0.250945 TCAAAATGGGCAGCACCGTA 60.251 50.000 0.00 0.00 40.62 4.02
2293 4874 0.109319 CAAAATGGGCAGCACCGTAC 60.109 55.000 0.00 0.00 40.62 3.67
2294 4875 1.582610 AAAATGGGCAGCACCGTACG 61.583 55.000 8.69 8.69 40.62 3.67
2295 4876 2.457743 AAATGGGCAGCACCGTACGA 62.458 55.000 18.76 0.00 40.62 3.43
2296 4877 2.252072 AATGGGCAGCACCGTACGAT 62.252 55.000 18.76 0.00 40.62 3.73
2297 4878 2.890474 GGGCAGCACCGTACGATG 60.890 66.667 18.76 12.08 40.62 3.84
2298 4879 2.890474 GGCAGCACCGTACGATGG 60.890 66.667 18.76 6.63 0.00 3.51
2299 4880 2.183300 GCAGCACCGTACGATGGA 59.817 61.111 18.76 0.00 0.00 3.41
2300 4881 1.878522 GCAGCACCGTACGATGGAG 60.879 63.158 18.76 1.31 0.00 3.86
2301 4882 1.226974 CAGCACCGTACGATGGAGG 60.227 63.158 18.76 0.48 0.00 4.30
2302 4883 2.106332 GCACCGTACGATGGAGGG 59.894 66.667 18.76 0.90 0.00 4.30
2303 4884 2.106332 CACCGTACGATGGAGGGC 59.894 66.667 18.76 0.00 0.00 5.19
2304 4885 3.152400 ACCGTACGATGGAGGGCC 61.152 66.667 18.76 0.00 0.00 5.80
2315 4896 4.792804 GAGGGCCAGCTCCAGCAC 62.793 72.222 6.18 0.00 45.16 4.40
2318 4899 4.792804 GGCCAGCTCCAGCACCTC 62.793 72.222 0.00 0.00 45.16 3.85
2319 4900 4.792804 GCCAGCTCCAGCACCTCC 62.793 72.222 0.48 0.00 45.16 4.30
2320 4901 4.106925 CCAGCTCCAGCACCTCCC 62.107 72.222 0.48 0.00 45.16 4.30
2321 4902 4.463879 CAGCTCCAGCACCTCCCG 62.464 72.222 0.48 0.00 45.16 5.14
2322 4903 4.704103 AGCTCCAGCACCTCCCGA 62.704 66.667 0.48 0.00 45.16 5.14
2323 4904 4.459089 GCTCCAGCACCTCCCGAC 62.459 72.222 0.00 0.00 41.59 4.79
2324 4905 2.997315 CTCCAGCACCTCCCGACA 60.997 66.667 0.00 0.00 0.00 4.35
2325 4906 3.302347 CTCCAGCACCTCCCGACAC 62.302 68.421 0.00 0.00 0.00 3.67
2326 4907 4.742201 CCAGCACCTCCCGACACG 62.742 72.222 0.00 0.00 0.00 4.49
2333 4914 4.554363 CTCCCGACACGCCGCTAG 62.554 72.222 0.00 0.00 0.00 3.42
2335 4916 3.900892 CCCGACACGCCGCTAGAT 61.901 66.667 0.00 0.00 0.00 1.98
2336 4917 2.353607 CCGACACGCCGCTAGATC 60.354 66.667 0.00 0.00 0.00 2.75
2337 4918 2.407616 CGACACGCCGCTAGATCA 59.592 61.111 0.00 0.00 0.00 2.92
2338 4919 1.655654 CGACACGCCGCTAGATCAG 60.656 63.158 0.00 0.00 0.00 2.90
2346 4927 4.740235 GCTAGATCAGCGTCCACC 57.260 61.111 0.00 0.00 41.37 4.61
2347 4928 1.299468 GCTAGATCAGCGTCCACCG 60.299 63.158 0.00 0.00 41.37 4.94
2356 4937 3.380671 CGTCCACCGCGTTATCAC 58.619 61.111 4.92 0.00 0.00 3.06
2357 4938 1.444724 CGTCCACCGCGTTATCACA 60.445 57.895 4.92 0.00 0.00 3.58
2358 4939 0.804544 CGTCCACCGCGTTATCACAT 60.805 55.000 4.92 0.00 0.00 3.21
2359 4940 1.534385 CGTCCACCGCGTTATCACATA 60.534 52.381 4.92 0.00 0.00 2.29
2360 4941 2.750948 GTCCACCGCGTTATCACATAT 58.249 47.619 4.92 0.00 0.00 1.78
2361 4942 3.609879 CGTCCACCGCGTTATCACATATA 60.610 47.826 4.92 0.00 0.00 0.86
2362 4943 3.671928 GTCCACCGCGTTATCACATATAC 59.328 47.826 4.92 0.00 0.00 1.47
2363 4944 2.659757 CCACCGCGTTATCACATATACG 59.340 50.000 4.92 0.00 37.09 3.06
2364 4945 2.659757 CACCGCGTTATCACATATACGG 59.340 50.000 4.92 0.00 44.70 4.02
2365 4946 2.553602 ACCGCGTTATCACATATACGGA 59.446 45.455 4.92 0.00 41.86 4.69
2366 4947 3.192001 ACCGCGTTATCACATATACGGAT 59.808 43.478 4.92 0.00 41.86 4.18
2367 4948 4.171005 CCGCGTTATCACATATACGGATT 58.829 43.478 4.92 0.00 41.86 3.01
2368 4949 4.624024 CCGCGTTATCACATATACGGATTT 59.376 41.667 4.92 0.00 41.86 2.17
2369 4950 5.220154 CCGCGTTATCACATATACGGATTTC 60.220 44.000 4.92 0.00 41.86 2.17
2370 4951 5.220154 CGCGTTATCACATATACGGATTTCC 60.220 44.000 0.00 0.00 34.76 3.13
2371 4952 5.063060 GCGTTATCACATATACGGATTTCCC 59.937 44.000 0.00 0.00 34.76 3.97
2380 4961 2.791927 GGATTTCCCGACAAGCGC 59.208 61.111 0.00 0.00 39.11 5.92
2381 4962 1.745489 GGATTTCCCGACAAGCGCT 60.745 57.895 2.64 2.64 39.11 5.92
2382 4963 0.461339 GGATTTCCCGACAAGCGCTA 60.461 55.000 12.05 0.00 39.11 4.26
2383 4964 1.583054 GATTTCCCGACAAGCGCTAT 58.417 50.000 12.05 0.64 39.11 2.97
2384 4965 2.547218 GGATTTCCCGACAAGCGCTATA 60.547 50.000 12.05 0.00 39.11 1.31
2385 4966 2.218953 TTTCCCGACAAGCGCTATAG 57.781 50.000 12.05 6.62 39.11 1.31
2386 4967 1.395635 TTCCCGACAAGCGCTATAGA 58.604 50.000 12.05 0.00 39.11 1.98
2387 4968 1.617322 TCCCGACAAGCGCTATAGAT 58.383 50.000 12.05 0.00 39.11 1.98
2388 4969 1.269723 TCCCGACAAGCGCTATAGATG 59.730 52.381 12.05 7.56 39.11 2.90
2389 4970 1.269723 CCCGACAAGCGCTATAGATGA 59.730 52.381 12.05 0.00 39.11 2.92
2390 4971 2.094494 CCCGACAAGCGCTATAGATGAT 60.094 50.000 12.05 0.00 39.11 2.45
2391 4972 3.128764 CCCGACAAGCGCTATAGATGATA 59.871 47.826 12.05 0.00 39.11 2.15
2392 4973 4.202060 CCCGACAAGCGCTATAGATGATAT 60.202 45.833 12.05 0.00 39.11 1.63
2393 4974 4.973051 CCGACAAGCGCTATAGATGATATC 59.027 45.833 12.05 0.00 39.11 1.63
2410 4991 9.647918 AGATGATATCACACTAGTAGAAAAGGA 57.352 33.333 7.78 0.00 0.00 3.36
2454 5035 2.948600 GCCCATTAATCCCGGTTCAGTT 60.949 50.000 0.00 0.00 0.00 3.16
2473 5054 2.962421 GTTCAAAACCAGGACCAATGGA 59.038 45.455 6.16 0.00 40.51 3.41
2542 5123 1.681076 GCCCTTTAGTCCCGGTTCA 59.319 57.895 0.00 0.00 0.00 3.18
2596 5177 1.493854 TTAGTCCCGGTTGGTGGCAT 61.494 55.000 0.00 0.00 34.77 4.40
2640 5221 0.333312 TTAATCCCGGTTGGTGCCAT 59.667 50.000 0.00 0.00 34.77 4.40
2662 5243 1.587066 ACCGGGACTAATGGGCTTTA 58.413 50.000 6.32 0.00 0.00 1.85
2835 5423 6.353404 TGTGATATGTGGTCTAGTTGTTGA 57.647 37.500 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
152 161 0.926155 CGCTTCATCACACAGATCGG 59.074 55.000 0.00 0.00 33.72 4.18
154 163 2.200067 CCTCGCTTCATCACACAGATC 58.800 52.381 0.00 0.00 33.72 2.75
155 164 1.552337 ACCTCGCTTCATCACACAGAT 59.448 47.619 0.00 0.00 37.48 2.90
251 260 5.719173 AGTTGCTTGCACTTCTTAAACAAA 58.281 33.333 0.00 0.00 0.00 2.83
263 272 5.574443 GGAAATGAATAAGAGTTGCTTGCAC 59.426 40.000 0.00 0.00 37.42 4.57
288 297 2.091541 GCAGATTTGGAATTCGGGTGA 58.908 47.619 0.00 0.00 0.00 4.02
299 308 0.890683 GACAACCCCTGCAGATTTGG 59.109 55.000 17.39 12.32 0.00 3.28
378 2539 1.048601 TAATCCTCACCCTCCGCATC 58.951 55.000 0.00 0.00 0.00 3.91
516 2758 2.803713 GCGGTAGCTCGAAGCAAGC 61.804 63.158 9.09 0.00 45.56 4.01
537 2779 2.035237 AAACGAGAGGTTGGACGGCA 62.035 55.000 0.00 0.00 41.31 5.69
598 2863 2.180017 CGCAGCCTCAAATGGTGC 59.820 61.111 4.48 4.48 33.75 5.01
667 2964 7.695618 GTCAATACAAGTAGTTACGACCAGTAG 59.304 40.741 0.00 0.00 36.56 2.57
685 2982 1.578897 TGGGCTAGGCTGTCAATACA 58.421 50.000 16.80 0.00 0.00 2.29
686 2983 2.289565 GTTGGGCTAGGCTGTCAATAC 58.710 52.381 16.80 0.00 0.00 1.89
711 3033 0.388294 GCTAAGTAGGCCGACCGATT 59.612 55.000 12.93 3.32 42.76 3.34
798 3131 1.298014 GACCTGCCAGAGTCTTGGG 59.702 63.158 0.00 2.11 38.72 4.12
915 3296 2.737039 CGTGTGTTTTTGGGAGTTTGGG 60.737 50.000 0.00 0.00 0.00 4.12
918 3299 2.425668 CTCCGTGTGTTTTTGGGAGTTT 59.574 45.455 0.00 0.00 39.51 2.66
928 3309 3.004024 CACGTACTACTCCGTGTGTTT 57.996 47.619 4.17 0.00 46.87 2.83
955 3342 0.885150 GGCGGGTTTATAGGCAGAGC 60.885 60.000 0.00 0.00 0.00 4.09
1020 3410 3.213402 CTCTCCTCTCCCGGCGAC 61.213 72.222 9.30 0.00 0.00 5.19
1021 3411 2.980177 TTCTCTCCTCTCCCGGCGA 61.980 63.158 9.30 0.00 0.00 5.54
1022 3412 2.440430 TTCTCTCCTCTCCCGGCG 60.440 66.667 0.00 0.00 0.00 6.46
1023 3413 2.776913 CGTTCTCTCCTCTCCCGGC 61.777 68.421 0.00 0.00 0.00 6.13
1024 3414 0.966370 AACGTTCTCTCCTCTCCCGG 60.966 60.000 0.00 0.00 0.00 5.73
1025 3415 0.452585 GAACGTTCTCTCCTCTCCCG 59.547 60.000 20.97 0.00 0.00 5.14
1026 3416 0.818938 GGAACGTTCTCTCCTCTCCC 59.181 60.000 26.32 3.94 0.00 4.30
1027 3417 1.546961 TGGAACGTTCTCTCCTCTCC 58.453 55.000 26.32 9.12 32.51 3.71
1028 3418 3.878160 AATGGAACGTTCTCTCCTCTC 57.122 47.619 26.32 8.88 32.51 3.20
1029 3419 3.578716 TGAAATGGAACGTTCTCTCCTCT 59.421 43.478 26.32 6.38 32.51 3.69
1030 3420 3.926616 TGAAATGGAACGTTCTCTCCTC 58.073 45.455 26.32 16.52 32.51 3.71
1031 3421 4.559862 ATGAAATGGAACGTTCTCTCCT 57.440 40.909 26.32 8.89 32.51 3.69
1071 3473 2.093447 AGTGACCTTCATGGATCCGAAC 60.093 50.000 7.39 0.00 39.71 3.95
1075 3477 1.748591 GCCAGTGACCTTCATGGATCC 60.749 57.143 4.20 4.20 39.71 3.36
1076 3478 1.065199 TGCCAGTGACCTTCATGGATC 60.065 52.381 0.00 0.00 39.71 3.36
1077 3479 0.994247 TGCCAGTGACCTTCATGGAT 59.006 50.000 0.00 0.00 39.71 3.41
1122 3569 3.298958 CCTCAGGAGGCGCAGTTA 58.701 61.111 10.83 0.00 42.44 2.24
1138 3588 6.158598 TCAAACTAATTCACCACTACGTACC 58.841 40.000 0.00 0.00 0.00 3.34
1143 3593 5.873164 ACCGATCAAACTAATTCACCACTAC 59.127 40.000 0.00 0.00 0.00 2.73
1146 3596 5.622770 AACCGATCAAACTAATTCACCAC 57.377 39.130 0.00 0.00 0.00 4.16
1151 3601 9.916397 CATACAACTAACCGATCAAACTAATTC 57.084 33.333 0.00 0.00 0.00 2.17
1224 3679 1.664659 CTTGATCGCCTTCTGCTTCTG 59.335 52.381 0.00 0.00 38.05 3.02
1259 3714 7.453752 AGGAGAGTAATAAGTAAGTCACCACAA 59.546 37.037 0.00 0.00 0.00 3.33
1276 3731 7.148052 CGGATTCAGAGAAAAGTAGGAGAGTAA 60.148 40.741 0.00 0.00 0.00 2.24
1278 3733 5.126384 CGGATTCAGAGAAAAGTAGGAGAGT 59.874 44.000 0.00 0.00 0.00 3.24
1280 3735 4.142138 GCGGATTCAGAGAAAAGTAGGAGA 60.142 45.833 0.00 0.00 0.00 3.71
1286 3741 1.676014 CGGGCGGATTCAGAGAAAAGT 60.676 52.381 0.00 0.00 0.00 2.66
1287 3742 1.009829 CGGGCGGATTCAGAGAAAAG 58.990 55.000 0.00 0.00 0.00 2.27
1295 3750 2.515991 GAATGCCGGGCGGATTCA 60.516 61.111 21.02 2.43 37.50 2.57
1303 3758 0.177141 TTACGAGGAAGAATGCCGGG 59.823 55.000 2.18 0.00 40.87 5.73
1312 3767 2.419673 TGCATGCATGTTTACGAGGAAG 59.580 45.455 26.79 0.00 0.00 3.46
1316 3800 2.416202 TCAGTGCATGCATGTTTACGAG 59.584 45.455 25.64 18.79 0.00 4.18
1402 3890 0.337082 TGGTCGATACCTGGGGAAGA 59.663 55.000 0.00 0.00 46.91 2.87
1543 4044 3.056607 CCCTCATTGTCGCCATTCTTTTT 60.057 43.478 0.00 0.00 0.00 1.94
1545 4046 2.094675 CCCTCATTGTCGCCATTCTTT 58.905 47.619 0.00 0.00 0.00 2.52
1551 4052 0.254462 TATTGCCCTCATTGTCGCCA 59.746 50.000 0.00 0.00 0.00 5.69
1553 4054 2.032178 GTCTTATTGCCCTCATTGTCGC 59.968 50.000 0.00 0.00 0.00 5.19
1558 4059 3.117888 ACATCCGTCTTATTGCCCTCATT 60.118 43.478 0.00 0.00 0.00 2.57
1560 4061 1.837439 ACATCCGTCTTATTGCCCTCA 59.163 47.619 0.00 0.00 0.00 3.86
1562 4063 1.837439 TGACATCCGTCTTATTGCCCT 59.163 47.619 0.00 0.00 43.06 5.19
1563 4064 2.325583 TGACATCCGTCTTATTGCCC 57.674 50.000 0.00 0.00 43.06 5.36
1567 4068 5.046591 TCTCCTTGTTGACATCCGTCTTATT 60.047 40.000 0.00 0.00 43.06 1.40
1568 4069 4.466370 TCTCCTTGTTGACATCCGTCTTAT 59.534 41.667 0.00 0.00 43.06 1.73
1569 4070 3.830178 TCTCCTTGTTGACATCCGTCTTA 59.170 43.478 0.00 0.00 43.06 2.10
1573 4077 2.632996 TCTTCTCCTTGTTGACATCCGT 59.367 45.455 0.00 0.00 0.00 4.69
1574 4078 2.996621 GTCTTCTCCTTGTTGACATCCG 59.003 50.000 0.00 0.00 0.00 4.18
1578 4082 3.454375 GTTCGTCTTCTCCTTGTTGACA 58.546 45.455 0.00 0.00 0.00 3.58
1580 4084 2.545113 CCGTTCGTCTTCTCCTTGTTGA 60.545 50.000 0.00 0.00 0.00 3.18
1581 4085 1.792949 CCGTTCGTCTTCTCCTTGTTG 59.207 52.381 0.00 0.00 0.00 3.33
1584 4088 0.319555 TGCCGTTCGTCTTCTCCTTG 60.320 55.000 0.00 0.00 0.00 3.61
1588 4092 2.437343 CGCTGCCGTTCGTCTTCTC 61.437 63.158 0.00 0.00 0.00 2.87
1603 4107 3.692406 GTCCGTCTTGTCCCCGCT 61.692 66.667 0.00 0.00 0.00 5.52
1616 4126 3.411351 CCTTCGTGTTGCCGTCCG 61.411 66.667 0.00 0.00 0.00 4.79
1683 4208 2.096442 GTAACACGGCTGCGGGTAC 61.096 63.158 11.99 4.80 0.00 3.34
1684 4209 2.262292 GTAACACGGCTGCGGGTA 59.738 61.111 11.99 0.00 0.00 3.69
1698 4223 4.498346 TCGGTGTGGACGAGGTAA 57.502 55.556 0.00 0.00 35.12 2.85
1767 4298 2.522060 CGATCAATCGGCTGGCTAC 58.478 57.895 4.48 0.00 45.93 3.58
1780 4342 0.397675 AGGCTGATGAGTCCCGATCA 60.398 55.000 0.00 0.00 0.00 2.92
1801 4363 3.188786 GTCGATCACCGGTGCAGC 61.189 66.667 30.25 19.21 39.14 5.25
1833 4395 1.615883 AGCTCACACGGCCATAGATAG 59.384 52.381 2.24 0.00 0.00 2.08
1842 4404 3.644884 ATATGTACTAGCTCACACGGC 57.355 47.619 0.00 0.00 0.00 5.68
1907 4484 5.443283 TCTCCACACTGTAGTTCCGTATAT 58.557 41.667 0.00 0.00 0.00 0.86
1908 4485 4.847198 TCTCCACACTGTAGTTCCGTATA 58.153 43.478 0.00 0.00 0.00 1.47
1917 4494 9.706691 TTTATTTAGTTCTTCTCCACACTGTAG 57.293 33.333 0.00 0.00 0.00 2.74
1944 4525 2.243602 ACCCAAATGCAGCAGTTTTG 57.756 45.000 5.07 9.76 0.00 2.44
1972 4553 7.931578 AAAAGGACCATGTAATAACGAATGA 57.068 32.000 0.00 0.00 0.00 2.57
1996 4577 2.938838 TCTCCTTTTCTCCCGCAAAAA 58.061 42.857 0.00 0.00 0.00 1.94
1997 4578 2.649531 TCTCCTTTTCTCCCGCAAAA 57.350 45.000 0.00 0.00 0.00 2.44
1998 4579 2.879103 ATCTCCTTTTCTCCCGCAAA 57.121 45.000 0.00 0.00 0.00 3.68
1999 4580 2.305927 AGAATCTCCTTTTCTCCCGCAA 59.694 45.455 0.00 0.00 0.00 4.85
2000 4581 1.909302 AGAATCTCCTTTTCTCCCGCA 59.091 47.619 0.00 0.00 0.00 5.69
2001 4582 2.093447 TGAGAATCTCCTTTTCTCCCGC 60.093 50.000 7.91 0.00 45.52 6.13
2002 4583 3.895232 TGAGAATCTCCTTTTCTCCCG 57.105 47.619 7.91 0.00 45.52 5.14
2003 4584 6.894682 AGTAATGAGAATCTCCTTTTCTCCC 58.105 40.000 7.91 0.00 45.52 4.30
2004 4585 9.320352 GTAAGTAATGAGAATCTCCTTTTCTCC 57.680 37.037 7.91 0.00 45.52 3.71
2005 4586 9.026074 CGTAAGTAATGAGAATCTCCTTTTCTC 57.974 37.037 7.91 6.50 46.04 2.87
2006 4587 7.982354 CCGTAAGTAATGAGAATCTCCTTTTCT 59.018 37.037 7.91 2.65 36.16 2.52
2007 4588 7.980099 TCCGTAAGTAATGAGAATCTCCTTTTC 59.020 37.037 7.91 0.44 34.92 2.29
2008 4589 7.848128 TCCGTAAGTAATGAGAATCTCCTTTT 58.152 34.615 7.91 2.07 34.92 2.27
2009 4590 7.418025 CCTCCGTAAGTAATGAGAATCTCCTTT 60.418 40.741 7.91 4.49 34.92 3.11
2010 4591 6.041069 CCTCCGTAAGTAATGAGAATCTCCTT 59.959 42.308 7.91 6.90 34.92 3.36
2011 4592 5.536916 CCTCCGTAAGTAATGAGAATCTCCT 59.463 44.000 7.91 0.00 34.92 3.69
2012 4593 5.774630 CCTCCGTAAGTAATGAGAATCTCC 58.225 45.833 7.91 0.00 34.92 3.71
2013 4594 5.010213 AGCCTCCGTAAGTAATGAGAATCTC 59.990 44.000 2.75 2.75 34.92 2.75
2014 4595 4.896482 AGCCTCCGTAAGTAATGAGAATCT 59.104 41.667 0.00 0.00 34.92 2.40
2015 4596 5.203060 AGCCTCCGTAAGTAATGAGAATC 57.797 43.478 0.00 0.00 0.00 2.52
2016 4597 5.615925 AAGCCTCCGTAAGTAATGAGAAT 57.384 39.130 0.00 0.00 0.00 2.40
2017 4598 5.416271 AAAGCCTCCGTAAGTAATGAGAA 57.584 39.130 0.00 0.00 0.00 2.87
2018 4599 5.046878 TGAAAAGCCTCCGTAAGTAATGAGA 60.047 40.000 0.00 0.00 0.00 3.27
2019 4600 5.175859 TGAAAAGCCTCCGTAAGTAATGAG 58.824 41.667 0.00 0.00 0.00 2.90
2020 4601 5.155278 TGAAAAGCCTCCGTAAGTAATGA 57.845 39.130 0.00 0.00 0.00 2.57
2021 4602 4.201822 GCTGAAAAGCCTCCGTAAGTAATG 60.202 45.833 0.00 0.00 0.00 1.90
2022 4603 3.939592 GCTGAAAAGCCTCCGTAAGTAAT 59.060 43.478 0.00 0.00 0.00 1.89
2023 4604 3.332034 GCTGAAAAGCCTCCGTAAGTAA 58.668 45.455 0.00 0.00 0.00 2.24
2024 4605 2.968675 GCTGAAAAGCCTCCGTAAGTA 58.031 47.619 0.00 0.00 0.00 2.24
2025 4606 1.809684 GCTGAAAAGCCTCCGTAAGT 58.190 50.000 0.00 0.00 0.00 2.24
2035 4616 1.270465 ACTTGGCATTGGCTGAAAAGC 60.270 47.619 11.84 0.00 40.87 3.51
2036 4617 2.825861 ACTTGGCATTGGCTGAAAAG 57.174 45.000 11.84 8.81 40.87 2.27
2037 4618 3.557228 AAACTTGGCATTGGCTGAAAA 57.443 38.095 11.84 0.00 40.87 2.29
2038 4619 3.551863 CGTAAACTTGGCATTGGCTGAAA 60.552 43.478 11.84 0.00 40.87 2.69
2039 4620 2.030363 CGTAAACTTGGCATTGGCTGAA 60.030 45.455 11.84 0.00 40.87 3.02
2040 4621 1.539388 CGTAAACTTGGCATTGGCTGA 59.461 47.619 11.84 0.00 40.87 4.26
2041 4622 1.539388 TCGTAAACTTGGCATTGGCTG 59.461 47.619 11.84 6.96 40.87 4.85
2042 4623 1.904287 TCGTAAACTTGGCATTGGCT 58.096 45.000 11.84 0.00 40.87 4.75
2043 4624 2.715737 TTCGTAAACTTGGCATTGGC 57.284 45.000 2.73 2.73 40.13 4.52
2063 4644 5.422012 ACTTGGCATTCGGGATTAGATTTTT 59.578 36.000 0.00 0.00 0.00 1.94
2064 4645 4.956075 ACTTGGCATTCGGGATTAGATTTT 59.044 37.500 0.00 0.00 0.00 1.82
2065 4646 4.339247 CACTTGGCATTCGGGATTAGATTT 59.661 41.667 0.00 0.00 0.00 2.17
2066 4647 3.885297 CACTTGGCATTCGGGATTAGATT 59.115 43.478 0.00 0.00 0.00 2.40
2067 4648 3.480470 CACTTGGCATTCGGGATTAGAT 58.520 45.455 0.00 0.00 0.00 1.98
2068 4649 2.917933 CACTTGGCATTCGGGATTAGA 58.082 47.619 0.00 0.00 0.00 2.10
2069 4650 1.334869 GCACTTGGCATTCGGGATTAG 59.665 52.381 0.00 0.00 43.97 1.73
2070 4651 1.388547 GCACTTGGCATTCGGGATTA 58.611 50.000 0.00 0.00 43.97 1.75
2071 4652 2.192605 GCACTTGGCATTCGGGATT 58.807 52.632 0.00 0.00 43.97 3.01
2072 4653 3.924507 GCACTTGGCATTCGGGAT 58.075 55.556 0.00 0.00 43.97 3.85
2082 4663 0.107897 TGTATGGCCGTAGCACTTGG 60.108 55.000 4.44 0.00 42.56 3.61
2083 4664 1.006832 GTGTATGGCCGTAGCACTTG 58.993 55.000 21.11 0.00 42.56 3.16
2084 4665 0.459585 CGTGTATGGCCGTAGCACTT 60.460 55.000 23.53 0.00 42.56 3.16
2085 4666 1.141019 CGTGTATGGCCGTAGCACT 59.859 57.895 23.53 0.00 42.56 4.40
2086 4667 1.881252 CCGTGTATGGCCGTAGCAC 60.881 63.158 19.60 19.60 42.56 4.40
2087 4668 2.497293 CCGTGTATGGCCGTAGCA 59.503 61.111 4.44 4.09 42.56 3.49
2095 4676 2.095853 GTCATGAACTTGCCGTGTATGG 59.904 50.000 0.00 0.00 0.00 2.74
2096 4677 3.002791 AGTCATGAACTTGCCGTGTATG 58.997 45.455 0.00 0.00 33.03 2.39
2097 4678 3.334583 AGTCATGAACTTGCCGTGTAT 57.665 42.857 0.00 0.00 33.03 2.29
2098 4679 2.831685 AGTCATGAACTTGCCGTGTA 57.168 45.000 0.00 0.00 33.03 2.90
2099 4680 2.806244 GTTAGTCATGAACTTGCCGTGT 59.194 45.455 0.00 0.00 39.55 4.49
2100 4681 3.067106 AGTTAGTCATGAACTTGCCGTG 58.933 45.455 0.00 0.00 39.55 4.94
2101 4682 3.402628 AGTTAGTCATGAACTTGCCGT 57.597 42.857 0.00 0.00 39.55 5.68
2102 4683 4.749245 AAAGTTAGTCATGAACTTGCCG 57.251 40.909 11.15 0.00 44.43 5.69
2103 4684 7.965107 CAGAATAAAGTTAGTCATGAACTTGCC 59.035 37.037 11.15 3.27 44.43 4.52
2104 4685 7.483059 GCAGAATAAAGTTAGTCATGAACTTGC 59.517 37.037 11.15 7.07 44.43 4.01
2105 4686 7.689812 CGCAGAATAAAGTTAGTCATGAACTTG 59.310 37.037 11.15 1.66 44.43 3.16
2106 4687 7.602644 TCGCAGAATAAAGTTAGTCATGAACTT 59.397 33.333 5.60 5.60 46.57 2.66
2107 4688 7.063544 GTCGCAGAATAAAGTTAGTCATGAACT 59.936 37.037 0.00 0.00 39.69 3.01
2108 4689 7.174082 GTCGCAGAATAAAGTTAGTCATGAAC 58.826 38.462 0.00 0.00 39.69 3.18
2109 4690 6.312918 GGTCGCAGAATAAAGTTAGTCATGAA 59.687 38.462 0.00 0.00 39.69 2.57
2110 4691 5.810587 GGTCGCAGAATAAAGTTAGTCATGA 59.189 40.000 0.00 0.00 39.69 3.07
2111 4692 5.276395 CGGTCGCAGAATAAAGTTAGTCATG 60.276 44.000 1.81 0.00 39.69 3.07
2112 4693 4.804139 CGGTCGCAGAATAAAGTTAGTCAT 59.196 41.667 1.81 0.00 39.69 3.06
2113 4694 4.082625 TCGGTCGCAGAATAAAGTTAGTCA 60.083 41.667 1.81 0.00 39.69 3.41
2114 4695 4.264849 GTCGGTCGCAGAATAAAGTTAGTC 59.735 45.833 0.00 0.00 39.69 2.59
2115 4696 4.171754 GTCGGTCGCAGAATAAAGTTAGT 58.828 43.478 0.00 0.00 39.69 2.24
2116 4697 4.171005 TGTCGGTCGCAGAATAAAGTTAG 58.829 43.478 0.00 0.00 39.69 2.34
2117 4698 4.177165 TGTCGGTCGCAGAATAAAGTTA 57.823 40.909 0.00 0.00 39.69 2.24
2118 4699 3.034721 TGTCGGTCGCAGAATAAAGTT 57.965 42.857 0.00 0.00 39.69 2.66
2119 4700 2.735134 GTTGTCGGTCGCAGAATAAAGT 59.265 45.455 0.00 0.00 39.69 2.66
2120 4701 2.734606 TGTTGTCGGTCGCAGAATAAAG 59.265 45.455 0.00 0.00 39.69 1.85
2121 4702 2.756829 TGTTGTCGGTCGCAGAATAAA 58.243 42.857 0.00 0.00 39.69 1.40
2122 4703 2.442212 TGTTGTCGGTCGCAGAATAA 57.558 45.000 0.00 0.00 39.69 1.40
2123 4704 2.063266 GTTGTTGTCGGTCGCAGAATA 58.937 47.619 0.00 0.00 39.69 1.75
2124 4705 0.865769 GTTGTTGTCGGTCGCAGAAT 59.134 50.000 0.00 0.00 39.69 2.40
2125 4706 1.484227 CGTTGTTGTCGGTCGCAGAA 61.484 55.000 0.00 0.00 39.69 3.02
2126 4707 1.947146 CGTTGTTGTCGGTCGCAGA 60.947 57.895 0.00 0.00 0.00 4.26
2127 4708 1.876453 CTCGTTGTTGTCGGTCGCAG 61.876 60.000 0.00 0.00 0.00 5.18
2128 4709 1.947146 CTCGTTGTTGTCGGTCGCA 60.947 57.895 0.00 0.00 0.00 5.10
2129 4710 0.661187 TACTCGTTGTTGTCGGTCGC 60.661 55.000 0.00 0.00 0.00 5.19
2130 4711 1.757574 TTACTCGTTGTTGTCGGTCG 58.242 50.000 0.00 0.00 0.00 4.79
2131 4712 3.798337 TCTTTTACTCGTTGTTGTCGGTC 59.202 43.478 0.00 0.00 0.00 4.79
2132 4713 3.784338 TCTTTTACTCGTTGTTGTCGGT 58.216 40.909 0.00 0.00 0.00 4.69
2133 4714 4.782252 TTCTTTTACTCGTTGTTGTCGG 57.218 40.909 0.00 0.00 0.00 4.79
2134 4715 6.646636 AGATTTCTTTTACTCGTTGTTGTCG 58.353 36.000 0.00 0.00 0.00 4.35
2135 4716 7.070183 GGAGATTTCTTTTACTCGTTGTTGTC 58.930 38.462 0.00 0.00 0.00 3.18
2136 4717 6.017357 GGGAGATTTCTTTTACTCGTTGTTGT 60.017 38.462 0.00 0.00 0.00 3.32
2137 4718 6.204882 AGGGAGATTTCTTTTACTCGTTGTTG 59.795 38.462 0.00 0.00 0.00 3.33
2138 4719 6.296803 AGGGAGATTTCTTTTACTCGTTGTT 58.703 36.000 0.00 0.00 0.00 2.83
2139 4720 5.866207 AGGGAGATTTCTTTTACTCGTTGT 58.134 37.500 0.00 0.00 0.00 3.32
2140 4721 7.224949 GGATAGGGAGATTTCTTTTACTCGTTG 59.775 40.741 0.00 0.00 0.00 4.10
2141 4722 7.273712 GGATAGGGAGATTTCTTTTACTCGTT 58.726 38.462 0.00 0.00 0.00 3.85
2142 4723 6.183360 GGGATAGGGAGATTTCTTTTACTCGT 60.183 42.308 0.00 0.00 0.00 4.18
2143 4724 6.224584 GGGATAGGGAGATTTCTTTTACTCG 58.775 44.000 0.00 0.00 0.00 4.18
2144 4725 6.101296 TGGGGATAGGGAGATTTCTTTTACTC 59.899 42.308 0.00 0.00 0.00 2.59
2145 4726 5.976870 TGGGGATAGGGAGATTTCTTTTACT 59.023 40.000 0.00 0.00 0.00 2.24
2146 4727 6.126449 ACTGGGGATAGGGAGATTTCTTTTAC 60.126 42.308 0.00 0.00 0.00 2.01
2147 4728 5.976870 ACTGGGGATAGGGAGATTTCTTTTA 59.023 40.000 0.00 0.00 0.00 1.52
2148 4729 4.796265 ACTGGGGATAGGGAGATTTCTTTT 59.204 41.667 0.00 0.00 0.00 2.27
2149 4730 4.384465 ACTGGGGATAGGGAGATTTCTTT 58.616 43.478 0.00 0.00 0.00 2.52
2150 4731 4.027782 ACTGGGGATAGGGAGATTTCTT 57.972 45.455 0.00 0.00 0.00 2.52
2151 4732 3.718956 CAACTGGGGATAGGGAGATTTCT 59.281 47.826 0.00 0.00 0.00 2.52
2152 4733 3.716872 TCAACTGGGGATAGGGAGATTTC 59.283 47.826 0.00 0.00 0.00 2.17
2153 4734 3.718956 CTCAACTGGGGATAGGGAGATTT 59.281 47.826 0.00 0.00 0.00 2.17
2154 4735 3.321950 CTCAACTGGGGATAGGGAGATT 58.678 50.000 0.00 0.00 0.00 2.40
2155 4736 2.428484 CCTCAACTGGGGATAGGGAGAT 60.428 54.545 0.00 0.00 0.00 2.75
2156 4737 1.062121 CCTCAACTGGGGATAGGGAGA 60.062 57.143 0.00 0.00 0.00 3.71
2157 4738 1.428869 CCTCAACTGGGGATAGGGAG 58.571 60.000 0.00 0.00 0.00 4.30
2158 4739 0.694444 GCCTCAACTGGGGATAGGGA 60.694 60.000 0.00 0.00 0.00 4.20
2159 4740 1.709994 GGCCTCAACTGGGGATAGGG 61.710 65.000 0.00 0.00 0.00 3.53
2160 4741 0.988145 TGGCCTCAACTGGGGATAGG 60.988 60.000 3.32 0.00 0.00 2.57
2161 4742 0.471617 CTGGCCTCAACTGGGGATAG 59.528 60.000 3.32 0.00 0.00 2.08
2162 4743 0.044092 TCTGGCCTCAACTGGGGATA 59.956 55.000 3.32 0.00 0.00 2.59
2163 4744 0.625683 ATCTGGCCTCAACTGGGGAT 60.626 55.000 3.32 0.00 0.00 3.85
2164 4745 0.846427 AATCTGGCCTCAACTGGGGA 60.846 55.000 3.32 0.00 0.00 4.81
2165 4746 0.394899 GAATCTGGCCTCAACTGGGG 60.395 60.000 3.32 0.00 0.00 4.96
2166 4747 0.394899 GGAATCTGGCCTCAACTGGG 60.395 60.000 3.32 0.00 0.00 4.45
2167 4748 0.745845 CGGAATCTGGCCTCAACTGG 60.746 60.000 3.32 0.00 0.00 4.00
2168 4749 0.250234 TCGGAATCTGGCCTCAACTG 59.750 55.000 3.32 0.00 0.00 3.16
2169 4750 0.984230 TTCGGAATCTGGCCTCAACT 59.016 50.000 3.32 0.00 0.00 3.16
2170 4751 1.943340 GATTCGGAATCTGGCCTCAAC 59.057 52.381 20.70 0.00 35.02 3.18
2171 4752 1.839994 AGATTCGGAATCTGGCCTCAA 59.160 47.619 27.70 0.00 46.16 3.02
2172 4753 1.500474 AGATTCGGAATCTGGCCTCA 58.500 50.000 27.70 0.00 46.16 3.86
2180 4761 5.183228 TGTTGGTTAAGGAGATTCGGAATC 58.817 41.667 20.48 20.48 38.20 2.52
2181 4762 5.174037 TGTTGGTTAAGGAGATTCGGAAT 57.826 39.130 2.19 2.19 0.00 3.01
2182 4763 4.627284 TGTTGGTTAAGGAGATTCGGAA 57.373 40.909 0.00 0.00 0.00 4.30
2183 4764 4.019681 ACATGTTGGTTAAGGAGATTCGGA 60.020 41.667 0.00 0.00 0.00 4.55
2184 4765 4.094887 CACATGTTGGTTAAGGAGATTCGG 59.905 45.833 0.00 0.00 0.00 4.30
2185 4766 4.935205 TCACATGTTGGTTAAGGAGATTCG 59.065 41.667 0.00 0.00 0.00 3.34
2186 4767 6.375455 ACATCACATGTTGGTTAAGGAGATTC 59.625 38.462 0.00 0.00 41.63 2.52
2187 4768 6.248433 ACATCACATGTTGGTTAAGGAGATT 58.752 36.000 0.00 0.00 41.63 2.40
2188 4769 5.819991 ACATCACATGTTGGTTAAGGAGAT 58.180 37.500 0.00 0.00 41.63 2.75
2189 4770 5.241403 ACATCACATGTTGGTTAAGGAGA 57.759 39.130 0.00 0.00 41.63 3.71
2190 4771 6.018751 CGATACATCACATGTTGGTTAAGGAG 60.019 42.308 0.00 0.00 41.63 3.69
2191 4772 5.815222 CGATACATCACATGTTGGTTAAGGA 59.185 40.000 0.00 0.00 41.63 3.36
2192 4773 5.815222 TCGATACATCACATGTTGGTTAAGG 59.185 40.000 0.00 0.00 41.63 2.69
2193 4774 6.902224 TCGATACATCACATGTTGGTTAAG 57.098 37.500 0.00 0.00 41.63 1.85
2194 4775 6.200097 CGATCGATACATCACATGTTGGTTAA 59.800 38.462 10.26 0.00 41.63 2.01
2195 4776 5.689961 CGATCGATACATCACATGTTGGTTA 59.310 40.000 10.26 0.00 41.63 2.85
2196 4777 4.507756 CGATCGATACATCACATGTTGGTT 59.492 41.667 10.26 0.00 41.63 3.67
2197 4778 4.051237 CGATCGATACATCACATGTTGGT 58.949 43.478 10.26 0.00 41.63 3.67
2198 4779 4.298332 TCGATCGATACATCACATGTTGG 58.702 43.478 15.15 0.00 41.63 3.77
2199 4780 5.061435 GGATCGATCGATACATCACATGTTG 59.939 44.000 31.03 0.00 44.38 3.33
2200 4781 5.047731 AGGATCGATCGATACATCACATGTT 60.048 40.000 35.43 13.97 44.38 2.71
2201 4782 4.460731 AGGATCGATCGATACATCACATGT 59.539 41.667 35.43 14.65 46.92 3.21
2202 4783 4.991472 AGGATCGATCGATACATCACATG 58.009 43.478 35.43 0.00 37.91 3.21
2203 4784 5.242069 GAGGATCGATCGATACATCACAT 57.758 43.478 35.43 18.36 37.91 3.21
2204 4785 4.686839 GAGGATCGATCGATACATCACA 57.313 45.455 35.43 6.46 37.91 3.58
2219 4800 1.272490 TCACAACACACTCCGAGGATC 59.728 52.381 0.00 0.00 0.00 3.36
2220 4801 1.338107 TCACAACACACTCCGAGGAT 58.662 50.000 0.00 0.00 0.00 3.24
2221 4802 1.272490 GATCACAACACACTCCGAGGA 59.728 52.381 0.00 0.00 0.00 3.71
2222 4803 1.000843 TGATCACAACACACTCCGAGG 59.999 52.381 0.00 0.00 0.00 4.63
2223 4804 2.288457 ACTGATCACAACACACTCCGAG 60.288 50.000 0.00 0.00 0.00 4.63
2224 4805 1.686587 ACTGATCACAACACACTCCGA 59.313 47.619 0.00 0.00 0.00 4.55
2225 4806 1.794701 CACTGATCACAACACACTCCG 59.205 52.381 0.00 0.00 0.00 4.63
2226 4807 3.111853 TCACTGATCACAACACACTCC 57.888 47.619 0.00 0.00 0.00 3.85
2227 4808 4.627467 GGTATCACTGATCACAACACACTC 59.373 45.833 0.00 0.00 0.00 3.51
2228 4809 4.569943 GGTATCACTGATCACAACACACT 58.430 43.478 0.00 0.00 0.00 3.55
2229 4810 3.367932 CGGTATCACTGATCACAACACAC 59.632 47.826 0.00 0.00 0.00 3.82
2230 4811 3.584834 CGGTATCACTGATCACAACACA 58.415 45.455 0.00 0.00 0.00 3.72
2231 4812 2.348666 GCGGTATCACTGATCACAACAC 59.651 50.000 0.00 0.00 0.00 3.32
2232 4813 2.616960 GCGGTATCACTGATCACAACA 58.383 47.619 0.00 0.00 0.00 3.33
2233 4814 1.933853 GGCGGTATCACTGATCACAAC 59.066 52.381 0.00 0.00 0.00 3.32
2234 4815 1.831106 AGGCGGTATCACTGATCACAA 59.169 47.619 0.00 0.00 0.00 3.33
2235 4816 1.409064 GAGGCGGTATCACTGATCACA 59.591 52.381 0.00 0.00 0.00 3.58
2236 4817 1.269831 GGAGGCGGTATCACTGATCAC 60.270 57.143 0.00 0.00 0.00 3.06
2237 4818 1.040646 GGAGGCGGTATCACTGATCA 58.959 55.000 0.00 0.00 0.00 2.92
2238 4819 0.039074 CGGAGGCGGTATCACTGATC 60.039 60.000 0.00 0.00 0.00 2.92
2239 4820 2.041976 CGGAGGCGGTATCACTGAT 58.958 57.895 0.00 0.00 0.00 2.90
2240 4821 2.782222 GCGGAGGCGGTATCACTGA 61.782 63.158 0.00 0.00 0.00 3.41
2241 4822 2.279517 GCGGAGGCGGTATCACTG 60.280 66.667 0.00 0.00 0.00 3.66
2251 4832 3.341835 GCTTGATAGCGCGGAGGC 61.342 66.667 8.83 0.00 37.71 4.70
2260 4841 4.320057 GCCCATTTTGATCGAGCTTGATAG 60.320 45.833 16.74 3.33 0.00 2.08
2261 4842 3.565482 GCCCATTTTGATCGAGCTTGATA 59.435 43.478 16.74 1.37 0.00 2.15
2262 4843 2.360165 GCCCATTTTGATCGAGCTTGAT 59.640 45.455 16.73 16.73 0.00 2.57
2263 4844 1.745087 GCCCATTTTGATCGAGCTTGA 59.255 47.619 6.01 6.01 0.00 3.02
2264 4845 1.473677 TGCCCATTTTGATCGAGCTTG 59.526 47.619 0.90 0.00 0.00 4.01
2265 4846 1.747355 CTGCCCATTTTGATCGAGCTT 59.253 47.619 0.90 0.00 0.00 3.74
2266 4847 1.386533 CTGCCCATTTTGATCGAGCT 58.613 50.000 0.90 0.00 0.00 4.09
2267 4848 0.248784 GCTGCCCATTTTGATCGAGC 60.249 55.000 0.00 0.00 0.00 5.03
2268 4849 1.097232 TGCTGCCCATTTTGATCGAG 58.903 50.000 0.00 0.00 0.00 4.04
2269 4850 0.810648 GTGCTGCCCATTTTGATCGA 59.189 50.000 0.00 0.00 0.00 3.59
2270 4851 0.179129 GGTGCTGCCCATTTTGATCG 60.179 55.000 0.00 0.00 0.00 3.69
2271 4852 0.179129 CGGTGCTGCCCATTTTGATC 60.179 55.000 0.00 0.00 0.00 2.92
2272 4853 0.899717 ACGGTGCTGCCCATTTTGAT 60.900 50.000 0.00 0.00 0.00 2.57
2273 4854 0.250945 TACGGTGCTGCCCATTTTGA 60.251 50.000 0.00 0.00 0.00 2.69
2274 4855 0.109319 GTACGGTGCTGCCCATTTTG 60.109 55.000 0.00 0.00 0.00 2.44
2275 4856 1.582610 CGTACGGTGCTGCCCATTTT 61.583 55.000 7.57 0.00 0.00 1.82
2276 4857 2.038269 CGTACGGTGCTGCCCATTT 61.038 57.895 7.57 0.00 0.00 2.32
2277 4858 2.252072 ATCGTACGGTGCTGCCCATT 62.252 55.000 16.52 0.00 0.00 3.16
2278 4859 2.731571 ATCGTACGGTGCTGCCCAT 61.732 57.895 16.52 0.00 0.00 4.00
2279 4860 3.387091 ATCGTACGGTGCTGCCCA 61.387 61.111 16.52 0.00 0.00 5.36
2280 4861 2.890474 CATCGTACGGTGCTGCCC 60.890 66.667 16.71 0.00 0.00 5.36
2281 4862 2.890474 CCATCGTACGGTGCTGCC 60.890 66.667 23.08 0.00 0.00 4.85
2282 4863 1.878522 CTCCATCGTACGGTGCTGC 60.879 63.158 23.08 0.00 0.00 5.25
2283 4864 1.226974 CCTCCATCGTACGGTGCTG 60.227 63.158 23.08 15.98 0.00 4.41
2284 4865 2.423898 CCCTCCATCGTACGGTGCT 61.424 63.158 23.08 0.00 0.00 4.40
2285 4866 2.106332 CCCTCCATCGTACGGTGC 59.894 66.667 23.08 0.00 0.00 5.01
2286 4867 2.106332 GCCCTCCATCGTACGGTG 59.894 66.667 21.63 21.63 0.00 4.94
2287 4868 3.152400 GGCCCTCCATCGTACGGT 61.152 66.667 16.52 4.91 0.00 4.83
2288 4869 3.151710 TGGCCCTCCATCGTACGG 61.152 66.667 16.52 0.00 37.47 4.02
2289 4870 2.417516 CTGGCCCTCCATCGTACG 59.582 66.667 9.53 9.53 42.51 3.67
2290 4871 2.109181 GCTGGCCCTCCATCGTAC 59.891 66.667 0.00 0.00 42.51 3.67
2291 4872 2.041922 AGCTGGCCCTCCATCGTA 60.042 61.111 0.00 0.00 42.51 3.43
2292 4873 3.474570 GAGCTGGCCCTCCATCGT 61.475 66.667 0.00 0.00 42.51 3.73
2298 4879 4.792804 GTGCTGGAGCTGGCCCTC 62.793 72.222 0.00 0.00 42.66 4.30
2301 4882 4.792804 GAGGTGCTGGAGCTGGCC 62.793 72.222 5.38 0.00 42.66 5.36
2302 4883 4.792804 GGAGGTGCTGGAGCTGGC 62.793 72.222 5.38 0.00 42.66 4.85
2303 4884 4.106925 GGGAGGTGCTGGAGCTGG 62.107 72.222 5.38 0.00 42.66 4.85
2304 4885 4.463879 CGGGAGGTGCTGGAGCTG 62.464 72.222 5.38 0.00 42.66 4.24
2305 4886 4.704103 TCGGGAGGTGCTGGAGCT 62.704 66.667 0.00 0.00 42.66 4.09
2306 4887 4.459089 GTCGGGAGGTGCTGGAGC 62.459 72.222 0.00 0.00 42.50 4.70
2307 4888 2.997315 TGTCGGGAGGTGCTGGAG 60.997 66.667 0.00 0.00 0.00 3.86
2308 4889 3.311110 GTGTCGGGAGGTGCTGGA 61.311 66.667 0.00 0.00 0.00 3.86
2309 4890 4.742201 CGTGTCGGGAGGTGCTGG 62.742 72.222 0.00 0.00 0.00 4.85
2316 4897 4.554363 CTAGCGGCGTGTCGGGAG 62.554 72.222 9.37 0.00 0.00 4.30
2318 4899 3.825833 GATCTAGCGGCGTGTCGGG 62.826 68.421 9.37 0.00 0.00 5.14
2319 4900 2.353607 GATCTAGCGGCGTGTCGG 60.354 66.667 9.37 0.00 0.00 4.79
2320 4901 1.655654 CTGATCTAGCGGCGTGTCG 60.656 63.158 9.37 0.00 0.00 4.35
2321 4902 1.946650 GCTGATCTAGCGGCGTGTC 60.947 63.158 9.37 0.51 43.63 3.67
2322 4903 2.105128 GCTGATCTAGCGGCGTGT 59.895 61.111 9.37 0.00 43.63 4.49
2340 4921 2.212869 TATGTGATAACGCGGTGGAC 57.787 50.000 7.07 0.10 0.00 4.02
2341 4922 3.609879 CGTATATGTGATAACGCGGTGGA 60.610 47.826 7.07 0.00 0.00 4.02
2342 4923 2.659757 CGTATATGTGATAACGCGGTGG 59.340 50.000 7.07 0.00 0.00 4.61
2343 4924 2.659757 CCGTATATGTGATAACGCGGTG 59.340 50.000 7.07 0.00 34.13 4.94
2344 4925 2.553602 TCCGTATATGTGATAACGCGGT 59.446 45.455 12.47 6.42 39.07 5.68
2345 4926 3.206034 TCCGTATATGTGATAACGCGG 57.794 47.619 12.47 0.00 39.33 6.46
2346 4927 5.220154 GGAAATCCGTATATGTGATAACGCG 60.220 44.000 3.53 3.53 34.13 6.01
2347 4928 5.063060 GGGAAATCCGTATATGTGATAACGC 59.937 44.000 0.00 0.00 36.71 4.84
2348 4929 6.642683 GGGAAATCCGTATATGTGATAACG 57.357 41.667 0.00 0.00 36.71 3.18
2363 4944 0.461339 TAGCGCTTGTCGGGAAATCC 60.461 55.000 18.68 0.00 38.94 3.01
2364 4945 1.583054 ATAGCGCTTGTCGGGAAATC 58.417 50.000 18.68 0.00 38.94 2.17
2365 4946 2.364324 TCTATAGCGCTTGTCGGGAAAT 59.636 45.455 18.68 1.17 38.94 2.17
2366 4947 1.752498 TCTATAGCGCTTGTCGGGAAA 59.248 47.619 18.68 0.00 38.94 3.13
2367 4948 1.395635 TCTATAGCGCTTGTCGGGAA 58.604 50.000 18.68 0.00 38.94 3.97
2368 4949 1.269723 CATCTATAGCGCTTGTCGGGA 59.730 52.381 18.68 6.44 38.94 5.14
2369 4950 1.269723 TCATCTATAGCGCTTGTCGGG 59.730 52.381 18.68 1.86 38.94 5.14
2370 4951 2.706555 TCATCTATAGCGCTTGTCGG 57.293 50.000 18.68 1.26 38.94 4.79
2371 4952 5.453909 GTGATATCATCTATAGCGCTTGTCG 59.546 44.000 18.68 1.82 34.76 4.35
2372 4953 6.252441 GTGTGATATCATCTATAGCGCTTGTC 59.748 42.308 18.68 2.88 37.74 3.18
2373 4954 6.071672 AGTGTGATATCATCTATAGCGCTTGT 60.072 38.462 18.68 7.88 37.74 3.16
2374 4955 6.328714 AGTGTGATATCATCTATAGCGCTTG 58.671 40.000 18.68 7.63 37.74 4.01
2375 4956 6.522625 AGTGTGATATCATCTATAGCGCTT 57.477 37.500 18.68 6.25 37.74 4.68
2376 4957 6.826231 ACTAGTGTGATATCATCTATAGCGCT 59.174 38.462 17.26 17.26 37.74 5.92
2377 4958 7.022055 ACTAGTGTGATATCATCTATAGCGC 57.978 40.000 9.02 0.00 37.45 5.92
2378 4959 9.535878 TCTACTAGTGTGATATCATCTATAGCG 57.464 37.037 9.02 6.15 0.00 4.26
2384 4965 9.647918 TCCTTTTCTACTAGTGTGATATCATCT 57.352 33.333 9.02 12.58 0.00 2.90
2385 4966 9.906660 CTCCTTTTCTACTAGTGTGATATCATC 57.093 37.037 9.02 5.78 0.00 2.92
2386 4967 8.865090 CCTCCTTTTCTACTAGTGTGATATCAT 58.135 37.037 9.02 0.00 0.00 2.45
2387 4968 7.201920 GCCTCCTTTTCTACTAGTGTGATATCA 60.202 40.741 5.39 0.00 0.00 2.15
2388 4969 7.014808 AGCCTCCTTTTCTACTAGTGTGATATC 59.985 40.741 5.39 0.00 0.00 1.63
2389 4970 6.841755 AGCCTCCTTTTCTACTAGTGTGATAT 59.158 38.462 5.39 0.00 0.00 1.63
2390 4971 6.195700 AGCCTCCTTTTCTACTAGTGTGATA 58.804 40.000 5.39 0.00 0.00 2.15
2391 4972 5.026790 AGCCTCCTTTTCTACTAGTGTGAT 58.973 41.667 5.39 0.00 0.00 3.06
2392 4973 4.417437 AGCCTCCTTTTCTACTAGTGTGA 58.583 43.478 5.39 0.71 0.00 3.58
2393 4974 4.810191 AGCCTCCTTTTCTACTAGTGTG 57.190 45.455 5.39 0.00 0.00 3.82
2410 4991 4.351054 CGGCCTGGACCAAAGCCT 62.351 66.667 25.43 0.00 43.48 4.58
2441 5022 2.235891 GGTTTTGAACTGAACCGGGAT 58.764 47.619 6.32 0.00 36.31 3.85
2454 5035 3.164268 CATCCATTGGTCCTGGTTTTGA 58.836 45.455 1.86 0.00 35.19 2.69
2473 5054 1.946768 CACGAACCGGGATAAATGCAT 59.053 47.619 6.32 0.00 28.17 3.96
2542 5123 1.546589 TTAGTCCCGGTTCGTGGCAT 61.547 55.000 0.00 0.00 0.00 4.40
2596 5177 4.220602 GGTCTAACCTTTAGTACCGGTTGA 59.779 45.833 15.04 0.00 40.94 3.18
2624 5205 2.148723 TTGATGGCACCAACCGGGAT 62.149 55.000 6.32 0.00 41.15 3.85
2640 5221 0.912487 AGCCCATTAGTCCCGGTTGA 60.912 55.000 0.00 0.00 0.00 3.18
2662 5243 3.541632 CATGAACCGGTACTAATGCCTT 58.458 45.455 8.00 0.00 0.00 4.35
2731 5318 1.612676 AACTAAAAAGGCGGTCCACC 58.387 50.000 0.00 0.00 33.74 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.